BLASTX nr result
ID: Rehmannia25_contig00014831
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00014831
(388 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008815998.1| Ycf2 (chloroplast) [Lindenbergia philippensi... 77 2e-12
ref|YP_008815981.1| Ycf2 (chloroplast) [Lindenbergia philippensi... 77 2e-12
ref|YP_008964078.1| hypothetical chloroplast RF2 [Ajuga reptans]... 76 5e-12
ref|YP_007353958.1| Ycf2 protein (chloroplast) [Tectona grandis]... 76 5e-12
gb|AFB74312.1| Ycf2 protein (chloroplast) [Portulaca oleracea] 76 5e-12
gb|AFB74306.1| Ycf2 protein (chloroplast) [Anredera baselloides] 76 5e-12
ref|YP_004935710.1| ycf2 gene product (chloroplast) [Sesamum ind... 76 5e-12
gb|AEK78264.1| hypothetical chloroplast RF2 [Portulaca oleracea] 76 5e-12
gb|AEK78225.1| hypothetical chloroplast RF2 [Halophytum ameghinoi] 76 5e-12
gb|AEK78208.1| hypothetical chloroplast RF2 [Claytonia virginica] 76 5e-12
gb|AEK78195.1| hypothetical chloroplast RF2 [Basella alba] 76 5e-12
gb|ADD30879.1| putative RF2 protein [Antirrhinum majus] gi|34080... 76 5e-12
gb|AGW97929.1| hypothetical chloroplast RF21 (chloroplast) [Ipom... 75 7e-12
gb|AGW97908.1| hypothetical chloroplast RF21 (chloroplast) [Ipom... 75 7e-12
gb|AGW97504.1| hypothetical chloroplast RF21 (chloroplast) [Ipom... 75 7e-12
gb|AGW97484.1| hypothetical chloroplast RF21 (chloroplast) [Ipom... 75 7e-12
ref|YP_007890282.1| Ycf2 protein (chloroplast) [Cistanche desert... 75 7e-12
gb|AEK78271.1| hypothetical chloroplast RF2 [Rivina humilis] 75 7e-12
gb|AEK78199.1| hypothetical chloroplast RF2 [Bougainvillea glabra] 75 7e-12
gb|AEK78183.1| hypothetical chloroplast RF2 [Gisekia africana] 75 7e-12
>ref|YP_008815998.1| Ycf2 (chloroplast) [Lindenbergia philippensis]
gi|557136925|emb|CDI43979.1| Ycf2 (chloroplast)
[Lindenbergia philippensis]
Length = 2274
Score = 77.0 bits (188), Expect = 2e-12
Identities = 40/49 (81%), Positives = 42/49 (85%), Gaps = 6/49 (12%)
Frame = -3
Query: 278 NGLCSH------SDLVHGLLEVEGALVGSSRTEKDCSPFENDRVTLLLR 150
NG+ S+ SDLVHGLLEVEGALVGSSRTEKDCSPFENDRVTLLLR
Sbjct: 1967 NGITSYGLVENDSDLVHGLLEVEGALVGSSRTEKDCSPFENDRVTLLLR 2015
>ref|YP_008815981.1| Ycf2 (chloroplast) [Lindenbergia philippensis]
gi|557136908|emb|CDI43962.1| Ycf2 (chloroplast)
[Lindenbergia philippensis]
Length = 2274
Score = 77.0 bits (188), Expect = 2e-12
Identities = 40/49 (81%), Positives = 42/49 (85%), Gaps = 6/49 (12%)
Frame = -3
Query: 278 NGLCSH------SDLVHGLLEVEGALVGSSRTEKDCSPFENDRVTLLLR 150
NG+ S+ SDLVHGLLEVEGALVGSSRTEKDCSPFENDRVTLLLR
Sbjct: 1967 NGITSYGLVENDSDLVHGLLEVEGALVGSSRTEKDCSPFENDRVTLLLR 2015
>ref|YP_008964078.1| hypothetical chloroplast RF2 [Ajuga reptans]
gi|568247135|ref|YP_008964094.1| hypothetical chloroplast
RF2 [Ajuga reptans] gi|558697199|gb|AHA84954.1|
hypothetical chloroplast RF2 [Ajuga reptans]
gi|558697206|gb|AHA84961.1| hypothetical chloroplast RF2
[Ajuga reptans]
Length = 2248
Score = 75.9 bits (185), Expect = 5e-12
Identities = 39/49 (79%), Positives = 42/49 (85%), Gaps = 6/49 (12%)
Frame = -3
Query: 278 NGLCSH------SDLVHGLLEVEGALVGSSRTEKDCSPFENDRVTLLLR 150
NG+ S+ SDLVHGLLEVEGALVGSSRTEKDCSPF+NDRVTLLLR
Sbjct: 1944 NGITSYGLVENDSDLVHGLLEVEGALVGSSRTEKDCSPFDNDRVTLLLR 1992
>ref|YP_007353958.1| Ycf2 protein (chloroplast) [Tectona grandis]
gi|442743025|ref|YP_007353977.1| Ycf2 protein
(chloroplast) [Tectona grandis]
gi|438687647|emb|CCP47174.1| YCF2 protein (chloroplast)
[Tectona grandis] gi|438687666|emb|CCP47196.1| ycf2
protein (chloroplast) [Tectona grandis]
gi|438688331|emb|CCP47263.1| YCF2 protein (chloroplast)
[Tectona grandis] gi|438688350|emb|CCP47285.1| ycf2
protein (chloroplast) [Tectona grandis]
gi|438688455|emb|CCP47352.1| YCF2 protein (chloroplast)
[Tectona grandis] gi|438688474|emb|CCP47374.1| ycf2
protein (chloroplast) [Tectona grandis]
Length = 2287
Score = 75.9 bits (185), Expect = 5e-12
Identities = 39/49 (79%), Positives = 42/49 (85%), Gaps = 6/49 (12%)
Frame = -3
Query: 278 NGLCSH------SDLVHGLLEVEGALVGSSRTEKDCSPFENDRVTLLLR 150
NG+ S+ SDLVHGLLEVEGALVGSSRTEKDCSPF+NDRVTLLLR
Sbjct: 1980 NGITSYGLVENDSDLVHGLLEVEGALVGSSRTEKDCSPFDNDRVTLLLR 2028
>gb|AFB74312.1| Ycf2 protein (chloroplast) [Portulaca oleracea]
Length = 2285
Score = 75.9 bits (185), Expect = 5e-12
Identities = 40/54 (74%), Positives = 43/54 (79%), Gaps = 6/54 (11%)
Frame = -3
Query: 278 NGLCSH------SDLVHGLLEVEGALVGSSRTEKDCSPFENDRVTLLLRTNLYN 135
NG+ S+ SDLVHGLLEVEGALVGSSRTEKDCS F+NDRVTLLLR L N
Sbjct: 1974 NGIASYGLVENDSDLVHGLLEVEGALVGSSRTEKDCSQFDNDRVTLLLRPELRN 2027
>gb|AFB74306.1| Ycf2 protein (chloroplast) [Anredera baselloides]
Length = 2280
Score = 75.9 bits (185), Expect = 5e-12
Identities = 40/54 (74%), Positives = 43/54 (79%), Gaps = 6/54 (11%)
Frame = -3
Query: 278 NGLCSH------SDLVHGLLEVEGALVGSSRTEKDCSPFENDRVTLLLRTNLYN 135
NG+ S+ SDLVHGLLEVEGALVGSSRTEKDCS F+NDRVTLLLR L N
Sbjct: 1969 NGIASYGLVENDSDLVHGLLEVEGALVGSSRTEKDCSQFDNDRVTLLLRPELRN 2022
>ref|YP_004935710.1| ycf2 gene product (chloroplast) [Sesamum indicum]
gi|359422324|ref|YP_004935729.1| ycf2 gene product
(chloroplast) [Sesamum indicum]
gi|347448339|gb|AEO92750.1| ycf2 (chloroplast) [Sesamum
indicum] gi|347448358|gb|AEO92769.1| ycf2 (chloroplast)
[Sesamum indicum] gi|496538644|gb|AGL45379.1| ribosomal
protein L23 (chloroplast) [Sesamum indicum]
gi|496538663|gb|AGL45398.1| Ycf2 (chloroplast) [Sesamum
indicum]
Length = 2097
Score = 75.9 bits (185), Expect = 5e-12
Identities = 39/49 (79%), Positives = 42/49 (85%), Gaps = 6/49 (12%)
Frame = -3
Query: 278 NGLCSH------SDLVHGLLEVEGALVGSSRTEKDCSPFENDRVTLLLR 150
NG+ S+ SDLVHGLLEVEGALVGSSRTEKDCSPF+NDRVTLLLR
Sbjct: 1788 NGITSYGLVENDSDLVHGLLEVEGALVGSSRTEKDCSPFDNDRVTLLLR 1836
>gb|AEK78264.1| hypothetical chloroplast RF2 [Portulaca oleracea]
Length = 2270
Score = 75.9 bits (185), Expect = 5e-12
Identities = 40/54 (74%), Positives = 43/54 (79%), Gaps = 6/54 (11%)
Frame = -3
Query: 278 NGLCSH------SDLVHGLLEVEGALVGSSRTEKDCSPFENDRVTLLLRTNLYN 135
NG+ S+ SDLVHGLLEVEGALVGSSRTEKDCS F+NDRVTLLLR L N
Sbjct: 1968 NGIASYGLVENDSDLVHGLLEVEGALVGSSRTEKDCSQFDNDRVTLLLRPELRN 2021
>gb|AEK78225.1| hypothetical chloroplast RF2 [Halophytum ameghinoi]
Length = 2253
Score = 75.9 bits (185), Expect = 5e-12
Identities = 40/54 (74%), Positives = 43/54 (79%), Gaps = 6/54 (11%)
Frame = -3
Query: 278 NGLCSH------SDLVHGLLEVEGALVGSSRTEKDCSPFENDRVTLLLRTNLYN 135
NG+ S+ SDLVHGLLEVEGALVGSSRTEKDCS F+NDRVTLLLR L N
Sbjct: 1951 NGIASYGLVENDSDLVHGLLEVEGALVGSSRTEKDCSQFDNDRVTLLLRPELRN 2004
>gb|AEK78208.1| hypothetical chloroplast RF2 [Claytonia virginica]
Length = 2269
Score = 75.9 bits (185), Expect = 5e-12
Identities = 40/54 (74%), Positives = 43/54 (79%), Gaps = 6/54 (11%)
Frame = -3
Query: 278 NGLCSH------SDLVHGLLEVEGALVGSSRTEKDCSPFENDRVTLLLRTNLYN 135
NG+ S+ SDLVHGLLEVEGALVGSSRTEKDCS F+NDRVTLLLR L N
Sbjct: 1967 NGIASYGLVENDSDLVHGLLEVEGALVGSSRTEKDCSQFDNDRVTLLLRPELRN 2020
>gb|AEK78195.1| hypothetical chloroplast RF2 [Basella alba]
Length = 2258
Score = 75.9 bits (185), Expect = 5e-12
Identities = 40/54 (74%), Positives = 43/54 (79%), Gaps = 6/54 (11%)
Frame = -3
Query: 278 NGLCSH------SDLVHGLLEVEGALVGSSRTEKDCSPFENDRVTLLLRTNLYN 135
NG+ S+ SDLVHGLLEVEGALVGSSRTEKDCS F+NDRVTLLLR L N
Sbjct: 1956 NGIASYGLVENDSDLVHGLLEVEGALVGSSRTEKDCSQFDNDRVTLLLRPELRN 2009
>gb|ADD30879.1| putative RF2 protein [Antirrhinum majus] gi|340807055|gb|AEK71663.1|
hypothetical chloroplast RF2 [Antirrhinum majus]
Length = 2274
Score = 75.9 bits (185), Expect = 5e-12
Identities = 39/49 (79%), Positives = 42/49 (85%), Gaps = 6/49 (12%)
Frame = -3
Query: 278 NGLCSH------SDLVHGLLEVEGALVGSSRTEKDCSPFENDRVTLLLR 150
NG+ S+ SDLVHGLLEVEGALVGSSRTEKDCSPF+NDRVTLLLR
Sbjct: 1970 NGITSYGLVENDSDLVHGLLEVEGALVGSSRTEKDCSPFDNDRVTLLLR 2018
>gb|AGW97929.1| hypothetical chloroplast RF21 (chloroplast) [Ipomoea polpha]
Length = 2199
Score = 75.5 bits (184), Expect = 7e-12
Identities = 41/65 (63%), Positives = 48/65 (73%), Gaps = 6/65 (9%)
Frame = -3
Query: 278 NGLCSH------SDLVHGLLEVEGALVGSSRTEKDCSPFENDRVTLLLRTNLYNHVFNRR 117
NG+ S+ SDLVHGLLEVEGALVGSSRTEK+CS F+NDRVTLLLR N + N
Sbjct: 1890 NGITSYGLVENDSDLVHGLLEVEGALVGSSRTEKNCSQFDNDRVTLLLRPEPRNMMQNGS 1949
Query: 116 CNPLE 102
C+ L+
Sbjct: 1950 CSILD 1954
>gb|AGW97908.1| hypothetical chloroplast RF21 (chloroplast) [Ipomoea polpha]
Length = 2189
Score = 75.5 bits (184), Expect = 7e-12
Identities = 41/65 (63%), Positives = 48/65 (73%), Gaps = 6/65 (9%)
Frame = -3
Query: 278 NGLCSH------SDLVHGLLEVEGALVGSSRTEKDCSPFENDRVTLLLRTNLYNHVFNRR 117
NG+ S+ SDLVHGLLEVEGALVGSSRTEK+CS F+NDRVTLLLR N + N
Sbjct: 1885 NGITSYGLVENDSDLVHGLLEVEGALVGSSRTEKNCSQFDNDRVTLLLRPEPRNMMQNGS 1944
Query: 116 CNPLE 102
C+ L+
Sbjct: 1945 CSILD 1949
>gb|AGW97504.1| hypothetical chloroplast RF21 (chloroplast) [Ipomoea murucoides]
Length = 2189
Score = 75.5 bits (184), Expect = 7e-12
Identities = 41/65 (63%), Positives = 48/65 (73%), Gaps = 6/65 (9%)
Frame = -3
Query: 278 NGLCSH------SDLVHGLLEVEGALVGSSRTEKDCSPFENDRVTLLLRTNLYNHVFNRR 117
NG+ S+ SDLVHGLLEVEGALVGSSRTEK+CS F+NDRVTLLLR N + N
Sbjct: 1885 NGITSYGLVENDSDLVHGLLEVEGALVGSSRTEKNCSQFDNDRVTLLLRPEPRNMMQNGS 1944
Query: 116 CNPLE 102
C+ L+
Sbjct: 1945 CSILD 1949
>gb|AGW97484.1| hypothetical chloroplast RF21 (chloroplast) [Ipomoea murucoides]
Length = 2175
Score = 75.5 bits (184), Expect = 7e-12
Identities = 41/65 (63%), Positives = 48/65 (73%), Gaps = 6/65 (9%)
Frame = -3
Query: 278 NGLCSH------SDLVHGLLEVEGALVGSSRTEKDCSPFENDRVTLLLRTNLYNHVFNRR 117
NG+ S+ SDLVHGLLEVEGALVGSSRTEK+CS F+NDRVTLLLR N + N
Sbjct: 1871 NGITSYGLVENDSDLVHGLLEVEGALVGSSRTEKNCSQFDNDRVTLLLRPEPRNMMQNGS 1930
Query: 116 CNPLE 102
C+ L+
Sbjct: 1931 CSILD 1935
>ref|YP_007890282.1| Ycf2 protein (chloroplast) [Cistanche deserticola]
gi|501595135|ref|YP_007890290.1| Ycf2 protein
(chloroplast) [Cistanche deserticola]
gi|429536995|gb|AFZ99566.1| Ycf2 protein (chloroplast)
[Cistanche deserticola] gi|429537003|gb|AFZ99574.1| Ycf2
protein (chloroplast) [Cistanche deserticola]
Length = 2257
Score = 75.5 bits (184), Expect = 7e-12
Identities = 37/45 (82%), Positives = 39/45 (86%)
Frame = -3
Query: 260 SDLVHGLLEVEGALVGSSRTEKDCSPFENDRVTLLLRTNLYNHVF 126
SDLVHGLLEVEGALVGSSRTEKDCSPFENDRVT LLR N ++
Sbjct: 1966 SDLVHGLLEVEGALVGSSRTEKDCSPFENDRVTFLLRPEPRNPLY 2010
>gb|AEK78271.1| hypothetical chloroplast RF2 [Rivina humilis]
Length = 2195
Score = 75.5 bits (184), Expect = 7e-12
Identities = 40/54 (74%), Positives = 43/54 (79%), Gaps = 6/54 (11%)
Frame = -3
Query: 278 NGLCSH------SDLVHGLLEVEGALVGSSRTEKDCSPFENDRVTLLLRTNLYN 135
NG+ S+ SDLVHGLLEVEGALVGSSRTEKDCS F+NDRVTLLLR L N
Sbjct: 1890 NGITSYGLVENDSDLVHGLLEVEGALVGSSRTEKDCSQFDNDRVTLLLRPELRN 1943
>gb|AEK78199.1| hypothetical chloroplast RF2 [Bougainvillea glabra]
Length = 2189
Score = 75.5 bits (184), Expect = 7e-12
Identities = 40/54 (74%), Positives = 43/54 (79%), Gaps = 6/54 (11%)
Frame = -3
Query: 278 NGLCSH------SDLVHGLLEVEGALVGSSRTEKDCSPFENDRVTLLLRTNLYN 135
NG+ S+ SDLVHGLLEVEGALVGSSRTEKDCS F+NDRVTLLLR L N
Sbjct: 1884 NGITSYGLIENDSDLVHGLLEVEGALVGSSRTEKDCSQFDNDRVTLLLRPELRN 1937
>gb|AEK78183.1| hypothetical chloroplast RF2 [Gisekia africana]
Length = 2275
Score = 75.5 bits (184), Expect = 7e-12
Identities = 40/54 (74%), Positives = 43/54 (79%), Gaps = 6/54 (11%)
Frame = -3
Query: 278 NGLCSH------SDLVHGLLEVEGALVGSSRTEKDCSPFENDRVTLLLRTNLYN 135
NG+ S+ SDLVHGLLEVEGALVGSSRTEKDCS F+NDRVTLLLR L N
Sbjct: 1970 NGITSYGLVENDSDLVHGLLEVEGALVGSSRTEKDCSQFDNDRVTLLLRPKLRN 2023