BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00014875
         (609 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS68986.1| hypothetical protein M569_05781, partial [Genlise...   324   1e-86
ref|XP_006344988.1| PREDICTED: pentatricopeptide repeat-containi...   302   5e-80
ref|XP_004236160.1| PREDICTED: pentatricopeptide repeat-containi...   300   3e-79
gb|EXB29767.1| hypothetical protein L484_008930 [Morus notabilis]     294   1e-77
ref|XP_002511477.1| pentatricopeptide repeat-containing protein,...   292   4e-77
ref|XP_002322139.2| hypothetical protein POPTR_0015s08030g [Popu...   290   2e-76
ref|XP_004508810.1| PREDICTED: pentatricopeptide repeat-containi...   288   8e-76
ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis...   287   1e-75
ref|XP_006390383.1| hypothetical protein EUTSA_v10018112mg [Eutr...   287   2e-75
ref|XP_004301287.1| PREDICTED: pentatricopeptide repeat-containi...   286   2e-75
ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arab...   286   3e-75
ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containi...   285   5e-75
ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containi...   285   5e-75
ref|XP_006300609.1| hypothetical protein CARUB_v10019779mg [Caps...   285   9e-75
ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containi...   284   1e-74
gb|EOY20557.1| Plastid transcriptionally active 2 isoform 3 [The...   282   4e-74
gb|EOY20556.1| Plastid transcriptionally active 2 isoform 2 [The...   282   4e-74
gb|EOY20555.1| Plastid transcriptionally active 2 isoform 1 [The...   282   4e-74
gb|EMJ11568.1| hypothetical protein PRUPE_ppa001337mg [Prunus pe...   280   2e-73
ref|XP_006476695.1| PREDICTED: pentatricopeptide repeat-containi...   280   3e-73

>gb|EPS68986.1| hypothetical protein M569_05781, partial [Genlisea aurea]
          Length = 574

 Score =  324 bits (830), Expect = 1e-86
 Identities = 159/194 (81%), Positives = 174/194 (89%)
 Frame = -2

Query: 584 PILRRSLSIVSKAKTRELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDAFK 405
           P+LRRSL++V+K+KT+ELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCL+ FK
Sbjct: 3   PVLRRSLAVVAKSKTKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLETFK 62

Query: 404 NKLSLSDFSHVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYSXXXXXXXXXXXLDKS 225
           +K+SLSDFS VFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYS           LDK+
Sbjct: 63  SKVSLSDFSSVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYSLIIGILGREGLLDKA 122

Query: 224 AEIFDEMVTHTVSRTVLSYTAIINAYGRNGQYEAALELLERMKSERILPNILTYNTVINA 45
           AEIFDEM  ++V RTVLSYTAIINAYGRNGQYE A+ELLERMK ER+LPN LTYNTVINA
Sbjct: 123 AEIFDEMPANSVPRTVLSYTAIINAYGRNGQYETAIELLERMKRERVLPNYLTYNTVINA 182

Query: 44  CARGGYSWEGLLSL 3
           C+RGGY WEGLLSL
Sbjct: 183 CSRGGYPWEGLLSL 196



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 38/154 (24%), Positives = 68/154 (44%)
 Frame = -2

Query: 491 YSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLSDFSHVFKEFAQRGDWQRSLRLFKYM 312
           Y Y VET   KL  L     +   ++   +   ++ ++ + + +A+ G  + ++ +F+ M
Sbjct: 247 YRYLVETFA-KLGKLEKVSELFGEMEVAGSLPEVTSYNVLLEAYARSGSTKEAMAVFRQM 305

Query: 311 QRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEIFDEMVTHTVSRTVLSYTAIINAYGRNGQ 132
           Q    C PN   Y             D+  ++F EM          SY  +I  +G  G 
Sbjct: 306 QTA-GCIPNAATYGILLNLFGKSGRYDEVRDLFLEMKVSDTDPDAGSYNILIQVFGEGGY 364

Query: 131 YEAALELLERMKSERILPNILTYNTVINACARGG 30
           ++ A+ L   M  E + PN+ TY  ++ AC +GG
Sbjct: 365 FKEAVALFHDMVEENVEPNMETYEGLVRACGKGG 398


>ref|XP_006344988.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Solanum tuberosum]
          Length = 860

 Score =  302 bits (773), Expect = 5e-80
 Identities = 148/191 (77%), Positives = 164/191 (85%)
 Frame = -2

Query: 575 RRSLSIVSKAKTRELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDAFKNKL 396
           R  L++  +AK ++LILGNP+VTVEKGKYSYDVETLINKLSSLPPRGSIARCLD FKNKL
Sbjct: 39  RLLLTVAVRAKPKDLILGNPTVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDTFKNKL 98

Query: 395 SLSDFSHVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEI 216
           SLSDFS VFKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIY+           LDK+ EI
Sbjct: 99  SLSDFSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTLMIGILGREGLLDKAFEI 158

Query: 215 FDEMVTHTVSRTVLSYTAIINAYGRNGQYEAALELLERMKSERILPNILTYNTVINACAR 36
           FDEM TH+V+RTV SYTAIINAYGRNGQYE +L+LLE+MK E I+P+ILTYNTVIN+CAR
Sbjct: 159 FDEMSTHSVARTVFSYTAIINAYGRNGQYETSLQLLEKMKQENIVPSILTYNTVINSCAR 218

Query: 35  GGYSWEGLLSL 3
           GGY WEGLL L
Sbjct: 219 GGYEWEGLLGL 229



 Score = 65.9 bits (159), Expect = 8e-09
 Identities = 44/163 (26%), Positives = 72/163 (44%)
 Frame = -2

Query: 518 PSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLSDFSHVFKEFAQRGDWQ 339
           P VT     YSY VET   KL  L     +   ++A      ++ ++ + + +A  G  +
Sbjct: 275 PDVTT----YSYLVETF-GKLGKLEKVSELLMEMEAGGTSPEVTSYNVLLEAYAHLGSMK 329

Query: 338 RSLRLFKYMQRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEIFDEMVTHTVSRTVLSYTAI 159
            ++ +F+ MQ    C  N   YS            D+  E+F EM T        +Y  +
Sbjct: 330 EAMDVFRQMQAA-GCVANAETYSILLNLYGKNGRYDQVRELFLEMKTSNTEPDADTYNIL 388

Query: 158 INAYGRNGQYEAALELLERMKSERILPNILTYNTVINACARGG 30
           I  +G  G ++  + L   M  E++ PN+ TY  +I AC +GG
Sbjct: 389 IQVFGEGGYFKEVVTLFHDMVEEKVEPNMETYEGLIYACGKGG 431


>ref|XP_004236160.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Solanum lycopersicum]
          Length = 860

 Score =  300 bits (767), Expect = 3e-79
 Identities = 148/201 (73%), Positives = 168/201 (83%), Gaps = 2/201 (0%)
 Frame = -2

Query: 599 HHHPFPILRRSL--SIVSKAKTRELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIA 426
           +++  P L R L  ++  +AK ++LILGNP+VTVEKGKYSYDVETLINKLSSLPPRGSIA
Sbjct: 29  NYYKLPGLHRRLLLTVAVRAKPKDLILGNPTVTVEKGKYSYDVETLINKLSSLPPRGSIA 88

Query: 425 RCLDAFKNKLSLSDFSHVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYSXXXXXXXX 246
           RCLD FKNKLSL+DFS VFKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIY+        
Sbjct: 89  RCLDTFKNKLSLTDFSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTLMIGILGR 148

Query: 245 XXXLDKSAEIFDEMVTHTVSRTVLSYTAIINAYGRNGQYEAALELLERMKSERILPNILT 66
              LDK+ EIFDEM TH V+RTV SYTAIIN+YGRNGQYE +L+LLE+MK E I+P+ILT
Sbjct: 149 EGLLDKAFEIFDEMSTHNVARTVFSYTAIINSYGRNGQYETSLQLLEKMKQENIVPSILT 208

Query: 65  YNTVINACARGGYSWEGLLSL 3
           YNTVIN+CARGGY WEGLL L
Sbjct: 209 YNTVINSCARGGYEWEGLLGL 229



 Score = 65.9 bits (159), Expect = 8e-09
 Identities = 44/163 (26%), Positives = 72/163 (44%)
 Frame = -2

Query: 518 PSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLSDFSHVFKEFAQRGDWQ 339
           P VT     YSY VET   KL  L     +   ++A      ++ ++ + + +A  G  +
Sbjct: 275 PDVTT----YSYLVETF-GKLGKLEKVSELLMEMEAGGTSPEVTSYNVLLEAYAHLGSMK 329

Query: 338 RSLRLFKYMQRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEIFDEMVTHTVSRTVLSYTAI 159
            ++ +F+ MQ    C  N   YS            D+  E+F EM T        +Y  +
Sbjct: 330 EAMDVFRQMQAA-GCVANAETYSILLNLYGKNGRYDQVRELFLEMKTSNTEPDADTYNIL 388

Query: 158 INAYGRNGQYEAALELLERMKSERILPNILTYNTVINACARGG 30
           I  +G  G ++  + L   M  E++ PN+ TY  +I AC +GG
Sbjct: 389 IQVFGEGGYFKEVVTLFHDMVEEKVEPNMETYEGLIYACGKGG 431


>gb|EXB29767.1| hypothetical protein L484_008930 [Morus notabilis]
          Length = 905

 Score =  294 bits (753), Expect = 1e-77
 Identities = 146/191 (76%), Positives = 163/191 (85%)
 Frame = -2

Query: 575 RRSLSIVSKAKTRELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDAFKNKL 396
           RRS S+  +AK +E+ILGNP+VTVEKGKYSYDVETLINKLSSLPPRGSIARCLD FKNKL
Sbjct: 63  RRSFSV--RAKPKEVILGNPAVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNKL 120

Query: 395 SLSDFSHVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEI 216
           SL+DF+ VFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIY+           LDKSAEI
Sbjct: 121 SLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKSAEI 180

Query: 215 FDEMVTHTVSRTVLSYTAIINAYGRNGQYEAALELLERMKSERILPNILTYNTVINACAR 36
           FDEM +  V R+V SYTA+INAYGRNGQYE +L+LL+RMK +++ PNILTYNTVINACAR
Sbjct: 181 FDEMPSQGVVRSVFSYTALINAYGRNGQYETSLQLLDRMKKDKVSPNILTYNTVINACAR 240

Query: 35  GGYSWEGLLSL 3
           GG  WEGLL L
Sbjct: 241 GGLDWEGLLGL 251



 Score = 62.8 bits (151), Expect = 7e-08
 Identities = 39/154 (25%), Positives = 69/154 (44%)
 Frame = -2

Query: 491 YSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLSDFSHVFKEFAQRGDWQRSLRLFKYM 312
           YS  VET   KL  L     + + +++  N   ++ ++ + + +A+ G    ++ +F+ M
Sbjct: 302 YSCLVETF-GKLGKLEKVSELLKEMESRGNLPDITSYNVLLEAYAESGSISEAVGVFRQM 360

Query: 311 QRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEIFDEMVTHTVSRTVLSYTAIINAYGRNGQ 132
           Q    C PN + YS            +   E+F EM          +Y  +I  +G  G 
Sbjct: 361 QTA-GCLPNANTYSILLNLYGKQGRYEDVRELFLEMKVSNTEPDAATYNILIQVFGEGGY 419

Query: 131 YEAALELLERMKSERILPNILTYNTVINACARGG 30
           ++  + L   M  E + PN+ TY  +I AC +GG
Sbjct: 420 FKEVVTLFHDMVEENVEPNMETYEGLIIACGKGG 453


>ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550592|gb|EEF52079.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 754

 Score =  292 bits (748), Expect = 4e-77
 Identities = 141/184 (76%), Positives = 161/184 (87%)
 Frame = -2

Query: 554 SKAKTRELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLSDFSH 375
           ++AKT+EL+LGNPSV VEKGKYSYDVETLINKLSSLPPRGSIARCL+ FKNKLSL+DF+ 
Sbjct: 52  ARAKTKELVLGNPSVVVEKGKYSYDVETLINKLSSLPPRGSIARCLEIFKNKLSLNDFAL 111

Query: 374 VFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEIFDEMVTH 195
           VFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIY+           L+KS EIF+EM TH
Sbjct: 112 VFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKSTEIFEEMPTH 171

Query: 194 TVSRTVLSYTAIINAYGRNGQYEAALELLERMKSERILPNILTYNTVINACARGGYSWEG 15
            V R+V SYTA+IN+YGR+GQYE +LELLERMK E++ P+ILTYNTVIN+CARGG +WEG
Sbjct: 172 GVPRSVFSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINSCARGGLNWEG 231

Query: 14  LLSL 3
           LLSL
Sbjct: 232 LLSL 235



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 6/166 (3%)
 Frame = -2

Query: 509 TVEKGKYSYDVETLIN------KLSSLPPRGSIARCLDAFKNKLSLSDFSHVFKEFAQRG 348
           T+ +G    D+ T  N      KL+ L     + + +++  N   +S ++ + + +A +G
Sbjct: 273 TMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKG 332

Query: 347 DWQRSLRLFKYMQRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEIFDEMVTHTVSRTVLSY 168
           D + ++ +F+ MQ +  C PN   YS            D   E+F EM        V +Y
Sbjct: 333 DIRHAMGVFRQMQ-EARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTY 391

Query: 167 TAIINAYGRNGQYEAALELLERMKSERILPNILTYNTVINACARGG 30
             +I  +G  G ++  + L   M  E + PN+ TY  +I AC +GG
Sbjct: 392 NVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGG 437


>ref|XP_002322139.2| hypothetical protein POPTR_0015s08030g [Populus trichocarpa]
           gi|550322283|gb|EEF06266.2| hypothetical protein
           POPTR_0015s08030g [Populus trichocarpa]
          Length = 866

 Score =  290 bits (743), Expect = 2e-76
 Identities = 148/213 (69%), Positives = 168/213 (78%), Gaps = 14/213 (6%)
 Frame = -2

Query: 599 HHHPFPIL---RRSLSIVS-----------KAKTRELILGNPSVTVEKGKYSYDVETLIN 462
           H  PFPIL   RR +S  S           +AK +EL+LGNPSV VEKGKYSYDVETLIN
Sbjct: 24  HTFPFPILPSHRRLVSFSSDRKAYSGAWKARAKPKELVLGNPSVVVEKGKYSYDVETLIN 83

Query: 461 KLSSLPPRGSIARCLDAFKNKLSLSDFSHVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNE 282
           KLSSLPPRGSIARCLD FKNKLSL+DF+ VFKEFAQRGDWQRSLRLFK+MQRQIWCKPNE
Sbjct: 84  KLSSLPPRGSIARCLDVFKNKLSLNDFALVFKEFAQRGDWQRSLRLFKHMQRQIWCKPNE 143

Query: 281 HIYSXXXXXXXXXXXLDKSAEIFDEMVTHTVSRTVLSYTAIINAYGRNGQYEAALELLER 102
           HIY+           L+K ++IF+EM  H VSR+V SYTA+IN+YGRNG+YE +LELLER
Sbjct: 144 HIYTIMISLLGREGLLEKCSDIFEEMGAHGVSRSVFSYTALINSYGRNGKYEVSLELLER 203

Query: 101 MKSERILPNILTYNTVINACARGGYSWEGLLSL 3
           MK ER+ P+ILTYNTVIN+CARGG  WEGLL L
Sbjct: 204 MKKERVSPSILTYNTVINSCARGGLDWEGLLGL 236



 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 40/154 (25%), Positives = 73/154 (47%)
 Frame = -2

Query: 491 YSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLSDFSHVFKEFAQRGDWQRSLRLFKYM 312
           Y+Y V+T   KL+ L     + + + +  N   +S ++ + + +A+ G+ + +  +F+ M
Sbjct: 287 YTYLVDTF-GKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLM 345

Query: 311 QRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEIFDEMVTHTVSRTVLSYTAIINAYGRNGQ 132
           Q +  C PN   YS            D+  E+F EM          +Y  +I+ +G  G 
Sbjct: 346 Q-EAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGY 404

Query: 131 YEAALELLERMKSERILPNILTYNTVINACARGG 30
           ++  + L   M  E + PN+ TY  +I AC +GG
Sbjct: 405 FKEVVTLFHDMAEENVEPNMETYEGLIFACGKGG 438


>ref|XP_004508810.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Cicer arietinum]
          Length = 861

 Score =  288 bits (737), Expect = 8e-76
 Identities = 140/191 (73%), Positives = 159/191 (83%)
 Frame = -2

Query: 575 RRSLSIVSKAKTRELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDAFKNKL 396
           +  L   ++AK RELILGNPSVTVE GKYSYDVETLIN+LSSLPPRGSIARCLD+FKNKL
Sbjct: 41  QHKLQFKARAKPRELILGNPSVTVESGKYSYDVETLINRLSSLPPRGSIARCLDSFKNKL 100

Query: 395 SLSDFSHVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEI 216
           SL+DFS VFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIY+           LDK  E+
Sbjct: 101 SLNDFSVVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMITLLGREGLLDKCREV 160

Query: 215 FDEMVTHTVSRTVLSYTAIINAYGRNGQYEAALELLERMKSERILPNILTYNTVINACAR 36
           FDEM +  V R+V +YTA+INAYGRNGQ++ ++ELL+RMK ER+ P+ILTYNTVINACAR
Sbjct: 161 FDEMPSQGVPRSVFAYTAVINAYGRNGQFQTSVELLDRMKQERVSPSILTYNTVINACAR 220

Query: 35  GGYSWEGLLSL 3
           GG  WEGLL L
Sbjct: 221 GGLDWEGLLGL 231



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 41/154 (26%), Positives = 70/154 (45%)
 Frame = -2

Query: 491 YSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLSDFSHVFKEFAQRGDWQRSLRLFKYM 312
           YSY V T   KL+ L     + R +++  N   +S ++ + + +A+ G  + ++ +F+ M
Sbjct: 282 YSYLVHTF-GKLNKLEKVSELLREMESGGNLPDVSSYNVLLEAYAESGSIKDAIGVFRQM 340

Query: 311 QRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEIFDEMVTHTVSRTVLSYTAIINAYGRNGQ 132
           Q    C PN   YS            D   ++F EM          +Y  +I  +G  G 
Sbjct: 341 QGA-GCVPNAATYSILLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGY 399

Query: 131 YEAALELLERMKSERILPNILTYNTVINACARGG 30
           ++  + L   M  E + PN+ TY  +I AC +GG
Sbjct: 400 FKEVVTLFHDMVDENVEPNMETYEGLIFACGKGG 433


>ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
           gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g74850, chloroplastic; AltName: Full=Protein PLASTID
           TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
           gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535
           DUF17 domains [Arabidopsis thaliana]
           gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical
           protein; 81052-84129 [Arabidopsis thaliana]
           gi|332197518|gb|AEE35639.1| plastid transcriptionally
           active 2 [Arabidopsis thaliana]
          Length = 862

 Score =  287 bits (735), Expect = 1e-75
 Identities = 140/183 (76%), Positives = 158/183 (86%)
 Frame = -2

Query: 551 KAKTRELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLSDFSHV 372
           KAKT++L+LGNPSV+VEKGKYSYDVE+LINKLSSLPPRGSIARCLD FKNKLSL+DF+ V
Sbjct: 52  KAKTKDLVLGNPSVSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALV 111

Query: 371 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEIFDEMVTHT 192
           FKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIY+           LDK  E+FDEM +  
Sbjct: 112 FKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQG 171

Query: 191 VSRTVLSYTAIINAYGRNGQYEAALELLERMKSERILPNILTYNTVINACARGGYSWEGL 12
           VSR+V SYTA+INAYGRNG+YE +LELL+RMK+E+I P+ILTYNTVINACARGG  WEGL
Sbjct: 172 VSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGL 231

Query: 11  LSL 3
           L L
Sbjct: 232 LGL 234



 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 38/154 (24%), Positives = 69/154 (44%)
 Frame = -2

Query: 491 YSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLSDFSHVFKEFAQRGDWQRSLRLFKYM 312
           YS+ VET   KL  L     +   + +  +   ++ ++ + + +A+ G  + ++ +F  M
Sbjct: 285 YSHLVETF-GKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM 343

Query: 311 QRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEIFDEMVTHTVSRTVLSYTAIINAYGRNGQ 132
           Q    C PN + YS            D   ++F EM +        +Y  +I  +G  G 
Sbjct: 344 QAA-GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGY 402

Query: 131 YEAALELLERMKSERILPNILTYNTVINACARGG 30
           ++  + L   M  E I P++ TY  +I AC +GG
Sbjct: 403 FKEVVTLFHDMVEENIEPDMETYEGIIFACGKGG 436


>ref|XP_006390383.1| hypothetical protein EUTSA_v10018112mg [Eutrema salsugineum]
           gi|557086817|gb|ESQ27669.1| hypothetical protein
           EUTSA_v10018112mg [Eutrema salsugineum]
          Length = 863

 Score =  287 bits (734), Expect = 2e-75
 Identities = 142/189 (75%), Positives = 161/189 (85%)
 Frame = -2

Query: 569 SLSIVSKAKTRELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDAFKNKLSL 390
           SL+   KAKT++L+LGNPSV+VEKGKYSYDVE+LINKLSSLPPRGSIARCLD FKNKLSL
Sbjct: 45  SLAGKIKAKTKDLVLGNPSVSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSL 104

Query: 389 SDFSHVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEIFD 210
           +DF+ VFKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIY+           LDK  EIFD
Sbjct: 105 NDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEIFD 164

Query: 209 EMVTHTVSRTVLSYTAIINAYGRNGQYEAALELLERMKSERILPNILTYNTVINACARGG 30
           EM +  V+R+V SYTA+INAYGRNG+YE +LELL+RMK+E+I P+ILTYNTVINACARGG
Sbjct: 165 EMPSQGVARSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGG 224

Query: 29  YSWEGLLSL 3
             WEGLL L
Sbjct: 225 LDWEGLLGL 233



 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 39/154 (25%), Positives = 70/154 (45%)
 Frame = -2

Query: 491 YSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLSDFSHVFKEFAQRGDWQRSLRLFKYM 312
           YS+ VET   KLS L     +   + +  +   ++ ++ + + +A+ G  + ++ +F  M
Sbjct: 284 YSHLVETF-GKLSRLVKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM 342

Query: 311 QRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEIFDEMVTHTVSRTVLSYTAIINAYGRNGQ 132
           Q    C PN + YS            D   ++F EM +        +Y  +I  +G  G 
Sbjct: 343 QAA-GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGY 401

Query: 131 YEAALELLERMKSERILPNILTYNTVINACARGG 30
           ++  + L   M  E I P++ TY  +I AC +GG
Sbjct: 402 FKEVVTLFHDMVEENIEPDMETYEGIIFACGKGG 435


>ref|XP_004301287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 862

 Score =  286 bits (733), Expect = 2e-75
 Identities = 141/188 (75%), Positives = 158/188 (84%)
 Frame = -2

Query: 566 LSIVSKAKTRELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLS 387
           LS   +AK ++LILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLD FKNKLSL+
Sbjct: 44  LSFSVRAKPKDLILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNKLSLN 103

Query: 386 DFSHVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEIFDE 207
           DF+ VFKEFA RGDWQRSLRLFKYMQRQIWCKP+EHIY+           LDK AEIFDE
Sbjct: 104 DFALVFKEFAARGDWQRSLRLFKYMQRQIWCKPSEHIYTIMISLLGREGLLDKCAEIFDE 163

Query: 206 MVTHTVSRTVLSYTAIINAYGRNGQYEAALELLERMKSERILPNILTYNTVINACARGGY 27
           M T  V R+V SYTA+INAYGRNGQ+E +L+LL+RMK +++ PNILTYNTV+NACARGG 
Sbjct: 164 MPTQGVIRSVFSYTALINAYGRNGQFEMSLQLLDRMKKDKVSPNILTYNTVLNACARGGL 223

Query: 26  SWEGLLSL 3
            WEGLL L
Sbjct: 224 DWEGLLGL 231



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 42/154 (27%), Positives = 71/154 (46%)
 Frame = -2

Query: 491 YSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLSDFSHVFKEFAQRGDWQRSLRLFKYM 312
           YSY VET   KL++L     + + +++  N   ++ ++ + + +AQ G  + ++ +F+ M
Sbjct: 282 YSYLVETF-GKLNNLEKVSELLKGMESGGNLPDITSYNVLLEAYAQLGSIKEAMGVFRQM 340

Query: 311 QRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEIFDEMVTHTVSRTVLSYTAIINAYGRNGQ 132
           Q +  C  N   YS            D   E+F EM          +Y  +I  +G  G 
Sbjct: 341 Q-EAGCMANAATYSILLNLYGRLGRYDDVRELFLEMKVSNAEPDAATYNILIQVFGEGGY 399

Query: 131 YEAALELLERMKSERILPNILTYNTVINACARGG 30
           +   + L   M  E I PN+ TY  +I AC +GG
Sbjct: 400 FREVVTLFHDMVEENIEPNMETYEGLIYACGKGG 433


>ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
           lyrata] gi|297334836|gb|EFH65254.1| hypothetical protein
           ARALYDRAFT_476621 [Arabidopsis lyrata subsp. lyrata]
          Length = 863

 Score =  286 bits (732), Expect = 3e-75
 Identities = 139/183 (75%), Positives = 158/183 (86%)
 Frame = -2

Query: 551 KAKTRELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLSDFSHV 372
           KAKT++L+LGNPSV+VEKGKYSYDVE+LINKLSSLPPRGSIARCLD FKNKLSL+DF+ V
Sbjct: 52  KAKTKDLVLGNPSVSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALV 111

Query: 371 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEIFDEMVTHT 192
           FKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIY+           LDK  E+FDEM +  
Sbjct: 112 FKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQG 171

Query: 191 VSRTVLSYTAIINAYGRNGQYEAALELLERMKSERILPNILTYNTVINACARGGYSWEGL 12
           VSR+V SYTA+INAYGRNG+YE +LELL+RMK+++I P+ILTYNTVINACARGG  WEGL
Sbjct: 172 VSRSVFSYTALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVINACARGGLDWEGL 231

Query: 11  LSL 3
           L L
Sbjct: 232 LGL 234



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 38/154 (24%), Positives = 69/154 (44%)
 Frame = -2

Query: 491 YSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLSDFSHVFKEFAQRGDWQRSLRLFKYM 312
           YS+ VET   KL  L     +   + +  +   ++ ++ + + +A+ G  + ++ +F  M
Sbjct: 285 YSHLVETF-GKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM 343

Query: 311 QRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEIFDEMVTHTVSRTVLSYTAIINAYGRNGQ 132
           Q    C PN + YS            D   ++F EM +        +Y  +I  +G  G 
Sbjct: 344 QAA-GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGY 402

Query: 131 YEAALELLERMKSERILPNILTYNTVINACARGG 30
           ++  + L   M  E I P++ TY  +I AC +GG
Sbjct: 403 FKEVVTLFHDMVEENIEPDMETYEGIIFACGKGG 436


>ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Cucumis sativus]
          Length = 864

 Score =  285 bits (730), Expect = 5e-75
 Identities = 140/183 (76%), Positives = 154/183 (84%)
 Frame = -2

Query: 551 KAKTRELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLSDFSHV 372
           +AK ++L+LGNPSV VEKGKYSYDVETLINKLSSLPPRGSIARCLD FKN+LSL+DFS V
Sbjct: 59  RAKAKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLV 118

Query: 371 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEIFDEMVTHT 192
           FKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIY+           L+K +EIFDEM +  
Sbjct: 119 FKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQG 178

Query: 191 VSRTVLSYTAIINAYGRNGQYEAALELLERMKSERILPNILTYNTVINACARGGYSWEGL 12
           V R+V SYTA+INAYGRNGQYE +LELLERMK ER+ PNILTYNTVINACARG   WEGL
Sbjct: 179 VIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGL 238

Query: 11  LSL 3
           L L
Sbjct: 239 LGL 241



 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 40/154 (25%), Positives = 69/154 (44%)
 Frame = -2

Query: 491 YSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLSDFSHVFKEFAQRGDWQRSLRLFKYM 312
           YSY VET   KL  L     + + +++      +S ++ + +  A+ G  + ++ +FK M
Sbjct: 292 YSYIVETF-GKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQM 350

Query: 311 QRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEIFDEMVTHTVSRTVLSYTAIINAYGRNGQ 132
           Q    C PN   YS            D   E+F +M   +      +Y  +I  +G  G 
Sbjct: 351 QAA-GCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGY 409

Query: 131 YEAALELLERMKSERILPNILTYNTVINACARGG 30
           ++  + L   +  E I PN+ TY  ++ AC +GG
Sbjct: 410 FKEVVTLFHDLVDENIDPNMETYEGLVFACGKGG 443


>ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Cucumis sativus]
          Length = 864

 Score =  285 bits (730), Expect = 5e-75
 Identities = 140/183 (76%), Positives = 154/183 (84%)
 Frame = -2

Query: 551 KAKTRELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLSDFSHV 372
           +AK ++L+LGNPSV VEKGKYSYDVETLINKLSSLPPRGSIARCLD FKN+LSL+DFS V
Sbjct: 59  RAKAKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLV 118

Query: 371 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEIFDEMVTHT 192
           FKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIY+           L+K +EIFDEM +  
Sbjct: 119 FKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQG 178

Query: 191 VSRTVLSYTAIINAYGRNGQYEAALELLERMKSERILPNILTYNTVINACARGGYSWEGL 12
           V R+V SYTA+INAYGRNGQYE +LELLERMK ER+ PNILTYNTVINACARG   WEGL
Sbjct: 179 VIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGL 238

Query: 11  LSL 3
           L L
Sbjct: 239 LGL 241



 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 40/154 (25%), Positives = 69/154 (44%)
 Frame = -2

Query: 491 YSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLSDFSHVFKEFAQRGDWQRSLRLFKYM 312
           YSY VET   KL  L     + + +++      +S ++ + +  A+ G  + ++ +FK M
Sbjct: 292 YSYIVETF-GKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQM 350

Query: 311 QRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEIFDEMVTHTVSRTVLSYTAIINAYGRNGQ 132
           Q    C PN   YS            D   E+F +M   +      +Y  +I  +G  G 
Sbjct: 351 QAA-GCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGY 409

Query: 131 YEAALELLERMKSERILPNILTYNTVINACARGG 30
           ++  + L   +  E I PN+ TY  ++ AC +GG
Sbjct: 410 FKEVVTLFHDLVDENIDPNMETYEGLVFACGKGG 443


>ref|XP_006300609.1| hypothetical protein CARUB_v10019779mg [Capsella rubella]
           gi|482569319|gb|EOA33507.1| hypothetical protein
           CARUB_v10019779mg [Capsella rubella]
          Length = 865

 Score =  285 bits (728), Expect = 9e-75
 Identities = 142/193 (73%), Positives = 160/193 (82%), Gaps = 2/193 (1%)
 Frame = -2

Query: 575 RRSLSIVSK--AKTRELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDAFKN 402
           RR  S+  K  AKT++L+LGNPSV+VEKGKYSYDVE+LINKLSSLPPRGSIARCLD FKN
Sbjct: 42  RRPCSVAGKIKAKTKDLVLGNPSVSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKN 101

Query: 401 KLSLSDFSHVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYSXXXXXXXXXXXLDKSA 222
           KLSL+DF+ VFKEFA R DWQRSLRLFKYMQRQIWCKPNEHIY+           LDK  
Sbjct: 102 KLSLNDFALVFKEFAGRSDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCL 161

Query: 221 EIFDEMVTHTVSRTVLSYTAIINAYGRNGQYEAALELLERMKSERILPNILTYNTVINAC 42
           E+FDEM    VSR+V SYTA+INAYGRNG+YE +LELL+RMK+E+I P+ILTYNTVINAC
Sbjct: 162 EVFDEMPGQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINAC 221

Query: 41  ARGGYSWEGLLSL 3
           ARGG  WEGLL L
Sbjct: 222 ARGGLDWEGLLGL 234



 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 39/154 (25%), Positives = 69/154 (44%)
 Frame = -2

Query: 491 YSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLSDFSHVFKEFAQRGDWQRSLRLFKYM 312
           YS+ VET   KL  L     +   + +  +   ++ ++ + + +A+ G  + S+ +F  M
Sbjct: 285 YSHLVETF-GKLGRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKESMGVFHQM 343

Query: 311 QRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEIFDEMVTHTVSRTVLSYTAIINAYGRNGQ 132
           Q    C PN + YS            D   ++F EM +        +Y  +I  +G  G 
Sbjct: 344 QAA-GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGY 402

Query: 131 YEAALELLERMKSERILPNILTYNTVINACARGG 30
           ++  + L   M  E I P++ TY  +I AC +GG
Sbjct: 403 FKEVVTLFHDMVEENIEPDMETYEGIIFACGKGG 436


>ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic [Vitis vinifera]
          Length = 869

 Score =  284 bits (727), Expect = 1e-74
 Identities = 138/183 (75%), Positives = 157/183 (85%)
 Frame = -2

Query: 551 KAKTRELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLSDFSHV 372
           +AK +EL+LGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLD FKNKLSL+DF+ V
Sbjct: 57  RAKPKELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALV 116

Query: 371 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEIFDEMVTHT 192
           FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIY+           L+K  EIFDEM +H 
Sbjct: 117 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGVLGREGLLEKCQEIFDEMPSHG 176

Query: 191 VSRTVLSYTAIINAYGRNGQYEAALELLERMKSERILPNILTYNTVINACARGGYSWEGL 12
           V+ +V S+TA+INAYGRNGQY+++LELL+RMK ER+ P+ILTYNTVIN+CARGG  WE L
Sbjct: 177 VAPSVFSFTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGGLDWEEL 236

Query: 11  LSL 3
           L L
Sbjct: 237 LGL 239



 Score = 65.9 bits (159), Expect = 8e-09
 Identities = 41/154 (26%), Positives = 71/154 (46%)
 Frame = -2

Query: 491 YSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLSDFSHVFKEFAQRGDWQRSLRLFKYM 312
           YSY VET   KL+ L     + + +++  +   ++ ++ + +  AQ G  + ++ +F+ M
Sbjct: 290 YSYLVETF-GKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQM 348

Query: 311 QRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEIFDEMVTHTVSRTVLSYTAIINAYGRNGQ 132
           Q    C PN   YS            D   ++F EM          +Y  +IN +G  G 
Sbjct: 349 QGA-GCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGY 407

Query: 131 YEAALELLERMKSERILPNILTYNTVINACARGG 30
           ++  + L   M  E + PN+ TY  +I AC +GG
Sbjct: 408 FKEVVTLFHDMVEENVEPNMETYEGLIFACGKGG 441


>gb|EOY20557.1| Plastid transcriptionally active 2 isoform 3 [Theobroma cacao]
          Length = 811

 Score =  282 bits (722), Expect = 4e-74
 Identities = 135/185 (72%), Positives = 156/185 (84%)
 Frame = -2

Query: 557 VSKAKTRELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLSDFS 378
           + +AK REL+LGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLD F+NKLSL+DF+
Sbjct: 45  ICRAKPRELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFRNKLSLNDFA 104

Query: 377 HVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEIFDEMVT 198
            VFKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIY+           L+K  E+FDEM +
Sbjct: 105 LVFKEFAHRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCREVFDEMPS 164

Query: 197 HTVSRTVLSYTAIINAYGRNGQYEAALELLERMKSERILPNILTYNTVINACARGGYSWE 18
             V+R+V +YTA+INAYGRNG Y  +LELL++MK +++LP+ILTYNTVINACARGG  WE
Sbjct: 165 QGVTRSVFAYTALINAYGRNGAYNISLELLDKMKKDKVLPSILTYNTVINACARGGLDWE 224

Query: 17  GLLSL 3
           GLL L
Sbjct: 225 GLLGL 229



 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 42/154 (27%), Positives = 70/154 (45%)
 Frame = -2

Query: 491 YSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLSDFSHVFKEFAQRGDWQRSLRLFKYM 312
           YSY VE+   KL  L     + + +++  N   +  ++ + + +A+ G  + ++ +FK M
Sbjct: 280 YSYLVESF-GKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKEAMGVFKQM 338

Query: 311 QRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEIFDEMVTHTVSRTVLSYTAIINAYGRNGQ 132
           Q    C PN   YS            D   E+F EM          +Y  +I  +G  G 
Sbjct: 339 Q-VAGCAPNATTYSILLNLYGRNGRYDDVRELFLEMKESNTEPDAATYNILIQVFGEGGY 397

Query: 131 YEAALELLERMKSERILPNILTYNTVINACARGG 30
           ++  + L   M  E I PN+ TY+ +I AC +GG
Sbjct: 398 FKEVVTLFHDMVEENIEPNVKTYDGLIFACGKGG 431


>gb|EOY20556.1| Plastid transcriptionally active 2 isoform 2 [Theobroma cacao]
          Length = 770

 Score =  282 bits (722), Expect = 4e-74
 Identities = 135/185 (72%), Positives = 156/185 (84%)
 Frame = -2

Query: 557 VSKAKTRELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLSDFS 378
           + +AK REL+LGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLD F+NKLSL+DF+
Sbjct: 45  ICRAKPRELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFRNKLSLNDFA 104

Query: 377 HVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEIFDEMVT 198
            VFKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIY+           L+K  E+FDEM +
Sbjct: 105 LVFKEFAHRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCREVFDEMPS 164

Query: 197 HTVSRTVLSYTAIINAYGRNGQYEAALELLERMKSERILPNILTYNTVINACARGGYSWE 18
             V+R+V +YTA+INAYGRNG Y  +LELL++MK +++LP+ILTYNTVINACARGG  WE
Sbjct: 165 QGVTRSVFAYTALINAYGRNGAYNISLELLDKMKKDKVLPSILTYNTVINACARGGLDWE 224

Query: 17  GLLSL 3
           GLL L
Sbjct: 225 GLLGL 229



 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 42/154 (27%), Positives = 70/154 (45%)
 Frame = -2

Query: 491 YSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLSDFSHVFKEFAQRGDWQRSLRLFKYM 312
           YSY VE+   KL  L     + + +++  N   +  ++ + + +A+ G  + ++ +FK M
Sbjct: 280 YSYLVESF-GKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKEAMGVFKQM 338

Query: 311 QRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEIFDEMVTHTVSRTVLSYTAIINAYGRNGQ 132
           Q    C PN   YS            D   E+F EM          +Y  +I  +G  G 
Sbjct: 339 Q-VAGCAPNATTYSILLNLYGRNGRYDDVRELFLEMKESNTEPDAATYNILIQVFGEGGY 397

Query: 131 YEAALELLERMKSERILPNILTYNTVINACARGG 30
           ++  + L   M  E I PN+ TY+ +I AC +GG
Sbjct: 398 FKEVVTLFHDMVEENIEPNVKTYDGLIFACGKGG 431


>gb|EOY20555.1| Plastid transcriptionally active 2 isoform 1 [Theobroma cacao]
          Length = 859

 Score =  282 bits (722), Expect = 4e-74
 Identities = 135/185 (72%), Positives = 156/185 (84%)
 Frame = -2

Query: 557 VSKAKTRELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLSDFS 378
           + +AK REL+LGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLD F+NKLSL+DF+
Sbjct: 45  ICRAKPRELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFRNKLSLNDFA 104

Query: 377 HVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEIFDEMVT 198
            VFKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIY+           L+K  E+FDEM +
Sbjct: 105 LVFKEFAHRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCREVFDEMPS 164

Query: 197 HTVSRTVLSYTAIINAYGRNGQYEAALELLERMKSERILPNILTYNTVINACARGGYSWE 18
             V+R+V +YTA+INAYGRNG Y  +LELL++MK +++LP+ILTYNTVINACARGG  WE
Sbjct: 165 QGVTRSVFAYTALINAYGRNGAYNISLELLDKMKKDKVLPSILTYNTVINACARGGLDWE 224

Query: 17  GLLSL 3
           GLL L
Sbjct: 225 GLLGL 229



 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 42/154 (27%), Positives = 70/154 (45%)
 Frame = -2

Query: 491 YSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLSDFSHVFKEFAQRGDWQRSLRLFKYM 312
           YSY VE+   KL  L     + + +++  N   +  ++ + + +A+ G  + ++ +FK M
Sbjct: 280 YSYLVESF-GKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKEAMGVFKQM 338

Query: 311 QRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEIFDEMVTHTVSRTVLSYTAIINAYGRNGQ 132
           Q    C PN   YS            D   E+F EM          +Y  +I  +G  G 
Sbjct: 339 Q-VAGCAPNATTYSILLNLYGRNGRYDDVRELFLEMKESNTEPDAATYNILIQVFGEGGY 397

Query: 131 YEAALELLERMKSERILPNILTYNTVINACARGG 30
           ++  + L   M  E I PN+ TY+ +I AC +GG
Sbjct: 398 FKEVVTLFHDMVEENIEPNVKTYDGLIFACGKGG 431


>gb|EMJ11568.1| hypothetical protein PRUPE_ppa001337mg [Prunus persica]
          Length = 850

 Score =  280 bits (716), Expect = 2e-73
 Identities = 137/191 (71%), Positives = 159/191 (83%), Gaps = 3/191 (1%)
 Frame = -2

Query: 566 LSIVSK---AKTRELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDAFKNKL 396
           LS+V+K   +  ++LILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLD FKNKL
Sbjct: 29  LSVVTKTPDSSPKDLILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNKL 88

Query: 395 SLSDFSHVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEI 216
           SL+DF+ VFKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIY+           LDK +E+
Sbjct: 89  SLNDFALVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCSEV 148

Query: 215 FDEMVTHTVSRTVLSYTAIINAYGRNGQYEAALELLERMKSERILPNILTYNTVINACAR 36
           FD+M +  V R+V SYTA+INAYGRNGQYE +L+ L+RMK +++ P+ILTYNTV+NACAR
Sbjct: 149 FDDMPSQGVVRSVFSYTALINAYGRNGQYETSLQFLDRMKKDKVSPSILTYNTVLNACAR 208

Query: 35  GGYSWEGLLSL 3
           GG  WEGLL L
Sbjct: 209 GGLEWEGLLGL 219



 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 43/154 (27%), Positives = 69/154 (44%)
 Frame = -2

Query: 491 YSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLSDFSHVFKEFAQRGDWQRSLRLFKYM 312
           Y Y VET   KL  L     + + +++  N   ++ ++ + + +AQ G  + S+ +F+ M
Sbjct: 270 YRYLVETF-GKLDKLEKVSELLKEMESGGNLPDITSYNVLLEAYAQLGSIRESMGVFRQM 328

Query: 311 QRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEIFDEMVTHTVSRTVLSYTAIINAYGRNGQ 132
           Q    C PN   YS            D   E+F EM          +Y  +I  +G  G 
Sbjct: 329 QAA-GCMPNAATYSILLNLYGRHGRYDDVRELFLEMKISNTEPDPATYNILIQVFGEGGY 387

Query: 131 YEAALELLERMKSERILPNILTYNTVINACARGG 30
           ++  + L   M  E I PN+ TY  +I AC +GG
Sbjct: 388 FKEVVTLFHDMVEENIEPNMETYEGLIYACGKGG 421


>ref|XP_006476695.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Citrus sinensis]
          Length = 871

 Score =  280 bits (715), Expect = 3e-73
 Identities = 140/198 (70%), Positives = 162/198 (81%), Gaps = 3/198 (1%)
 Frame = -2

Query: 587 FPILRRSLS---IVSKAKTRELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCL 417
           F   RRSL+   +  +AK +EL+LG+P+VTVEKGKYSYDVETLINKLSSLPPRGSIARCL
Sbjct: 43  FTSRRRSLTSGTVQVRAKPKELVLGSPTVTVEKGKYSYDVETLINKLSSLPPRGSIARCL 102

Query: 416 DAFKNKLSLSDFSHVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYSXXXXXXXXXXX 237
           D FKNKLSL+DF+ VFKEFAQRGDWQRSLRLFKYMQRQIWCKP+E IY+           
Sbjct: 103 DMFKNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPSEQIYTIMISLLGRENL 162

Query: 236 LDKSAEIFDEMVTHTVSRTVLSYTAIINAYGRNGQYEAALELLERMKSERILPNILTYNT 57
           LDK++E+F+EM +  V R+V SYTA+INAYGR+GQYE +LELL+RMK E+I PNILTYNT
Sbjct: 163 LDKASEVFEEMPSQGVPRSVFSYTALINAYGRHGQYETSLELLDRMKREKIAPNILTYNT 222

Query: 56  VINACARGGYSWEGLLSL 3
           VINAC RGG  WE LL L
Sbjct: 223 VINACVRGGLDWEDLLGL 240



 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 39/154 (25%), Positives = 67/154 (43%)
 Frame = -2

Query: 491 YSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLSDFSHVFKEFAQRGDWQRSLRLFKYM 312
           +SY VET   KL  L     + R +++  N   ++ ++ + +  A+ G  + ++ +F+ M
Sbjct: 291 FSYLVETF-GKLGKLEKVSELLREMESGGNLPDVTCYNVLLEAHAKMGSIKEAMDVFRQM 349

Query: 311 QRQIWCKPNEHIYSXXXXXXXXXXXLDKSAEIFDEMVTHTVSRTVLSYTAIINAYGRNGQ 132
           Q       N   YS            D   E+F EM          +Y  +I  +G  G 
Sbjct: 350 QAA-GSVANATTYSILLNLYGRNGRYDDVRELFLEMKASNTEPNAATYNILIQVFGEGGY 408

Query: 131 YEAALELLERMKSERILPNILTYNTVINACARGG 30
           ++  + L   M  E + PN+ TY  +I AC +GG
Sbjct: 409 FKEVVTLFHDMVEENVEPNMETYEGLIFACGKGG 442