BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00014421
         (667 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e...   172   4e-51
gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sa...   168   2e-47
emb|CAE04934.2| OSJNBa0017P10.11 [Oryza sativa Japonica Group]        165   2e-47
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]        159   5e-47
gb|ADB85290.1| putative retrotransposon protein [Phyllostachys e...   155   1e-46
gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]      161   2e-46
gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group]     155   2e-46
gb|ABF98227.1| retrotransposon protein, putative, unclassified [...   155   2e-46
gb|ABA97403.1| retrotransposon protein, putative, unclassified [...   155   5e-46
ref|XP_006475543.1| PREDICTED: uncharacterized protein LOC102610...   154   3e-45
emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]                152   3e-44
gb|ABA93896.1| retrotransposon protein, putative, unclassified [...   155   4e-44
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g...   149   8e-44
gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japo...   149   8e-44
ref|NP_001175365.1| Os08g0123950 [Oryza sativa Japonica Group] g...   155   2e-43
gb|AAP68381.1| putative polyprotein [Oryza sativa Japonica Group...   152   2e-43
gb|AAP54937.2| retrotransposon protein, putative, unclassified [...   150   5e-43
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]        144   7e-43
gb|ABA95357.2| retrotransposon protein, putative, unclassified [...   149   7e-42
gb|AAM51835.1|AC105730_9 Putative plant disease resistance polyp...   146   7e-42

>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1348

 Score =  172 bits (436), Expect(2) = 4e-51
 Identities = 88/197 (44%), Positives = 123/197 (62%), Gaps = 4/197 (2%)
 Frame = +1

Query: 1    K*LLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQTCAALAIVIPS 180
            K + DQKV   IQ K + +LL  D  I+Y+KG +N+ ADALSR+G  +    A++I +PS
Sbjct: 806  KFMTDQKVAEGIQHKLMLRLLEFDYTIEYKKGKENKVADALSRRGNSVM---AISIAVPS 862

Query: 181  WVQKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQLRELILHE 360
            W++ V  SY ND + ++++   TL PN  + + L  G LRYKGR+ VG D +LR  I+H 
Sbjct: 863  WIEAVTNSYQNDANCKELMEQLTLAPNADSGYTLNAGVLRYKGRIYVGKDPELRLNIIHS 922

Query: 361  MHGSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVRSKNKPDHGPYPGLLQPLP 540
            +H S   GHS    TY R+K + YWP MKK++   V+ C V  ++K +H  YPGLL+PLP
Sbjct: 923  LHMSAVGGHSGRVATYQRVKHLFYWPGMKKEIHTMVRECAVCQRSKAEHCHYPGLLEPLP 982

Query: 541  IPSQA*TH----YIHGL 579
            IP  A TH    +I GL
Sbjct: 983  IPDMAWTHISMDFIEGL 999



 Score = 55.8 bits (133), Expect(2) = 4e-51
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = +2

Query: 566  ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLAL 667
            ISMDFIEGLPSS GK+VI VVVDRFTKY H + L
Sbjct: 991  ISMDFIEGLPSSKGKEVIFVVVDRFTKYAHSVPL 1024


>gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1608

 Score =  168 bits (425), Expect(2) = 2e-47
 Identities = 82/183 (44%), Positives = 122/183 (66%)
 Frame = +1

Query: 7    LLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQTCAALAIVIPSWV 186
            L +Q++ TP QQK  TKLLGL  +I YRKG  N AADALSR+  PI   AA++  IPSW+
Sbjct: 1009 LTEQRLHTPWQQKAFTKLLGLQYKICYRKGVSNAAADALSRRESPISEVAAISECIPSWM 1068

Query: 187  QKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQLRELILHEMH 366
            Q+++Q Y  D   ++++A   + PN+  D+ L  G L+YKG++ VG++T L+  +++E+H
Sbjct: 1069 QELMQGYQLDGQSKQLLAELAISPNSRKDYQLCQGILKYKGKIWVGNNTALQHKLVNELH 1128

Query: 367  GSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVRSKNKPDHGPYPGLLQPLPIP 546
             +   GHS    TY ++K +  WP MKK + E +++C+V  + KPD   YPGLLQPLP+P
Sbjct: 1129 ATPLGGHSGFPVTYRKVKSLFAWPGMKKLIKEQLQSCQVCLQAKPDRARYPGLLQPLPVP 1188

Query: 547  SQA 555
            + A
Sbjct: 1189 AGA 1191



 Score = 47.8 bits (112), Expect(2) = 2e-47
 Identities = 22/34 (64%), Positives = 26/34 (76%)
 Frame = +2

Query: 566  ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLAL 667
            IS+DFIEGLP S     ILVVVD+F+KY HF+ L
Sbjct: 1195 ISLDFIEGLPRSSHYNCILVVVDKFSKYSHFIPL 1228


>emb|CAE04934.2| OSJNBa0017P10.11 [Oryza sativa Japonica Group]
          Length = 1012

 Score =  165 bits (417), Expect(2) = 2e-47
 Identities = 81/182 (44%), Positives = 116/182 (63%), Gaps = 1/182 (0%)
 Frame = +1

Query: 13  DQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQG-VPIQTCAALAIVIPSWVQ 189
           DQ++ T  QQK  TKL+GL  +++YRKG  N AADALSR   +P     A+++  P W+Q
Sbjct: 406 DQRLHTSWQQKAFTKLMGLQYKVRYRKGISNAAADALSRNDTIPSSEVLAVSVCTPLWLQ 465

Query: 190 KVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQLRELILHEMHG 369
           +VV+ Y  D    +I+A   + P     F L+ G LRYKGR+ +G++TQL+ +I+ E+H 
Sbjct: 466 EVVKGYEPDTYTSQILAELVVHPTARKHFTLSQGLLRYKGRIWIGNNTQLQHIIIDELHS 525

Query: 370 STYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVRSKNKPDHGPYPGLLQPLPIPS 549
           S   GHS +  TY R K +  WP+MKK ++  +K C+V  ++KPD   YPGLLQPLP+P 
Sbjct: 526 SFMGGHSGIPVTYRRAKALFAWPSMKKMILSLLKQCQVCLQSKPDRAKYPGLLQPLPVPE 585

Query: 550 QA 555
            A
Sbjct: 586 GA 587



 Score = 50.8 bits (120), Expect(2) = 2e-47
 Identities = 22/35 (62%), Positives = 28/35 (80%)
 Frame = +2

Query: 563 IISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLAL 667
           ++S+DFIEGLP S G   ILVVVD+F+KY HF+ L
Sbjct: 590 VVSLDFIEGLPKSHGFNCILVVVDKFSKYAHFIPL 624


>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
          Length = 1311

 Score =  159 bits (402), Expect(2) = 5e-47
 Identities = 82/194 (42%), Positives = 113/194 (58%), Gaps = 5/194 (2%)
 Frame = +1

Query: 13   DQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVP-IQTCAALAIVIPSWVQ 189
            +Q++   IQ K + KLL  D +I+Y+KG +N+AADALSR  +P +    +  I++P+W+ 
Sbjct: 783  EQRLTEGIQHKLLIKLLSYDYKIEYKKGKENKAADALSR--IPSVAQLFSTTIIVPTWIT 840

Query: 190  KVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQLRELILHEMHG 369
            +++ SY  DP    + +   + P  +  + LT G LRYK RL VG+ T LR  +    H 
Sbjct: 841  EILASYATDPKCTALESQLRITPQGHPPYTLTSGILRYKNRLYVGAGTDLRAKLQQSFHD 900

Query: 370  STYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVRSKNKPDHGPYPGLLQPLPIPS 549
            S   GHS    TY R K + YWP MKKD+  +VK C V  KNK +H   PGLL PLPIP 
Sbjct: 901  SALGGHSGERATYQRAKLLFYWPGMKKDIASYVKLCPVCQKNKSEHNLQPGLLHPLPIPE 960

Query: 550  QA*TH----YIHGL 579
             A TH    +I GL
Sbjct: 961  MAWTHISMDFIEGL 974



 Score = 55.5 bits (132), Expect(2) = 5e-47
 Identities = 26/34 (76%), Positives = 28/34 (82%)
 Frame = +2

Query: 566  ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLAL 667
            ISMDFIEGLP S  K VI V+VDRFTKY HF+AL
Sbjct: 966  ISMDFIEGLPKSDNKDVIWVIVDRFTKYAHFVAL 999


>gb|ADB85290.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 592

 Score =  155 bits (391), Expect(2) = 1e-46
 Identities = 81/197 (41%), Positives = 120/197 (60%), Gaps = 4/197 (2%)
 Frame = +1

Query: 1   K*LLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQTCAALAIVIPS 180
           K + +Q ++  +Q K + KLLG + +++Y++G +N+A DALSR     Q   A++ V P 
Sbjct: 189 KYMQEQIIIEGVQHKLLVKLLGYNYKVEYKRGRENKATDALSRVRYNDQV-VAISAVTPV 247

Query: 181 WVQKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQLRELILHE 360
           W+ +V+ SY  D   + +I   ++ P    ++ L +G LRYKGRL +GS+T L+  +L  
Sbjct: 248 WILEVLASYEGDEKCRDLITQISISPTAQPNYSLKNGILRYKGRLYIGSNTGLKRQLLVT 307

Query: 361 MHGSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVRSKNKPDHGPYPGLLQPLP 540
            H S   GHS    TY RLK + +WP MK++V E+VK  +V  KN  +H PYPGLLQP+P
Sbjct: 308 FHDSALGGHSGGRVTYQRLKLIFHWPRMKQEVEEFVKLYDVCQKNNCEHVPYPGLLQPIP 367

Query: 541 IPSQA*TH----YIHGL 579
           IP  A TH    +I GL
Sbjct: 368 IPEMAWTHISMDFIEGL 384



 Score = 58.5 bits (140), Expect(2) = 1e-46
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = +2

Query: 566 ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLAL 667
           ISMDFIEGLP S  K+VILVVVDRFTKY HF+AL
Sbjct: 376 ISMDFIEGLPKSEDKEVILVVVDRFTKYSHFIAL 409


>gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
          Length = 2396

 Score =  161 bits (408), Expect(2) = 2e-46
 Identities = 78/183 (42%), Positives = 118/183 (64%)
 Frame = +1

Query: 7    LLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQTCAALAIVIPSWV 186
            L +Q++ T  QQK  TKL GL  +I YRKG  N AADALSR+      C A++  +P+W+
Sbjct: 1011 LNEQRLHTIWQQKMYTKLAGLQYKIVYRKGVDNGAADALSRKVQEDSHCCAISHSVPTWL 1070

Query: 187  QKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQLRELILHEMH 366
            Q+VV+ Y  DP+ ++++A   L+    A F L  G +R+K R+ +G + QL++ +L  MH
Sbjct: 1071 QEVVEGYDKDPTSKQLLAQLILNSADKAPFSLHQGIIRHKNRIWLGGNLQLQQKVLQAMH 1130

Query: 367  GSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVRSKNKPDHGPYPGLLQPLPIP 546
             +   GHS    TY ++K++ YWP M+ DV+++V++C V  ++KPD   YPGLLQPL +P
Sbjct: 1131 DTAVGGHSGAPATYHKVKQMFYWPGMRADVLQYVQSCTVCQQSKPDRAKYPGLLQPLEVP 1190

Query: 547  SQA 555
             QA
Sbjct: 1191 PQA 1193



 Score = 50.8 bits (120), Expect(2) = 2e-46
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +2

Query: 566  ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLAL 667
            IS+DFIEGLP S     ILVVVD+F+KYGHFL L
Sbjct: 1197 ISLDFIEGLPRSAHYNCILVVVDKFSKYGHFLPL 1230


>gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1246

 Score =  155 bits (392), Expect(2) = 2e-46
 Identities = 81/197 (41%), Positives = 111/197 (56%), Gaps = 4/197 (2%)
 Frame = +1

Query: 1    K*LLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQTCAALAIVIPS 180
            K +  Q++   IQ K + KL+  D  I+Y+KG +N+AADALSR+      C A+ +V P+
Sbjct: 780  KFMATQRLTEGIQHKLLLKLMEFDYSIEYKKGKENKAADALSRRDTDGDKCLAITLVYPA 839

Query: 181  WVQKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQLRELILHE 360
            WV+ V  +Y  D  + K++    L+      F L  G LRYK R+ VG  T +R+ +L  
Sbjct: 840  WVEDVKNNYMGDEKYAKLVTGEELNEGAEG-FTLQSGLLRYKNRIYVGQSTDIRQRLLQS 898

Query: 361  MHGSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVRSKNKPDHGPYPGLLQPLP 540
             H ST+ GHS +  TY +LK++ YWP MKKDV   V  C      KP+H   PGLL PL 
Sbjct: 899  FHNSTFGGHSGMKVTYHKLKKIFYWPKMKKDVDRQVTECPTCQIAKPEHIHVPGLLDPLQ 958

Query: 541  IPSQA*TH----YIHGL 579
            IP  A TH    +I GL
Sbjct: 959  IPEMAWTHISMDFIEGL 975



 Score = 57.0 bits (136), Expect(2) = 2e-46
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = +2

Query: 566  ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLAL 667
            ISMDFIEGLP S GK VILVVVDR TKY HF+A+
Sbjct: 967  ISMDFIEGLPKSHGKDVILVVVDRLTKYAHFVAM 1000


>gb|ABF98227.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1160

 Score =  155 bits (392), Expect(2) = 2e-46
 Identities = 81/197 (41%), Positives = 111/197 (56%), Gaps = 4/197 (2%)
 Frame = +1

Query: 1    K*LLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQTCAALAIVIPS 180
            K +  Q++   IQ K + KL+  D  I+Y+KG +N+AADALSR+      C A+ +V P+
Sbjct: 694  KFMATQRLTEGIQHKLLLKLMEFDYSIEYKKGKENKAADALSRRDTDGDKCLAITLVYPA 753

Query: 181  WVQKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQLRELILHE 360
            WV+ V  +Y  D  + K++    L+      F L  G LRYK R+ VG  T +R+ +L  
Sbjct: 754  WVEDVKNNYMGDEKYAKLVTGEELNEGAEG-FTLQSGLLRYKNRIYVGQSTDIRQRLLQS 812

Query: 361  MHGSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVRSKNKPDHGPYPGLLQPLP 540
             H ST+ GHS +  TY +LK++ YWP MKKDV   V  C      KP+H   PGLL PL 
Sbjct: 813  FHNSTFGGHSGMKVTYHKLKKIFYWPKMKKDVDRQVTECPTCQIAKPEHIHVPGLLDPLQ 872

Query: 541  IPSQA*TH----YIHGL 579
            IP  A TH    +I GL
Sbjct: 873  IPEMAWTHISMDFIEGL 889



 Score = 57.0 bits (136), Expect(2) = 2e-46
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = +2

Query: 566 ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLAL 667
           ISMDFIEGLP S GK VILVVVDR TKY HF+A+
Sbjct: 881 ISMDFIEGLPKSHGKDVILVVVDRLTKYAHFVAM 914


>gb|ABA97403.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 562

 Score =  155 bits (393), Expect(2) = 5e-46
 Identities = 80/194 (41%), Positives = 113/194 (58%), Gaps = 5/194 (2%)
 Frame = +1

Query: 13  DQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVP-IQTCAALAIVIPSWVQ 189
           +Q++   IQ K + KLL  + +I+Y+KG +N+AADALSR  +P +    +  I++P+W+ 
Sbjct: 196 EQRLTKGIQHKLLIKLLNYNYKIEYKKGKENKAADALSR--IPFVAQWFSTTIIVPTWII 253

Query: 190 KVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQLRELILHEMHG 369
           +++ SY  DP    + +   + P  +  + LT G LRYK RL VG+ T LR  +    H 
Sbjct: 254 EILASYATDPKCTALESQLRITPQGHPSYTLTGGILRYKNRLYVGAGTDLRAKLQQSFHD 313

Query: 370 STYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVRSKNKPDHGPYPGLLQPLPIPS 549
           S   GHS    TY R K + YWP MKKD+  +VK C V  KNK +H   PGLL PLP+P 
Sbjct: 314 SALGGHSGERATYQRAKLLFYWPGMKKDIASYVKLCPVCQKNKSEHNLQPGLLHPLPVPE 373

Query: 550 QA*TH----YIHGL 579
            A TH    +I GL
Sbjct: 374 MAWTHISMDFIEGL 387



 Score = 55.5 bits (132), Expect(2) = 5e-46
 Identities = 26/34 (76%), Positives = 28/34 (82%)
 Frame = +2

Query: 566 ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLAL 667
           ISMDFIEGLP S  K VI V+VDRFTKY HF+AL
Sbjct: 379 ISMDFIEGLPKSDNKDVIWVIVDRFTKYAHFVAL 412


>ref|XP_006475543.1| PREDICTED: uncharacterized protein LOC102610887 [Citrus sinensis]
          Length = 1274

 Score =  154 bits (389), Expect(2) = 3e-45
 Identities = 77/184 (41%), Positives = 115/184 (62%), Gaps = 2/184 (1%)
 Frame = +1

Query: 1    K*LLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQTCAALAIVIPS 180
            K +L+Q++ TP+QQKW+TKL+G D EI +R G +N+AADALSR     +    +AI +P 
Sbjct: 789  KYMLEQRISTPMQQKWLTKLIGYDFEIIFRSGRENKAADALSRLQESTENAMVMAISLPI 848

Query: 181  --WVQKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQLRELIL 354
              WV+++ Q + +DP  QK+I     +   ++ F   +  L+YKGRL VG  + L++LI+
Sbjct: 849  GVWVEQLKQEWQHDPEIQKLIQEIVTNSARHSKFTWENHLLKYKGRLWVGKHSALKQLIM 908

Query: 355  HEMHGSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVRSKNKPDHGPYPGLLQP 534
             E HG T  GHS V  T  R+K   YW  M++++  +V  C+   +NK ++   PGLLQP
Sbjct: 909  SEAHGGTEGGHSGVRKTLDRVKRSFYWKRMQREICSFVAACDNCQRNKHENVLSPGLLQP 968

Query: 535  LPIP 546
            LPIP
Sbjct: 969  LPIP 972



 Score = 54.3 bits (129), Expect(2) = 3e-45
 Identities = 24/34 (70%), Positives = 28/34 (82%)
 Frame = +2

Query: 566  ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLAL 667
            ISMDFIEGLP S GK++I VVVDR +KY HF+ L
Sbjct: 979  ISMDFIEGLPKSSGKQIIFVVVDRLSKYAHFMPL 1012


>emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]
          Length = 1602

 Score =  152 bits (383), Expect(2) = 3e-44
 Identities = 77/181 (42%), Positives = 113/181 (62%), Gaps = 1/181 (0%)
 Frame = +1

Query: 7    LLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQT-CAALAIVIPSW 183
            L DQ++ TP Q K  TKLLGL  +I YRKG+ N AADALSR+     +   A++  +P W
Sbjct: 992  LSDQRLHTPWQHKAFTKLLGLQYKICYRKGSSNAAADALSRKFQDSNSEIFAISSSVPQW 1051

Query: 184  VQKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQLRELILHEM 363
            + +V Q Y  D    K+++T  + P  +  + L +G +RYK R+ VG++ +L+  ++ E+
Sbjct: 1052 LMEVTQGYEKDAQAAKLLSTLAIHPEKHIHYFLDNGIIRYKNRIWVGNNPELQLKLIREL 1111

Query: 364  HGSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVRSKNKPDHGPYPGLLQPLPI 543
            H S   GHS    TY ++K++  WPNMKK + E V+ C+V  + KPD   YPGLLQPLP+
Sbjct: 1112 HASPVGGHSGFPVTYRKIKQLFAWPNMKKMIKESVQRCQVCLQAKPDRLKYPGLLQPLPV 1171

Query: 544  P 546
            P
Sbjct: 1172 P 1172



 Score = 53.5 bits (127), Expect(2) = 3e-44
 Identities = 24/34 (70%), Positives = 28/34 (82%)
 Frame = +2

Query: 566  ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLAL 667
            +S+DFIEGLP S G   ILVVVDRF+KY HF+AL
Sbjct: 1179 VSLDFIEGLPKSAGYNCILVVVDRFSKYAHFVAL 1212


>gb|ABA93896.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 897

 Score =  155 bits (391), Expect(2) = 4e-44
 Identities = 80/183 (43%), Positives = 114/183 (62%), Gaps = 2/183 (1%)
 Frame = +1

Query: 13  DQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSR--QGVPIQTCAALAIVIPSWV 186
           DQ++ TP QQK +TKLLGL  ++QY+KG  N+AADALSR  Q  P+Q CA L+ V+P W+
Sbjct: 367 DQRLATPWQQKAMTKLLGLQYKLQYKKGLDNKAADALSRYPQTDPMQICA-LSAVVPLWL 425

Query: 187 QKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQLRELILHEMH 366
            +V + Y  +P+ ++++    L P+ Y  + +  G L YKGR+ VGS+  L+  IL  +H
Sbjct: 426 NEVQEGYKTEPATEQLLTQVLLSPDQYPHYTMQQGVLLYKGRILVGSNPALQHRILTALH 485

Query: 367 GSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVRSKNKPDHGPYPGLLQPLPIP 546
            S   GHS +  TY R+K +  W  +K+ V  +V  C V    K +   YPGLLQPLP+P
Sbjct: 486 ASAIGGHSGIQVTYSRVKWLFAWTGLKRAVQTFVTDCAVCKHAKSERMRYPGLLQPLPVP 545

Query: 547 SQA 555
            QA
Sbjct: 546 DQA 548



 Score = 50.1 bits (118), Expect(2) = 4e-44
 Identities = 22/34 (64%), Positives = 27/34 (79%)
 Frame = +2

Query: 566 ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLAL 667
           +S+DFIEGLP S G   ILVVVD+F++Y HFL L
Sbjct: 552 VSLDFIEGLPKSSGFDCILVVVDKFSRYAHFLGL 585


>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
           gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
           Japonica Group]
          Length = 866

 Score =  149 bits (377), Expect(2) = 8e-44
 Identities = 77/195 (39%), Positives = 114/195 (58%), Gaps = 6/195 (3%)
 Frame = +1

Query: 13  DQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQTCAALA--IVIPSWV 186
           +Q++   +Q K + KLL  D +I+Y+KG +N+AADALSR    +Q   AL   +++P W+
Sbjct: 339 EQRITEGVQHKLLIKLLSYDYKIEYKKGQENKAADALSR----MQQLNALTTTVIVPQWI 394

Query: 187 QKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQLRELILHEMH 366
            +V  SY+ DP   ++ +   + P ++  + L  G LRYK  + VG+   LRE +L   H
Sbjct: 395 TEVAASYSTDPKCHELESHLHIAPQSHPPYTLKGGILRYKDHIVVGAGNTLREQLLVSFH 454

Query: 367 GSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVRSKNKPDHGPYPGLLQPLPIP 546
            S   GHS    TY R+K++ YWP MK  V ++VK C V  KNK +H    GLLQPLP+P
Sbjct: 455 DSALGGHSGERATYQRMKQLFYWPGMKLAVTQFVKACPVCQKNKTEHNMPAGLLQPLPLP 514

Query: 547 SQA*TH----YIHGL 579
             A +H    ++ GL
Sbjct: 515 EMAWSHITMDFVEGL 529



 Score = 54.3 bits (129), Expect(2) = 8e-44
 Identities = 24/34 (70%), Positives = 28/34 (82%)
 Frame = +2

Query: 566 ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLAL 667
           I+MDF+EGLP S GK VI V+VDRFTKY HF+ L
Sbjct: 521 ITMDFVEGLPKSEGKDVIWVIVDRFTKYAHFIPL 554


>gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japonica Group]
          Length = 645

 Score =  149 bits (377), Expect(2) = 8e-44
 Identities = 77/195 (39%), Positives = 114/195 (58%), Gaps = 6/195 (3%)
 Frame = +1

Query: 13  DQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQTCAALA--IVIPSWV 186
           +Q++   +Q K + KLL  D +I+Y+KG +N+AADALSR    +Q   AL   +++P W+
Sbjct: 118 EQRITEGVQHKLLIKLLSYDYKIEYKKGQENKAADALSR----MQQLNALTTTVIVPQWI 173

Query: 187 QKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQLRELILHEMH 366
            +V  SY+ DP   ++ +   + P ++  + L  G LRYK  + VG+   LRE +L   H
Sbjct: 174 TEVAASYSTDPKCHELESHLHIAPQSHPPYTLKGGILRYKDHIVVGAGNTLREQLLVSFH 233

Query: 367 GSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVRSKNKPDHGPYPGLLQPLPIP 546
            S   GHS    TY R+K++ YWP MK  V ++VK C V  KNK +H    GLLQPLP+P
Sbjct: 234 DSALGGHSGERATYQRMKQLFYWPGMKLAVTQFVKACPVCQKNKTEHNMPAGLLQPLPLP 293

Query: 547 SQA*TH----YIHGL 579
             A +H    ++ GL
Sbjct: 294 EMAWSHITMDFVEGL 308



 Score = 54.3 bits (129), Expect(2) = 8e-44
 Identities = 24/34 (70%), Positives = 28/34 (82%)
 Frame = +2

Query: 566 ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLAL 667
           I+MDF+EGLP S GK VI V+VDRFTKY HF+ L
Sbjct: 300 ITMDFVEGLPKSEGKDVIWVIVDRFTKYAHFIPL 333


>ref|NP_001175365.1| Os08g0123950 [Oryza sativa Japonica Group]
           gi|255678117|dbj|BAH94093.1| Os08g0123950, partial
           [Oryza sativa Japonica Group]
          Length = 783

 Score =  155 bits (391), Expect(2) = 2e-43
 Identities = 82/186 (44%), Positives = 115/186 (61%), Gaps = 3/186 (1%)
 Frame = +1

Query: 7   LLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQT---CAALAIVIP 177
           L DQ++ TP Q K  TKLLGL  +I YRKG+ N AADALSR+  P Q+     A++  +P
Sbjct: 177 LSDQRLHTPWQHKAFTKLLGLQYKICYRKGSTNAAADALSRK--PQQSEEEFNAISQCVP 234

Query: 178 SWVQKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQLRELILH 357
            W+ +V+QSY  DP   +++A  TL+PN+   F L  G LRYKG + +G+   L+  I++
Sbjct: 235 QWLMEVLQSYDTDPHATQLVAALTLNPNSKPHFSLQHGVLRYKGNIWIGNSPDLQLKIIN 294

Query: 358 EMHGSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVRSKNKPDHGPYPGLLQPL 537
           EMH S   GHS    TY R+K++  W  MK  + E +  C++ ++ KPD   YP LLQPL
Sbjct: 295 EMHASPVGGHSGFPVTYRRIKQLFAWNGMKSQIKETLANCQICAQAKPDRSRYPRLLQPL 354

Query: 538 PIPSQA 555
           P+P  A
Sbjct: 355 PVPKGA 360



 Score = 47.8 bits (112), Expect(2) = 2e-43
 Identities = 22/34 (64%), Positives = 26/34 (76%)
 Frame = +2

Query: 566 ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLAL 667
           IS+DFIEGLP S     ILVVVD+F+KY HF+ L
Sbjct: 364 ISLDFIEGLPRSSHYNCILVVVDKFSKYSHFIPL 397


>gb|AAP68381.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108710435|gb|ABF98230.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1118

 Score =  152 bits (384), Expect(2) = 2e-43
 Identities = 78/182 (42%), Positives = 113/182 (62%), Gaps = 1/182 (0%)
 Frame = +1

Query: 13   DQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVP-IQTCAALAIVIPSWVQ 189
            DQ++ T  QQK +TKLLGL  ++ YRKG +NRAADALSR   P I   +AL++ +PSW+ 
Sbjct: 575  DQRLATLWQQKALTKLLGLQYKLVYRKGVENRAADALSRCDSPEILQLSALSVCVPSWLD 634

Query: 190  KVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQLRELILHEMHG 369
            +V  SY + P    +++   L P +   F +TDG LRYKGR+ +G +  L++ +L  +H 
Sbjct: 635  EVRDSYASHPHTSSLLSQVLLQPESAPHFSVTDGVLRYKGRIWLGHNVGLQQKVLGALHN 694

Query: 370  STYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVRSKNKPDHGPYPGLLQPLPIPS 549
            +    HS V  TY RL+ +  WP +KK V  +V +C +  + K +   YPGLLQPLP+P 
Sbjct: 695  AAVGDHSGVQVTYTRLRRLFAWPGLKKSVQLFVDSCSMCKQAKAERVRYPGLLQPLPVPE 754

Query: 550  QA 555
             A
Sbjct: 755  HA 756



 Score = 50.1 bits (118), Expect(2) = 2e-43
 Identities = 22/35 (62%), Positives = 29/35 (82%)
 Frame = +2

Query: 563 IISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLAL 667
           ++S+DFIEGLP S G   ILVVVD+F++Y HF+AL
Sbjct: 759 VVSLDFIEGLPLSLGFNCILVVVDKFSRYAHFIAL 793


>gb|AAP54937.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1477

 Score =  150 bits (378), Expect(2) = 5e-43
 Identities = 77/184 (41%), Positives = 113/184 (61%), Gaps = 1/184 (0%)
 Frame = +1

Query: 7    LLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQT-CAALAIVIPSW 183
            L DQ++ TP QQK  TKLLGL   I YRKG+ N AADALSR+ +       A++   PSW
Sbjct: 965  LSDQRLHTPWQQKAFTKLLGLQYRIVYRKGSANSAADALSRKDLGDSAQILAVSSCSPSW 1024

Query: 184  VQKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQLRELILHEM 363
            +Q+V+Q Y  D    +++A  +L+P     + L  G +RYKGR+ VG++T L+  ++ E+
Sbjct: 1025 LQEVIQGYEQDKFSSQLLAELSLNPKAREHYTLQQGLIRYKGRIWVGNNTDLQLKLIKEL 1084

Query: 364  HGSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVRSKNKPDHGPYPGLLQPLPI 543
            H +   GHS    TY R+K +  W  MK+ + + +K C++  + KP+   YPGLLQPLP+
Sbjct: 1085 HDNPAGGHSGFPVTYRRIKHLFAWLGMKQQIQQQLKQCQICQQAKPERVKYPGLLQPLPV 1144

Query: 544  PSQA 555
            P  A
Sbjct: 1145 PKGA 1148



 Score = 51.2 bits (121), Expect(2) = 5e-43
 Identities = 24/35 (68%), Positives = 28/35 (80%)
 Frame = +2

Query: 563  IISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLAL 667
            +ISMDFIEGLP+S     ILVVVD+F+KY HFL L
Sbjct: 1151 VISMDFIEGLPTSDKYNCILVVVDKFSKYAHFLPL 1185


>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
          Length = 1586

 Score =  144 bits (363), Expect(2) = 7e-43
 Identities = 73/197 (37%), Positives = 113/197 (57%), Gaps = 4/197 (2%)
 Frame = +1

Query: 1    K*LLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQTCAALAIVIPS 180
            K +++Q+++  IQ K + KL+  D  I+Y+ G +N  ADALSR   P + C A+  VIP 
Sbjct: 1054 KFMMNQRLVEGIQHKLLLKLMEYDYSIEYKAGKENLVADALSRIP-PAEQCQAITTVIPE 1112

Query: 181  WVQKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQLRELILHE 360
            WV+ + +SY  D    KI++    + +T   +    G LRYKGR+ VG +T++RE ++  
Sbjct: 1113 WVRDIQRSYEGDVQAHKILSLIGTEGDTDGSYSQEAGLLRYKGRIYVGENTEIREELIRS 1172

Query: 361  MHGSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVRSKNKPDHGPYPGLLQPLP 540
             H S + GHS +  TY R+K + YWP +KK V  +++ C +    K +H   PGLL PL 
Sbjct: 1173 YHSSAFGGHSGMRATYHRIKSLFYWPGLKKAVEGFIRECPICQVTKAEHIHIPGLLDPLE 1232

Query: 541  IPSQA*TH----YIHGL 579
            +P  A  H    ++ GL
Sbjct: 1233 VPDMAWAHITMDFVEGL 1249



 Score = 56.6 bits (135), Expect(2) = 7e-43
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = +2

Query: 566  ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLAL 667
            I+MDF+EGLP S GK VILVVVDR TKY HF+A+
Sbjct: 1241 ITMDFVEGLPKSNGKDVILVVVDRLTKYAHFIAM 1274


>gb|ABA95357.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2811

 Score =  149 bits (376), Expect(2) = 7e-42
 Identities = 74/184 (40%), Positives = 121/184 (65%), Gaps = 1/184 (0%)
 Frame = +1

Query: 7    LLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSR-QGVPIQTCAALAIVIPSW 183
            L +Q++ TP QQK +TKLLGL  +I Y+KG +N AADALSR Q   ++  +A++I +P W
Sbjct: 2230 LTNQRLSTPWQQKALTKLLGLRYKICYKKGLENGAADALSRRQSDGLEEVSAISICLPDW 2289

Query: 184  VQKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQLRELILHEM 363
            +Q+++  Y +D   QK++   ++     ++F + +G L +K R+ +G +  L++ IL  +
Sbjct: 2290 LQELIDGYQSDSEAQKLLQALSVSGAGPSNFEVQNGILYFKHRIWIGHNKLLQQKILANL 2349

Query: 364  HGSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVRSKNKPDHGPYPGLLQPLPI 543
            H +   GHS +  TY R+K++  WP M+KDV E+V+ C++  + K +H  YPGLLQPL +
Sbjct: 2350 HTAAVGGHSGILVTYQRVKQLFSWPGMRKDVQEFVQHCDICQRAKSEHVKYPGLLQPLEV 2409

Query: 544  PSQA 555
            PSQ+
Sbjct: 2410 PSQS 2413



 Score = 48.1 bits (113), Expect(2) = 7e-42
 Identities = 21/35 (60%), Positives = 27/35 (77%)
 Frame = +2

Query: 563  IISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLAL 667
            +I+MDFIEGLP S     ILV+VD+F+K+ HFL L
Sbjct: 2416 VITMDFIEGLPKSASFDCILVIVDKFSKFAHFLPL 2450


>gb|AAM51835.1|AC105730_9 Putative plant disease resistance polyprotein [Oryza sativa
           Japonica Group] gi|108706266|gb|ABF94061.1|
           retrotransposon protein, putative, unclassified,
           expressed [Oryza sativa Japonica Group]
          Length = 1159

 Score =  146 bits (368), Expect(2) = 7e-42
 Identities = 74/181 (40%), Positives = 108/181 (59%)
 Frame = +1

Query: 13  DQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQTCAALAIVIPSWVQK 192
           DQ + T +QQK +TKL+GL    QY++G  N  ADALSR     Q CA L++V P W+Q+
Sbjct: 170 DQILGTELQQKAMTKLMGLQYSFQYKRGVDNIVADALSRMPSSSQFCA-LSVVQPIWIQE 228

Query: 193 VVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQLRELILHEMHGS 372
           V+ SYT DP  Q+++A   +       + LT G +R++ ++ +GS+  L   ++   H S
Sbjct: 229 VINSYTVDPQAQQLLAELAVHSPNSQGYSLTQGIIRFQNKIWIGSNAGLHTKLIQAFHAS 288

Query: 373 TYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVRSKNKPDHGPYPGLLQPLPIPSQ 552
              GHS +  TY R K++  WP +K DV  +VK C+V  + K +H   PGLL PLPIP +
Sbjct: 289 ALGGHSGIAATYHRFKKLFAWPGLKLDVENFVKQCQVCQQAKHEHCRLPGLLAPLPIPKE 348

Query: 553 A 555
           A
Sbjct: 349 A 349



 Score = 51.2 bits (121), Expect(2) = 7e-42
 Identities = 25/34 (73%), Positives = 26/34 (76%)
 Frame = +2

Query: 566 ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLAL 667
           ISMDFIEGLP S G   ILVVVDRFTKY  F+ L
Sbjct: 353 ISMDFIEGLPRSDGYNAILVVVDRFTKYADFIPL 386