BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00014253
         (352 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-...   111   9e-23
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-...   104   1e-20
gb|EOY29838.1| RNApolymerase sigma-subunit C, putative [Theobrom...   100   2e-19
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ...    96   4e-18
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]    96   4e-18
ref|XP_006450764.1| hypothetical protein CICLE_v10007968mg [Citr...    95   9e-18
ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citr...    95   9e-18
ref|XP_006450758.1| hypothetical protein CICLE_v10007968mg [Citr...    95   9e-18
ref|XP_006450757.1| hypothetical protein CICLE_v10007968mg [Citr...    95   9e-18
ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Popu...    88   1e-15
gb|EXB75636.1| RNA polymerase sigma factor rpoD [Morus notabilis]      86   4e-15
ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-...    86   5e-15
gb|EMJ24122.1| hypothetical protein PRUPE_ppa003696mg [Prunus pe...    85   1e-14
ref|XP_006290815.1| hypothetical protein CARUB_v10016920mg [Caps...    82   7e-14
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [...    82   7e-14
emb|CAB83107.1| sigma factor 3 [Sinapis alba]                          81   1e-13
ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-...    81   2e-13
ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp....    81   2e-13
ref|XP_006403640.1| hypothetical protein EUTSA_v10010251mg [Eutr...    79   5e-13
ref|NP_190960.1| RNA polymerase sigma-subunit C [Arabidopsis tha...    78   1e-12

>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
           tuberosum]
          Length = 555

 Score =  111 bits (278), Expect = 9e-23
 Identities = 59/117 (50%), Positives = 78/117 (66%)
 Frame = +1

Query: 1   NDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXXAISLQELPSETISRDFQQPKFVSPRRT 180
           +D V N + KV ++S                   I   +  ++ I  D QQPKF S +RT
Sbjct: 191 DDLVGNAIDKVVVRSRKKQERKSRRNRASRNANDIITVQPHTKNIQEDLQQPKFYSGKRT 250

Query: 181 SRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKE 351
             SRNKRQKIA+NEAEMS GVK+VA+LE++R+ILEEETG++A+ SSWAEAAGI++KE
Sbjct: 251 QASRNKRQKIAKNEAEMSRGVKLVAQLERIRSILEEETGRVATFSSWAEAAGIEQKE 307


>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
           lycopersicum]
          Length = 551

 Score =  104 bits (259), Expect = 1e-20
 Identities = 57/117 (48%), Positives = 76/117 (64%)
 Frame = +1

Query: 1   NDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXXAISLQELPSETISRDFQQPKFVSPRRT 180
           +D V N + KV ++S                   I   +  ++ I  D QQ KF S +RT
Sbjct: 187 DDLVGNAMDKVVVRSRKKQERMSRRKRASRNANDIITVQPHTKNIQEDLQQLKFYSGKRT 246

Query: 181 SRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKE 351
             SR KRQKIA+NEAEMS GVK+VA+LE++R+ILEEETGQ+A+ SSWA+AAGI++KE
Sbjct: 247 HASRTKRQKIAKNEAEMSKGVKLVAQLERIRSILEEETGQVATFSSWAKAAGIEQKE 303


>gb|EOY29838.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
          Length = 848

 Score =  100 bits (249), Expect = 2e-19
 Identities = 51/82 (62%), Positives = 64/82 (78%)
 Frame = +1

Query: 103 ISLQELPSETISRDFQQPKFVSPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTIL 282
           IS Q +PS T+   FQ+PK  S +R S SR++R +IARNEAEMS GVK+VA LE++RT L
Sbjct: 517 ISTQLMPSNTLHGRFQKPKVSSAKRVSDSRSRRLRIARNEAEMSKGVKVVANLERIRTTL 576

Query: 283 EEETGQIASLSSWAEAAGIKKK 348
           EEETG+ ASLS WAEAAG+ +K
Sbjct: 577 EEETGRAASLSCWAEAAGVSEK 598


>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
           gi|296081598|emb|CBI20603.3| unnamed protein product
           [Vitis vinifera]
          Length = 561

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 53/116 (45%), Positives = 70/116 (60%)
 Frame = +1

Query: 1   NDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXXAISLQELPSETISRDFQQPKFVSPRRT 180
           N +VD+H+ KV ++SG                  I    LPS+TI +   +P   + +RT
Sbjct: 196 NGTVDDHLDKVVVRSGKKEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRT 255

Query: 181 SRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKK 348
             SR KR   A+NEAEMS GVK+VA LE++R  LEEE G +ASLS+WAEAAG+ KK
Sbjct: 256 LNSRRKRLMNAKNEAEMSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDKK 311


>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
          Length = 611

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 53/116 (45%), Positives = 70/116 (60%)
 Frame = +1

Query: 1   NDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXXAISLQELPSETISRDFQQPKFVSPRRT 180
           N +VD+H+ KV ++SG                  I    LPS+TI +   +P   + +RT
Sbjct: 246 NGTVDDHLDKVVVRSGKKEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRT 305

Query: 181 SRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKK 348
             SR KR   A+NEAEMS GVK+VA LE++R  LEEE G +ASLS+WAEAAG+ KK
Sbjct: 306 LNSRRKRLMNAKNEAEMSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDKK 361


>ref|XP_006450764.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
           gi|557553990|gb|ESR64004.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
          Length = 442

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 49/116 (42%), Positives = 68/116 (58%)
 Frame = +1

Query: 1   NDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXXAISLQELPSETISRDFQQPKFVSPRRT 180
           NDS D H+ K+ + S                    SL  LPSE +    +QP   SP R 
Sbjct: 169 NDSRDYHMGKILVPSKRKGKRKLKTARVSEESIETSLLSLPSEALQEGLKQPTIFSPERA 228

Query: 181 SRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKK 348
             SR +R  IARNEAEMS GV++VA LE+++T LE+E+G+ ASL+ WA+AAG+ ++
Sbjct: 229 LNSRGRRLMIARNEAEMSKGVQVVANLERIKTTLEKESGKAASLNCWAQAAGVSER 284


>ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
           gi|557553989|gb|ESR64003.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
          Length = 534

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 49/116 (42%), Positives = 68/116 (58%)
 Frame = +1

Query: 1   NDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXXAISLQELPSETISRDFQQPKFVSPRRT 180
           NDS D H+ K+ + S                    SL  LPSE +    +QP   SP R 
Sbjct: 169 NDSRDYHMGKILVPSKRKGKRKLKTARVSEESIETSLLSLPSEALQEGLKQPTIFSPERA 228

Query: 181 SRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKK 348
             SR +R  IARNEAEMS GV++VA LE+++T LE+E+G+ ASL+ WA+AAG+ ++
Sbjct: 229 LNSRGRRLMIARNEAEMSKGVQVVANLERIKTTLEKESGKAASLNCWAQAAGVSER 284


>ref|XP_006450758.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
           gi|567917506|ref|XP_006450759.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
           gi|557553984|gb|ESR63998.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
           gi|557553985|gb|ESR63999.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
          Length = 383

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 49/116 (42%), Positives = 68/116 (58%)
 Frame = +1

Query: 1   NDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXXAISLQELPSETISRDFQQPKFVSPRRT 180
           NDS D H+ K+ + S                    SL  LPSE +    +QP   SP R 
Sbjct: 169 NDSRDYHMGKILVPSKRKGKRKLKTARVSEESIETSLLSLPSEALQEGLKQPTIFSPERA 228

Query: 181 SRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKK 348
             SR +R  IARNEAEMS GV++VA LE+++T LE+E+G+ ASL+ WA+AAG+ ++
Sbjct: 229 LNSRGRRLMIARNEAEMSKGVQVVANLERIKTTLEKESGKAASLNCWAQAAGVSER 284


>ref|XP_006450757.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
           gi|567917512|ref|XP_006450762.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
           gi|557553983|gb|ESR63997.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
           gi|557553988|gb|ESR64002.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
          Length = 381

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 49/116 (42%), Positives = 68/116 (58%)
 Frame = +1

Query: 1   NDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXXAISLQELPSETISRDFQQPKFVSPRRT 180
           NDS D H+ K+ + S                    SL  LPSE +    +QP   SP R 
Sbjct: 169 NDSRDYHMGKILVPSKRKGKRKLKTARVSEESIETSLLSLPSEALQEGLKQPTIFSPERA 228

Query: 181 SRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKK 348
             SR +R  IARNEAEMS GV++VA LE+++T LE+E+G+ ASL+ WA+AAG+ ++
Sbjct: 229 LNSRGRRLMIARNEAEMSKGVQVVANLERIKTTLEKESGKAASLNCWAQAAGVSER 284


>ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Populus trichocarpa]
           gi|222854562|gb|EEE92109.1| hypothetical protein
           POPTR_0006s25090g [Populus trichocarpa]
          Length = 559

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 43/77 (55%), Positives = 59/77 (76%)
 Frame = +1

Query: 118 LPSETISRDFQQPKFVSPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETG 297
           LPS+T+  +  +P FV  +RTS S ++R  IARNEA+M+ GVK+ ++LE++RT LEEETG
Sbjct: 235 LPSKTVQNNLPKPTFV--KRTSSSSSRRSLIARNEAKMTRGVKVASDLERIRTTLEEETG 292

Query: 298 QIASLSSWAEAAGIKKK 348
           Q+ SLS WAEA G+ KK
Sbjct: 293 QVVSLSCWAEATGLDKK 309


>gb|EXB75636.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 476

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 43/82 (52%), Positives = 60/82 (73%)
 Frame = +1

Query: 103 ISLQELPSETISRDFQQPKFVSPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTIL 282
           +S + L S+ I +D  +    S RR   SR++R+  A+NEAEMSTGVK+VA+LE++RT L
Sbjct: 189 LSSRSLSSDAIWQDLHKSSASSVRRAVNSRSRRRACAKNEAEMSTGVKVVAKLEQIRTAL 248

Query: 283 EEETGQIASLSSWAEAAGIKKK 348
           E+ETG +AS S WAEAAG+ +K
Sbjct: 249 EKETGSVASFSCWAEAAGVDEK 270


>ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-like [Citrus sinensis]
          Length = 534

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 45/116 (38%), Positives = 65/116 (56%)
 Frame = +1

Query: 1   NDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXXAISLQELPSETISRDFQQPKFVSPRRT 180
           +DS D H+ K+ + S                     L  LPSE +    +QP   S  R 
Sbjct: 169 DDSRDYHMGKILVPSKRKGKRKLKTARVSEESIETYLLSLPSEALQEGLKQPTIFSAERA 228

Query: 181 SRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKK 348
             SR +R  IARNEAEMS GV++VA LE+++T LE+E+G+ A L+ WA+AAG+ ++
Sbjct: 229 LNSRGRRLMIARNEAEMSKGVQVVANLERIKTTLEKESGKAARLNCWAQAAGVSER 284


>gb|EMJ24122.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica]
          Length = 555

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 43/112 (38%), Positives = 70/112 (62%)
 Frame = +1

Query: 13  DNHVSKVFIQSGXXXXXXXXXXXXXXXXXAISLQELPSETISRDFQQPKFVSPRRTSRSR 192
           DN+V ++ ++SG                  +S   LP +TI +  ++P   S +R S  R
Sbjct: 196 DNNVGEIIVRSGKKEERRSRKRTSDNAI--VSSNSLPPKTIWKGLKKPTLSSGKRASNYR 253

Query: 193 NKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKK 348
           ++R  I++NEAEMS GVK++A+LE+++  LE+ETG++A+L  WAEAAG+ +K
Sbjct: 254 SRRLTISKNEAEMSIGVKVIADLERIKETLEKETGKVATLRCWAEAAGVHEK 305


>ref|XP_006290815.1| hypothetical protein CARUB_v10016920mg [Capsella rubella]
           gi|482559522|gb|EOA23713.1| hypothetical protein
           CARUB_v10016920mg [Capsella rubella]
          Length = 581

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 38/59 (64%), Positives = 52/59 (88%)
 Frame = +1

Query: 172 RRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKK 348
           RR  + R KR++I+RNEAEMSTGVK+VA++E++RT LEEE+G++ASLS WAEAAG+ +K
Sbjct: 272 RRPPKYRKKRERISRNEAEMSTGVKIVADMERIRTQLEEESGKVASLSCWAEAAGMNEK 330


>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 560

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 40/77 (51%), Positives = 57/77 (74%)
 Frame = +1

Query: 118 LPSETISRDFQQPKFVSPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETG 297
           LPS  I    ++P   S ++ S+S+++R  IARNEAEM+ G+K++A+LEK+RT LEEET 
Sbjct: 234 LPSRPIQSGSEKPTVSSGKKASKSKSRRLIIARNEAEMARGIKVLADLEKIRTTLEEETE 293

Query: 298 QIASLSSWAEAAGIKKK 348
           ++ SLS WAEAAG+  K
Sbjct: 294 RVVSLSCWAEAAGLDVK 310


>emb|CAB83107.1| sigma factor 3 [Sinapis alba]
          Length = 567

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 37/59 (62%), Positives = 52/59 (88%)
 Frame = +1

Query: 172 RRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKK 348
           R+ S+ R KR++I+RNEAEMS GVK+VA++E++RT LEEETG++AS+S WAEAAG+ +K
Sbjct: 258 RKPSKYRKKRERISRNEAEMSQGVKIVADMERIRTKLEEETGKVASMSCWAEAAGMNQK 316


>ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-like [Fragaria vesca
           subsp. vesca]
          Length = 545

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 38/77 (49%), Positives = 57/77 (74%)
 Frame = +1

Query: 118 LPSETISRDFQQPKFVSPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETG 297
           LP + +   F++P   S RR S SR++R  +A+NEAEMS GVK++A+LE+L+  LE+ETG
Sbjct: 218 LPVKQMREGFKKPNPSSVRRASNSRSRRLMMAKNEAEMSVGVKVIADLERLKVTLEKETG 277

Query: 298 QIASLSSWAEAAGIKKK 348
           ++ +L  WAEAAG+ +K
Sbjct: 278 KVPTLRCWAEAAGVDEK 294


>ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323785|gb|EFH54206.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 568

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 37/59 (62%), Positives = 52/59 (88%)
 Frame = +1

Query: 172 RRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKK 348
           RR  + R KR++I++NEAEMSTGVK+VA++E++RT LEEE+G++ASLS WAEAAG+ +K
Sbjct: 259 RRPPKYRKKRERISKNEAEMSTGVKIVADMERIRTQLEEESGKVASLSCWAEAAGMNEK 317


>ref|XP_006403640.1| hypothetical protein EUTSA_v10010251mg [Eutrema salsugineum]
           gi|312281919|dbj|BAJ33825.1| unnamed protein product
           [Thellungiella halophila] gi|557104759|gb|ESQ45093.1|
           hypothetical protein EUTSA_v10010251mg [Eutrema
           salsugineum]
          Length = 562

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 38/74 (51%), Positives = 56/74 (75%)
 Frame = +1

Query: 124 SETISRDFQQPKFVSPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQI 303
           S T   D   P+    R++S+ R KR++I+RNEAEMS G K+VA++E++RT LEEE+G++
Sbjct: 240 SRTTWNDIDAPRL---RKSSKYRKKRERISRNEAEMSAGAKIVADMERIRTKLEEESGKV 296

Query: 304 ASLSSWAEAAGIKK 345
           AS+S WAEAAG+ +
Sbjct: 297 ASMSCWAEAAGMNE 310


>ref|NP_190960.1| RNA polymerase sigma-subunit C [Arabidopsis thaliana]
           gi|75098239|sp|O24621.1|SIGC_ARATH RecName: Full=RNA
           polymerase sigma factor sigC; Short=Sigma factor C;
           Short=Sigma-C; AltName: Full=RNA polymerase sigma factor
           sig3; Short=Atsig3; Short=Sigma factor 3; Flags:
           Precursor gi|2353175|gb|AAB69386.1| sigma factor 3
           [Arabidopsis thaliana] gi|2463554|dbj|BAA22530.1| SigC
           [Arabidopsis thaliana] gi|5478585|dbj|BAA82450.1| sigma
           factor SigC [Arabidopsis thaliana]
           gi|7630012|emb|CAB88354.1| sigma factor SigC
           [Arabidopsis thaliana] gi|133778870|gb|ABO38775.1|
           At3g53920 [Arabidopsis thaliana]
           gi|332645638|gb|AEE79159.1| RNApolymerase sigma-subunit
           C [Arabidopsis thaliana]
          Length = 571

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 36/59 (61%), Positives = 50/59 (84%)
 Frame = +1

Query: 172 RRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKK 348
           RR  + R KR++I+RNE EMSTGVK+VA++E++RT LEEE+G++ASLS WA AAG+ +K
Sbjct: 262 RRPPKYRKKRERISRNETEMSTGVKIVADMERIRTQLEEESGKVASLSCWAAAAGMNEK 320