BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00014303
         (663 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citr...   102   8e-20
ref|XP_006438858.1| hypothetical protein CICLE_v10030535mg [Citr...   102   8e-20
ref|XP_006438857.1| hypothetical protein CICLE_v10030535mg [Citr...   102   8e-20
ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal doma...    99   1e-18
emb|CBI35661.3| unnamed protein product [Vitis vinifera]               97   6e-18
gb|EXB81217.1| RNA polymerase II C-terminal domain phosphatase-l...    96   1e-17
ref|XP_006341905.1| PREDICTED: RNA polymerase II C-terminal doma...    91   4e-16
gb|EPS65946.1| hypothetical protein M569_08835, partial [Genlise...    89   9e-16
ref|XP_004252660.1| PREDICTED: RNA polymerase II C-terminal doma...    86   1e-14
gb|AAV92930.1| putative transcription regulator CPL1 [Solanum ly...    86   1e-14
ref|XP_004310239.1| PREDICTED: RNA polymerase II C-terminal doma...    83   7e-14
gb|EOX99661.1| RNA polymerase II C-terminal domain phosphatase-l...    82   1e-13
ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Popu...    79   9e-13
ref|XP_006296066.1| hypothetical protein CARUB_v10025216mg [Caps...    77   6e-12
ref|XP_002297869.2| CTD phosphatase-like protein 3 [Populus tric...    75   2e-11
ref|NP_180912.2| RNA polymerase II C-terminal domain phosphatase...    74   5e-11
gb|AAB80671.1| unknown protein [Arabidopsis thaliana]                  74   5e-11
gb|AAM94371.1|AF486633_1 CTD phosphatase-like 3 [Arabidopsis tha...    74   5e-11
ref|XP_002881287.1| hypothetical protein ARALYDRAFT_482300 [Arab...    72   2e-10
ref|XP_004157633.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...    71   3e-10

>ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
           gi|568858958|ref|XP_006483010.1| PREDICTED: RNA
           polymerase II C-terminal domain phosphatase-like 3-like
           [Citrus sinensis] gi|557541056|gb|ESR52100.1|
           hypothetical protein CICLE_v10030535mg [Citrus
           clementina]
          Length = 1234

 Score =  102 bits (255), Expect = 8e-20
 Identities = 65/182 (35%), Positives = 107/182 (58%), Gaps = 15/182 (8%)
 Frame = +1

Query: 94  DSNVEVKNEVG----GDVN-ELDERERSKRVNLIKEELESLNVADAQK----------SY 228
           DS  E++ E G    G++  +L+     K    +KEE++ +NV   ++          S+
Sbjct: 134 DSGDEIEKEEGELEEGEIELDLESESNEKVSEQVKEEMKLINVESIREALESVLRGDISF 193

Query: 229 DRLCSSLETTAVSLQKMVLEGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILL 408
           + +CS LE T  SL+++V E +   KD L+QL  +A+Q+++S+F SM+ +L+EQNK IL 
Sbjct: 194 EGVCSKLEFTLESLRELVNENNVPTKDALIQLAFSAVQSVHSVFCSMNHVLKEQNKEILS 253

Query: 409 RLVARVTSLKPPLFSSLQLEEVEAIRSSLQSPADSLSNDNSNGRKQVGTTDLHVLLENTN 588
           RL++ + S +PPLFSS Q++E+EA+ SSL + A+    D       V   D +++ EN  
Sbjct: 254 RLLSVIKSHEPPLFSSNQIKEMEAMLSSLVTRANDKEKD-MLAMHGVNGKDSNIVTENAV 312

Query: 589 ND 594
           ND
Sbjct: 313 ND 314


>ref|XP_006438858.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
           gi|557541054|gb|ESR52098.1| hypothetical protein
           CICLE_v10030535mg [Citrus clementina]
          Length = 1208

 Score =  102 bits (255), Expect = 8e-20
 Identities = 65/182 (35%), Positives = 107/182 (58%), Gaps = 15/182 (8%)
 Frame = +1

Query: 94  DSNVEVKNEVG----GDVN-ELDERERSKRVNLIKEELESLNVADAQK----------SY 228
           DS  E++ E G    G++  +L+     K    +KEE++ +NV   ++          S+
Sbjct: 134 DSGDEIEKEEGELEEGEIELDLESESNEKVSEQVKEEMKLINVESIREALESVLRGDISF 193

Query: 229 DRLCSSLETTAVSLQKMVLEGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILL 408
           + +CS LE T  SL+++V E +   KD L+QL  +A+Q+++S+F SM+ +L+EQNK IL 
Sbjct: 194 EGVCSKLEFTLESLRELVNENNVPTKDALIQLAFSAVQSVHSVFCSMNHVLKEQNKEILS 253

Query: 409 RLVARVTSLKPPLFSSLQLEEVEAIRSSLQSPADSLSNDNSNGRKQVGTTDLHVLLENTN 588
           RL++ + S +PPLFSS Q++E+EA+ SSL + A+    D       V   D +++ EN  
Sbjct: 254 RLLSVIKSHEPPLFSSNQIKEMEAMLSSLVTRANDKEKD-MLAMHGVNGKDSNIVTENAV 312

Query: 589 ND 594
           ND
Sbjct: 313 ND 314


>ref|XP_006438857.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
           gi|567892677|ref|XP_006438859.1| hypothetical protein
           CICLE_v10030535mg [Citrus clementina]
           gi|557541053|gb|ESR52097.1| hypothetical protein
           CICLE_v10030535mg [Citrus clementina]
           gi|557541055|gb|ESR52099.1| hypothetical protein
           CICLE_v10030535mg [Citrus clementina]
          Length = 1118

 Score =  102 bits (255), Expect = 8e-20
 Identities = 65/182 (35%), Positives = 107/182 (58%), Gaps = 15/182 (8%)
 Frame = +1

Query: 94  DSNVEVKNEVG----GDVN-ELDERERSKRVNLIKEELESLNVADAQK----------SY 228
           DS  E++ E G    G++  +L+     K    +KEE++ +NV   ++          S+
Sbjct: 134 DSGDEIEKEEGELEEGEIELDLESESNEKVSEQVKEEMKLINVESIREALESVLRGDISF 193

Query: 229 DRLCSSLETTAVSLQKMVLEGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILL 408
           + +CS LE T  SL+++V E +   KD L+QL  +A+Q+++S+F SM+ +L+EQNK IL 
Sbjct: 194 EGVCSKLEFTLESLRELVNENNVPTKDALIQLAFSAVQSVHSVFCSMNHVLKEQNKEILS 253

Query: 409 RLVARVTSLKPPLFSSLQLEEVEAIRSSLQSPADSLSNDNSNGRKQVGTTDLHVLLENTN 588
           RL++ + S +PPLFSS Q++E+EA+ SSL + A+    D       V   D +++ EN  
Sbjct: 254 RLLSVIKSHEPPLFSSNQIKEMEAMLSSLVTRANDKEKD-MLAMHGVNGKDSNIVTENAV 312

Query: 589 ND 594
           ND
Sbjct: 313 ND 314


>ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           3-like [Vitis vinifera]
          Length = 1238

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 76/202 (37%), Positives = 109/202 (53%), Gaps = 16/202 (7%)
 Frame = +1

Query: 94  DSNVEVKNEVGG-DVNE----LDERERSKRVNLIKEELESLNVADAQKSYDRLCSSLETT 258
           DS  +VK+E G  DVNE    L ERE  +RV  I+E+LES+ V +A+KS+  +CS L+ T
Sbjct: 156 DSEPDVKDEGGVLDVNEPEIDLKERELVERVKSIQEDLESVTVIEAEKSFSGVCSRLQNT 215

Query: 259 AVSLQKM-----VLEGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVAR 423
             SLQK+     V E S   KD L Q L+ AI+ L  +F SM+   +E NK +  RL++ 
Sbjct: 216 LGSLQKVFGEKVVGESSVPTKDALAQQLINAIRALNHVFCSMNSNQKELNKDVFSRLLSC 275

Query: 424 VTSLKPPLFSSLQLEEVEAIRSSLQSPADSLSNDNSNGRKQVGTTD------LHVLLENT 585
           V     P+FS   ++EVE + S L +PA   S + S+    V  TD      L   +E++
Sbjct: 276 VECGDSPIFSIQHIKEVEVMMSFLDTPAAQSSAEASDKVNDVQVTDGMNRNILDSSVESS 335

Query: 586 NNDSACLTKCGIESGSAGSLDQ 651
               A   K  ++S S  S +Q
Sbjct: 336 GRAFASAKKLSLDSISVESYNQ 357


>emb|CBI35661.3| unnamed protein product [Vitis vinifera]
          Length = 1184

 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 68/166 (40%), Positives = 95/166 (57%), Gaps = 10/166 (6%)
 Frame = +1

Query: 94  DSNVEVKNEVGG-DVNE----LDERERSKRVNLIKEELESLNVADAQKSYDRLCSSLETT 258
           DS  +VK+E G  DVNE    L ERE  +RV  I+E+LES+ V +A+KS+  +CS L+ T
Sbjct: 167 DSEPDVKDEGGVLDVNEPEIDLKERELVERVKSIQEDLESVTVIEAEKSFSGVCSRLQNT 226

Query: 259 AVSLQKM-----VLEGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVAR 423
             SLQK+     V E S   KD L Q L+ AI+ L  +F SM+   +E NK +  RL++ 
Sbjct: 227 LGSLQKVFGEKVVGESSVPTKDALAQQLINAIRALNHVFCSMNSNQKELNKDVFSRLLSC 286

Query: 424 VTSLKPPLFSSLQLEEVEAIRSSLQSPADSLSNDNSNGRKQVGTTD 561
           V     P+FS   ++EVE + S L +PA   S + S+    V  TD
Sbjct: 287 VECGDSPIFSIQHIKEVEVMMSFLDTPAAQSSAEASDKVNDVQVTD 332


>gb|EXB81217.1| RNA polymerase II C-terminal domain phosphatase-like 3 [Morus
           notabilis]
          Length = 1301

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 71/185 (38%), Positives = 107/185 (57%), Gaps = 8/185 (4%)
 Frame = +1

Query: 94  DSNVEVKNEVGGDVNELDER--ERSKRVNLIKEELESLNVADAQKSYDRLCSSLETTAVS 267
           D N E +N VGG   E+D R  E  KRV+LI E L S+NV +A+KS++ +CS L+ T  S
Sbjct: 180 DLNCEAEN-VGG--LEVDSRRDELEKRVDLIWETLGSVNVVNAEKSFEEVCSRLQRTLES 236

Query: 268 LQKMVLEGSFS--EKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKP 441
           L+ ++ E  FS   KD ++Q+ +TAIQ + S+F SMS+  +EQ K  L RL   V +   
Sbjct: 237 LRGVLSEKEFSFPTKDVVIQMSITAIQVVNSVFCSMSVNQKEQKKETLSRLFCSVKNCGT 296

Query: 442 PLFSSLQLEEVEAIRSSLQSPADSLSNDNSNGRKQVGTTD-LHVL---LENTNNDSACLT 609
           PLFS  Q +E+E + SSL       S+  S+  K+    + LH +   L N N ++A + 
Sbjct: 297 PLFSPEQTKEIELMISSLNPLNVLPSSGASDKEKETQIIERLHEMDSNLTNANAENASIE 356

Query: 610 KCGIE 624
           +  ++
Sbjct: 357 RTSVK 361


>ref|XP_006341905.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           3-like [Solanum tuberosum]
          Length = 1218

 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 66/199 (33%), Positives = 105/199 (52%), Gaps = 24/199 (12%)
 Frame = +1

Query: 88  NKDSNVEVKNEVGGDVN-------ELDERERS-----------KRVNLIKEELESLNVAD 213
           N ++NVE K  +  DV+       EL+E E             K  N ++E+L+S+ + +
Sbjct: 107 NANANVESKVIIDVDVDDDAKEEGELEEGEIDLDAADLVLNFGKEANFVREQLQSVTLDE 166

Query: 214 AQKSYDRLCSSLETTAVSLQKMVLEGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQN 393
             KS+  +CS L+T+ ++L ++ L  S  + D L+QL +TA++T+ S+F SM+   ++QN
Sbjct: 167 THKSFSMVCSKLQTSLLALGELAL--SQDKNDILIQLFMTALRTINSVFYSMNQDQKQQN 224

Query: 394 KAILLRLVARVTSLKPPLFSSLQLEEVEAIRSSLQSPA---DSLSNDNSNGRKQVGTTD- 561
             IL RL+    +  P L SS QL+EV+A+  S+   A   ++  ND  NG K V   D 
Sbjct: 225 TDILSRLLFHAKTQLPALLSSEQLKEVDAVILSINQSAVFSNTQDNDKVNGIKVVELLDK 284

Query: 562 --LHVLLENTNNDSACLTK 612
              H   EN N D   + K
Sbjct: 285 KVSHKSSENANQDFTAVNK 303


>gb|EPS65946.1| hypothetical protein M569_08835, partial [Genlisea aurea]
          Length = 99

 Score = 89.4 bits (220), Expect = 9e-16
 Identities = 50/98 (51%), Positives = 69/98 (70%)
 Frame = +1

Query: 223 SYDRLCSSLETTAVSLQKMVLEGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAI 402
           SYD+  S LE+T   L+KM    S +EKD L ++LLTAI++L+ + SSM+L  + Q  A+
Sbjct: 1   SYDKCFSFLESTVDGLRKMSSLTSLAEKDELPEVLLTAIKSLHLVLSSMALRFKAQRNAM 60

Query: 403 LLRLVARVTSLKPPLFSSLQLEEVEAIRSSLQSPADSL 516
           LLRLV ++TSL+P LFS  QL +VEAI SS++   DSL
Sbjct: 61  LLRLVGQITSLEPNLFSPQQLRQVEAINSSIEPMVDSL 98


>ref|XP_004252660.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           3-like [Solanum lycopersicum]
          Length = 1211

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 20/195 (10%)
 Frame = +1

Query: 88  NKDSNVEVKNEVGGDVNELDERERS--------------KRVNLIKEELESLNVADAQKS 225
           N +S V +  +V  D  E  E E                K  N I+E+L+S+ + +  KS
Sbjct: 110 NGESKVIIDVDVDDDAKEEGELEEGEIDLDSADLVVNFGKEANFIREQLQSVTLDETHKS 169

Query: 226 YDRLCSSLETTAVSLQKMVLEGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAIL 405
           +  +CS L+T+ ++L ++ L  S  + D L+QL +TA++T+ S+F SM+   ++QN  IL
Sbjct: 170 FSMVCSKLQTSLLALGELAL--SQDKNDILIQLFMTALRTINSVFYSMNDHQKQQNTDIL 227

Query: 406 LRLVARVTSLKPPLFSSLQLEEVEAIRSSLQS---PADSLSNDNSNGRKQVGTTDL---H 567
            RL+    +  P L SS QL+E++A+  S+      +++  ND  NG   V   D+   H
Sbjct: 228 SRLLFNAKTQLPALLSSEQLKELDALILSINHSLVSSNTQDNDTVNGINVVQLLDMKDSH 287

Query: 568 VLLENTNNDSACLTK 612
              EN N D   + K
Sbjct: 288 KSSENANQDFTSVNK 302


>gb|AAV92930.1| putative transcription regulator CPL1 [Solanum lycopersicum]
          Length = 1227

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 20/195 (10%)
 Frame = +1

Query: 88  NKDSNVEVKNEVGGDVNELDERERS--------------KRVNLIKEELESLNVADAQKS 225
           N +S V +  +V  D  E  E E                K  N I+E+L+S+ + +  KS
Sbjct: 110 NGESKVIIDVDVDDDAKEEGELEEGEIDLDSADLVVNFGKEANFIREQLQSVTLDETHKS 169

Query: 226 YDRLCSSLETTAVSLQKMVLEGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAIL 405
           +  +CS L+T+ ++L ++ L  S  + D L+QL +TA++T+ S+F SM+   ++QN  IL
Sbjct: 170 FSMVCSKLQTSLLALGELAL--SQDKNDILIQLFMTALRTINSVFYSMNDHQKQQNTDIL 227

Query: 406 LRLVARVTSLKPPLFSSLQLEEVEAIRSSLQS---PADSLSNDNSNGRKQVGTTDL---H 567
            RL+    +  P L SS QL+E++A+  S+      +++  ND  NG   V   D+   H
Sbjct: 228 SRLLFNAKTQLPALLSSEQLKELDALILSINHSLVSSNTQDNDTVNGINVVQLLDMKDSH 287

Query: 568 VLLENTNNDSACLTK 612
              EN N D   + K
Sbjct: 288 KSSENANQDFTSVNK 302


>ref|XP_004310239.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           3-like [Fragaria vesca subsp. vesca]
          Length = 1230

 Score = 83.2 bits (204), Expect = 7e-14
 Identities = 53/151 (35%), Positives = 90/151 (59%), Gaps = 10/151 (6%)
 Frame = +1

Query: 82  VENKDSNVEVKNEVGGDVNELDERERS----------KRVNLIKEELESLNVADAQKSYD 231
           VE ++  +E + E+G D +E  + +++          KRVNL++E LESL + +A+KS+ 
Sbjct: 129 VEKEEEELE-EGEIGFD-SECGDNDKAAGSVGNGVWEKRVNLLREALESLTITEAEKSFG 186

Query: 232 RLCSSLETTAVSLQKMVLEGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLR 411
            +C     +  SL+ ++ E + S K+ LVQ L  A++ + S+F SMS   +EQNK +L R
Sbjct: 187 DVCHRFLDSLESLRGVLSEINVSTKEALVQQLFNAVRAISSVFRSMSADQKEQNKDVLSR 246

Query: 412 LVARVTSLKPPLFSSLQLEEVEAIRSSLQSP 504
           +++   S  P  F + QL+E+E + SS+ SP
Sbjct: 247 ILSSAKS-DPSPFPAEQLKEIEVMSSSMDSP 276


>gb|EOX99661.1| RNA polymerase II C-terminal domain phosphatase-like 3, putative
           [Theobroma cacao]
          Length = 1290

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 52/140 (37%), Positives = 81/140 (57%)
 Frame = +1

Query: 106 EVKNEVGGDVNELDERERSKRVNLIKEELESLNVADAQKSYDRLCSSLETTAVSLQKMVL 285
           +V +   G+V   DE E  KR NLI+  LE + V +A+KS++ +CS L     SL+ ++L
Sbjct: 198 KVLSSEDGNVGNSDELE--KRANLIRGVLEGVTVIEAEKSFEGVCSRLHNALESLRALIL 255

Query: 286 EGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQL 465
           E S   KD L+QL   AI    S F +++   +EQN AIL RL++ V    P LF   ++
Sbjct: 256 ECSVPAKDALIQLAFGAIN---SAFVALNCNSKEQNVAILSRLLSIVKGHDPSLFPPDKM 312

Query: 466 EEVEAIRSSLQSPADSLSND 525
           +E++ +  SL SPA ++  +
Sbjct: 313 KEIDVMLISLNSPARAIDTE 332


>ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Populus trichocarpa]
           gi|550343308|gb|EEE79627.2| hypothetical protein
           POPTR_0003s16280g [Populus trichocarpa]
          Length = 1247

 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 52/129 (40%), Positives = 76/129 (58%), Gaps = 2/129 (1%)
 Frame = +1

Query: 94  DSNVEVKNEVGGDVNELDERERSKRVNLIKEELESLNVADAQKSYDRLCSSLETTAVSLQ 273
           D + E K+E GG V+     +  KRV  I+E+LES++V    KS++ +C  L     SL+
Sbjct: 159 DLDSEGKSE-GGMVSV----DTEKRVKSIREDLESVSVIKDDKSFEAVCLKLHNALESLK 213

Query: 274 KMVL--EGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPL 447
           ++V   E  F  KD+LV+LL TAI  + S FSSM+  L+EQNK + +R ++ V S  P  
Sbjct: 214 ELVRVNENGFPSKDSLVRLLFTAIGAVNSFFSSMNQKLKEQNKGVFMRFLSLVNSHDPSF 273

Query: 448 FSSLQLEEV 474
           FS    +EV
Sbjct: 274 FSPEHTKEV 282


>ref|XP_006296066.1| hypothetical protein CARUB_v10025216mg [Capsella rubella]
           gi|482564774|gb|EOA28964.1| hypothetical protein
           CARUB_v10025216mg [Capsella rubella]
          Length = 1242

 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 14/173 (8%)
 Frame = +1

Query: 85  ENKDSNVEVKNE--VGGDVNELD------ERERSKRVNLIKEELESLNVADAQKSYDRLC 240
           EN  + VE + E  V   VN++D      ER+   +V LI+  LES ++ +AQ +++ +C
Sbjct: 153 ENLFARVEEETESAVLASVNKVDDDRIQKERDLEMKVKLIRAVLESTSLVEAQTAFEGVC 212

Query: 241 SSLETTAVSLQKMVLEGS-FSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLV 417
           S L     SL+++V     F ++DTLVQL   ++QT+ S+F S++   +E NK  + RL+
Sbjct: 213 SKLLGALESLRELVSNNDDFPKRDTLVQLSFASLQTINSVFCSLNNFSKELNKETMSRLL 272

Query: 418 ARVTSLKPPLFSSLQLEEVEAI-----RSSLQSPADSLSNDNSNGRKQVGTTD 561
             V        SS Q  E+EA+     RS++ S A + S DN     Q    D
Sbjct: 273 TLVNDHFSRFLSSNQKNEIEAMNQNLSRSAIASYAATSSGDNVTRMTQTSNGD 325


>ref|XP_002297869.2| CTD phosphatase-like protein 3 [Populus trichocarpa]
           gi|550347145|gb|EEE82674.2| CTD phosphatase-like protein
           3 [Populus trichocarpa]
          Length = 1190

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 43/105 (40%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
 Frame = +1

Query: 166 RVNLIKEELESLNVADAQKSYDRLCSSLETTAVSLQKMV--LEGSFSEKDTLVQLLLTAI 339
           RV  I+++LES++V + +KS++ +C  L     SL+++V   + SF  KD LVQLL  AI
Sbjct: 147 RVKSIRKDLESVSVIETEKSFEAVCLKLHKVLESLKELVGGNDNSFPSKDGLVQLLFMAI 206

Query: 340 QTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQLEEV 474
           + + S+F SM+  L+EQNK +  R  + + S  PP FS  Q +EV
Sbjct: 207 RVVNSVFCSMNKKLKEQNKGVFSRFFSLLNSHYPPFFSPGQNKEV 251


>ref|NP_180912.2| RNA polymerase II C-terminal domain phosphatase-like 3 [Arabidopsis
           thaliana] gi|238055326|sp|Q8LL04.2|CPL3_ARATH RecName:
           Full=RNA polymerase II C-terminal domain
           phosphatase-like 3; Short=FCP-like 3; AltName:
           Full=Carboxyl-terminal phosphatase-like 3; Short=AtCPL3;
           Short=CTD phosphatase-like 3 gi|330253756|gb|AEC08850.1|
           RNA polymerase II C-terminal domain phosphatase-like 3
           [Arabidopsis thaliana]
          Length = 1241

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 1/189 (0%)
 Frame = +1

Query: 79  VVENKDSNVEVKNEVGGDVNELDERERSKRVNLIKEELESLNVADAQKSYDRLCSSLETT 258
           V ++ +S V +  +   D   L ER+  K+V LI+  LES ++ +AQ  ++ +CS +   
Sbjct: 161 VEKDTESVVLISADKVEDDRILKERDLEKKVKLIRGVLESTSLVEAQTGFEGVCSRILGA 220

Query: 259 AVSLQKMVLEGS-FSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSL 435
             SL+++V +   F ++DTLVQL   ++QT+  +F SM+ I +E+NK  + RL+  V   
Sbjct: 221 LESLRELVSDNDDFPKRDTLVQLSFASLQTINYVFCSMNNISKERNKETMSRLLTLVNDH 280

Query: 436 KPPLFSSLQLEEVEAIRSSLQSPADSLSNDNSNGRKQVGTTDLHVLLENTNNDSACLTKC 615
                S  Q  E+E +   L   A ++    S+        +++ + + +N DS    K 
Sbjct: 281 FSQFLSFNQKNEIETMNQDLSRSAIAVFAGTSS------EENVNQMTQPSNGDSFLAKKL 334

Query: 616 GIESGSAGS 642
             ES   G+
Sbjct: 335 TSESTHRGA 343


>gb|AAB80671.1| unknown protein [Arabidopsis thaliana]
          Length = 1066

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 1/189 (0%)
 Frame = +1

Query: 79  VVENKDSNVEVKNEVGGDVNELDERERSKRVNLIKEELESLNVADAQKSYDRLCSSLETT 258
           V ++ +S V +  +   D   L ER+  K+V LI+  LES ++ +AQ  ++ +CS +   
Sbjct: 138 VEKDTESVVLISADKVEDDRILKERDLEKKVKLIRGVLESTSLVEAQTGFEGVCSRILGA 197

Query: 259 AVSLQKMVLEGS-FSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSL 435
             SL+++V +   F ++DTLVQL   ++QT+  +F SM+ I +E+NK  + RL+  V   
Sbjct: 198 LESLRELVSDNDDFPKRDTLVQLSFASLQTINYVFCSMNNISKERNKETMSRLLTLVNDH 257

Query: 436 KPPLFSSLQLEEVEAIRSSLQSPADSLSNDNSNGRKQVGTTDLHVLLENTNNDSACLTKC 615
                S  Q  E+E +   L   A ++    S+        +++ + + +N DS    K 
Sbjct: 258 FSQFLSFNQKNEIETMNQDLSRSAIAVFAGTSS------EENVNQMTQPSNGDSFLAKKL 311

Query: 616 GIESGSAGS 642
             ES   G+
Sbjct: 312 TSESTHRGA 320


>gb|AAM94371.1|AF486633_1 CTD phosphatase-like 3 [Arabidopsis thaliana]
          Length = 1241

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 1/189 (0%)
 Frame = +1

Query: 79  VVENKDSNVEVKNEVGGDVNELDERERSKRVNLIKEELESLNVADAQKSYDRLCSSLETT 258
           V ++ +S V +  +   D   L ER+  K+V LI+  LES ++ +AQ  ++ +CS +   
Sbjct: 161 VEKDTESVVLISADKVEDDRILKERDLEKKVKLIRGVLESTSLVEAQTGFEGVCSRILGA 220

Query: 259 AVSLQKMVLEGS-FSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSL 435
             SL+++V +   F ++DTLVQL   ++QT+  +F SM+ I +E+NK  + RL+  V   
Sbjct: 221 LESLRELVSDNDDFPKRDTLVQLSFASLQTINYVFCSMNNISKERNKETMSRLLTLVNDH 280

Query: 436 KPPLFSSLQLEEVEAIRSSLQSPADSLSNDNSNGRKQVGTTDLHVLLENTNNDSACLTKC 615
                S  Q  E+E +   L   A ++    S+        +++ + + +N DS    K 
Sbjct: 281 FSQFLSFNQKNEIETMNQDLSRSAIAVFAGTSS------EENVNQMTQPSNGDSFLAKKL 334

Query: 616 GIESGSAGS 642
             ES   G+
Sbjct: 335 TSESTHRGA 343


>ref|XP_002881287.1| hypothetical protein ARALYDRAFT_482300 [Arabidopsis lyrata subsp.
           lyrata] gi|297327126|gb|EFH57546.1| hypothetical protein
           ARALYDRAFT_482300 [Arabidopsis lyrata subsp. lyrata]
          Length = 1248

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 48/166 (28%), Positives = 87/166 (52%), Gaps = 1/166 (0%)
 Frame = +1

Query: 148 ERERSKRVNLIKEELESLNVADAQKSYDRLCSSLETTAVSLQKMVLEGS-FSEKDTLVQL 324
           E +  K+V LI+  LES ++ +AQ  ++ +CS +     SL+++V +   F ++DTLVQL
Sbjct: 184 EIDLEKKVKLIRGVLESTSLVEAQTGFEGVCSRILGALESLRELVSDNDDFPKRDTLVQL 243

Query: 325 LLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQLEEVEAIRSSLQSP 504
              ++QT+ S+F S++ + +E+NK  + RL+  V        SS Q  E+EA+   L   
Sbjct: 244 SFASLQTINSVFCSLNNVSKERNKETMSRLLTLVNDHFSRFLSSNQKNEIEAMNQDLSRS 303

Query: 505 ADSLSNDNSNGRKQVGTTDLHVLLENTNNDSACLTKCGIESGSAGS 642
           A ++    S+        +++ + + +N DS    K   E    G+
Sbjct: 304 AIAVYTGTSS------EENVNRMTQPSNGDSFLAKKLSSEGTHRGA 343


>ref|XP_004157633.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
           phosphatase-like 3-like [Cucumis sativus]
          Length = 1249

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 38/128 (29%), Positives = 73/128 (57%)
 Frame = +1

Query: 118 EVGGDVNELDERERSKRVNLIKEELESLNVADAQKSYDRLCSSLETTAVSLQKMVLEGSF 297
           ++ G   +L+ +E  + +  I++ L+ + +  AQKS+  +CS + ++  +  +++     
Sbjct: 181 DINGQEFDLETKELDELLKFIQKTLDGVTIDAAQKSFQEVCSQIHSSIETFVELLQGKVV 240

Query: 298 SEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQLEEVE 477
             KD L+Q L  A++ + S+F SM+L  +E++K  L RL++ V +  PPLFS  Q++ VE
Sbjct: 241 PRKDALIQRLYAALRLINSVFCSMNLSEKEEHKEHLSRLLSYVKNCDPPLFSPEQIKSVE 300

Query: 478 AIRSSLQS 501
               S  S
Sbjct: 301 VKMPSTDS 308