BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00014418
         (457 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006354698.1| PREDICTED: pentatricopeptide repeat-containi...   261   7e-68
ref|XP_004237613.1| PREDICTED: pentatricopeptide repeat-containi...   260   2e-67
ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containi...   258   6e-67
ref|XP_004504032.1| PREDICTED: pentatricopeptide repeat-containi...   257   1e-66
ref|XP_002532046.1| pentatricopeptide repeat-containing protein,...   256   2e-66
gb|EXB80843.1| hypothetical protein L484_020101 [Morus notabilis]     254   8e-66
gb|EOX92242.1| Tetratricopeptide repeat (TPR)-like superfamily p...   254   8e-66
gb|EPS58459.1| hypothetical protein M569_16353, partial [Genlise...   252   4e-65
ref|XP_003524280.1| PREDICTED: pentatricopeptide repeat-containi...   251   7e-65
ref|XP_006428072.1| hypothetical protein CICLE_v10025440mg [Citr...   249   2e-64
ref|XP_006411755.1| hypothetical protein EUTSA_v10024997mg [Eutr...   247   1e-63
ref|XP_006585305.1| PREDICTED: pentatricopeptide repeat-containi...   246   2e-63
ref|XP_002306340.2| pentatricopeptide repeat-containing family p...   246   3e-63
gb|EMJ13220.1| hypothetical protein PRUPE_ppa004899mg [Prunus pe...   246   3e-63
ref|XP_004169853.1| PREDICTED: pentatricopeptide repeat-containi...   246   3e-63
ref|XP_004143565.1| PREDICTED: pentatricopeptide repeat-containi...   246   3e-63
ref|XP_004296690.1| PREDICTED: pentatricopeptide repeat-containi...   245   4e-63
ref|XP_003630096.1| Pentatricopeptide repeat-containing protein ...   245   5e-63
ref|XP_002866871.1| EMB2453 [Arabidopsis lyrata subsp. lyrata] g...   243   2e-62
ref|NP_001190970.1| pentatricopeptide repeat-containing protein ...   242   3e-62

>ref|XP_006354698.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like isoform X1 [Solanum tuberosum]
           gi|565376411|ref|XP_006354699.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like isoform X2 [Solanum tuberosum]
           gi|565376413|ref|XP_006354700.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like isoform X3 [Solanum tuberosum]
          Length = 457

 Score =  261 bits (667), Expect = 7e-68
 Identities = 124/152 (81%), Positives = 144/152 (94%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           C PSIVTYNILLRAFAQAKNV+QV+AL KDLDESIVTPDI+TFNG+MDAYGK GMI EME
Sbjct: 174 CSPSIVTYNILLRAFAQAKNVEQVDALLKDLDESIVTPDIFTFNGLMDAYGKNGMINEME 233

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
            +LSRMKSNQ+KPDIITFN+LID+YG+KQ+F KMEQVFKSLL+SKEKPT+PTFNSMITNY
Sbjct: 234 HILSRMKSNQLKPDIITFNILIDSYGKKQDFQKMEQVFKSLLQSKEKPTIPTFNSMITNY 293

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECLI 456
           GKAR REK++LV++K+ D+GYKPS++TYECLI
Sbjct: 294 GKARLREKSELVLEKMIDLGYKPSYITYECLI 325



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 43/135 (31%), Positives = 71/135 (52%)
 Frame = +1

Query: 4   KPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREMEL 183
           KP I+T+NIL+ ++ + ++  ++  +FK L +S   P I TFN ++  YGK  +  + EL
Sbjct: 245 KPDIITFNILIDSYGKKQDFQKMEQVFKSLLQSKEKPTIPTFNSMITNYGKARLREKSEL 304

Query: 184 VLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNYG 363
           VL +M     KP  IT+  LI  YG      K  ++F  ++ S+ +    T NSM+  Y 
Sbjct: 305 VLEKMIDLGYKPSYITYECLIVMYGHCDCVAKARELFDRVIESETEKKASTLNSMLDAYC 364

Query: 364 KARQREKADLVIQKI 408
                 +A L+ + I
Sbjct: 365 MNGLPMEAHLLFESI 379


>ref|XP_004237613.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Solanum lycopersicum]
          Length = 478

 Score =  260 bits (664), Expect = 2e-67
 Identities = 124/152 (81%), Positives = 144/152 (94%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           C PSIVTYNILLRAFAQAKNV+QV+AL KDLDESIVTPDI+TFNG+MDAYGK GMI EME
Sbjct: 195 CSPSIVTYNILLRAFAQAKNVEQVDALLKDLDESIVTPDIFTFNGLMDAYGKNGMINEME 254

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
            VLSRMKSN++KPDIITFN+LID+YG+KQ+F KMEQVFKSLL+SKEKPT+PTFNSMITNY
Sbjct: 255 HVLSRMKSNKLKPDIITFNILIDSYGKKQDFQKMEQVFKSLLQSKEKPTIPTFNSMITNY 314

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECLI 456
           GKAR REK++LV++K+ D+GYKPS++TYECLI
Sbjct: 315 GKARLREKSELVLEKMIDLGYKPSYITYECLI 346



 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 43/135 (31%), Positives = 72/135 (53%)
 Frame = +1

Query: 4   KPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREMEL 183
           KP I+T+NIL+ ++ + ++  ++  +FK L +S   P I TFN ++  YGK  +  + EL
Sbjct: 266 KPDIITFNILIDSYGKKQDFQKMEQVFKSLLQSKEKPTIPTFNSMITNYGKARLREKSEL 325

Query: 184 VLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNYG 363
           VL +M     KP  IT+  LI  YG      K  ++F  ++ S+++    T NSM+  Y 
Sbjct: 326 VLEKMIDLGYKPSYITYECLIVMYGHCDCVSKARELFDRVMESEKEKKASTLNSMLDAYC 385

Query: 364 KARQREKADLVIQKI 408
                 +A L+ + I
Sbjct: 386 MNGLPMEAHLLFESI 400


>ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Vitis vinifera]
           gi|296082481|emb|CBI21486.3| unnamed protein product
           [Vitis vinifera]
          Length = 489

 Score =  258 bits (659), Expect = 6e-67
 Identities = 126/152 (82%), Positives = 143/152 (94%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           CKP+IVTYNILLRAFAQA+NV+Q NALFK+L+ESIV+PDI+TFNGVMDAYGK GMI+EME
Sbjct: 205 CKPNIVTYNILLRAFAQAQNVNQANALFKELNESIVSPDIFTFNGVMDAYGKNGMIKEME 264

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
            VLSRMKSNQ KPDIITFN+LID+YGR+QEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY
Sbjct: 265 SVLSRMKSNQCKPDIITFNVLIDSYGRRQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 324

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECLI 456
           GKAR +EKA+ V +K+TDMGY P+F+TYE LI
Sbjct: 325 GKARLKEKAENVFKKMTDMGYAPNFITYESLI 356



 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 43/151 (28%), Positives = 78/151 (51%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           CKP I+T+N+L+ ++ + +  D++  +FK L  S   P + TFN ++  YGK  +  + E
Sbjct: 275 CKPDIITFNVLIDSYGRRQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLKEKAE 334

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
            V  +M      P+ IT+  LI  YG      +  ++F  ++ SK++  + T N+M+  Y
Sbjct: 335 NVFKKMTDMGYAPNFITYESLIMMYGFCDCISRAREIFDEMMASKKEMKVSTLNAMLEVY 394

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECL 453
                  +ADL++++       P   TY+ L
Sbjct: 395 CMNGLPMEADLLLERARKNRPFPGSSTYKLL 425


>ref|XP_004504032.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like isoform X1 [Cicer arietinum]
           gi|502140047|ref|XP_004504033.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like isoform X2 [Cicer arietinum]
          Length = 477

 Score =  257 bits (657), Expect = 1e-66
 Identities = 123/152 (80%), Positives = 143/152 (94%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           CKP+IVTYNILLRAFAQ++NVDQVN+LFKDLD+S+V+PDIYTFNGVMDAYGK GMIREME
Sbjct: 189 CKPNIVTYNILLRAFAQSRNVDQVNSLFKDLDDSVVSPDIYTFNGVMDAYGKNGMIREME 248

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
            VL+RMKSNQ+KPD+IT+NLLID+YG+KQ+FDKMEQVFKSLLRSKEKP+LPTFNSMI NY
Sbjct: 249 TVLARMKSNQVKPDLITYNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMILNY 308

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECLI 456
           GKAR ++KA+ V Q +TDMGY PSFVT+E LI
Sbjct: 309 GKARLKDKAENVFQNMTDMGYTPSFVTHESLI 340



 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 42/150 (28%), Positives = 71/150 (47%)
 Frame = +1

Query: 4   KPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREMEL 183
           KP ++TYN+L+ ++ + +  D++  +FK L  S   P + TFN ++  YGK  +  + E 
Sbjct: 260 KPDLITYNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMILNYGKARLKDKAEN 319

Query: 184 VLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNYG 363
           V   M      P  +T   LI  YG      K  ++F  L+ SK    + T N+M+  Y 
Sbjct: 320 VFQNMTDMGYTPSFVTHESLIYMYGFCDCVSKAVELFDGLIESKVPMKVSTLNAMLDVYC 379

Query: 364 KARQREKADLVIQKITDMGYKPSFVTYECL 453
                ++AD +  +   +   P   TY+ L
Sbjct: 380 INGLPQEADSLFARARRVNIFPDASTYKLL 409


>ref|XP_002532046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528289|gb|EEF30336.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 478

 Score =  256 bits (655), Expect = 2e-66
 Identities = 124/152 (81%), Positives = 142/152 (93%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           C+P++VTYNILLRAFAQA+NV+QVNALFKDLD+SIV+PDIYT+NGVMDAYGK GMIREME
Sbjct: 203 CQPNVVTYNILLRAFAQARNVNQVNALFKDLDQSIVSPDIYTYNGVMDAYGKNGMIREME 262

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
            VLSRMKSNQ KPDIITFNLLID+YG+KQ+FDKMEQVFKSLL SKE+PTLPTFNSMITNY
Sbjct: 263 SVLSRMKSNQCKPDIITFNLLIDSYGKKQDFDKMEQVFKSLLHSKERPTLPTFNSMITNY 322

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECLI 456
           GKARQ+E A+ V+QK+T M Y P+F+TYE LI
Sbjct: 323 GKARQKENAESVLQKMTKMKYTPNFITYESLI 354



 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 45/151 (29%), Positives = 78/151 (51%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           CKP I+T+N+L+ ++ + ++ D++  +FK L  S   P + TFN ++  YGK       E
Sbjct: 273 CKPDIITFNLLIDSYGKKQDFDKMEQVFKSLLHSKERPTLPTFNSMITNYGKARQKENAE 332

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
            VL +M   +  P+ IT+  LI  YG      K  ++F  ++ S ++  + T N+M+  Y
Sbjct: 333 SVLQKMTKMKYTPNFITYESLIMMYGFCDSVSKAREIFDDMIESGKEVKVSTLNAMLDVY 392

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECL 453
                  +ADL+     ++G  P   TY+ L
Sbjct: 393 CLNGLPMEADLLFDNARNVGLLPDSTTYKLL 423


>gb|EXB80843.1| hypothetical protein L484_020101 [Morus notabilis]
          Length = 485

 Score =  254 bits (649), Expect = 8e-66
 Identities = 125/152 (82%), Positives = 140/152 (92%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           CKP+IVTYNILLRAFAQA+NV +VN+LFKDLD SIV+PDIYT+NGVMDAYGK GMIREME
Sbjct: 201 CKPNIVTYNILLRAFAQARNVQRVNSLFKDLDGSIVSPDIYTYNGVMDAYGKNGMIREME 260

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
            VLS MKSN IKPDIITFNLLID+YG+KQEFDKMEQVFKSLLRSKE+PTLPTFNSMI NY
Sbjct: 261 SVLSLMKSNHIKPDIITFNLLIDSYGKKQEFDKMEQVFKSLLRSKERPTLPTFNSMIINY 320

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECLI 456
           GKAR+ +KA+ V +K+TDMGY PSF+TYE LI
Sbjct: 321 GKARRLDKAENVFEKMTDMGYTPSFITYESLI 352



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 41/150 (27%), Positives = 74/150 (49%)
 Frame = +1

Query: 4   KPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREMEL 183
           KP I+T+N+L+ ++ + +  D++  +FK L  S   P + TFN ++  YGK   + + E 
Sbjct: 272 KPDIITFNLLIDSYGKKQEFDKMEQVFKSLLRSKERPTLPTFNSMIINYGKARRLDKAEN 331

Query: 184 VLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNYG 363
           V  +M      P  IT+  LI  YG      + + +F  L+ S +   + T N+M+  Y 
Sbjct: 332 VFEKMTDMGYTPSFITYESLIMMYGYCDCVSRAQDIFNRLVESGKDIKVSTLNAMLDVYC 391

Query: 364 KARQREKADLVIQKITDMGYKPSFVTYECL 453
                 +A  + +   ++G  P+  TY+ L
Sbjct: 392 MNGLPMEAHKLFEDSKNIGVVPNSSTYKLL 421


>gb|EOX92242.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
           [Theobroma cacao] gi|508700347|gb|EOX92243.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao]
          Length = 488

 Score =  254 bits (649), Expect = 8e-66
 Identities = 125/152 (82%), Positives = 139/152 (91%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           CKP+IVTYNILLRAF+QA+NVDQVNALFKDL ESI+ PDIYT+NGVMDAYGK GMIREME
Sbjct: 199 CKPNIVTYNILLRAFSQARNVDQVNALFKDLAESIIAPDIYTYNGVMDAYGKNGMIREME 258

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
            VLSRMKSNQ KPD ITFN+LID+YG+KQEFDKMEQVFKSLLRSK+KPTLPTFNSMI NY
Sbjct: 259 SVLSRMKSNQCKPDTITFNVLIDSYGKKQEFDKMEQVFKSLLRSKQKPTLPTFNSMIINY 318

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECLI 456
           GKAR +EKA+ V +K+TDM Y PSF+TYE LI
Sbjct: 319 GKARLKEKAEHVFKKMTDMKYVPSFITYESLI 350



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 41/151 (27%), Positives = 75/151 (49%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           CKP  +T+N+L+ ++ + +  D++  +FK L  S   P + TFN ++  YGK  +  + E
Sbjct: 269 CKPDTITFNVLIDSYGKKQEFDKMEQVFKSLLRSKQKPTLPTFNSMIINYGKARLKEKAE 328

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
            V  +M   +  P  IT+  LI  YG      +  ++F  ++ S ++  + T N+M+  Y
Sbjct: 329 HVFKKMTDMKYVPSFITYESLIMMYGFCDCVSRAREIFDGIVNSGKEMRVSTLNAMLEVY 388

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECL 453
            +     +AD + +    MG      TY+ L
Sbjct: 389 CRNGLHMEADRLFENAHKMGVIRDSSTYKLL 419


>gb|EPS58459.1| hypothetical protein M569_16353, partial [Genlisea aurea]
          Length = 415

 Score =  252 bits (643), Expect = 4e-65
 Identities = 121/152 (79%), Positives = 140/152 (92%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           C+P++VTYNILLRAFAQAKN++QVNALFK+LD SI++PD+ T+NGVMDAYGK GMIREME
Sbjct: 146 CQPNVVTYNILLRAFAQAKNIEQVNALFKELDGSIISPDVLTYNGVMDAYGKNGMIREME 205

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
           LVLS+MKS QIKPD+ITFNLLIDAYGR+QEFDKMEQVFKSL+ SKEKPT+PTFNSMITNY
Sbjct: 206 LVLSKMKSAQIKPDVITFNLLIDAYGRRQEFDKMEQVFKSLMHSKEKPTVPTFNSMITNY 265

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECLI 456
           GKAR R+KAD   QK+  MGYKPS+VT+E LI
Sbjct: 266 GKARLRDKADATYQKMIGMGYKPSYVTHESLI 297



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 31/119 (26%), Positives = 59/119 (49%)
 Frame = +1

Query: 4   KPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREMEL 183
           KP ++T+N+L+ A+ + +  D++  +FK L  S   P + TFN ++  YGK  +  + + 
Sbjct: 217 KPDVITFNLLIDAYGRRQEFDKMEQVFKSLMHSKEKPTVPTFNSMITNYGKARLRDKADA 276

Query: 184 VLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
              +M     KP  +T   LI A+G      +  ++F  ++ +       T N+M+  Y
Sbjct: 277 TYQKMIGMGYKPSYVTHESLIVAFGHCDYVSRAREIFDQVIGTDTVKRTSTLNAMLEVY 335


>ref|XP_003524280.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Glycine max]
          Length = 503

 Score =  251 bits (641), Expect = 7e-65
 Identities = 123/152 (80%), Positives = 141/152 (92%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           CKP+IVTYNILLRAFAQA+NV+QVN+LFKDLDESIV+PDIYTFNGVMDAYGK GMIREME
Sbjct: 180 CKPNIVTYNILLRAFAQARNVEQVNSLFKDLDESIVSPDIYTFNGVMDAYGKNGMIREME 239

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
            VL+RMKSNQ KPD+ITFNLLID+YG+KQEF KMEQVFKSLLRSKE+ +LPTFNSMI NY
Sbjct: 240 AVLARMKSNQCKPDLITFNLLIDSYGKKQEFGKMEQVFKSLLRSKERASLPTFNSMILNY 299

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECLI 456
           GKAR ++KA+ V +++TDMGY PSFVT+E LI
Sbjct: 300 GKARLKDKAEDVFKRMTDMGYTPSFVTHESLI 331



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/151 (26%), Positives = 72/151 (47%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           CKP ++T+N+L+ ++ + +   ++  +FK L  S     + TFN ++  YGK  +  + E
Sbjct: 250 CKPDLITFNLLIDSYGKKQEFGKMEQVFKSLLRSKERASLPTFNSMILNYGKARLKDKAE 309

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
            V  RM      P  +T   LI  YG      +  Q+F  L+ SK    + T N+M+  Y
Sbjct: 310 DVFKRMTDMGYTPSFVTHESLIYMYGFCDCVSRAAQLFDELVESKAHIKVSTLNAMLDVY 369

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECL 453
                 ++AD + ++   +   P   T++ L
Sbjct: 370 CINGLPQEADSLFERANSIKIYPDSSTFKLL 400


>ref|XP_006428072.1| hypothetical protein CICLE_v10025440mg [Citrus clementina]
           gi|568819570|ref|XP_006464322.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Citrus sinensis]
           gi|557530062|gb|ESR41312.1| hypothetical protein
           CICLE_v10025440mg [Citrus clementina]
          Length = 500

 Score =  249 bits (637), Expect = 2e-64
 Identities = 122/152 (80%), Positives = 137/152 (90%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           CKP+IVTYNILLRA AQA+NVDQVNALFK+LDESI+ PDIYT+NGVMDAYGK GMI+EME
Sbjct: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELDESILAPDIYTYNGVMDAYGKNGMIKEME 275

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
            VLSRMKSNQ KPDIITFNLLID+YG++Q FDKMEQVFKSL+ SKEKPTLPTFNSMI NY
Sbjct: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECLI 456
           GKAR + KA+ V QK+T M Y PSF+TYEC+I
Sbjct: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECII 367



 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 43/151 (28%), Positives = 77/151 (50%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           CKP I+T+N+L+ ++ + +  D++  +FK L  S   P + TFN ++  YGK  +  + E
Sbjct: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
            V  +M + +  P  IT+  +I  YG      +  ++F  L +  +   + T N+M+  Y
Sbjct: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECL 453
                  +ADL+ +   +MG  P   TY+ L
Sbjct: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436


>ref|XP_006411755.1| hypothetical protein EUTSA_v10024997mg [Eutrema salsugineum]
           gi|557112925|gb|ESQ53208.1| hypothetical protein
           EUTSA_v10024997mg [Eutrema salsugineum]
          Length = 496

 Score =  247 bits (631), Expect = 1e-63
 Identities = 117/152 (76%), Positives = 138/152 (90%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           C+P++VTYNILLRAFAQ+  VDQVNALFK+LD S V+PD+YTFNGVMDAYGK GMI+EME
Sbjct: 206 CQPNVVTYNILLRAFAQSGKVDQVNALFKELDISAVSPDVYTFNGVMDAYGKNGMIKEME 265

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
            VL+RM+SN+ KPDIITFNLLID+YG+KQEF+KMEQ FKSLLRSKEKPTLPTFNSMI NY
Sbjct: 266 SVLTRMRSNECKPDIITFNLLIDSYGKKQEFEKMEQTFKSLLRSKEKPTLPTFNSMIINY 325

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECLI 456
           GKAR+R+KA+ V +K+ DM Y PSF+TYEC+I
Sbjct: 326 GKARRRDKAEWVFEKMNDMNYMPSFITYECMI 357



 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 39/151 (25%), Positives = 70/151 (46%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           CKP I+T+N+L+ ++ + +  +++   FK L  S   P + TFN ++  YGK     + E
Sbjct: 276 CKPDIITFNLLIDSYGKKQEFEKMEQTFKSLLRSKEKPTLPTFNSMIINYGKARRRDKAE 335

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
            V  +M      P  IT+  +I  YG      +  ++F+ ++ S+      T N+M+  Y
Sbjct: 336 WVFEKMNDMNYMPSFITYECMIMMYGYCGSVSRAREMFEEVVESERVLKPSTLNAMLDVY 395

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECL 453
                  +AD +    +     P   TY+ L
Sbjct: 396 CLNGLHMEADKLFHSASAFRVHPDASTYKLL 426


>ref|XP_006585305.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Glycine max]
          Length = 526

 Score =  246 bits (629), Expect = 2e-63
 Identities = 121/152 (79%), Positives = 139/152 (91%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           CKP+IVTYNILLRAFAQA+NV+QVN+LFKDLDESIV+PDIYTFNGVMDAYGK GMIREME
Sbjct: 189 CKPNIVTYNILLRAFAQARNVEQVNSLFKDLDESIVSPDIYTFNGVMDAYGKNGMIREME 248

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
            VL+RMKSNQ KPD+ITFNLLID+YG+KQ F KMEQVFKSLL SKE+P+LPTFNSMI NY
Sbjct: 249 AVLARMKSNQCKPDLITFNLLIDSYGKKQAFGKMEQVFKSLLHSKERPSLPTFNSMILNY 308

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECLI 456
           GKAR ++KA+ V +K+TDMGY  SFVT+E +I
Sbjct: 309 GKARLKDKAEDVFKKMTDMGYTLSFVTHESMI 340



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 38/151 (25%), Positives = 72/151 (47%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           CKP ++T+N+L+ ++ + +   ++  +FK L  S   P + TFN ++  YGK  +  + E
Sbjct: 259 CKPDLITFNLLIDSYGKKQAFGKMEQVFKSLLHSKERPSLPTFNSMILNYGKARLKDKAE 318

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
            V  +M         +T   +I  YG      +  Q+F  L+ SK    + T N+M+  Y
Sbjct: 319 DVFKKMTDMGYTLSFVTHESMIYMYGFCDCVSRAAQLFDELVESKVHIKVSTLNAMLDVY 378

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECL 453
                 ++AD + ++   +   P   T++ L
Sbjct: 379 CLNGLPQEADSLFERAISIKIHPDSSTFKLL 409


>ref|XP_002306340.2| pentatricopeptide repeat-containing family protein, partial
           [Populus trichocarpa] gi|550338395|gb|EEE93336.2|
           pentatricopeptide repeat-containing family protein,
           partial [Populus trichocarpa]
          Length = 414

 Score =  246 bits (627), Expect = 3e-63
 Identities = 118/152 (77%), Positives = 140/152 (92%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           C+P++VTYNI+LRAFAQA+NV+QVNALFKDL+ESIV+PDIYT+NGV+DAYGK GMIREME
Sbjct: 165 CQPNVVTYNIILRAFAQARNVNQVNALFKDLEESIVSPDIYTYNGVLDAYGKNGMIREME 224

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
            VLSRMK +Q KPDIITFNLLID+YG+KQ+F+KMEQVFKSLLRSKEKPTLPTFNSMI NY
Sbjct: 225 SVLSRMKIDQCKPDIITFNLLIDSYGKKQDFEKMEQVFKSLLRSKEKPTLPTFNSMIVNY 284

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECLI 456
           GKAR ++KA+ V +K+ DM Y PSF+T+E LI
Sbjct: 285 GKARLKDKAESVFKKMADMRYTPSFITFESLI 316



 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 41/151 (27%), Positives = 78/151 (51%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           CKP I+T+N+L+ ++ + ++ +++  +FK L  S   P + TFN ++  YGK  +  + E
Sbjct: 235 CKPDIITFNLLIDSYGKKQDFEKMEQVFKSLLRSKEKPTLPTFNSMIVNYGKARLKDKAE 294

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
            V  +M   +  P  ITF  LI  YG      K   +F  ++ S ++  + T N+++  Y
Sbjct: 295 SVFKKMADMRYTPSFITFESLIMMYGICDCVSKARDIFDDMVESGKEVKVSTLNAVLNVY 354

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECL 453
                  +A ++++    +G  P+  TY+ L
Sbjct: 355 CMNGLHMEAHILLENARSIGVPPNSSTYKLL 385


>gb|EMJ13220.1| hypothetical protein PRUPE_ppa004899mg [Prunus persica]
          Length = 486

 Score =  246 bits (627), Expect = 3e-63
 Identities = 120/152 (78%), Positives = 138/152 (90%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           C+P+IVTYNILLRAFAQ++NV++VN+LFKDLDESI +PDIYT+NGVMDAYGK G IREME
Sbjct: 202 CQPNIVTYNILLRAFAQSRNVEKVNSLFKDLDESIASPDIYTYNGVMDAYGKNGNIREME 261

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
            VLS MKSNQ KPDIITFNLLID+YG+KQ+FDKMEQVFKSL+RSKEKPTLPTFNSMI NY
Sbjct: 262 SVLSHMKSNQCKPDIITFNLLIDSYGKKQQFDKMEQVFKSLVRSKEKPTLPTFNSMIINY 321

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECLI 456
           GKAR +EKA+ V +K+ DM Y PSF+TYE LI
Sbjct: 322 GKARLKEKAEDVFKKMIDMKYTPSFITYESLI 353



 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 45/151 (29%), Positives = 76/151 (50%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           CKP I+T+N+L+ ++ + +  D++  +FK L  S   P + TFN ++  YGK  +  + E
Sbjct: 272 CKPDIITFNLLIDSYGKKQQFDKMEQVFKSLVRSKEKPTLPTFNSMIINYGKARLKEKAE 331

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
            V  +M   +  P  IT+  LI  YG      K  +VF  L  S ++  + T N+M+  Y
Sbjct: 332 DVFKKMIDMKYTPSFITYESLIMMYGFCDSVSKAREVFDRLADSGKELKVSTLNAMLDVY 391

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECL 453
                  +AD +      +G +P+  TY+ L
Sbjct: 392 CMNGLPVEADKLFVNGNSIGVRPNVSTYKLL 422


>ref|XP_004169853.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Cucumis sativus]
          Length = 494

 Score =  246 bits (627), Expect = 3e-63
 Identities = 122/152 (80%), Positives = 137/152 (90%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           CKP+IVTYNIL RAFAQA  VDQVN LFKDLDES+V+ DIYT+NGVMDAYGK G I+EME
Sbjct: 198 CKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEME 257

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
           L+L+RMKSNQIKPDII+FNLLID+YG+KQ FDKMEQVFKSLLRSKE+PTLPTFNSMITNY
Sbjct: 258 LMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNY 317

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECLI 456
           GKAR REKA+ V +K+ DMGY PS+VT E LI
Sbjct: 318 GKARLREKAEEVFRKMKDMGYDPSYVTCESLI 349



 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 42/150 (28%), Positives = 75/150 (50%)
 Frame = +1

Query: 4   KPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREMEL 183
           KP I+++N+L+ ++ + +  D++  +FK L  S   P + TFN ++  YGK  +  + E 
Sbjct: 269 KPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEE 328

Query: 184 VLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNYG 363
           V  +MK     P  +T   LI  YG      K  ++F  ++ S ++  + T N+M+  Y 
Sbjct: 329 VFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYC 388

Query: 364 KARQREKADLVIQKITDMGYKPSFVTYECL 453
                 +ADL+ +   +M   P   TY+ L
Sbjct: 389 INGLPLEADLLFESAGNMRVFPDSTTYKLL 418


>ref|XP_004143565.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Cucumis sativus]
          Length = 528

 Score =  246 bits (627), Expect = 3e-63
 Identities = 122/152 (80%), Positives = 137/152 (90%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           CKP+IVTYNIL RAFAQA  VDQVN LFKDLDES+V+ DIYT+NGVMDAYGK G I+EME
Sbjct: 198 CKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEME 257

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
           L+L+RMKSNQIKPDII+FNLLID+YG+KQ FDKMEQVFKSLLRSKE+PTLPTFNSMITNY
Sbjct: 258 LMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNY 317

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECLI 456
           GKAR REKA+ V +K+ DMGY PS+VT E LI
Sbjct: 318 GKARLREKAEEVFRKMKDMGYDPSYVTCESLI 349



 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 42/150 (28%), Positives = 75/150 (50%)
 Frame = +1

Query: 4   KPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREMEL 183
           KP I+++N+L+ ++ + +  D++  +FK L  S   P + TFN ++  YGK  +  + E 
Sbjct: 269 KPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEE 328

Query: 184 VLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNYG 363
           V  +MK     P  +T   LI  YG      K  ++F  ++ S ++  + T N+M+  Y 
Sbjct: 329 VFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYC 388

Query: 364 KARQREKADLVIQKITDMGYKPSFVTYECL 453
                 +ADL+ +   +M   P   TY+ L
Sbjct: 389 INGLPLEADLLFESAGNMRVFPDSTTYKLL 418


>ref|XP_004296690.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 420

 Score =  245 bits (626), Expect = 4e-63
 Identities = 118/152 (77%), Positives = 138/152 (90%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           C+P+IVTYNILLRA+AQA+NVD+VN+LFKDLDESI  PDIYT+NGVMDAYGK GMIR+ME
Sbjct: 135 CQPNIVTYNILLRAYAQARNVDKVNSLFKDLDESIACPDIYTYNGVMDAYGKNGMIRDME 194

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
            VLSRMKSNQ KPDIITFNLLID+YG+KQ+FDKMEQVFKSLL SKE+PTLPTFNSMI NY
Sbjct: 195 SVLSRMKSNQCKPDIITFNLLIDSYGKKQQFDKMEQVFKSLLHSKERPTLPTFNSMIINY 254

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECLI 456
           GKAR +E+A+ V +++ DM Y PSF+TYE L+
Sbjct: 255 GKARLKEQAESVFKRMIDMKYSPSFITYESLM 286



 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 43/151 (28%), Positives = 77/151 (50%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           CKP I+T+N+L+ ++ + +  D++  +FK L  S   P + TFN ++  YGK  +  + E
Sbjct: 205 CKPDIITFNLLIDSYGKKQQFDKMEQVFKSLLHSKERPTLPTFNSMIINYGKARLKEQAE 264

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
            V  RM   +  P  IT+  L+  YG      K  ++F  +  S ++  + T N M+  Y
Sbjct: 265 SVFKRMIDMKYSPSFITYESLMMMYGYCDSVSKAREIFDGVAESGQEMKVSTLNVMLDVY 324

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECL 453
            +     +AD ++     +G +P+  TY+ L
Sbjct: 325 CRNGLPMEADKLLLSANSIGIRPNVCTYKLL 355


>ref|XP_003630096.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355524118|gb|AET04572.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 635

 Score =  245 bits (625), Expect = 5e-63
 Identities = 121/152 (79%), Positives = 137/152 (90%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           CKP+IVTYNILLRAFAQA++V+QVN LFKDLDES V+PDIYTFNGVMD YGK GMIREME
Sbjct: 188 CKPNIVTYNILLRAFAQARDVNQVNYLFKDLDESSVSPDIYTFNGVMDGYGKNGMIREME 247

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
            VL RMKSNQ+K D+IT+NLLID+YG+KQ+FDKMEQVFKSL RSKEKPTLPTFNSMI NY
Sbjct: 248 SVLVRMKSNQVKLDLITYNLLIDSYGKKQQFDKMEQVFKSLSRSKEKPTLPTFNSMILNY 307

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECLI 456
           GKAR ++KA+ V Q +TDMGY PSFVT+E LI
Sbjct: 308 GKARLKDKAENVFQNMTDMGYTPSFVTHESLI 339



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 40/150 (26%), Positives = 70/150 (46%)
 Frame = +1

Query: 4   KPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREMEL 183
           K  ++TYN+L+ ++ + +  D++  +FK L  S   P + TFN ++  YGK  +  + E 
Sbjct: 259 KLDLITYNLLIDSYGKKQQFDKMEQVFKSLSRSKEKPTLPTFNSMILNYGKARLKDKAEN 318

Query: 184 VLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNYG 363
           V   M      P  +T   LI  YG         ++F  L+ SK    + T N+M+  Y 
Sbjct: 319 VFQNMTDMGYTPSFVTHESLIHMYGLCGCVSNAVELFDQLIESKVPIKVSTLNAMLDVYC 378

Query: 364 KARQREKADLVIQKITDMGYKPSFVTYECL 453
               +++AD +  +   +   P   TY+ L
Sbjct: 379 INGLQQEADSLFTRAKSIKIFPDATTYKLL 408



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 32/150 (21%), Positives = 71/150 (47%), Gaps = 5/150 (3%)
 Frame = +1

Query: 22  YNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAY-----GKIGMIREMELV 186
           Y+ L+    +   +     LF ++  +   PD   +N ++ A+         +++ +   
Sbjct: 120 YSKLISVMGKKGQIRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKSKALVKALGYF 179

Query: 187 LSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGK 366
                + + KP+I+T+N+L+ A+ + ++ +++  +FK L  S   P + TFN ++  YGK
Sbjct: 180 EKMKTTERCKPNIVTYNILLRAFAQARDVNQVNYLFKDLDESSVSPDIYTFNGVMDGYGK 239

Query: 367 ARQREKADLVIQKITDMGYKPSFVTYECLI 456
                + + V+ ++     K   +TY  LI
Sbjct: 240 NGMIREMESVLVRMKSNQVKLDLITYNLLI 269


>ref|XP_002866871.1| EMB2453 [Arabidopsis lyrata subsp. lyrata]
           gi|297312707|gb|EFH43130.1| EMB2453 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 561

 Score =  243 bits (620), Expect = 2e-62
 Identities = 115/152 (75%), Positives = 136/152 (89%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           C+P++VTYNILLRAFAQ+  VDQVNALFKDLD S V+PD+YTFNGVMDAYGK GMI+EME
Sbjct: 204 CQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEME 263

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
            VL+RM+SN+ KPDIITFN+LID+YG+KQEF+KMEQ FKSL+RSKEKPTLPTFNSMI NY
Sbjct: 264 AVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINY 323

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECLI 456
           GKAR  +KA+ V +K+ DM Y PSF+TYEC+I
Sbjct: 324 GKARMIDKAEWVFKKMNDMNYMPSFITYECMI 355



 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 41/151 (27%), Positives = 73/151 (48%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           CKP I+T+N+L+ ++ + +  +++   FK L  S   P + TFN ++  YGK  MI + E
Sbjct: 274 CKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAE 333

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
            V  +M      P  IT+  +I  YG      +  ++F+ ++ S+      T N+M+  Y
Sbjct: 334 WVFKKMNDMNYMPSFITYECMIMMYGYCGSVSRAREIFEEVVDSERVLKASTLNAMLEVY 393

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECL 453
            +     +AD +    +     P   TY+ L
Sbjct: 394 CRNGLYMEADKLFHNASAFRVHPDASTYKFL 424


>ref|NP_001190970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|332661695|gb|AEE87095.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 510

 Score =  242 bits (618), Expect = 3e-62
 Identities = 115/152 (75%), Positives = 136/152 (89%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           C+P++VTYNILLRAFAQ+  VDQVNALFKDLD S V+PD+YTFNGVMDAYGK GMI+EME
Sbjct: 204 CQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEME 263

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
            VL+RM+SN+ KPDIITFN+LID+YG+KQEF+KMEQ FKSL+RSKEKPTLPTFNSMI NY
Sbjct: 264 AVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINY 323

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECLI 456
           GKAR  +KA+ V +K+ DM Y PSF+TYEC+I
Sbjct: 324 GKARMIDKAEWVFKKMNDMNYIPSFITYECMI 355



 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 41/151 (27%), Positives = 71/151 (47%)
 Frame = +1

Query: 1   CKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREME 180
           CKP I+T+N+L+ ++ + +  +++   FK L  S   P + TFN ++  YGK  MI + E
Sbjct: 274 CKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAE 333

Query: 181 LVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY 360
            V  +M      P  IT+  +I  YG      +  ++F+ +  S       T N+M+  Y
Sbjct: 334 WVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVY 393

Query: 361 GKARQREKADLVIQKITDMGYKPSFVTYECL 453
            +     +AD +    +     P   TY+ L
Sbjct: 394 CRNGLYIEADKLFHNASAFRVHPDASTYKFL 424