BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00014750
         (1523 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...   254   7e-65
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   234   6e-59
ref|XP_006485550.1| PREDICTED: uncharacterized protein LOC102627...   222   4e-55
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...   220   1e-54
gb|EPS61587.1| hypothetical protein M569_13207, partial [Genlise...   219   3e-54
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...   218   7e-54
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]             216   2e-53
gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]              216   2e-53
ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [S...   215   5e-53
gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza ...   210   1e-51
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   210   1e-51
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...   208   4e-51
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1...   207   7e-51
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...   207   7e-51
gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indi...   207   7e-51
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...   206   2e-50
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...   204   6e-50
gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japo...   204   6e-50
gb|EPS63383.1| hypothetical protein M569_11401 [Genlisea aurea]       203   2e-49
gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indi...   202   2e-49

>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score =  254 bits (649), Expect = 7e-65
 Identities = 143/459 (31%), Positives = 234/459 (50%), Gaps = 2/459 (0%)
 Frame = +1

Query: 7    WNCRGLGGPSTIPQIKEIVRSYHPSVFFICETKKKKTIISTVCRKLKCSDRWINVDSVGK 186
            WNC+G+G   T+  ++EI   Y P V F+CETKK++  +  V   L   D    V+ +GK
Sbjct: 6    WNCQGVGNTPTVRHLREIRGLYFPEVIFLCETKKRRNYLENVVGHLGFFDLH-TVEPIGK 64

Query: 187  SGGMLVFWEPHVNILKVVKNNFCFEIECEINDVHLWIVFVYINVDLRQRKDQWSYLKHAS 366
            SGG+ + W+  V I  +  +    +      D   ++  +Y      +R + W  L    
Sbjct: 65   SGGLALMWKDSVQIKVLQSDKRLIDALLIWQDKEFYLTCIYGEPVQAERGELWERLTRLG 124

Query: 367  RDWGDRWIIGGDWNDITNPDEKKGGRQRNSFSCQAFNDFIGSLSLCEVKFSGYPFTWFNN 546
                  W++ GD+N++ +P EK GG  R   SC  F   + S  L EV  SGY F+W+ N
Sbjct: 125  LSRSGPWMLTGDFNELVDPSEKIGGPARKESSCLEFRQMLNSCGLWEVNHSGYQFSWYGN 184

Query: 547  REGEGYIEERLDRFLVSPSWMLEFSNAQVLHLLRSSSDHVLIMLDPNPNKPKSKKRFCFD 726
            R  E  ++ RLDR + + +WM  F  A+  +L +  SDH  ++ +   +  +    F +D
Sbjct: 185  RNDE-LVQCRLDRTVANQAWMELFPQAKATYLQKICSDHSPLINNLVGDNWRKWAGFKYD 243

Query: 727  QRWLHMEGFDQIVERAWKYRIKGTPLFQIQAKIKQCRIDMLNWGKNAITNSTKQIGLISQ 906
            +RW+  EGF  ++   W  +   T    ++ KI  CR ++  W + +  +S  +I  +  
Sbjct: 244  KRWVQREGFKDLLCNFWSQQSTKTNALMME-KIASCRREISKWKRVSKPSSAVRIQELQF 302

Query: 907  KLESMNELGGIRDWKCWYDLKKDLHLAYEKEELYWRGKSRIQWLKQGDRNSKYFHASVVQ 1086
            KL++  +     D +    LKK+L   Y  EE +W+ KSRI W++ GDRN+KYFHA+   
Sbjct: 303  KLDAATKQIPF-DRRELARLKKELSQEYNNEEQFWQEKSRIMWMRNGDRNTKYFHAATKN 361

Query: 1087 RQKRNAIDKLIGRNGQTCDTPDLVEAEITSFYSELFSSSKPSFDSDILEGLPRSIEDSQA 1266
            R+ +N I KLI   G+   + + +     +++ +LF+S    +  + LE L   + D   
Sbjct: 362  RRAQNRIQKLIDEEGREWTSDEDLGRVAEAYFKKLFASEDVGYTVEELENLTPLVSDQMN 421

Query: 1267 RFLTRPVDKMEIRQALFELNPNKAPGPDG--SFLSRACW 1377
              L  P+ K E+++A F +NP+K PGPDG   FL +  W
Sbjct: 422  NNLLAPITKEEVQRATFSINPHKCPGPDGMNGFLYQQFW 460


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  234 bits (598), Expect = 6e-59
 Identities = 143/458 (31%), Positives = 234/458 (51%), Gaps = 9/458 (1%)
 Frame = +1

Query: 7    WNCRGLGGPSTIPQIKEIVRSYHPSVFFICETKKKKTIISTVCRKLKCSDRWINVDSVGK 186
            WNC+G+G P T+ Q++ ++ S  P   F+ ETK  K I+      L  S  +  V  VG+
Sbjct: 6    WNCQGMGNPWTVRQLRRLMASNTPDSLFMSETKVTKNIVEQKKESLGFSGAF-GVSCVGR 64

Query: 187  SGGMLVFWEPHVNILKVV---KNNFCFEIECEINDVHLWIVFVYINVDLRQRKDQWSYLK 357
            +GG+ +FW+      ++V   +N+ C ++     DV    V +Y   +   +   W+ +K
Sbjct: 65   AGGLCMFWKEETISFRMVSFSQNHICGDVGSN-GDVRWRFVGIYGWPEEENKHKTWALIK 123

Query: 358  HASRDWGDRWIIGGDWNDITNPDEKKGGRQRNSFSCQAFNDFIGSLSLCEVKFSGYPFTW 537
                ++    + GGD+N+I + DEK+GG  R   +   F + +   SL +++F G   TW
Sbjct: 124  GLCDEYEGPIVFGGDFNEILSYDEKEGGASRERRAIVGFRNVMDDCSLGDLRFVGQWHTW 183

Query: 538  FNNREGEGYIEERLDRFLVSPSWMLEFSNAQVLHLLRSSSDHVLIMLDPNPNKPKSKKR- 714
               R  E  I ERLDRF+VS SW+  F  A + H +R  SDH  I+L    N+   ++R 
Sbjct: 184  ERGRSPESRIRERLDRFIVSRSWLHLFPEAFIDHQVRYCSDHAAIVLRCLGNEGMPRRRA 243

Query: 715  --FCFDQRWLHMEGFDQIVERAWKYRIKGTPLFQIQAKIKQCRIDMLNWGKNAITNSTKQ 888
              F F+  WL  +  +++V  AW     G    +I  K+     ++  W K    +  K+
Sbjct: 244  GGFWFETFWLLDDTCEEVVRGAWNAAEGG----RICEKLGAVARELQGWSKKTFGSLRKK 299

Query: 889  IGLISQKLE-SMNELGGIRDWKCWYDLKKDLHLAYEKEELYWRGKSRIQWLKQGDRNSKY 1065
            I  + +KL  +  E   I  W+    L+++L   + K E YW  +SR+  +K GDRN+ Y
Sbjct: 300  IEAVEKKLHAAQGEATSIDSWERCVGLERELDELHAKNEAYWYLRSRVAEVKDGDRNTSY 359

Query: 1066 FHASVVQRQKRNAIDKLIGRNGQTCDTPDLVEAEITSFYSELFSSSKPSFD--SDILEGL 1239
            FH    QR+KRN I  +    G+     + +E  +  ++ E+F+SS+PS +   ++L+ +
Sbjct: 360  FHHKASQRKKRNLIHGIFDGGGRWQTEGEEIECVVERYFQEIFTSSEPSSNDFQEVLQHV 419

Query: 1240 PRSIEDSQARFLTRPVDKMEIRQALFELNPNKAPGPDG 1353
             RS+       L +P  K EI  AL +++P KAPGPDG
Sbjct: 420  KRSVTQEYNDILLKPYSKEEIFAALSDMHPCKAPGPDG 457


>ref|XP_006485550.1| PREDICTED: uncharacterized protein LOC102627687 [Citrus sinensis]
          Length = 473

 Score =  222 bits (565), Expect = 4e-55
 Identities = 132/464 (28%), Positives = 231/464 (49%), Gaps = 3/464 (0%)
 Frame = +1

Query: 7    WNCRGLGGPSTIPQIKEIVRSYHPSVFFICETKKKKTIISTVCRKLKCSDRWINVDSVGK 186
            W+CRGLG P T+  + ++ ++  P   F+ ET   +  ++ +  +L      + V+ VG+
Sbjct: 6    WSCRGLGHPRTVQVLADLAKNKKPDFIFLMETLSDRDRLNGIKIRLGYVGLCV-VEKVGR 64

Query: 187  SGGMLVFWEPHVNILKVVKNNFCFEIECEINDVHLWIVFVYINVDLRQR-KDQWSY-LKH 360
            SGG+ +FW+ + N+  +       ++  E      W    +       R ++ W+  L+ 
Sbjct: 65   SGGLALFWKTNYNVHLLKFGRNVIDVAMENTKRVKWRTTCFYGFPESSRCRESWNLKLRS 124

Query: 361  ASRDWGDRWIIGGDWNDITNPDEKKGGRQRNSFSCQAFNDFIGSLSLCEVKFSGYPFTWF 540
             +      W++ GD+ND+ N  EK+G     ++  Q F D +  L L ++   GY FTW 
Sbjct: 125  LALSSYFPWVVLGDFNDLLNSTEKRGKLVHPNWKLQGFKDVVSDLGLHDLGMEGYQFTWE 184

Query: 541  NNREGEGYIEERLDRFLVSPSWMLEFSNAQVLHLLRSSSDHVLIMLDPNPNKPKSK-KRF 717
             ++  + ++EERLD  L S +W+  F  A+V  L  S SDH+ I  DPNP   +S+ K+F
Sbjct: 185  MSKGNKNWLEERLDHGLASINWIRLFPQAKVSSLKASCSDHLHIFFDPNPLVYQSRVKKF 244

Query: 718  CFDQRWLHMEGFDQIVERAWKYRIKGTPLFQIQAKIKQCRIDMLNWGKNAITNSTKQIGL 897
             F+  WL       IV+ +W      +    IQ+KI  C  D+L WG     +  K+I  
Sbjct: 245  RFENLWLCEPDCQPIVQDSW----ASSGNVSIQSKINACGSDLLRWGSYLSRDFHKRIRD 300

Query: 898  ISQKLESMNELGGIRDWKCWYDLKKDLHLAYEKEELYWRGKSRIQWLKQGDRNSKYFHAS 1077
              Q++  +  L  +     + + +   +      E++W+ +S+  WLK+GD N +YFHA 
Sbjct: 301  CKQRIGVLRGLRDVVSLGDFTEARNRYNELLHSHEIFWKQRSKSLWLKEGDLNPRYFHAM 360

Query: 1078 VVQRQKRNAIDKLIGRNGQTCDTPDLVEAEITSFYSELFSSSKPSFDSDILEGLPRSIED 1257
               R+++N I KL    GQ C  P  +   I  +++++FSS   S D ++++ + + +  
Sbjct: 361  ASTRKRQNMIGKLRNSKGQWCTDPAEINELIGDYFTKIFSSEGGSCD-EVIQCVEKKLMA 419

Query: 1258 SQARFLTRPVDKMEIRQALFELNPNKAPGPDGSFLSRACWMSIL 1389
             Q   L  P    ++R A+F + P+K+P P+GS      WM +L
Sbjct: 420  GQNHSLMEPFTTADVRDAIFSMYPDKSPVPNGS--QERGWMWVL 461


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score =  220 bits (561), Expect = 1e-54
 Identities = 127/449 (28%), Positives = 230/449 (51%)
 Frame = +1

Query: 7    WNCRGLGGPSTIPQIKEIVRSYHPSVFFICETKKKKTIISTVCRKLKCSDRWINVDSVGK 186
            WNC+GLG P T+ +++E+ R Y   + F+ ETK++      +  K+   D  I +   G 
Sbjct: 368  WNCQGLGQPLTVRRLEEVQRVYFLDMLFLIETKQQDNYTRDLGVKMGFEDMCI-ISPRGL 426

Query: 187  SGGMLVFWEPHVNILKVVKNNFCFEIECEINDVHLWIVFVYINVDLRQRKDQWSYLKHAS 366
            SGG++V+W+ H++I  +  +    ++  E  + + ++  +Y +    +R   W  L+  S
Sbjct: 427  SGGLVVYWKKHLSIQVISHDVRLVDLYVEYKNFNFYLSCIYGHPIPSERHHLWEKLQRVS 486

Query: 367  RDWGDRWIIGGDWNDITNPDEKKGGRQRNSFSCQAFNDFIGSLSLCEVKFSGYPFTWFNN 546
                  W++ GD+N+I N +EKKGGR+R+  S Q F + I   ++ ++K  G P++W   
Sbjct: 487  AHRSGPWMMCGDFNEILNLNEKKGGRRRSIGSLQNFTNMINCCNMKDLKSKGNPYSWVGK 546

Query: 547  REGEGYIEERLDRFLVSPSWMLEFSNAQVLHLLRSSSDHVLIMLDPNPNKPKSKKRFCFD 726
            R+ E  IE  LDR  ++  W   F   +   L  + SDH  +++D        + +F +D
Sbjct: 547  RQNET-IESCLDRVFINSDWQASFPAFETEFLPIAGSDHAPVIIDIAEEVCTKRGQFRYD 605

Query: 727  QRWLHMEGFDQIVERAWKYRIKGTPLFQIQAKIKQCRIDMLNWGKNAITNSTKQIGLISQ 906
            +R    E F   V+R W  R +         K+  CR ++  W +   TN+ ++I  +  
Sbjct: 606  RRHFQFEDFVDSVQRGWN-RGRSDSHGGYYEKLHCCRQELAKWKRRTKTNTAEKIETLKY 664

Query: 907  KLESMNELGGIRDWKCWYDLKKDLHLAYEKEELYWRGKSRIQWLKQGDRNSKYFHASVVQ 1086
            ++++  E       +    L++DL+ AY  EELYW  KSR +W+  GDRN+ +F+AS   
Sbjct: 665  RVDAA-ERDHTLPHQTILRLRQDLNQAYRDEELYWHLKSRNRWMLLGDRNTMFFYASTKL 723

Query: 1087 RQKRNAIDKLIGRNGQTCDTPDLVEAEITSFYSELFSSSKPSFDSDILEGLPRSIEDSQA 1266
            R+ RN I  +    G      D +     +++++LF++++ S   +I+ G+   + +   
Sbjct: 724  RKSRNRIKAITDAQGIENFRDDTIGKVAENYFADLFTTTQTSDWEEIISGIAPKVTEQMN 783

Query: 1267 RFLTRPVDKMEIRQALFELNPNKAPGPDG 1353
              L + V   E+R A+F +  ++APG DG
Sbjct: 784  HELLQSVTDQEVRDAVFAIGADRAPGFDG 812


>gb|EPS61587.1| hypothetical protein M569_13207, partial [Genlisea aurea]
          Length = 475

 Score =  219 bits (557), Expect = 3e-54
 Identities = 136/473 (28%), Positives = 230/473 (48%), Gaps = 24/473 (5%)
 Frame = +1

Query: 7    WNCRGLGGPSTIPQIKEIVRSYHPSVFFICETKKKKTIISTVCRKLKCSDRWIN------ 168
            WNC+G+G P T+ ++KE++  + PS  F+CETK         C   K S  W+       
Sbjct: 1    WNCQGMGSPWTVRRLKELIVQFSPSFIFLCETK---------CSSCKLS--WVKNHYPYF 49

Query: 169  ---VDSVGKSGGMLVFWEPHVNILKVVKNNFCFEIECEIN--DVHLWIVFVYINVDLRQR 333
               VD+VG SGG+ +FW+  +++  +  + +  ++   I+  DV   +   Y N     R
Sbjct: 50   GFFVDAVGASGGLALFWKKELDVSLLSYSKWYIDVSINISFGDVQCRVTGFYDNPISSSR 109

Query: 334  KDQWSYLKHASRDWGDRWIIGGDWNDITNPDEKKGGRQRNSFSCQAFNDFIGSLSLCEVK 513
             D W+ L+   R     WI  GD+N++  P E      R +     F   +    L ++ 
Sbjct: 110  PDSWNLLRRLHRHSLRPWICVGDFNEVLFPHEVSSLASRPTAQMVGFRRALMDCGLTDLP 169

Query: 514  FSGYPFTWFNNREGEGYIEERLDRFLVSPSWMLEFSNAQVLHLLRSSSDHVLIMLDPNPN 693
            + G+PFTW N R+    +  RLDR + S SW+  +      HL    SDH  + +   P 
Sbjct: 170  YHGHPFTWSNKRKHPQTVRARLDRAVASTSWLQCYPCTSTSHLSFGGSDHAPLWIQSAPP 229

Query: 694  KP----KSKKRFCFDQRWLHMEGFDQIVERAWKYRIKGTPLFQIQAKIKQCRIDMLNWGK 861
                  +  +RF F+ RW+ + G D  +  AW    +G P   +Q K+   RI +L W +
Sbjct: 230  SAGDGLRKSRRFRFEARWMQLPGCDSTIRTAWT-SSQGPP-STLQPKLGTTRISLLKWYQ 287

Query: 862  NAITNSTKQIGLISQKLESM-----NELGGIRDWKCWYDLKKDLHLAYEKEELYWRGKSR 1026
            + I+     I  +  +L ++     +++   R+      L+ +L    ++EEL+W+ +S+
Sbjct: 288  HQISPIKANIKRVETELATIAVSTRDDIFMARE----KQLQCELAGYLQQEELFWKQRSK 343

Query: 1027 IQWLKQGDRNSKYFHASVVQRQKRNAIDKLIGRNGQTCDTPDLVEAEITSFYSELFSSSK 1206
              WL +GDRN+ YFHA    R++ N I  ++  +G+  D+P  + + I  +++ +FSS+ 
Sbjct: 344  THWLAKGDRNTAYFHACASGRRECNRISSIMDSDGRQQDSPHGIHSAILDYFNRIFSSTM 403

Query: 1207 PSFDSDILEGLPRSIE----DSQARFLTRPVDKMEIRQALFELNPNKAPGPDG 1353
            P    ++L    RSI     DS    L+ P  K E+  A+ ++ P  APGPDG
Sbjct: 404  P--PPELLAATTRSISNRLTDSMKTMLSVPFTKEEVWPAIKQMKPLSAPGPDG 454


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score =  218 bits (554), Expect = 7e-54
 Identities = 121/445 (27%), Positives = 227/445 (51%), Gaps = 2/445 (0%)
 Frame = +1

Query: 25   GGPSTIPQIKEIVRSYHPSVFFICETKKKKTIISTVCRKLKCSDRWINVDSVGKSGGMLV 204
            GG  T+   + I + ++P + F+ ET++++ II    R LK +D  + VD +    G+ +
Sbjct: 619  GGGKTL---RRICKKHNPEILFLMETRQQEGIIKEWKRNLKFTDHHV-VDPIATGRGLAL 674

Query: 205  FWEPHVNILKVVKN-NFCFEIECEINDVHLW-IVFVYINVDLRQRKDQWSYLKHASRDWG 378
            FW   V +  +  + N+   +   ++D  +  I ++Y N    +++  W  +        
Sbjct: 675  FWGDAVQVSILDSSPNYVDTVVSFLSDAFVCKITWMYGNPHDNEKRAFWRLMYSRFPVQS 734

Query: 379  DRWIIGGDWNDITNPDEKKGGRQRNSFSCQAFNDFIGSLSLCEVKFSGYPFTWFNNREGE 558
              W++ GD+N++ +P EK GG     +  + F DF+ +  L ++ F G  F+WF  R G 
Sbjct: 735  LPWLVLGDFNEVLDPSEKWGGGPPLPWRIKLFRDFLNNGHLRDLHFKGPGFSWFAMRHGR 794

Query: 559  GYIEERLDRFLVSPSWMLEFSNAQVLHLLRSSSDHVLIMLDPNPNKPKSKKRFCFDQRWL 738
             +I+ERLDR L + +W     N Q+LHL +  SDH  ++LD NP      + F F+Q W 
Sbjct: 795  VFIKERLDRALGNIAWSSSQPNTQILHLPKIGSDHRPLLLDSNPKMLNKTRLFRFEQMWT 854

Query: 739  HMEGFDQIVERAWKYRIKGTPLFQIQAKIKQCRIDMLNWGKNAITNSTKQIGLISQKLES 918
              E +  +++R+W     G+ +      +  C   +  W K   +N + Q+  +   +E 
Sbjct: 855  THEEYSDVIQRSWPPAFGGSAMRSWNRNLLSCGKALKMWSKEKFSNPSVQVADLLSDIEK 914

Query: 919  MNELGGIRDWKCWYDLKKDLHLAYEKEELYWRGKSRIQWLKQGDRNSKYFHASVVQRQKR 1098
            +++            L   +   + ++E+YW  +SR+ WLK GD+NS +FH + +QR++ 
Sbjct: 915  LHQSNPPDAHHQINILTDQVTKLWTQDEMYWHQRSRVNWLKLGDQNSSFFHQTTIQRRQY 974

Query: 1099 NAIDKLIGRNGQTCDTPDLVEAEITSFYSELFSSSKPSFDSDILEGLPRSIEDSQARFLT 1278
            N I +L   +G   D+   V  +   +++ L+ S+ P    ++L+ +  ++     + L+
Sbjct: 975  NKIVRLKDDHGNWLDSEADVALQFLDYFTALYQSNGPQQWEEVLDFVDTAVTAEMNKILS 1034

Query: 1279 RPVDKMEIRQALFELNPNKAPGPDG 1353
             PV  +E+++A+F+L   KAPGPDG
Sbjct: 1035 SPVSLLEVKKAVFDLGATKAPGPDG 1059


>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
          Length = 1270

 Score =  216 bits (550), Expect = 2e-53
 Identities = 133/405 (32%), Positives = 204/405 (50%), Gaps = 5/405 (1%)
 Frame = +1

Query: 154  DRWINVDSVGKSGGMLVFWEPHVNI-LKVVKNNFCFEIECEINDVHLWIVFVYINVDLRQ 330
            D+   V+ VGK GG+ + W+  V + LK V  N   + + +   V+  +  VY + D  +
Sbjct: 17   DQVYTVEPVGKCGGLALLWKSSVQVDLKFVDKNL-MDAQVQFGAVNFCVSCVYGDPDRSK 75

Query: 331  RKDQWSYLKHASRDWGDRWIIGGDWNDITNPDEKKGGRQRNSFSCQAFNDFIGSLSLCEV 510
            R   W  +        D+W + GD+NDI +  EK GG +R+   C+AFN+ I    L E+
Sbjct: 76   RSQAWERISRIGVGRRDKWCMFGDFNDILHNGEKNGGPRRSDLDCKAFNEMIKGCDLVEM 135

Query: 511  KFSGYPFTWFNNREGEGYIEERLDRFLVSPSWMLEFSNAQVLHLLRSSSDHVLIMLDPNP 690
               G  FTW   R G+ +I+ RLDR   +  W   F  +    L    SDH  +++    
Sbjct: 136  PAHGNGFTW-AGRRGDHWIQCRLDRAFGNKEWFCFFPVSNQTFLDFRGSDHRPVLIKLMS 194

Query: 691  NKPKSKKRFCFDQRWLHMEGFDQIVERAWKYRIKGTPLFQIQAKIKQCRIDMLNWGKNAI 870
            ++   + +F FD+R+L  E   + + R W     GT +  +  +++ CR  + +W K   
Sbjct: 195  SQDSYRGQFRFDKRFLFKEDVKEAIIRTWSRGKHGTNI-SVADRLRACRKSLSSWKKQNN 253

Query: 871  TNSTKQIGLISQKLESMNELGGIRDWKCWYD---LKKDLHLAYEKEELYWRGKSRIQWLK 1041
             NS  +I  +   LE    L     W  +     LKKDL  AY +EE YW+ KSR +WL+
Sbjct: 254  LNSLDKINQLEAALEKEQSL----VWPIFQRVSVLKKDLAKAYREEEAYWKQKSRQKWLR 309

Query: 1042 QGDRNSKYFHASVVQRQKRNAIDKLIGRNGQTCDTPDLVEAEI-TSFYSELFSSSKPSFD 1218
             G+RNSKYFHA+V Q ++R  I+KL   NG    T +  + E+  +++  LF SS PS  
Sbjct: 310  SGNRNSKYFHAAVKQNRQRKRIEKLKDVNG-NMQTSEAAKGEVAAAYFGNLFKSSNPSGF 368

Query: 1219 SDILEGLPRSIEDSQARFLTRPVDKMEIRQALFELNPNKAPGPDG 1353
            +D   GL   + +     L   V   EI++A+F + P  APGPDG
Sbjct: 369  TDWFSGLVPRVSEVMNESLVGEVSAQEIKEAVFSIKPASAPGPDG 413


>gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]
          Length = 1254

 Score =  216 bits (550), Expect = 2e-53
 Identities = 133/405 (32%), Positives = 204/405 (50%), Gaps = 5/405 (1%)
 Frame = +1

Query: 154  DRWINVDSVGKSGGMLVFWEPHVNI-LKVVKNNFCFEIECEINDVHLWIVFVYINVDLRQ 330
            D+   V+ VGK GG+ + W+  V + LK V  N   + + +   V+  +  VY + D  +
Sbjct: 20   DQVYTVEPVGKCGGLALLWKSSVQVDLKFVDKNL-MDAQVQFGAVNFCVSCVYGDPDRSK 78

Query: 331  RKDQWSYLKHASRDWGDRWIIGGDWNDITNPDEKKGGRQRNSFSCQAFNDFIGSLSLCEV 510
            R   W  +        D+W + GD+NDI +  EK GG +R+   C+AFN+ I    L E+
Sbjct: 79   RSQAWERISRIGVGRRDKWCMFGDFNDILHNGEKNGGPRRSDLDCKAFNEMIKGCDLVEM 138

Query: 511  KFSGYPFTWFNNREGEGYIEERLDRFLVSPSWMLEFSNAQVLHLLRSSSDHVLIMLDPNP 690
               G  FTW   R G+ +I+ RLDR   +  W   F  +    L    SDH  +++    
Sbjct: 139  PAHGNGFTW-AGRRGDHWIQCRLDRAFGNKEWFCFFPVSNQTFLDFRGSDHRPVLIKLMS 197

Query: 691  NKPKSKKRFCFDQRWLHMEGFDQIVERAWKYRIKGTPLFQIQAKIKQCRIDMLNWGKNAI 870
            ++   + +F FD+R+L  E   + + R W     GT +  +  +++ CR  + +W K   
Sbjct: 198  SQDSYRGQFRFDKRFLFKEDVKEAIIRTWSRGKHGTNI-SVADRLRACRKSLSSWKKQNN 256

Query: 871  TNSTKQIGLISQKLESMNELGGIRDWKCWYD---LKKDLHLAYEKEELYWRGKSRIQWLK 1041
             NS  +I  +   LE    L     W  +     LKKDL  AY +EE YW+ KSR +WL+
Sbjct: 257  LNSLDKINQLEAALEKEQSL----VWPIFQRVSVLKKDLAKAYREEEAYWKQKSRQKWLR 312

Query: 1042 QGDRNSKYFHASVVQRQKRNAIDKLIGRNGQTCDTPDLVEAEI-TSFYSELFSSSKPSFD 1218
             G+RNSKYFHA+V Q ++R  I+KL   NG    T +  + E+  +++  LF SS PS  
Sbjct: 313  SGNRNSKYFHAAVKQNRQRKRIEKLKDVNG-NMQTSEAAKGEVAAAYFGNLFKSSNPSGF 371

Query: 1219 SDILEGLPRSIEDSQARFLTRPVDKMEIRQALFELNPNKAPGPDG 1353
            +D   GL   + +     L   V   EI++A+F + P  APGPDG
Sbjct: 372  TDWFSGLVPRVSEVMNESLVGEVSAQEIKEAVFSIKPASAPGPDG 416


>ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [Sorghum bicolor]
            gi|241936261|gb|EES09406.1| hypothetical protein
            SORBIDRAFT_05g005061 [Sorghum bicolor]
          Length = 753

 Score =  215 bits (547), Expect = 5e-53
 Identities = 133/457 (29%), Positives = 221/457 (48%), Gaps = 8/457 (1%)
 Frame = +1

Query: 7    WNCRGLGGPSTIPQIKEIVRSYHPSVFFICETKKKKTIISTVCRKLKCSDRWINVDSVGK 186
            WNCRG+G P+T+ +++++ + Y PSV FI ET+  K  +  + R     D    V+S G+
Sbjct: 6    WNCRGIGNPATVKELRDLAKDYAPSVMFIMETQISKYRVENL-RYTLSFDNSFAVNSSGR 64

Query: 187  SGGMLVFWEPHVNILKVVKNNFCFE-IECEINDVHLWIVFVYINVDLRQRKDQWSYLKHA 363
            SGG+ +FW   V +     +N+  + I  E       + F+Y   +   R   W  +K  
Sbjct: 65   SGGLGLFWNNDVLLSIQKYSNYHIDTIISEHGKEPRRMSFIYGEPNRSFRYRTWDIMKQM 124

Query: 364  SRDWGDRWIIGGDWNDITNPDEKKGGRQRNSFSCQAFNDFIGSLSLCEVKFSGYPFTWFN 543
              D    W+  GD+N+I   +E+ G  +R  +  +   D +    L ++ + G  +T+  
Sbjct: 125  RSDTDLPWVCMGDFNEILRREEQLGPNEREEYLMEGVRDAVDMCQLRDIGYIGLDWTFEK 184

Query: 544  NREGEGYIEERLDRFLVSPSWMLEFSNAQVLHLLRSSSDHVLIMLDPNPNKPKSK----- 708
               G  ++  RLDR L S +W   F  A V HL    SDH  I+L   P++         
Sbjct: 185  KVAGGHFVRVRLDRALASVNWCARFPLAAVQHLTAVKSDHCPILLSHVPDERNEGGGCQG 244

Query: 709  KRFCFDQRWLHMEGFDQIVERAWKYRIKGTPLFQIQAKIKQCRIDMLNWGKNAITNSTKQ 888
            K F ++  W   E    ++E+ WK       +  ++ K+     ++ +WG        K+
Sbjct: 245  KPFRYELMWETNERLSSLIEQIWKNGQHCNSVKDMKDKLFHLGEELKSWGGKTFGVVRKE 304

Query: 889  IGLISQKLESMNELGGIRDWKCWYDLK--KDLHLAYEKEELYWRGKSRIQWLKQGDRNSK 1062
            + +  ++LE +      R+     + K    + L   +EE+ WR +SRI WL +GD N+K
Sbjct: 305  LRVQKKRLEQLRA-DPSRNTVSEEEQKIVNRIILLNYQEEIMWRQRSRITWLHEGDSNTK 363

Query: 1063 YFHASVVQRQKRNAIDKLIGRNGQTCDTPDLVEAEITSFYSELFSSSKPSFDSDILEGLP 1242
            +FH    +R+ RN IDKL   +G  C   D +   +  FY  LF S   S  + +L+ +P
Sbjct: 364  FFHQRASRRRIRNRIDKLNRPDGSECTNVDELHQMVVDFYRNLFESEGTSNMNLVLDHIP 423

Query: 1243 RSIEDSQARFLTRPVDKMEIRQALFELNPNKAPGPDG 1353
            R + D    FL  P ++ E++ ALF++ P K+PGPDG
Sbjct: 424  RKVTDDMNLFLCAPFNETEVKNALFQMFPTKSPGPDG 460


>gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1833

 Score =  210 bits (535), Expect = 1e-51
 Identities = 123/431 (28%), Positives = 211/431 (48%), Gaps = 3/431 (0%)
 Frame = +1

Query: 70   YHPSVFFICETKKKKTIISTVCRKLKCSDRWINVDSVGKSGGMLVFWEPHVNILKVVKNN 249
            + P + F+ ET++ + ++       +C      V+ VGK GG+ +FW+  +N++    N+
Sbjct: 10   HRPKIVFLAETRQDQYMVQNRIGLRRC----FTVNGVGKGGGLALFWDESMNVVLKSYNS 65

Query: 250  FCFEIECEINDVHLW-IVFVYINVDLRQRKDQWSYLKHASRDWGDRWIIGGDWNDITNPD 426
               ++     D   W   FVY     + R   WS L+    + GD W++ GD+N+     
Sbjct: 66   RHIDVLITELDCCTWRATFVYGEPRAQDRHLMWSLLRRIRSNSGDPWLMIGDFNEAMWQT 125

Query: 427  EKKGGRQRNSFSCQAFNDFIGSLSLCEVKFSGYPFTWFN-NREGEGYIEERLDRFLVSPS 603
            E K  R+R+    + F + +    L ++ F G P+T+ N  REG   ++ RLDR + SP+
Sbjct: 126  EHKSHRKRSESQMRDFREVLSECDLHDIGFQGAPWTFCNMQREGRN-VKVRLDRGVASPA 184

Query: 604  WMLEFSNAQVLHLLRSSSDHVLIMLDPNPNK-PKSKKRFCFDQRWLHMEGFDQIVERAWK 780
            W   F  A + HL   SSDH  ++L+       +  K   +++ W       ++++ AW 
Sbjct: 185  WSSRFPQAVITHLTTPSSDHAPLLLEREETTLARPMKIMRYEEVWERESSLPEVIQEAWT 244

Query: 781  YRIKGTPLFQIQAKIKQCRIDMLNWGKNAITNSTKQIGLISQKLESMNELGGIRDWKCWY 960
                 + L  I  K+K     +++W K+ I N  K+I  + +KL  +  +G +      +
Sbjct: 245  MGADASTLGDINDKMKVTMTKLVSWSKDKIGNVRKKIKDLREKLGELRNIGLLDTDNEVH 304

Query: 961  DLKKDLHLAYEKEELYWRGKSRIQWLKQGDRNSKYFHASVVQRQKRNAIDKLIGRNGQTC 1140
             +KK+L     +EE++W+ +SRI WLK+GD N++YFH     R K+N I KL   +G T 
Sbjct: 305  SVKKELEEMLHREEIWWKQRSRITWLKEGDLNTRYFHLKASWRAKKNKIKKLKKNDGSTT 364

Query: 1141 DTPDLVEAEITSFYSELFSSSKPSFDSDILEGLPRSIEDSQARFLTRPVDKMEIRQALFE 1320
                 ++    SF+ +L++        ++L      I +     L +P    EI  ALF+
Sbjct: 365  MNKKEMKEINRSFFQQLYTKDDNLNPVNLLNMFHEKISEQMNADLIKPFTNEEISDALFQ 424

Query: 1321 LNPNKAPGPDG 1353
            + P KAPGPDG
Sbjct: 425  IGPLKAPGPDG 435


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  210 bits (534), Expect = 1e-51
 Identities = 136/463 (29%), Positives = 218/463 (47%), Gaps = 14/463 (3%)
 Frame = +1

Query: 7    WNCRGLGGPSTIPQIKEIVRSYHPSVFFICETKKKKTIISTVCRKLKCSDRWINVDSVG- 183
            WNCRG+G PS +  ++ ++ S +P + F+ ETK K   + +V +KLK  +  + VD  G 
Sbjct: 7    WNCRGMGSPSALSALRRLLASENPQIVFLSETKLKSYEMESVKKKLKW-EHMVAVDCEGE 65

Query: 184  ---KSGGMLVFWEPHVNILKVVKNNFCFEIECEINDVHLWIVFVYINVDLRQRKDQWSYL 354
               + GG+ + W   + +  +  ++   +I         W           + KD+   L
Sbjct: 66   CRKRRGGLAMLWRSEIKVQVMSMSSNHIDIVVGEEAQGEWRFTGIYGYPEEEHKDKTGAL 125

Query: 355  KHASRDWGDR-WIIGGDWNDITNPDEKKGGRQRNSFSCQAFNDFIGSLSLCEVKFSGYPF 531
              A      R W+ GGD+N +    EKKGG   NS     F + +      ++ F GY F
Sbjct: 126  LSALARASRRPWLCGGDFNLMLVASEKKGGDGFNSREADIFRNAMEECHFMDLGFVGYEF 185

Query: 532  TWFNNREGEGYIEERLDRFLVSPSWMLEFSNAQVLHLLRSSSDHVLIMLDPN-----PNK 696
            TW NNR G+  I+ERLDRF+ +  W ++F  + V HL +  SDHV I+           +
Sbjct: 186  TWTNNRGGDANIQERLDRFVANDLWKIKFPGSFVSHLPKRKSDHVPIVASVKGAQSAATR 245

Query: 697  PKSKKRFCFDQRWLHMEGFDQIVERAWKYRIKGTPLFQIQAKIKQCRI--DMLNWGKNAI 870
             K  KRF F+  WL     D++V+  W   ++GT      A I   R    +L+W K   
Sbjct: 246  TKKSKRFRFEAMWLREGESDEVVKETW---MRGT-----DAGINLARTANKLLSWSKQKF 297

Query: 871  TNSTKQIGLISQKLESMNELGGIRDWKCWYDLKKDLHL--AYEKEELYWRGKSRIQWLKQ 1044
             +  K+I +   +++ + E     D    +    D  +    ++EE+YW  +SR  W+K 
Sbjct: 298  GHVAKEIRMCQHQMKVLMESEPSED-NIMHMRALDARMDELEKREEVYWHQRSRQDWIKS 356

Query: 1045 GDRNSKYFHASVVQRQKRNAIDKLIGRNGQTCDTPDLVEAEITSFYSELFSSSKPSFDSD 1224
            GD+N+K+FH     R++RN + ++    G+  +  D V      ++  LF S        
Sbjct: 357  GDKNTKFFHQKASHREQRNNVRRIRNEAGEWFEDEDDVTECFAHYFENLFQSGNNCEMDP 416

Query: 1225 ILEGLPRSIEDSQARFLTRPVDKMEIRQALFELNPNKAPGPDG 1353
            IL  +   I D     L  P  + E+  AL +++PNKAPGPDG
Sbjct: 417  ILNIVKPQITDELGTQLDAPFRREEVSAALAQMHPNKAPGPDG 459


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  208 bits (530), Expect = 4e-51
 Identities = 133/457 (29%), Positives = 228/457 (49%), Gaps = 8/457 (1%)
 Frame = +1

Query: 7    WNCRGLGGPSTIPQIKEIVRSYHPSVFFICETKKKKTIISTVCRKLKCSDRWINVDSVGK 186
            WNCRG+G P T+ Q+++    Y P + F+ ET   KT    +  +L  ++ +  V S G+
Sbjct: 6    WNCRGVGNPRTVRQLRKWSTFYAPDIMFLSETMINKTESEALKSRLGFANAF-GVSSRGR 64

Query: 187  SGGMLVFWEPHVN--ILKVVKNNFCFEIECEINDVHLW-IVFVYINVDLRQRKDQWSYLK 357
            +GG+ VFW   ++  ++   +++ C +I+   +    W  V +Y      ++   WS ++
Sbjct: 65   AGGLCVFWREELSFSLVSFSQHHICGDID---DGAKKWRFVGIYGWAKEEEKHHTWSLMR 121

Query: 358  HASRDWGDRWIIGGDWNDITNPDEKKGGRQRNSFSCQAFNDFIGSLSLCEVKFSGYPFTW 537
                D     ++GGD+N+I + +EK+GG  R       F + +  L L ++ ++G   TW
Sbjct: 122  FLCEDLSRPILMGGDFNEIMSYEEKEGGADRVRRGMYQFRETMDDLFLRDLGYNGVWHTW 181

Query: 538  FNNREGEGYIEERLDRFLVSPSWMLEFSNAQVLHLLRSSSDHVLIMLDPN-PNKPKSK-K 711
                     I ERLDRF+ SPSW   + N  V H +R  SDH+ I L  N   +P SK +
Sbjct: 182  ERGNSLSTCIRERLDRFVCSPSWATMYPNTIVDHSMRYKSDHLAICLRSNRTRRPTSKQR 241

Query: 712  RFCFDQRWLHMEGFDQIVERAWKYRIKGTPLFQIQAKIKQCRIDMLNWGKNAITNSTKQI 891
            RF F+  WL     ++ +  AW      +    +  ++    + + +W      N  KQ+
Sbjct: 242  RFFFETSWLLDPTCEETIRDAWTDSAGDS----LTGRLDLLALKLKSWSSEKGGNIGKQL 297

Query: 892  GLISQKLESMNELG-GIRDWKCWYDLKKDLHLAYEKEELYWRGKSRIQWLKQGDRNSKYF 1068
            G +   L  + +      + +    L+K L   + K+E  W  +SR   ++ GDRN+KYF
Sbjct: 298  GRVESDLCRLQQQPISSANCEARLTLEKKLDELHAKQEARWYLRSRAMEVRDGDRNTKYF 357

Query: 1069 HASVVQRQKRNAIDKLIGRNGQTCDTPDLVEAEITSFYSELFSSSKPSFD--SDILEGLP 1242
            H    QR+KRN +  L   +G  C+  D +E   T +++ +F+S+ PS    +D+L  + 
Sbjct: 358  HHKASQRKKRNFVKGLFDASGTWCEEVDDIECVFTDYFTSIFTSTNPSDVQLNDVLCCVD 417

Query: 1243 RSIEDSQARFLTRPVDKMEIRQALFELNPNKAPGPDG 1353
              + +    +L +P  K E+  AL +++P KAPGPDG
Sbjct: 418  PVVTEECNTWLLKPFSKEELYVALSQMHPCKAPGPDG 454


>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) - Arabidopsis
            thaliana retrotransposon Ta11-1 gi|976278|gb|AAA75254.1|
            reverse transcriptase [Arabidopsis thaliana]
          Length = 1333

 Score =  207 bits (528), Expect = 7e-51
 Identities = 135/464 (29%), Positives = 219/464 (47%), Gaps = 4/464 (0%)
 Frame = +1

Query: 7    WNCRGLGGPS--TIPQIKEIVRSYHPSVFFICETKKKKTIISTVCRKLKCSDRWINVDSV 180
            WNC+GLG     TIP++ E+  S+ P V F+ ETK    ++  +   L   +R   V+ +
Sbjct: 6    WNCQGLGWSQDLTIPRLMEMRLSHFPEVLFLMETKNCSNVVVDLQEWLGY-ERVFTVNPI 64

Query: 181  GKSGGMLVFWEPHVNILKVVKNNFCFEIECEINDVHLWIVFVYINVDLRQRKDQWSYLKH 360
            G SGG+ +FW+  V+I+    +    + + +      ++  VY N     +   W  +  
Sbjct: 65   GLSGGLALFWKKGVDIVIKYADKNLIDFQIQFGSHEFYVSCVYGNPAFSDKHLVWEKITR 124

Query: 361  ASRDWGDRWIIGGDWNDITNPDEKKGGRQRNSFSCQAFNDFIGSLSLCEVKFSGYPFTWF 540
               +  + W + GD+N I +  EK+GG +R   S   F D + S  + E+   G PFTW 
Sbjct: 125  IGINRKEPWCMLGDFNPILHNGEKRGGPRRGDSSFLPFTDMLDSCDMLELPSIGNPFTW- 183

Query: 541  NNREGEGYIEERLDRFLVSPSWMLEFSNAQVLHLLRSSSDHVLIMLDPNPNKPKSKKRFC 720
              +  E +I+ RLDR   + +W   F  +    L +  SDH  +++     K + +  F 
Sbjct: 184  GGKTNEMWIQSRLDRCFGNKNWFRFFPISNQEFLDKRGSDHRPVLVRLTKTKEEYRGNFR 243

Query: 721  FDQRWLHMEGFDQIVERAWKYRIKGTPLFQIQAKIKQCRIDMLNWGKNAITNSTKQIGLI 900
            FD+R  +     + + +AW    +   L  +  K+K CR  +  W K    NS+ +I   
Sbjct: 244  FDKRLFNQPNVKETIVQAWNGSQRNENLLVLD-KLKHCRSALSRWKKENNINSSTRITQA 302

Query: 901  SQKLESMNELGGIRDWKCWYDLKKDLHLAYEKEELYWRGKSRIQWLKQGDRNSKYFHASV 1080
               LE + +  G       + LK DL  A   EE++W  KSR +W+  GD+N+ +FHASV
Sbjct: 303  RAALE-LEQSSGFPRADLVFSLKNDLCKANHDEEVFWSQKSRAKWMHSGDKNTSFFHASV 361

Query: 1081 VQRQKRNAIDKLIGRNGQTCDTPDLVEAEITSFYSELFSSSKPSFDSDILEGLPRSIEDS 1260
               + +  ID+L   NG          A   +++S+LF S+ PS   D+ E     + +S
Sbjct: 362  KDNRGKQHIDQLCDVNGLFHKDEMNKGAIAEAYFSDLFKSTDPSSFVDLFEDYQPRVTES 421

Query: 1261 QARFLTRPVDKMEIRQALFELNPNKAPGPDG--SFLSRACWMSI 1386
                L   V K EIR+A+F +  + APG DG   F  +  W  I
Sbjct: 422  MNNTLIAAVSKNEIREAVFAIRSSSAPGVDGFTGFFFQKYWSII 465


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  207 bits (528), Expect = 7e-51
 Identities = 141/458 (30%), Positives = 233/458 (50%), Gaps = 9/458 (1%)
 Frame = +1

Query: 7    WNCRGLGGPSTIPQIKEIVRSYHPSVFFICETKKKKTIISTVCRKLKCSDRWINVDSVGK 186
            WNCRGLG P ++ Q++     + P + F+ ET   K  +  +   L  S+ +  V SVG+
Sbjct: 6    WNCRGLGNPWSVRQLRSWSNQFAPDIIFVSETMINKIEVEALKSWLGFSNAF-GVASVGR 64

Query: 187  SGGMLVFWEPHV--NILKVVKNNFCFEIECEINDVHLW-IVFVYINVDLRQRKDQWSYLK 357
            +GG+ ++W+  V  +++   +++ C ++E   +    W  V VY      ++   WS L+
Sbjct: 65   AGGLCLYWKEEVMFSLVSFSQHHICGDVE---DGNKKWRFVGVYGWAKEEEKHLTWSLLR 121

Query: 358  HASRDWGDRWIIGGDWNDITNPDEKKGGRQRNSFSCQAFNDFIGSLSLCEVKFSGYPFTW 537
            H   D     ++GGD+N+I +  EK+GG  R       F D + +L+L ++ + G  +TW
Sbjct: 122  HLCEDTSLPILLGGDFNEILSAAEKEGGANRVRREMINFRDTLDTLALRDLGYVGTWYTW 181

Query: 538  FNNREGEGYIEERLDRFLVSPSWMLEFSNAQVLHLLRSSSDHVLIML-DPNPNKPKSK-K 711
               R     I ERLDR+L S SW+  + ++   H +R  SDH  I+L      +P+ K +
Sbjct: 182  ERGRSPSTCIRERLDRYLCSNSWLDLYPDSVPEHTIRYKSDHSAIVLRSQRAGRPRGKTR 241

Query: 712  RFCFDQRWLHMEGFDQIVERAWKYRIKGTPLFQIQAKIKQCRIDMLNWGKNAITNSTKQI 891
            R  F+  WL  +  + +V  +W+   +G  +    A + QC   ++ W      N +KQI
Sbjct: 242  RLHFETSWLLDDECEAVVRESWE-NSEGEVMTGRVASMGQC---LVRWSTKKFKNLSKQI 297

Query: 892  GLISQKLESMNELGGIRDWKC--WYDLKKDLHLAYEKEELYWRGKSRIQWLKQGDRNSKY 1065
               ++K  S+ +   I +  C     L+K L   + K E YW  +SR+  +K GD+N+KY
Sbjct: 298  E-TAEKALSVAQNNPISESACQECVLLEKKLDELHAKHEAYWYLRSRVAEVKDGDKNTKY 356

Query: 1066 FHASVVQRQKRNAIDKLIGRNGQTCDTPDLVEAEITSFYSELFSSSKPSFDS--DILEGL 1239
            FH    QR+KRN +  L    G   +  D +E   TS++S +F+SS PS  S   ++  +
Sbjct: 357  FHHKASQRKKRNFVKGLFDGLGTWREEADHIENIFTSYFSSIFTSSNPSDLSLEAVMSVI 416

Query: 1240 PRSIEDSQARFLTRPVDKMEIRQALFELNPNKAPGPDG 1353
               + +     L  P  K EI  AL +++P KAPGPDG
Sbjct: 417  EPVVTEEHNLKLLEPFSKDEILAALQQMHPCKAPGPDG 454


>gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indica Group]
          Length = 1784

 Score =  207 bits (528), Expect = 7e-51
 Identities = 123/454 (27%), Positives = 217/454 (47%), Gaps = 4/454 (0%)
 Frame = +1

Query: 4    VWNCRGLGGPSTIPQIKEIVRSYHPSVFFICETKKKKTIISTVCRKLKCSDRWINVDSVG 183
            +WNCRG+G  +T+  +  + R     + F+CET++    +  +  +L     ++  +  G
Sbjct: 5    IWNCRGIGNAATVRDLCALSREAGSQLVFLCETRQSVERMRRLRSRLGLRG-FVGENCNG 63

Query: 184  KSGGMLVFWEPHVNI-LKVVKNNFCFE-IECEINDVHLWIVFVYINVDLRQRKDQWSYLK 357
             SGG+ +FW+  V + +K +   +    +   +ND    + FVY    +  R   WS L 
Sbjct: 64   MSGGLALFWDESVFVEIKGINERYIDAYVRLSVNDPIWHVTFVYGEPRVEHRHRMWSMLN 123

Query: 358  HASRDWGDRWIIGGDWNDITNPDEKKGGRQRNSFSCQAFNDFIGSLSLCEVKFSGYPFTW 537
               +     W++ GD+N+     E    ++R+    QAF D + +  L ++ F G P+T+
Sbjct: 124  SIKQSSNLPWLVLGDFNETLWQFEHFSKKKRSEVQMQAFRDVLQTYELHDLGFKGLPYTY 183

Query: 538  FNNREGEGYIEERLDRFLVSPSWMLEFSNAQVLHLLRSSSDHVLIMLD--PNPNKPKSKK 711
             N REG   +  RLDR +    W   F ++QV HL+   S+H  ++L    + N+P  +K
Sbjct: 184  DNKREGINNVRVRLDRVVADDGWRDMFRSSQVEHLISPCSNHCPVVLKFCVDTNQPARRK 243

Query: 712  RFCFDQRWLHMEGFDQIVERAWKYRIKGTPLFQIQAKIKQCRIDMLNWGKNAITNSTKQI 891
               ++  W       ++++ +W      + L  I   + Q    + +W +    N  ++I
Sbjct: 244  CLHYEIFWEREAELVEVIDESWAALGDKSDLADISRALSQVMAKLHSWSRRKCKNVGREI 303

Query: 892  GLISQKLESMNELGGIRDWKCWYDLKKDLHLAYEKEELYWRGKSRIQWLKQGDRNSKYFH 1071
                ++L  + E G   D +       +LH    +EE+ W  +SR+ WLK+GDRN+++FH
Sbjct: 304  EKGRKRLAELIESGA--DSRSIRSASDNLHELLYREEMLWLQRSRVNWLKEGDRNTRFFH 361

Query: 1072 ASVVQRQKRNAIDKLIGRNGQTCDTPDLVEAEITSFYSELFSSSKPSFDSDILEGLPRSI 1251
            +  V R K+N I KL  R G    T   +E   T ++ E+FS+      S +   + R +
Sbjct: 362  SKAVWRAKKNRITKLKDREGTVHSTTAKLEDMATEYFKEVFSADPLLDQSKVTRLIQRKV 421

Query: 1252 EDSQARFLTRPVDKMEIRQALFELNPNKAPGPDG 1353
              +    L     + EI  A+F++ P KAPGPDG
Sbjct: 422  SPAMNETLCSEFKEEEISNAMFQIGPLKAPGPDG 455



 Score =  102 bits (255), Expect = 3e-19
 Identities = 60/223 (26%), Positives = 102/223 (45%)
 Frame = +1

Query: 685  NPNKPKSKKRFCFDQRWLHMEGFDQIVERAWKYRIKGTPLFQIQAKIKQCRIDMLNWGKN 864
            N   P  +K   ++  W       ++++ +W      + L  I   + Q    + +W + 
Sbjct: 933  NGKSPARRKCLHYEIFWEREAELVEVIDESWAASGDKSDLADISRALSQVMAKLHSWSRR 992

Query: 865  AITNSTKQIGLISQKLESMNELGGIRDWKCWYDLKKDLHLAYEKEELYWRGKSRIQWLKQ 1044
               N  ++I    ++L  + E G   D         +LH    +EE+ W  +SR+ WLK+
Sbjct: 993  KCKNVGREIEKGRKRLAELIESGA--DSTSIRSASDNLHELLYREEMLWLQRSRVNWLKE 1050

Query: 1045 GDRNSKYFHASVVQRQKRNAIDKLIGRNGQTCDTPDLVEAEITSFYSELFSSSKPSFDSD 1224
            GDRN+++FH+  V R K+N I KL  R G    T   +E   T ++ E+FS+      S 
Sbjct: 1051 GDRNTRFFHSKAVWRAKKNRITKLKDREGTVHSTTAKLEDMATEYFKEVFSADPLLDQSK 1110

Query: 1225 ILEGLPRSIEDSQARFLTRPVDKMEIRQALFELNPNKAPGPDG 1353
            +   + R +  +    L     + EI  A+F++ P KA GPDG
Sbjct: 1111 VTRLIQRKVSPAMNETLCSEFKEEEISNAMFQIGPLKALGPDG 1153


>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
            Japonica Group]
          Length = 1382

 Score =  206 bits (525), Expect = 2e-50
 Identities = 127/457 (27%), Positives = 226/457 (49%), Gaps = 9/457 (1%)
 Frame = +1

Query: 10   NCRGLGGPSTIPQIKEIVRSYHPSVFFICETKKKKTIISTVCRKLKCSDRWINVDSVGKS 189
            NCRGLG  +T+ +++ +V+S  PS+ F+ ETK +      +   L  S  +  V   G S
Sbjct: 12   NCRGLGSAATVGELRWLVKSLRPSLVFLSETKMRDKQARNLMWSLGFSGSFA-VSCEGLS 70

Query: 190  GGMLVFWEPHVNILKVVKNNFCFEIECEINDVHLW-IVFVYINVDLRQRKDQWSYLKHAS 366
            GG+ +FW     +     N+   ++     ++  W I FVY       R   W+ L+   
Sbjct: 71   GGLALFWTTAYTVSLRGFNSHFIDVLVSTEELPPWRISFVYGEPKRELRHFFWNLLRRLH 130

Query: 367  RDWGDRWIIGGDWNDITNPDEKKGGRQRNSFSCQAFNDFIGSLSLCEVKFSGYPFTWFNN 546
              W   W+  GD+N++   DE  G R+R+    Q F   +    L ++ F G  FTW N 
Sbjct: 131  DQWRGPWLCCGDFNEVLCLDEHLGMRERSEPHMQHFRSCLDDCGLIDLGFVGPKFTWSNK 190

Query: 547  REGEGYIEERLDRFLVSPSWMLEFSNAQVLHLLRSSSDHVLIMLDPNPNKPKSKK----- 711
            ++     + RLDR + +  +   F +  V +++ +SSDH  I +D +      ++     
Sbjct: 191  QDANSNSKVRLDRAVANGEFSRYFEDCLVENVITTSSDHYAISIDLSRRNHGQRRIPIQQ 250

Query: 712  RFCFDQRWLHMEGFDQIVERAWKYRIKG-TPLFQIQAKIKQCRIDMLNWGKNAITNSTKQ 888
             F F+  WL  E + ++VE +W+    G   L  + + ++Q  + + +W K +  +  ++
Sbjct: 251  GFRFEAAWLRAEDYREVVENSWRISSAGCVGLRGVWSVLQQVAVSLKDWSKASFGSVRRK 310

Query: 889  IGLISQKLESMNELGGIRDWKCWYD--LKKDLHLAYEKEELYWRGKSRIQWLKQGDRNSK 1062
            I  + +KL+S+ +   + D     +  +++ L   +EKEE+  R +SR+ WL++GDRN+ 
Sbjct: 311  ILKMERKLKSLRQ-SPVNDVVIQEEKLIEQQLCELFEKEEIMARQRSRVDWLREGDRNTA 369

Query: 1063 YFHASVVQRQKRNAIDKLIGRNGQTCDTPDLVEAEITSFYSELFSSSKPSFDSDILEGLP 1242
            +FHA    R++ N I +L+  +G  C + + ++     FY  LFSS       ++L+ +P
Sbjct: 370  FFHARASARRRTNRIKELVRDDGSRCISQEGIKRMAEVFYENLFSSEPCDSMEEVLDAIP 429

Query: 1243 RSIEDSQARFLTRPVDKMEIRQALFELNPNKAPGPDG 1353
              + D     L +     EI+ ALF++   KAPGPDG
Sbjct: 430  NKVGDFINGELGKQYTNEEIKTALFQMGSTKAPGPDG 466


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
            (fragment)
          Length = 1365

 Score =  204 bits (520), Expect = 6e-50
 Identities = 131/456 (28%), Positives = 225/456 (49%), Gaps = 7/456 (1%)
 Frame = +1

Query: 7    WNCRGLGGPSTIPQIKEIVRSYHPSVFFICETKKKKTIISTVCRKLKCSDRWINVDSV-- 180
            WNC+GL  P TI  +KE+ + + P + F+ ETK  +  +     K+ C   W+  D +  
Sbjct: 5    WNCQGLRNPWTIRYLKEMKKDHFPDILFLMETKNSQDFVY----KVFC---WLGYDFIHT 57

Query: 181  ----GKSGGMLVFWEPHVNILKVVKNNFCFEIECEINDVHLWIVFVYINVDLRQRKDQWS 348
                G+SGG+ +FW+ H+ I  +  +    +++    +   +I  VY       R   W 
Sbjct: 58   VEPEGRSGGLAIFWKSHLEIEFLYADKNLMDLQVSSRNKVWFISCVYGLPVTHMRPKLWE 117

Query: 349  YLKHASRDWGDRWIIGGDWNDITNPDEKKGGRQRNSFSCQAFNDFIGSLSLCEVKFSGYP 528
            +L        + W + GD+NDI + DEK GG +R+  S Q F   + + S+ E+  +G  
Sbjct: 118  HLNSIGLKRAEAWCLIGDFNDIRSNDEKLGGPRRSPSSFQCFEHMLLNCSMHELGSTGNS 177

Query: 529  FTWFNNREGEGYIEERLDRFLVSPSWMLEFSNAQVLHLLRSSSDHVLIMLDPNPNKPKSK 708
            FTW  NR  + +++ +LDR   +P+W   F NA    L +  SDH  +++    +    +
Sbjct: 178  FTWGGNRNDQ-WVQCKLDRCFGNPAWFSIFPNAHQWFLEKFGSDHRPVLVKFTNDNELFR 236

Query: 709  KRFCFDQRWLHMEGFDQIVERAWKYRI-KGTPLFQIQAKIKQCRIDMLNWGKNAITNSTK 885
             +F +D+R        +++ R+W   + +GT        + +CR  +  W  ++ TN+  
Sbjct: 237  GQFRYDKRLDDDPYCIEVIHRSWNSAMSQGT--HSSFFSLIECRRAISVWKHSSDTNAQS 294

Query: 886  QIGLISQKLESMNELGGIRDWKCWYDLKKDLHLAYEKEELYWRGKSRIQWLKQGDRNSKY 1065
            +I  + + L++   +  I  W     +K  L LAY  EEL+WR KSR +WL  GD+N+ +
Sbjct: 295  RIKRLRKDLDAEKSI-QIPCWPRIEYIKDQLSLAYGDEELFWRQKSRQKWLAGGDKNTGF 353

Query: 1066 FHASVVQRQKRNAIDKLIGRNGQTCDTPDLVEAEITSFYSELFSSSKPSFDSDILEGLPR 1245
            FHA+V   + +N +  L+  N Q            +SF+  LF+S+     ++ LEGL  
Sbjct: 354  FHATVHSERLKNELSFLLDENDQEFTRNSDKGKIASSFFENLFTSTYILTHNNHLEGLQA 413

Query: 1246 SIEDSQARFLTRPVDKMEIRQALFELNPNKAPGPDG 1353
             +       L + V ++E+  A+F +N   APGPDG
Sbjct: 414  KVTSEMNHNLIQEVTELEVYNAVFSINKESAPGPDG 449


>gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japonica Group]
          Length = 1494

 Score =  204 bits (520), Expect = 6e-50
 Identities = 122/435 (28%), Positives = 209/435 (48%), Gaps = 3/435 (0%)
 Frame = +1

Query: 58   IVRSYHPSVFFICETKKKKTIISTVCRKLKCSDRWINVDSVGKSGGMLVFWEPHVNI-LK 234
            +V+++   + F+ ET++ +  +S +  +L    R   V+ VGK GG+ +FW+  + + LK
Sbjct: 269  MVQTHSSKIVFLSETRQDQFYVSNLKWRLGLR-RCFVVNGVGKGGGLALFWDESLKVELK 327

Query: 235  VVKNNFCFEIECEINDVHLWIVFVYINVDLRQRKDQWSYLKHASRDWGDRWIIGGDWNDI 414
                     I  E         FVY     + R + W+ L+    +  D W++ GD+N+ 
Sbjct: 328  SYNMRHIDVIITEPEGARWTATFVYGEPKAQNRHEMWNLLRRIRLNASDPWLMIGDFNEA 387

Query: 415  TNPDEKKGGRQRNSFSCQAFNDFIGSLSLCEVKFSGYPFTWFNNREGEGYIEERLDRFLV 594
                E +   + +    + F + +    L ++ F G P+T+ NN+     ++ RLDR + 
Sbjct: 388  MWQIEHRSRVKHSERQMRDFREVLVECDLQDIGFQGVPWTYDNNQASPNNVKVRLDRAVA 447

Query: 595  SPSWMLEFSNAQVLHLLRSSSDHVLIMLDPNPNKPKSK--KRFCFDQRWLHMEGFDQIVE 768
            SP W   F  A ++HL  + SDHV ++L+   N  + +  K  CF+  W  ++ F+ I  
Sbjct: 448  SPVWRAMFDQANIMHLTTACSDHVPLLLEKGGNMQQRRRSKINCFEAVWERVKSFNSIEH 507

Query: 769  RAWKYRIKGTPLFQIQAKIKQCRIDMLNWGKNAITNSTKQIGLISQKLESMNELGGIRDW 948
             +W        L  ++ K+     ++  W ++ I N  K I    ++LE M   G     
Sbjct: 508  ESWDDGGLAKNLGDVRTKLAYTMENLKRWSRDKIGNIKKSIERCRRELEEMRMRGREDSE 567

Query: 949  KCWYDLKKDLHLAYEKEELYWRGKSRIQWLKQGDRNSKYFHASVVQRQKRNAIDKLIGRN 1128
               + LK  L     +EE++W+ +SRI WLK+GDRN++YFH     R ++N I KL   +
Sbjct: 568  PDVHRLKIFLQELLHREEIWWKQRSRITWLKEGDRNTRYFHLKASWRARKNLIKKLRRSD 627

Query: 1129 GQTCDTPDLVEAEITSFYSELFSSSKPSFDSDILEGLPRSIEDSQARFLTRPVDKMEIRQ 1308
            G  C   + +     SF+ +L++  +     ++L      I D     LT+P    EI  
Sbjct: 628  GMMCSKEEELGEIARSFFRDLYTKDESLNPGELLNMFEPKITDEMNGMLTKPFTDEEISD 687

Query: 1309 ALFELNPNKAPGPDG 1353
            ALF++ P KAPGPDG
Sbjct: 688  ALFQIGPLKAPGPDG 702


>gb|EPS63383.1| hypothetical protein M569_11401 [Genlisea aurea]
          Length = 1469

 Score =  203 bits (516), Expect = 2e-49
 Identities = 128/459 (27%), Positives = 229/459 (49%), Gaps = 10/459 (2%)
 Frame = +1

Query: 7    WNCRGLGGPSTIPQIKEIVRSYHPSVFFICETKKKKTIISTVCRKLKCSDRW-INVDSVG 183
            WNCRGL   ST+ ++++++ S  PS+ F+ ETK    + S V    +C   + + V + G
Sbjct: 374  WNCRGLRSASTVRRLRDVISSDAPSMIFLSETK---CLASHVEWLKECLSYFGVAVSATG 430

Query: 184  KSGGMLVFWEPHVNILKVVKNNFCFEIECEIND-VHLW-IVFVYINVDLRQRKDQWSYLK 357
             SGG+ +FW   V +  +   +   ++   +   +  W     Y N  ++ R   W  L+
Sbjct: 431  LSGGLALFWRKDVCVSLLSFCSSYIDVLVRLTPTLPEWRFTGFYGNPAVQLRPRSWDLLR 490

Query: 358  HASRDWGDRWIIGGDWNDITNPDEKKGGRQRNSFSCQAFNDFIGSLSLCEVKFSGYPFTW 537
                     W++ GD+N++   +E +    R +   +AF D +    L ++ F+G+PFTW
Sbjct: 491  QIRHHSICPWLVAGDFNEVVMQNEVESLNSRPASQMRAFRDALLDCQLQDIGFTGFPFTW 550

Query: 538  FNNREGEGYIEERLDRFLVSPSWMLEFSNAQVLHLLRSSSDHVLIMLDPNPNKPKS---- 705
             N R+    +  RLDR + + +W   F  A V HL   SSDH+ +++  +P  P S    
Sbjct: 551  CNKRKAPDTVRARLDRAVATTTWNNLFPRAIVKHLPYGSSDHLPLLIFLDPAAPTSIRPN 610

Query: 706  KKRFCFDQRWLHMEGFDQIVERAWKYRIKGTPLFQIQAKIKQCRIDMLNWGKNAITNSTK 885
            K+RF F+  W  + G   ++ ++W    + T       +I++ R+ +L W ++ +     
Sbjct: 611  KRRFKFEAFWTTIPGCADVIHQSWAPNSQPT---NFNYRIQKTRMSLLKWYQSKVGPIKS 667

Query: 886  QIGLISQKLESMNELGGIRDWK-CWYDLKKDLHLAYEKEELYWRGKSRIQWLKQGDRNSK 1062
            ++  I+ +L+ +       D K C   LK++    +++EE+YW+ + +I WL+ GDRN+ 
Sbjct: 668  RLQKIATELDLLARQSITDDIKHCESALKEEQASLWKQEEMYWKQRGKIHWLRCGDRNTA 727

Query: 1063 YFHASVVQRQKRNAIDKLIGRNGQTCDTPDLVEAEITSFYSELFSSSKPS--FDSDILEG 1236
            +FHAS  +++ +N I  +   +G        V   + S+Y +LF+SS P        L  
Sbjct: 728  FFHASASEKRTQNRIAGIKNAHGLWITRGPEVITTMLSYYQDLFTSSPPDPIEMERALSI 787

Query: 1237 LPRSIEDSQARFLTRPVDKMEIRQALFELNPNKAPGPDG 1353
            +PR+I D     L RP +  E+  A+  + P  +PGPDG
Sbjct: 788  IPRTITDDMRAILERPYNAAEVWPAVRRMKPLSSPGPDG 826


>gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
          Length = 1874

 Score =  202 bits (515), Expect = 2e-49
 Identities = 118/402 (29%), Positives = 198/402 (49%), Gaps = 3/402 (0%)
 Frame = +1

Query: 157  RWINVDSVGKSGGMLVFWEPHVNILKVVKNNFCFEIECEINDVHLW-IVFVYINVDLRQR 333
            R   V+ VGK GG+ +FW+  +N++    N+   ++     D   W   F+Y     + R
Sbjct: 10   RCFTVNGVGKGGGLALFWDESMNVVLKSYNSRHIDVLITELDCCTWRATFLYGEPRAQDR 69

Query: 334  KDQWSYLKHASRDWGDRWIIGGDWNDITNPDEKKGGRQRNSFSCQAFNDFIGSLSLCEVK 513
               WS L+    + GD W++ GD+N+     E K  R+R+    + F + +    L ++ 
Sbjct: 70   HLMWSLLRRIRSNSGDPWLMIGDFNEAMWQTEHKSHRKRSESQMRDFREVLSECDLHDIG 129

Query: 514  FSGYPFTWFN-NREGEGYIEERLDRFLVSPSWMLEFSNAQVLHLLRSSSDHVLIMLDPNP 690
            F G P+T+ N  REG   ++ RLDR + SP+W   F  A + HL   SSDH  ++L+   
Sbjct: 130  FQGAPWTFCNMQREGRN-VKVRLDRGVASPAWSSRFPQAVITHLTTPSSDHAPLLLEREE 188

Query: 691  NK-PKSKKRFCFDQRWLHMEGFDQIVERAWKYRIKGTPLFQIQAKIKQCRIDMLNWGKNA 867
                +  K   +++ W       ++++ AW      + L  I  K+K     +++W K+ 
Sbjct: 189  TTLARPMKIMRYEEVWERESSLPEVIQEAWTMGADASTLGDINDKMKVTMTKLVSWSKDK 248

Query: 868  ITNSTKQIGLISQKLESMNELGGIRDWKCWYDLKKDLHLAYEKEELYWRGKSRIQWLKQG 1047
            I N  K+I  + +KL  +  +G +      + +KK+L     +EE++W+ +SRI WLK+G
Sbjct: 249  IGNVRKKIKDLREKLGELRNIGLLDTDNEVHSVKKELEEMLHREEIWWKQRSRITWLKEG 308

Query: 1048 DRNSKYFHASVVQRQKRNAIDKLIGRNGQTCDTPDLVEAEITSFYSELFSSSKPSFDSDI 1227
            D N++YFH     R K+N I KL   +G T      ++    SF+ +L++        ++
Sbjct: 309  DLNTRYFHLKASWRAKKNKIKKLKKNDGSTTMNKKEMKEISRSFFQQLYTKDDNLNPVNL 368

Query: 1228 LEGLPRSIEDSQARFLTRPVDKMEIRQALFELNPNKAPGPDG 1353
            L      I +     L +P    EI  ALF++ P KAPGPDG
Sbjct: 369  LNMFHEKISEQMNADLIKPFTDEEISDALFQIGPLKAPGPDG 410