BLASTX nr result

ID: Rehmannia25_contig00014647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00014647
         (596 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006338856.1| PREDICTED: poly(A) RNA polymerase cid11-like...    56   6e-06

>ref|XP_006338856.1| PREDICTED: poly(A) RNA polymerase cid11-like isoform X1 [Solanum
           tuberosum] gi|565343469|ref|XP_006338857.1| PREDICTED:
           poly(A) RNA polymerase cid11-like isoform X2 [Solanum
           tuberosum] gi|565343471|ref|XP_006338858.1| PREDICTED:
           poly(A) RNA polymerase cid11-like isoform X3 [Solanum
           tuberosum] gi|565343473|ref|XP_006338859.1| PREDICTED:
           poly(A) RNA polymerase cid11-like isoform X4 [Solanum
           tuberosum]
          Length = 453

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 19/131 (14%)
 Frame = +3

Query: 6   QATRGILVSANSNQASLVSVLVGPHISRFIIRTAASSSS------TPVIAQSASRTPPLR 167
           ++T  +L S+N N+  ++S LV PH+S+F+ RT+ + ++       P +    +  PP +
Sbjct: 324 RSTHFMLCSSNQNENEIISTLVKPHVSKFVARTSGNQNNYSRNGLRPQLQAQRAIKPPFQ 383

Query: 168 RNGFNGRPERKQTTPLQTQHRSQNK----------GVDNKRQN---GAPMNGPMHASTSQ 308
            +    + +R    PL+ QH+ Q +           + +KR N    +   GP  A   Q
Sbjct: 384 AH-HQRQAQRAIHPPLRAQHQPQAQRPINPPLQAHQLQDKRMNRNQNSTAQGPTQAIRVQ 442

Query: 309 KQQVWRPRSEK 341
            Q VWRP+S++
Sbjct: 443 TQTVWRPKSDR 453


Top