BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00014172
         (2178 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...  1038   0.0  
gb|EPS73635.1| hypothetical protein M569_01118, partial [Genlise...  1031   0.0  
ref|XP_004239191.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...  1018   0.0  
ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis ...  1002   0.0  
ref|XP_004289288.1| PREDICTED: DNA topoisomerase 3-alpha-like [F...   981   0.0  
ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   980   0.0  
gb|EOX92637.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao]       979   0.0  
ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Popu...   965   0.0  
ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   945   0.0  
ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   944   0.0  
gb|EOX92638.1| Topoisomerase 3alpha isoform 2, partial [Theobrom...   933   0.0  
ref|XP_006581778.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   924   0.0  
ref|XP_003526873.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   909   0.0  
ref|XP_006649448.1| PREDICTED: DNA topoisomerase 3-alpha-like [O...   906   0.0  
ref|NP_201197.1| topoisomerase 3alpha [Arabidopsis thaliana] gi|...   905   0.0  
ref|XP_002864876.1| hypothetical protein ARALYDRAFT_496584 [Arab...   904   0.0  
ref|XP_006581777.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   900   0.0  
ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ric...   898   0.0  
ref|XP_006279975.1| hypothetical protein CARUB_v10025845mg [Caps...   895   0.0  
ref|XP_006394227.1| hypothetical protein EUTSA_v10003618mg [Eutr...   890   0.0  

>ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum tuberosum]
          Length = 915

 Score = 1038 bits (2685), Expect = 0.0
 Identities = 506/693 (73%), Positives = 556/693 (80%), Gaps = 34/693 (4%)
 Frame = -1

Query: 2178 QFPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCV 1999
            QFPTLGF+VER+WE+Q+HEPEEFWTINCTHNS+EGTATFNWMRGHLFDYTC   IYEMC+
Sbjct: 227  QFPTLGFVVERYWEIQAHEPEEFWTINCTHNSDEGTATFNWMRGHLFDYTCGVTIYEMCI 286

Query: 1998 QEPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK--------------- 1864
            QEP ATVT V+QQEKLKYPPHPLSTIELEKRASRYFRMSSE TMK               
Sbjct: 287  QEPIATVTKVKQQEKLKYPPHPLSTIELEKRASRYFRMSSEQTMKVAEDLYQNGFISYPR 346

Query: 1863 -------------TIVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTK 1723
                         T+VQEQ+GHPVWG YAQRLLDP++ LWRNP+GGGHDDKAHPPIHPTK
Sbjct: 347  TETDSFSEKTDLRTMVQEQEGHPVWGIYAQRLLDPQSGLWRNPSGGGHDDKAHPPIHPTK 406

Query: 1722 FSAGESGWSPDHHKVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYL 1543
            FSAGE+ WS DHH+VYELVVRHFLACVSQPA+GAET VEIDIAGE FSA GRVI+AKNYL
Sbjct: 407  FSAGETRWSQDHHRVYELVVRHFLACVSQPAVGAETIVEIDIAGESFSACGRVILAKNYL 466

Query: 1542 DVYRFETWGGSMIPTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATM 1363
            DVYRFE+WGGS+IPTY++GQQFTPTTLTLD+GVTRPPPLLSEADLL CMDKAGIGTDATM
Sbjct: 467  DVYRFESWGGSVIPTYSFGQQFTPTTLTLDSGVTRPPPLLSEADLLGCMDKAGIGTDATM 526

Query: 1362 HDHIKKLLDRFYATKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMG 1183
            HDHIKKLLDRFYA KDS+ RFSPTKLGEALVMGYDDMGYELWKPYLRAMME DMKAVS+G
Sbjct: 527  HDHIKKLLDRFYAIKDSNTRFSPTKLGEALVMGYDDMGYELWKPYLRAMMECDMKAVSIG 586

Query: 1182 TKRKAEVLEACLQQMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGL 1003
            TKRKAEVLE CLQQMKACF DAR NKGKL EAMA+FFERSNRS+  EQ A+G+VVR+CGL
Sbjct: 587  TKRKAEVLETCLQQMKACFSDARTNKGKLLEAMAIFFERSNRSSGGEQQAVGDVVRRCGL 646

Query: 1002 CQESDMVLRKKPDGNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFK 823
            C ESDMVLR+KPDGNFMVGCLG+PQCRNVVWLPGSVSEA VT N C++CSPGPV+ IQFK
Sbjct: 647  CLESDMVLRQKPDGNFMVGCLGYPQCRNVVWLPGSVSEASVTENTCTSCSPGPVFKIQFK 706

Query: 822  FRRLEIPPNYNVNHLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXX 643
            FRRLEIPPNY+V HLGCIGGCDDILRQLVE+CGTGSRNNS+                   
Sbjct: 707  FRRLEIPPNYSVQHLGCIGGCDDILRQLVEICGTGSRNNSNTSGRGRGNPTASSSAQRGN 766

Query: 642  XXXXXAW----QTGHSSGSYANAPESSRGRNSRSQEA--GESSIPCSSCGAPCNLRTANT 481
                 +     QTGH S    +  ++SRGR +R+QE   GESSIPC+SCGAPC LRTANT
Sbjct: 767  SRAQSSCAYCRQTGHLSNDCPS--QASRGRTARAQEVDNGESSIPCNSCGAPCILRTANT 824

Query: 480  PANRGRKFYSCQAQGCNFFVWEDNASSGGTVPRGSIXXXXXXXXXXXXXXXXXXXXXXXX 301
              NRGRKF+SCQ+Q CNFFVWEDN  +GG   R +                         
Sbjct: 825  ANNRGRKFFSCQSQECNFFVWEDNL-NGGRAERAN-TSASTSSGRGGRGRGRGQSGAHSS 882

Query: 300  XXSFMSATGEPISGRCFVCGDPGHFANACPNRG 202
              SF+SATGEPI+GRCF+CGDPGHFAN CP RG
Sbjct: 883  NVSFVSATGEPITGRCFICGDPGHFANVCPRRG 915


>gb|EPS73635.1| hypothetical protein M569_01118, partial [Genlisea aurea]
          Length = 813

 Score = 1031 bits (2666), Expect = 0.0
 Identities = 508/710 (71%), Positives = 548/710 (77%), Gaps = 52/710 (7%)
 Frame = -1

Query: 2178 QFPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCV 1999
            QFPTLGF+VER+WE+QSHEPEEFW I CTH+SEEG  TFNWMRGHLFDYTCATI+YEMCV
Sbjct: 126  QFPTLGFVVERYWEIQSHEPEEFWGIGCTHSSEEGVTTFNWMRGHLFDYTCATILYEMCV 185

Query: 1998 QEPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK--------------- 1864
            QEPTATVT+VRQQEKLKYPP+PLSTIELEKRASRYFRMSSE TMK               
Sbjct: 186  QEPTATVTSVRQQEKLKYPPYPLSTIELEKRASRYFRMSSEQTMKVAEDLYQAGFISYPR 245

Query: 1863 -------------TIVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTK 1723
                         TIVQEQQGHP WGSYAQRLLDPE  LW+NP  GGHDDKAHPPIHPTK
Sbjct: 246  TETDCFSERTDLRTIVQEQQGHPAWGSYAQRLLDPETGLWKNPGAGGHDDKAHPPIHPTK 305

Query: 1722 FSAGESGWSPDHHKVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYL 1543
            FS+GESGWS DHHKVYELVVRHFLACVSQPAIGAETTVEIDIA EQFSASGR IIAKNYL
Sbjct: 306  FSSGESGWSQDHHKVYELVVRHFLACVSQPAIGAETTVEIDIASEQFSASGRAIIAKNYL 365

Query: 1542 DVYRFETWGGSMIPTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATM 1363
            DVYRFE WGGS+IP Y YGQQF PTTLTLD+GVTRPPPLLSEADLL CMDKAGIGTDATM
Sbjct: 366  DVYRFEKWGGSLIPAYAYGQQFIPTTLTLDSGVTRPPPLLSEADLLGCMDKAGIGTDATM 425

Query: 1362 HDHIKKLLDRFYATKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMG 1183
            HDHIKKLLDR YATKDS+ RFSPTKLGEALVMGYDDMGYELWKP+LRAMMESDMK+VSMG
Sbjct: 426  HDHIKKLLDRCYATKDSNTRFSPTKLGEALVMGYDDMGYELWKPHLRAMMESDMKSVSMG 485

Query: 1182 TKRKAEVLEACLQQMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGL 1003
            TKRK EVLEACLQQMKACF+DAR NK KLFEAM VFFERSNRS + +QH  G++VRKCGL
Sbjct: 486  TKRKGEVLEACLQQMKACFLDARANKEKLFEAMGVFFERSNRSQTADQHMSGDIVRKCGL 545

Query: 1002 CQESDMVLRKKPDGNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFK 823
            CQESDMVLRKKPDGNFMVGCLG+PQCRNVVWLPGSVS A VTT +CSTCSPGPVY+IQFK
Sbjct: 546  CQESDMVLRKKPDGNFMVGCLGYPQCRNVVWLPGSVSSASVTTVVCSTCSPGPVYMIQFK 605

Query: 822  FRRLEIPPNYNVNHLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXX 643
            FR+LEIPPNYNV+HLGC+GGCD +LRQLVE+CGTGSR+NS+V                  
Sbjct: 606  FRQLEIPPNYNVDHLGCVGGCDSVLRQLVEICGTGSRSNSNVPGTG-------------- 651

Query: 642  XXXXXAWQTGHSSGSYANAPESSRGRNSRSQE---------------------AGESSIP 526
                     G +S S  N P+    RN  +                       AGESS+P
Sbjct: 652  --------QGQTSSSSFNHPQHGNLRNRGAAHPTTTGRSSARHPSPSSTTHVGAGESSVP 703

Query: 525  CSSCGAPCNLRTANTPANRGRKFYSCQAQGCNFFVWEDNASSGGT---VPRGSIXXXXXX 355
            C SCGAPCNLRTANT ANRGR+FYSCQAQ CNFFVW+D+A SGG       G        
Sbjct: 704  CGSCGAPCNLRTANTAANRGRQFYSCQAQSCNFFVWKDDAGSGGVRGGDGGGVSRRGGSS 763

Query: 354  XXXXXXXXXXXXXXXXXXXXSFMSATGEPISGRCFVCGDPGHFANACPNR 205
                                SF+SATGEP+SGRCF+CG+P HFAN CPNR
Sbjct: 764  NQRGRGWGRRRHDEQRRATTSFVSATGEPVSGRCFLCGEPSHFANECPNR 813


>ref|XP_004239191.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum lycopersicum]
          Length = 910

 Score = 1018 bits (2631), Expect = 0.0
 Identities = 498/689 (72%), Positives = 547/689 (79%), Gaps = 30/689 (4%)
 Frame = -1

Query: 2178 QFPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCV 1999
            QFPTLGF+VER+WE+Q+HEPEEFWTINCTHNS+EGTATFNWMRGHLFDYTC  +IYEMC+
Sbjct: 227  QFPTLGFVVERYWEIQAHEPEEFWTINCTHNSDEGTATFNWMRGHLFDYTCGVMIYEMCI 286

Query: 1998 QEPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK--------------- 1864
            QEP ATVT V+QQEKLKYPPHPLSTIELEKRASRYFRMSSE TMK               
Sbjct: 287  QEPIATVTKVKQQEKLKYPPHPLSTIELEKRASRYFRMSSEQTMKVAEDLYQNGFISYPR 346

Query: 1863 -------------TIVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTK 1723
                         T+VQEQ+GHPVWG+YAQRLLDP++ LWRNP+GGGHDDKAHPPIHPTK
Sbjct: 347  TETDCFSDKTDLRTMVQEQEGHPVWGTYAQRLLDPQSGLWRNPSGGGHDDKAHPPIHPTK 406

Query: 1722 FSAGESGWSPDHHKVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYL 1543
            FSAGE+ WS DHH+VYELVVRHFLACVSQPA+GAET VEIDIAGE FSA GRVI+AKNYL
Sbjct: 407  FSAGETRWSQDHHRVYELVVRHFLACVSQPAVGAETIVEIDIAGESFSACGRVILAKNYL 466

Query: 1542 DVYRFETWGGSMIPTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATM 1363
            DVYRFE+WGGS+IPTY++GQQFTPTTLTLD+GV RPPPLLSEADLL CMDKAGIGTDATM
Sbjct: 467  DVYRFESWGGSVIPTYSFGQQFTPTTLTLDSGVIRPPPLLSEADLLGCMDKAGIGTDATM 526

Query: 1362 HDHIKKLLDRFYATKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMG 1183
            HDHIKKLLDRFYA KDS+ RFSPTKLGEALVMGYDDMGYELWKPYLRAMME DMKAVS G
Sbjct: 527  HDHIKKLLDRFYAIKDSNTRFSPTKLGEALVMGYDDMGYELWKPYLRAMMECDMKAVSTG 586

Query: 1182 TKRKAEVLEACLQQMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGL 1003
            TKRKAEVLE CLQQMKACF DAR NK KL EAMA+FFERSNRS+S EQ A+G VVR+CGL
Sbjct: 587  TKRKAEVLETCLQQMKACFSDARTNKEKLLEAMAIFFERSNRSSSGEQQAVGAVVRRCGL 646

Query: 1002 CQESDMVLRKKPDGNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFK 823
            C ESDMVLR+KPDGNFMVGCLG+PQCRNVVWLPGSVSEA VT N C TCSPGPV+ IQFK
Sbjct: 647  CLESDMVLRQKPDGNFMVGCLGYPQCRNVVWLPGSVSEASVTENTCITCSPGPVFKIQFK 706

Query: 822  FRRLEIPPNYNVNHLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXX 643
            FR+ EIPP+Y+V HLGCIGGCDDILRQLVE+CGTGSRN+                     
Sbjct: 707  FRQQEIPPDYSVQHLGCIGGCDDILRQLVEICGTGSRNSRGRGNPTAFSSAQRDNSRAQS 766

Query: 642  XXXXXAWQTGHSSGSYANAPESSRGRNSRSQEA--GESSIPCSSCGAPCNLRTANTPANR 469
                   QTGH S    +  ++SR R +R+QE   GESS+PC+SCGAPC LRTANT  NR
Sbjct: 767  SCAYCR-QTGHLSNDCPS--QASRDRTARAQEVDNGESSMPCNSCGAPCILRTANTANNR 823

Query: 468  GRKFYSCQAQGCNFFVWEDNASSGGTVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXSF 289
            GRKF+SCQ+  CNFFVWEDN  SGG   R +                           SF
Sbjct: 824  GRKFFSCQSSECNFFVWEDNL-SGGRAERAN-TSASTSSGRGGRGRGRGQSGAHSSNVSF 881

Query: 288  MSATGEPISGRCFVCGDPGHFANACPNRG 202
            +SATGEPI+ RCF+CGDPGHFAN CP RG
Sbjct: 882  VSATGEPITVRCFICGDPGHFANVCPRRG 910


>ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis vinifera]
          Length = 914

 Score = 1002 bits (2591), Expect = 0.0
 Identities = 491/698 (70%), Positives = 544/698 (77%), Gaps = 39/698 (5%)
 Frame = -1

Query: 2178 QFPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCV 1999
            QFPTLGF+VER+WE+QSHEPEEFWTINC+H S+EGT+TFNWMR HLFDYTCA IIYEMC+
Sbjct: 217  QFPTLGFVVERYWEIQSHEPEEFWTINCSHKSDEGTSTFNWMRAHLFDYTCAVIIYEMCI 276

Query: 1998 QEPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMKT-------------- 1861
            QEPTATVT VRQQEKLKYPPHPL+TIELEKRASRYF MSSEHTMK               
Sbjct: 277  QEPTATVTKVRQQEKLKYPPHPLNTIELEKRASRYFHMSSEHTMKVAEDLYQTGFISYPR 336

Query: 1860 --------------IVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTK 1723
                          IVQEQ GHP+WGSYAQRLLDP A LWRNP+ GGHDDKAHPPIHPTK
Sbjct: 337  TETDYFSERTDLHGIVQEQLGHPIWGSYAQRLLDPGAGLWRNPSNGGHDDKAHPPIHPTK 396

Query: 1722 FSAGESGWSPDHHKVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYL 1543
            FSAGESGWS DH ++YELVVRHFLACVSQPA+GAET VEIDIAGE FS+SGRVIIAKNYL
Sbjct: 397  FSAGESGWSQDHQRLYELVVRHFLACVSQPAVGAETIVEIDIAGESFSSSGRVIIAKNYL 456

Query: 1542 DVYRFETWGGSMIPTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATM 1363
            DVYRFE+WGGSMIPTY +GQQF PTTLTLD+GVTRPPPLLSEADLL+CMDKAGIGTDATM
Sbjct: 457  DVYRFESWGGSMIPTYVFGQQFIPTTLTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATM 516

Query: 1362 HDHIKKLLDRFYATKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMG 1183
            HDHIKKLLDRFYATKDS+ RFSPT LGEALVMGYDDMGYELWKPYLR+MME DMKAVS+G
Sbjct: 517  HDHIKKLLDRFYATKDSNTRFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSIG 576

Query: 1182 TKRKAEVLEACLQQMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGL 1003
            TKR+ EVL  CL+QMKACF+DARLNK KL EAMA+FFERSNRS+ +EQH +G+VVR+C L
Sbjct: 577  TKRRNEVLTTCLEQMKACFLDARLNKVKLLEAMALFFERSNRSSGDEQHEVGDVVRQCTL 636

Query: 1002 CQESDMVLRKKPDGNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFK 823
            CQESDMVLR+KPDGNFMVGCLG+PQCRNVVWLPGS+SEA +TT  C+ C+PGPVY IQFK
Sbjct: 637  CQESDMVLRRKPDGNFMVGCLGYPQCRNVVWLPGSISEAAITTISCNHCTPGPVYKIQFK 696

Query: 822  FRRLEIPPNYNVNHLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXX 643
            FRRLEIPPNYN++HLGC+ GCD+ILRQL E+CGTGSR  S+                   
Sbjct: 697  FRRLEIPPNYNIDHLGCVCGCDEILRQLTEICGTGSR-ISARGRGSNASSTNAQRSNTRQ 755

Query: 642  XXXXXAWQTGHSSGSYANAPESSRGRNSR--SQEAGESSIPCSSCGAPCNLRTANTPANR 469
                   QTGHSS    +    SR   S   +  +GESSIPC+ CG PC LRTANT  NR
Sbjct: 756  TACIHCSQTGHSSNDCPSRVPRSRNSQSHRTNMPSGESSIPCNVCGTPCILRTANTENNR 815

Query: 468  GRKFYSCQAQGCNFFVWED--NASSGG------TVPRGSIXXXXXXXXXXXXXXXXXXXX 313
            GRKFYSCQ+Q CNFFVWED  N+SSGG      T    +                     
Sbjct: 816  GRKFYSCQSQECNFFVWEDSLNSSSGGRSAQPATARSSASNPSRRGGRGRGDRGRGRQSG 875

Query: 312  XXXXXXSFMSATGEPISG-RCFVCGDPGHFANACPNRG 202
                  +F+SATG+P+SG RCFVCGDP HFAN CPNRG
Sbjct: 876  ARTSDTTFVSATGDPVSGRRCFVCGDPSHFANVCPNRG 913


>ref|XP_004289288.1| PREDICTED: DNA topoisomerase 3-alpha-like [Fragaria vesca subsp.
            vesca]
          Length = 908

 Score =  981 bits (2537), Expect = 0.0
 Identities = 479/693 (69%), Positives = 536/693 (77%), Gaps = 34/693 (4%)
 Frame = -1

Query: 2178 QFPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCV 1999
            QFPTLGFIVER+WE+QSHEPEEFWTINC+H S+EGTATF WMRGHLFD+ CA IIYEMCV
Sbjct: 218  QFPTLGFIVERYWEIQSHEPEEFWTINCSHRSDEGTATFGWMRGHLFDHACAVIIYEMCV 277

Query: 1998 QEPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMKT-------------- 1861
            ++P ATVT VRQQEK KYPP+PL+TIELEKRASRYFRMSSEHTMK               
Sbjct: 278  EDPIATVTKVRQQEKPKYPPYPLNTIELEKRASRYFRMSSEHTMKVAEELYQAGFISYPR 337

Query: 1860 --------------IVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTK 1723
                          IVQEQQGHP WGSYAQRLLDP + LWRNP+ GGHDDKAHPPIHPTK
Sbjct: 338  TETDGFSPRTDLHAIVQEQQGHPGWGSYAQRLLDPASGLWRNPSSGGHDDKAHPPIHPTK 397

Query: 1722 FSAGESGWSPDHHKVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYL 1543
            FSAGES WS DH+++YELVVRHFLACVSQPA+GAETTVEIDIAGE FSASGRVI+AKNYL
Sbjct: 398  FSAGESNWSQDHNRLYELVVRHFLACVSQPAVGAETTVEIDIAGEMFSASGRVILAKNYL 457

Query: 1542 DVYRFETWGGSMIPTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATM 1363
            DVYRFE+WGGS++PTY  GQQF PTTLTLD+GVTRPPPLLSEADLL CMDK GIGTDATM
Sbjct: 458  DVYRFESWGGSLLPTYAVGQQFMPTTLTLDSGVTRPPPLLSEADLLGCMDKEGIGTDATM 517

Query: 1362 HDHIKKLLDRFYATKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMG 1183
            HDHIKKLLDRFYATKD++ RFSPT LGEALVMGYDDMGY+LWKPYLRA+ME DMKAVS G
Sbjct: 518  HDHIKKLLDRFYATKDANTRFSPTNLGEALVMGYDDMGYKLWKPYLRAVMERDMKAVSEG 577

Query: 1182 TKRKAEVLEACLQQMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGL 1003
             K KAEVLE CLQQMK CF+DAR NK KLFEAMAVFFERSNR   ++QH  GE +R+CGL
Sbjct: 578  NKSKAEVLETCLQQMKGCFLDARQNKVKLFEAMAVFFERSNRPGGDDQHTSGEFIRRCGL 637

Query: 1002 CQESDMVLRKKPDGNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFK 823
            CQE+DMVLRK  DGNFMVGC+G+PQCRN +WLPGSVSEA+ TTNIC++C+PGPV+LIQF 
Sbjct: 638  CQEADMVLRKNRDGNFMVGCMGYPQCRNAIWLPGSVSEAVATTNICNSCTPGPVHLIQFT 697

Query: 822  FRRLEIPPNYNVNHLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXX 643
            FRRLEIPPNY+ NHLGCIGGCD+ILRQL E+CGTGSR  S+                   
Sbjct: 698  FRRLEIPPNYSTNHLGCIGGCDEILRQLTEICGTGSR--SAARGRGPTTSSNVQQNNTRQ 755

Query: 642  XXXXXAWQTGHSSG---SYANAPESSRGRNSRSQEAGESSIPCSSCGAPCNLRTANTPAN 472
                   Q+GHSSG   S ++ P S R R   +Q +GE S+ C++CGAPC LRTANT  N
Sbjct: 756  GACIYCHQSGHSSGDCPSQSSGPRSVRPRTMNAQ-SGEISVSCTTCGAPCVLRTANTTQN 814

Query: 471  RGRKFYSCQAQGCNFFVWEDNASSG--GTVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXX 298
            RGRKFY C +Q CNFFVWEDN S+G  G   + +                          
Sbjct: 815  RGRKFYKCPSQECNFFVWEDNVSNGNGGRGFQRANVSAGRGAGGRGSGGRGAQGAGHATG 874

Query: 297  XSFMSATGEPISGR-CFVCGDPGHFANACPNRG 202
             +F+SATG+P SGR CFVCGDP HFAN CPNRG
Sbjct: 875  GTFVSATGDPNSGRRCFVCGDPSHFANVCPNRG 907


>ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cicer arietinum]
          Length = 920

 Score =  980 bits (2534), Expect = 0.0
 Identities = 483/701 (68%), Positives = 539/701 (76%), Gaps = 42/701 (5%)
 Frame = -1

Query: 2178 QFPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCV 1999
            QFPTLGF+VER+WE+Q+HEPEEFW+INC+H S+EG A F+W RGHLFDYTCA IIYEMC 
Sbjct: 222  QFPTLGFVVERYWEIQAHEPEEFWSINCSHRSDEGVANFSWGRGHLFDYTCAVIIYEMCT 281

Query: 1998 QEPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMKT-------------- 1861
            +EPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK               
Sbjct: 282  EEPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMKVAEELYQSGFISYPR 341

Query: 1860 --------------IVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTK 1723
                          IVQEQQGHP WG YAQRLLDPEA LWRNP GGGHDDKAHPPIHPTK
Sbjct: 342  TETDNFSSRTDLHAIVQEQQGHPQWGVYAQRLLDPEAGLWRNPRGGGHDDKAHPPIHPTK 401

Query: 1722 FSAGESGWSPDHHKVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYL 1543
            FSAGESGWS DH K+YELVVRHFLACVS+PA+GAETTVEIDIAGE FSA GRVI+ KNYL
Sbjct: 402  FSAGESGWSQDHRKLYELVVRHFLACVSKPAVGAETTVEIDIAGELFSACGRVILEKNYL 461

Query: 1542 DVYRFETWGGSMIPTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATM 1363
            DVY++E+WGGS+IPTY  GQQF PTTLTLD+GVTRPPP LSEADLLSCMDK GIGTDATM
Sbjct: 462  DVYQYESWGGSIIPTYTIGQQFIPTTLTLDSGVTRPPPPLSEADLLSCMDKEGIGTDATM 521

Query: 1362 HDHIKKLLDRFYATKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMG 1183
            HDHIKKLLDRFYATKD+SMRF+PT LGEALVMGYDDMGY+LWKPYLRA+ME DMK+VS G
Sbjct: 522  HDHIKKLLDRFYATKDASMRFTPTNLGEALVMGYDDMGYKLWKPYLRAVMERDMKSVSEG 581

Query: 1182 TKRKAEVLEACLQQMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGL 1003
            TK K EVL+  LQQMKACF+DARLNK KL EAM +FFERSNRS   EQ+AIGEVVR+CGL
Sbjct: 582  TKSKTEVLDTSLQQMKACFLDARLNKVKLLEAMGIFFERSNRSGGEEQNAIGEVVRRCGL 641

Query: 1002 CQESDMVLRKKPDGNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFK 823
            C+ESDMVL+K  DGNFMVGCLGFPQCRN VWLPGSVSEA+VTTN CS C+PGPVY IQFK
Sbjct: 642  CRESDMVLKKSRDGNFMVGCLGFPQCRNAVWLPGSVSEAVVTTNTCSNCTPGPVYRIQFK 701

Query: 822  FRRLEIPPNYNVNHLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXX 643
            FR+LEIPPNY+VNHLGCIGGCD+IL QL E+CGTG R  +                    
Sbjct: 702  FRQLEIPPNYDVNHLGCIGGCDEILTQLTEICGTGPRMPAR-PRGPTTSTGNAHHTNPRQ 760

Query: 642  XXXXXAWQTGHSSGSYANAPESSRGRNSR------SQEAGESSIPCSSCGAPCNLRTANT 481
                   +TGHSS    +  ++ R RN+R      +Q++GE+S+ C+SCG PC LRTANT
Sbjct: 761  AVCMNCQETGHSSNDCPS--QTLRSRNARQHGNVMNQQSGEASVSCNSCGTPCVLRTANT 818

Query: 480  PANRGRKFYSCQAQGCNFFVWEDNASS---GGTVPRG----SIXXXXXXXXXXXXXXXXX 322
              NRGRKFYSC +Q CNFFVWED+ +S   GG+  R     +                  
Sbjct: 819  ANNRGRKFYSCPSQECNFFVWEDDLNSGTGGGSFTRSNSIPTSNRGRNGRNGGRGARGRG 878

Query: 321  XXXXXXXXXSFMSATGEPISG-RCFVCGDPGHFANACPNRG 202
                     +F+SATG+PISG RCFVCGDP HFAN CPNRG
Sbjct: 879  RNASSSSNVTFVSATGDPISGRRCFVCGDPSHFANVCPNRG 919


>gb|EOX92637.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao]
          Length = 914

 Score =  979 bits (2532), Expect = 0.0
 Identities = 482/694 (69%), Positives = 529/694 (76%), Gaps = 35/694 (5%)
 Frame = -1

Query: 2178 QFPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCV 1999
            QFPTLGF+VER+WEVQSHEPEEFWTINC+H  +EG ATFNWMRGHLFD+TCA I+YEMCV
Sbjct: 221  QFPTLGFVVERYWEVQSHEPEEFWTINCSHKLDEGVATFNWMRGHLFDHTCAVIVYEMCV 280

Query: 1998 QEPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMKT-------------- 1861
            QEP ATVT VR QEKLKYPP+PLSTIELEKRASRYFRMSSEHTMK               
Sbjct: 281  QEPNATVTKVRHQEKLKYPPYPLSTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPR 340

Query: 1860 --------------IVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTK 1723
                          IVQEQQ HP WGSYAQRLLDP  SLWRNP+ GGHDDKAHPPIHPTK
Sbjct: 341  TETDCFSSRTDLHAIVQEQQDHPEWGSYAQRLLDPGTSLWRNPSSGGHDDKAHPPIHPTK 400

Query: 1722 FSAGESGWSPDHHKVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYL 1543
            FSAGE  WS DH K+YELVVRHFLACVSQPA+GAETTVEIDIA EQFS SGRVI+ +NYL
Sbjct: 401  FSAGEHNWSQDHRKLYELVVRHFLACVSQPAVGAETTVEIDIADEQFSTSGRVILERNYL 460

Query: 1542 DVYRFETWGGSMIPTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATM 1363
            DVYR+E+WGGSMIPTY  GQQF PT+LTLD GVTRPPPLLSEADLLSCMDKAGIGTDATM
Sbjct: 461  DVYRYESWGGSMIPTYTLGQQFIPTSLTLDTGVTRPPPLLSEADLLSCMDKAGIGTDATM 520

Query: 1362 HDHIKKLLDRFYATKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMG 1183
            HDHIKKLLDRFYATKDS+ RFSPTKLGEALVMGYDDMGYELWKP LR+MME DMK VS+G
Sbjct: 521  HDHIKKLLDRFYATKDSNTRFSPTKLGEALVMGYDDMGYELWKPNLRSMMEFDMKEVSVG 580

Query: 1182 TKRKAEVLEACLQQMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGL 1003
             KRK EVL  CLQQMKACF+DARLNK KL EAMAVFFERSN+S  ++ H  GEVVR+CGL
Sbjct: 581  NKRKDEVLATCLQQMKACFLDARLNKVKLLEAMAVFFERSNQSAGDDNHVAGEVVRQCGL 640

Query: 1002 CQESDMVLRKKPDGNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFK 823
            C+ES MVL+K  DGNFMVGCLGFPQCRN +WLPGSV EA VT+NIC +C+PGPVYLIQFK
Sbjct: 641  CRESSMVLKKNRDGNFMVGCLGFPQCRNAIWLPGSVLEAAVTSNICGSCNPGPVYLIQFK 700

Query: 822  FRRLEIPPNYNVNHLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXX 643
            FR+LEIPP +N NHLGCIGGCDDILRQL+E+CGTGSR  S+                   
Sbjct: 701  FRQLEIPPGFNANHLGCIGGCDDILRQLIEICGTGSR-MSARGRGPTTTSSNVQRNSSRQ 759

Query: 642  XXXXXAWQTGHSSGSYANAPESSRGRNSR-SQEAGESSIPCSSCGAPCNLRTANTPANRG 466
                   QTGHSS    +    SR   SR S + GE S+ CS+CG PC LRTANT  NRG
Sbjct: 760  GACLYCQQTGHSSNDCPSQFSGSRNSRSRTSSQNGEPSVSCSTCGTPCVLRTANTANNRG 819

Query: 465  RKFYSCQAQGCNFFVWED---NASSGGTVPRGSI--XXXXXXXXXXXXXXXXXXXXXXXX 301
            RKFYSC +Q CNFF+WED   N + G ++PR  I                          
Sbjct: 820  RKFYSCPSQECNFFIWEDEHNNGTGGRSIPRAGINGSASNSSRGGGRGRGRFGQNGARAA 879

Query: 300  XXSFMSATGEPISG-RCFVCGDPGHFANACPNRG 202
              +F+SATG+PISG RC+VCGDP HFAN CPNRG
Sbjct: 880  DVTFVSATGDPISGRRCYVCGDPSHFANVCPNRG 913


>ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Populus trichocarpa]
            gi|222856496|gb|EEE94043.1| hypothetical protein
            POPTR_0005s06810g [Populus trichocarpa]
          Length = 910

 Score =  965 bits (2494), Expect = 0.0
 Identities = 473/694 (68%), Positives = 533/694 (76%), Gaps = 35/694 (5%)
 Frame = -1

Query: 2178 QFPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCV 1999
            QFPTLGF+VER+WE+QSHEPEEFWTINCTH S+EG A+FNWMRGHLFDYT + I+YEMCV
Sbjct: 217  QFPTLGFVVERYWEIQSHEPEEFWTINCTHRSDEGLASFNWMRGHLFDYTSSVILYEMCV 276

Query: 1998 QEPTATVTNVR-QQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK-------------- 1864
            +EPTATV+N   QQEKLKYPP+PLSTIELEKRASRYFRMSSE TMK              
Sbjct: 277  EEPTATVSNRNHQQEKLKYPPYPLSTIELEKRASRYFRMSSEQTMKVAEDLYQAGFISYP 336

Query: 1863 --------------TIVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPT 1726
                          TIVQE Q HPVWGSYAQRLLDP A LWRNP+ GGHDDKAHPPIHPT
Sbjct: 337  RTETDSFSSRTDLHTIVQEHQEHPVWGSYAQRLLDPGAGLWRNPSNGGHDDKAHPPIHPT 396

Query: 1725 KFSAGESGWSPDHHKVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNY 1546
            KFSAGES WS DHH++YELVVRHFLACVSQPA+GAET VEIDIAGE+FSASGRVI+AKNY
Sbjct: 397  KFSAGESRWSQDHHRLYELVVRHFLACVSQPAVGAETVVEIDIAGERFSASGRVILAKNY 456

Query: 1545 LDVYRFETWGGSMIPTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDAT 1366
            LDVYRFE+WG SMIPTY  GQQF P TLTLD+GVTRPPPLLSEADLLSCMDKAGIGTDAT
Sbjct: 457  LDVYRFESWGDSMIPTYLQGQQFIPATLTLDSGVTRPPPLLSEADLLSCMDKAGIGTDAT 516

Query: 1365 MHDHIKKLLDRFYATKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSM 1186
            MHDHIKKLLDRFY TKD++ RFSPT LGEALVMGYDDMGYELWKP LR++ME DMK VS+
Sbjct: 517  MHDHIKKLLDRFYVTKDANTRFSPTNLGEALVMGYDDMGYELWKPNLRSLMECDMKEVSV 576

Query: 1185 GTKRKAEVLEACLQQMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCG 1006
            G K KAEVL  CLQQMKACF+DA++NK KL EAMA+FF RS+RSN ++  A+GE VR CG
Sbjct: 577  GNKSKAEVLATCLQQMKACFLDAKVNKVKLLEAMAIFFNRSDRSNGDDSSALGENVRPCG 636

Query: 1005 LCQESDMVLRKKPDGNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQF 826
            LCQE++MVL+K  DGNFMVGC GFPQCRN VWLPG V EA +T NIC++C+PGPVYLIQF
Sbjct: 637  LCQEANMVLKKNRDGNFMVGCSGFPQCRNAVWLPGPVLEATITNNICNSCTPGPVYLIQF 696

Query: 825  KFRRLEIPPNYNVNHLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXX 646
            KFR+LEIPP +NVNHLGCIGGCD+ LRQL+E+CGTGSR                      
Sbjct: 697  KFRQLEIPPGFNVNHLGCIGGCDETLRQLIEICGTGSRVQGG-NGPPTTTPSNPQRSNSR 755

Query: 645  XXXXXXAWQTGHSSGSYANAPESSRGRNSR--SQEAGESSIPCSSCGAPCNLRTANTPAN 472
                   +QTGH+S    +   ++R   S   +Q+ GESSIPCS+CG PC LRTANT  N
Sbjct: 756  QAPCIYCYQTGHASTDCPSRISATRHVQSHGMNQQNGESSIPCSTCGTPCVLRTANTANN 815

Query: 471  RGRKFYSCQAQGCNFFVWEDNASSGG---TVPRGSIXXXXXXXXXXXXXXXXXXXXXXXX 301
            RGRKFYSC +Q CNFFVWEDN ++G    + PR ++                        
Sbjct: 816  RGRKFYSCSSQACNFFVWEDNLNNGSAPRSAPRPNMSNSASNPSRRGGRGRGVQNAGRAA 875

Query: 300  XXSFMSATGEPISG-RCFVCGDPGHFANACPNRG 202
              +F+SATGEPISG RCFVCGDP HFANACP+RG
Sbjct: 876  DVTFVSATGEPISGRRCFVCGDPSHFANACPSRG 909


>ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cucumis sativus]
          Length = 925

 Score =  945 bits (2443), Expect = 0.0
 Identities = 467/708 (65%), Positives = 530/708 (74%), Gaps = 49/708 (6%)
 Frame = -1

Query: 2178 QFPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCV 1999
            QFPTLGF+VER+WE+QSHEPEEFWTINC+HNS++G +TF+W RG+LFDYTCA + YEMCV
Sbjct: 223  QFPTLGFVVERYWEIQSHEPEEFWTINCSHNSDDGISTFSWTRGNLFDYTCAVVFYEMCV 282

Query: 1998 QEPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMKT-------------- 1861
            QE TATV NVR+QE LKYPPHPL+TIELEKRASRYFRMSSEHTMK               
Sbjct: 283  QESTATVVNVRRQETLKYPPHPLNTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPR 342

Query: 1860 --------------IVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTK 1723
                          IV+EQQ H +WG+YAQRLLDPE+ LWRNP+GGGHDDKAHPPIHPTK
Sbjct: 343  TETDCFSQRTDLHGIVREQQEHQIWGAYAQRLLDPESRLWRNPSGGGHDDKAHPPIHPTK 402

Query: 1722 FSAGESGWSPDHHKVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRV-IIAKNY 1546
            FSAGE GWS DHH++YELVVRHFLACVSQPA+GA TTVEIDIAGE FS S R   I +NY
Sbjct: 403  FSAGERGWSQDHHRLYELVVRHFLACVSQPAVGAVTTVEIDIAGELFSTSKRANSILRNY 462

Query: 1545 LDVYRFETWGGSMIPTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDAT 1366
            LDVYRFE+WGGS IPTY  GQQF PTTLTLD+GVTRPPPLLSEADLLSCMDK GIGTDAT
Sbjct: 463  LDVYRFESWGGSTIPTYVSGQQFVPTTLTLDSGVTRPPPLLSEADLLSCMDKEGIGTDAT 522

Query: 1365 MHDHIKKLLDRFYATKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSM 1186
            MHDHIKKLLDRFYATKD++ RF+PT LGEALVMGYDDMGY LWKP LRA+ME +MKAVS 
Sbjct: 523  MHDHIKKLLDRFYATKDANTRFTPTNLGEALVMGYDDMGYNLWKPNLRAIMEHEMKAVSE 582

Query: 1185 GTKRKAEVLEACLQQMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCG 1006
            GTKRK EVL +CLQQMK CF+DAR+NK KL EAM VFFERSN S  +E  A+GEVV+ CG
Sbjct: 583  GTKRKDEVLASCLQQMKTCFLDARVNKQKLLEAMEVFFERSNGSGGDENRAVGEVVQLCG 642

Query: 1005 LCQESDMVLRKKPDGNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQF 826
            LCQ+SDMVL++  DGN+MVGCLGFPQCRNVVWLPGS++EA VT++ C+ C+PGPVYLIQF
Sbjct: 643  LCQDSDMVLKRNRDGNYMVGCLGFPQCRNVVWLPGSIAEATVTSDRCTLCTPGPVYLIQF 702

Query: 825  KFRRLEIPPNYNVNHLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXX 646
            KFR+LEIPPNYN NHLGC+GGCDDILRQL E+CGTGSR ++                   
Sbjct: 703  KFRQLEIPPNYNANHLGCVGGCDDILRQLTEICGTGSRVSA---RGRGTSSSNVQRDNPG 759

Query: 645  XXXXXXAWQTGHSSGSYANAPESSRG-RNSRSQEAGESSIPCSSCGAPCNLRTANTPANR 469
                    Q GHSS    + P  S G R+++ +++GESS+ CSSCG+PC LRTANT  NR
Sbjct: 760  QSVCIFCQQVGHSSN---DCPSQSVGSRSAQRRQSGESSVSCSSCGSPCVLRTANTANNR 816

Query: 468  GRKFYSCQAQGCNFFVWEDNASSG--------------GTVPR----GSIXXXXXXXXXX 343
            GRKFY CQ+Q CNFFVWEDN  +G              G+ P     G            
Sbjct: 817  GRKFYKCQSQECNFFVWEDNVDNGNGGNSVQRSNVRSSGSAPSNLNPGQNTGRGRGRGRG 876

Query: 342  XXXXXXXXXXXXXXXXSFMSATGEPISG-RCFVCGDPGHFANACPNRG 202
                            +F+SATGEPIS  RCFVCGDP HFAN CPNRG
Sbjct: 877  RGRDRDRDRGQGQIAATFVSATGEPISDRRCFVCGDPSHFANVCPNRG 924


>ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [Citrus sinensis]
          Length = 940

 Score =  944 bits (2441), Expect = 0.0
 Identities = 467/691 (67%), Positives = 524/691 (75%), Gaps = 32/691 (4%)
 Frame = -1

Query: 2178 QFPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCV 1999
            QFPTLGF+VER+WE+Q+HE EEFWTINC+H SEEGTATF+WMRGHLFDYT A IIYEMCV
Sbjct: 253  QFPTLGFVVERYWEIQAHESEEFWTINCSHKSEEGTATFSWMRGHLFDYTSAVIIYEMCV 312

Query: 1998 QEPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMKT-------------- 1861
            QEPTATVT VRQQEKLKYPP+PLSTIELEKRASRYFRMSSEHTMK               
Sbjct: 313  QEPTATVTKVRQQEKLKYPPYPLSTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPR 372

Query: 1860 --------------IVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTK 1723
                          IVQEQ GHP WG YAQRLLD  A LWRNP  GGHDDKAHPPIHPTK
Sbjct: 373  TETDSFSSGTNLHGIVQEQIGHPDWGPYAQRLLDHAAGLWRNPGSGGHDDKAHPPIHPTK 432

Query: 1722 FSAGESGWSPDHHKVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYL 1543
            FS+GES WS DH+K+YELVVRHFLACVSQPA+GAET VEI+IAGE FS SGRVI+AKNYL
Sbjct: 433  FSSGESRWSQDHYKLYELVVRHFLACVSQPAVGAETIVEINIAGEVFSTSGRVILAKNYL 492

Query: 1542 DVYRFETWGGSMIPTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATM 1363
            DVYRFE+WGG +IPTY +GQQF PTTLTLD+GVTRPPPLLSEADLLSCMDKAGIGTDATM
Sbjct: 493  DVYRFESWGGLVIPTYVHGQQFIPTTLTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATM 552

Query: 1362 HDHIKKLLDRFYATKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMG 1183
            HDHIKKLLDRFYA KD++ RF+PT +GEALVMGYDDMGYELWKP LR+MMESDMK VS+G
Sbjct: 553  HDHIKKLLDRFYAIKDANTRFAPTNIGEALVMGYDDMGYELWKPNLRSMMESDMKEVSVG 612

Query: 1182 TKRKAEVLEACLQQMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGL 1003
             K KA+VL  CLQQMKACF+DARL K KL EAM +FFE   RS   +Q A GEVVR+CG+
Sbjct: 613  NKSKADVLANCLQQMKACFLDARLKKVKLLEAMGIFFE---RSGGEDQQAAGEVVRQCGI 669

Query: 1002 CQESDMVLRKKPDGNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFK 823
            CQES+MVL+K  DGN MVGCL FPQCRN VWLPGSVSEA VTTN C++C+PGPVYLIQFK
Sbjct: 670  CQESNMVLKKSRDGNLMVGCLAFPQCRNAVWLPGSVSEAAVTTNTCNSCTPGPVYLIQFK 729

Query: 822  FRRLEIPPNYNVNHLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXX 643
            FR+ EIPP +NVNHLGCIGGCD+ LRQL+E+CGTGSR  +                    
Sbjct: 730  FRQHEIPPGFNVNHLGCIGGCDETLRQLIEICGTGSRIPAR-GRGPTASSNNGQQSNHRQ 788

Query: 642  XXXXXAWQTGHSSGSYANAPESSRG--RNSRSQEAGESSIPCSSCGAPCNLRTANTPANR 469
                   Q GHSS    +    SR    N  + ++GESSI C++CG PC LRTANT  NR
Sbjct: 789  RACIYCQQMGHSSSDCPSQFSGSRNARANGMNPQSGESSIQCTTCGTPCVLRTANTANNR 848

Query: 468  GRKFYSCQAQGCNFFVWEDNASSG-GTVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXS 292
            GRKFYSC +Q CNFFVWED+A +G   +P+  +                          +
Sbjct: 849  GRKFYSCSSQECNFFVWEDDAKNGTRRMPQAGVSGSASNPSQRGGRGRGGQSRGHNTGMT 908

Query: 291  FMSATGEPISG-RCFVCGDPGHFANACPNRG 202
            F+SATG+PISG RC+VCG+P HFANACPNRG
Sbjct: 909  FVSATGDPISGRRCYVCGEPSHFANACPNRG 939


>gb|EOX92638.1| Topoisomerase 3alpha isoform 2, partial [Theobroma cacao]
          Length = 845

 Score =  933 bits (2411), Expect = 0.0
 Identities = 452/626 (72%), Positives = 494/626 (78%), Gaps = 32/626 (5%)
 Frame = -1

Query: 2178 QFPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCV 1999
            QFPTLGF+VER+WEVQSHEPEEFWTINC+H  +EG ATFNWMRGHLFD+TCA I+YEMCV
Sbjct: 221  QFPTLGFVVERYWEVQSHEPEEFWTINCSHKLDEGVATFNWMRGHLFDHTCAVIVYEMCV 280

Query: 1998 QEPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMKT-------------- 1861
            QEP ATVT VR QEKLKYPP+PLSTIELEKRASRYFRMSSEHTMK               
Sbjct: 281  QEPNATVTKVRHQEKLKYPPYPLSTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPR 340

Query: 1860 --------------IVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTK 1723
                          IVQEQQ HP WGSYAQRLLDP  SLWRNP+ GGHDDKAHPPIHPTK
Sbjct: 341  TETDCFSSRTDLHAIVQEQQDHPEWGSYAQRLLDPGTSLWRNPSSGGHDDKAHPPIHPTK 400

Query: 1722 FSAGESGWSPDHHKVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYL 1543
            FSAGE  WS DH K+YELVVRHFLACVSQPA+GAETTVEIDIA EQFS SGRVI+ +NYL
Sbjct: 401  FSAGEHNWSQDHRKLYELVVRHFLACVSQPAVGAETTVEIDIADEQFSTSGRVILERNYL 460

Query: 1542 DVYRFETWGGSMIPTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATM 1363
            DVYR+E+WGGSMIPTY  GQQF PT+LTLD GVTRPPPLLSEADLLSCMDKAGIGTDATM
Sbjct: 461  DVYRYESWGGSMIPTYTLGQQFIPTSLTLDTGVTRPPPLLSEADLLSCMDKAGIGTDATM 520

Query: 1362 HDHIKKLLDRFYATKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMG 1183
            HDHIKKLLDRFYATKDS+ RFSPTKLGEALVMGYDDMGYELWKP LR+MME DMK VS+G
Sbjct: 521  HDHIKKLLDRFYATKDSNTRFSPTKLGEALVMGYDDMGYELWKPNLRSMMEFDMKEVSVG 580

Query: 1182 TKRKAEVLEACLQQMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGL 1003
             KRK EVL  CLQQMKACF+DARLNK KL EAMAVFFERSN+S  ++ H  GEVVR+CGL
Sbjct: 581  NKRKDEVLATCLQQMKACFLDARLNKVKLLEAMAVFFERSNQSAGDDNHVAGEVVRQCGL 640

Query: 1002 CQESDMVLRKKPDGNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFK 823
            C+ES MVL+K  DGNFMVGCLGFPQCRN +WLPGSV EA VT+NIC +C+PGPVYLIQFK
Sbjct: 641  CRESSMVLKKNRDGNFMVGCLGFPQCRNAIWLPGSVLEAAVTSNICGSCNPGPVYLIQFK 700

Query: 822  FRRLEIPPNYNVNHLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXX 643
            FR+LEIPP +N NHLGCIGGCDDILRQL+E+CGTGSR  S+                   
Sbjct: 701  FRQLEIPPGFNANHLGCIGGCDDILRQLIEICGTGSR-MSARGRGPTTTSSNVQRNSSRQ 759

Query: 642  XXXXXAWQTGHSSGSYANAPESSRGRNSRSQE----AGESSIPCSSCGAPCNLRTANTPA 475
                   QTGHSS    +    SR   SR+       GE S+ CS+CG PC LRTANT  
Sbjct: 760  GACLYCQQTGHSSNDCPSQFSGSRNSRSRTSSQNGMQGEPSVSCSTCGTPCVLRTANTAN 819

Query: 474  NRGRKFYSCQAQGCNFFVWEDNASSG 397
            NRGRKFYSC +Q CNFF+WED  ++G
Sbjct: 820  NRGRKFYSCPSQECNFFIWEDEHNNG 845


>ref|XP_006581778.1| PREDICTED: DNA topoisomerase 3-alpha isoform X4 [Glycine max]
          Length = 885

 Score =  924 bits (2389), Expect = 0.0
 Identities = 460/673 (68%), Positives = 520/673 (77%), Gaps = 14/673 (2%)
 Frame = -1

Query: 2178 QFPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCV 1999
            QFPTLGF+VERFWE+Q+HEPEEFW+I C+H S+EGTA F+WMRG LFDYTCA IIYEMCV
Sbjct: 218  QFPTLGFVVERFWEIQAHEPEEFWSIICSHESKEGTAEFSWMRGRLFDYTCAVIIYEMCV 277

Query: 1998 QEPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMKTIVQEQQGHPVWGSY 1819
            +EPTATVTN+RQQEK KYPP PL+TIEL+KRASRYFRMSS+HTMKTIVQEQQGHP WG Y
Sbjct: 278  EEPTATVTNIRQQEKPKYPPFPLNTIELQKRASRYFRMSSDHTMKTIVQEQQGHPEWGIY 337

Query: 1818 AQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHHKVYELVVRHFLACVS 1639
            AQRL+DPEA LWRNP GGGHDDKAHPPI+PTKFS GESGWS DH K+YELVVRHFLACVS
Sbjct: 338  AQRLMDPEAGLWRNPRGGGHDDKAHPPIYPTKFSTGESGWSQDHRKLYELVVRHFLACVS 397

Query: 1638 QPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMIPTYNYGQQFTPTTLT 1459
            +PA+GAETTVEI+IAGE FSA GRVI+ KNYLDVYR+E+WGGSMIPTY  GQQF PT LT
Sbjct: 398  KPALGAETTVEINIAGELFSACGRVILEKNYLDVYRYESWGGSMIPTYTNGQQFNPTKLT 457

Query: 1458 LDAGVTRPPPLLSEADLLSCMDK--AGIGTDATMHDHIKKLLDRFYATKDSSMRFSPTKL 1285
            L++GVTRPPPLLSEADLLS MD+  A IGTDATM DHIKK+LDR YATKDSS RF+PT L
Sbjct: 458  LESGVTRPPPLLSEADLLSYMDREEAKIGTDATMQDHIKKMLDRSYATKDSSTRFTPTNL 517

Query: 1284 GEALVMGYD--DMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQMKACFVDARL 1111
            GEALV+GYD  DM Y+LWKP LR+ ME  M  V  G K KAEVL   LQ+M+ACF++ARL
Sbjct: 518  GEALVLGYDDIDMTYKLWKPDLRSEMEKKMDDVKKGDKSKAEVLVTILQKMEACFLEARL 577

Query: 1110 NKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDGNFMVGCLGFP 931
            NK KL EAMA+FFERS RS+S+E HA GEVVR+CGLCQESDM+LRK  DGNFMVGC+G+P
Sbjct: 578  NKVKLLEAMAIFFERSTRSSSDELHATGEVVRRCGLCQESDMLLRKNRDGNFMVGCMGYP 637

Query: 930  QCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNHLGCIGGCDDI 751
            QCRN VWLPGSVSEA+VTTN C+ C+PGPVYLIQFKFRRLEIPPNY+ NHLGCIGGCD+I
Sbjct: 638  QCRNAVWLPGSVSEAVVTTNTCNFCTPGPVYLIQFKFRRLEIPPNYSPNHLGCIGGCDEI 697

Query: 750  LRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQTGHSSGS----YANAP 583
            L QL E+CG G R  +                           +TGHSS      Y N  
Sbjct: 698  LAQLTEICGRGPRMPARPRGPTAPTSNAHHTNPRQGACMNCR-ETGHSSTDCPLRYGNVQ 756

Query: 582  ESSRGRNSRSQEAGESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQGCNFFVWED--N 409
                  +  S+  GE+S+ CSSCG PC LRTANT  NRGRKFYSCQ+Q CNFFVWED  N
Sbjct: 757  -----HHGTSEHNGEASVSCSSCGTPCVLRTANTVNNRGRKFYSCQSQECNFFVWEDSLN 811

Query: 408  ASSGG-TVPRGSI--XXXXXXXXXXXXXXXXXXXXXXXXXXSFMSATGEPISG-RCFVCG 241
            A +GG +V R +                             +FMSATG+PISG RC+ CG
Sbjct: 812  AGTGGRSVTRSNSIPALNPRQTGGRGSRGRGGQYGSRTANTTFMSATGDPISGRRCYTCG 871

Query: 240  DPGHFANACPNRG 202
            DP HFAN CP+RG
Sbjct: 872  DPSHFANVCPHRG 884


>ref|XP_003526873.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Glycine max]
            gi|571460704|ref|XP_006581776.1| PREDICTED: DNA
            topoisomerase 3-alpha isoform X2 [Glycine max]
          Length = 913

 Score =  909 bits (2350), Expect = 0.0
 Identities = 460/701 (65%), Positives = 520/701 (74%), Gaps = 42/701 (5%)
 Frame = -1

Query: 2178 QFPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCV 1999
            QFPTLGF+VERFWE+Q+HEPEEFW+I C+H S+EGTA F+WMRG LFDYTCA IIYEMCV
Sbjct: 218  QFPTLGFVVERFWEIQAHEPEEFWSIICSHESKEGTAEFSWMRGRLFDYTCAVIIYEMCV 277

Query: 1998 QEPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK--------------- 1864
            +EPTATVTN+RQQEK KYPP PL+TIEL+KRASRYFRMSS+HTMK               
Sbjct: 278  EEPTATVTNIRQQEKPKYPPFPLNTIELQKRASRYFRMSSDHTMKVAEELYQAGFISYPR 337

Query: 1863 -------------TIVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTK 1723
                         TIVQEQQGHP WG YAQRL+DPEA LWRNP GGGHDDKAHPPI+PTK
Sbjct: 338  TETDSFSPGTDLHTIVQEQQGHPEWGIYAQRLMDPEAGLWRNPRGGGHDDKAHPPIYPTK 397

Query: 1722 FSAGESGWSPDHHKVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYL 1543
            FS GESGWS DH K+YELVVRHFLACVS+PA+GAETTVEI+IAGE FSA GRVI+ KNYL
Sbjct: 398  FSTGESGWSQDHRKLYELVVRHFLACVSKPALGAETTVEINIAGELFSACGRVILEKNYL 457

Query: 1542 DVYRFETWGGSMIPTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDK--AGIGTDA 1369
            DVYR+E+WGGSMIPTY  GQQF PT LTL++GVTRPPPLLSEADLLS MD+  A IGTDA
Sbjct: 458  DVYRYESWGGSMIPTYTNGQQFNPTKLTLESGVTRPPPLLSEADLLSYMDREEAKIGTDA 517

Query: 1368 TMHDHIKKLLDRFYATKDSSMRFSPTKLGEALVMGYDD--MGYELWKPYLRAMMESDMKA 1195
            TM DHIKK+LDR YATKDSS RF+PT LGEALV+GYDD  M Y+LWKP LR+ ME  M  
Sbjct: 518  TMQDHIKKMLDRSYATKDSSTRFTPTNLGEALVLGYDDIDMTYKLWKPDLRSEMEKKMDD 577

Query: 1194 VSMGTKRKAEVLEACLQQMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVR 1015
            V  G K KAEVL   LQ+M+ACF++ARLNK KL EAMA+FFERS RS+S+E HA GEVVR
Sbjct: 578  VKKGDKSKAEVLVTILQKMEACFLEARLNKVKLLEAMAIFFERSTRSSSDELHATGEVVR 637

Query: 1014 KCGLCQESDMVLRKKPDGNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYL 835
            +CGLCQESDM+LRK  DGNFMVGC+G+PQCRN VWLPGSVSEA+VTTN C+ C+PGPVYL
Sbjct: 638  RCGLCQESDMLLRKNRDGNFMVGCMGYPQCRNAVWLPGSVSEAVVTTNTCNFCTPGPVYL 697

Query: 834  IQFKFRRLEIPPNYNVNHLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXX 655
            IQFKFRRLEIPPNY+ NHLGCIGGCD+IL QL E+CG G R  +                
Sbjct: 698  IQFKFRRLEIPPNYSPNHLGCIGGCDEILAQLTEICGRGPRMPARPRGPTAPTSNAHHTN 757

Query: 654  XXXXXXXXXAWQTGHSSGS----YANAPESSRGRNSRSQEAGESSIPCSSCGAPCNLRTA 487
                       +TGHSS      Y N        +  S+  GE+S+ CSSCG PC LRTA
Sbjct: 758  PRQGACMNCR-ETGHSSTDCPLRYGNVQ-----HHGTSEHNGEASVSCSSCGTPCVLRTA 811

Query: 486  NTPANRGRKFYSCQAQGCNFFVWED--NASSGG-TVPRGSI--XXXXXXXXXXXXXXXXX 322
            NT  NRGRKFYSCQ+Q CNFFVWED  NA +GG +V R +                    
Sbjct: 812  NTVNNRGRKFYSCQSQECNFFVWEDSLNAGTGGRSVTRSNSIPALNPRQTGGRGSRGRGG 871

Query: 321  XXXXXXXXXSFMSATGEPISG-RCFVCGDPGHFANACPNRG 202
                     +FMSATG+PISG RC+ CGDP HFAN CP+RG
Sbjct: 872  QYGSRTANTTFMSATGDPISGRRCYTCGDPSHFANVCPHRG 912


>ref|XP_006649448.1| PREDICTED: DNA topoisomerase 3-alpha-like [Oryza brachyantha]
          Length = 923

 Score =  906 bits (2342), Expect = 0.0
 Identities = 442/703 (62%), Positives = 516/703 (73%), Gaps = 43/703 (6%)
 Frame = -1

Query: 2178 QFPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCV 1999
            QFPTLGFIVERFWE+Q+HEPEEFWTINC+H S+EGTA+F W+RGHLFDY+ A +IYEMCV
Sbjct: 227  QFPTLGFIVERFWEIQAHEPEEFWTINCSHTSDEGTASFGWIRGHLFDYSSAVVIYEMCV 286

Query: 1998 QEPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK--------------- 1864
            +EP ATV NVR QEKLKYPP+PLSTIEL+KRASRYFRMSSEHTMK               
Sbjct: 287  EEPMATVQNVRNQEKLKYPPYPLSTIELQKRASRYFRMSSEHTMKVAEELYQAGFISYPR 346

Query: 1863 -------------TIVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTK 1723
                         +IVQEQ  HPVWG+YAQRLLDPEA LWRNP+ GGHDDKAHPPIHPTK
Sbjct: 347  TETDNFSPNTDLHSIVQEQTAHPVWGTYAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTK 406

Query: 1722 FSAGESGWSPDHHKVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYL 1543
            FSAGE+ WS +H K+YELVVRHFLAC SQPA+GAETTVEIDIAGEQF+ASGRV+++KNYL
Sbjct: 407  FSAGETNWSDNHKKLYELVVRHFLACCSQPAVGAETTVEIDIAGEQFNASGRVVLSKNYL 466

Query: 1542 DVYRFETWGGSMIPTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATM 1363
            DVYRF++WGG+++PTY  GQQF PTTLTLD+GVTRPPPLL+EADLLSCMDKAGIGTDATM
Sbjct: 467  DVYRFDSWGGTLLPTYTIGQQFIPTTLTLDSGVTRPPPLLAEADLLSCMDKAGIGTDATM 526

Query: 1362 HDHIKKLLDRFYATKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMG 1183
            HDHIKKLLDR YATKD++ RFSPT LGEALVMGYD+MGYELWKPYLR+MME+DMK+VS+G
Sbjct: 527  HDHIKKLLDRCYATKDANTRFSPTNLGEALVMGYDEMGYELWKPYLRSMMEADMKSVSIG 586

Query: 1182 TKRKAEVLEACLQQMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGL 1003
            TK KAEVLE CLQQMKACF+DAR NK KLF+AM  FF RS+R  +  Q++I E VR C  
Sbjct: 587  TKSKAEVLENCLQQMKACFLDARANKVKLFDAMGAFFARSSRPINETQNSI-EAVRPCAA 645

Query: 1002 CQESDMVLRKKPDGNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFK 823
            C ES+MVL+++P G FMVGC GFPQCRNVVWLPGS+SEA VT  +C TC+PGPVY IQFK
Sbjct: 646  CNESEMVLKRRPTGEFMVGCRGFPQCRNVVWLPGSLSEASVTDQVCPTCAPGPVYKIQFK 705

Query: 822  FRRLEIPPNYNVNHLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXX 643
            FRR +IPP+++V+HLGCIGGCDDIL++L E+   GS N ++                   
Sbjct: 706  FRRRDIPPSFDVDHLGCIGGCDDILKELTEISRFGSHNQTATPARNQSQNPSGARQGAPR 765

Query: 642  XXXXXAWQ------TGHSSGSYANAPESSRGRNSRSQEAGESSIPCSSCGAPCNLRTANT 481
                  ++       GH+       P+  R  ++ S       + C+SCG PC LRTANT
Sbjct: 766  QDLHTDFRPARQFTNGHTP---VVNPQGFRSTHTGSSGNASGQVQCTSCGEPCILRTANT 822

Query: 480  PANRGRKFYSCQAQGCNFFVWEDNASSGGTVPRG---------SIXXXXXXXXXXXXXXX 328
             ANRGRKFY CQ   C FF WED+  +  +VPRG                          
Sbjct: 823  EANRGRKFYKCQDPACGFFAWEDDVQN--SVPRGRGRGGRSGSRQASASAGRRGGSQARG 880

Query: 327  XXXXXXXXXXXSFMSATGEPISGRCFVCGDPGHFANACPNRGR 199
                        F++ATGEP+ G CFVCGDP HFANACP+RGR
Sbjct: 881  RRGRGRNADGMMFVAATGEPVHGSCFVCGDPTHFANACPSRGR 923


>ref|NP_201197.1| topoisomerase 3alpha [Arabidopsis thaliana]
            gi|8777305|dbj|BAA96895.1| DNA topoisomerase III
            [Arabidopsis thaliana] gi|169218912|gb|ACA50279.1|
            topoisomerase 3 alpha [Arabidopsis thaliana]
            gi|332010433|gb|AED97816.1| topoisomerase 3alpha
            [Arabidopsis thaliana]
          Length = 926

 Score =  905 bits (2340), Expect = 0.0
 Identities = 446/703 (63%), Positives = 512/703 (72%), Gaps = 45/703 (6%)
 Frame = -1

Query: 2178 QFPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCV 1999
            QFPTLGFIVER+WE+Q+HEPEEFWTINC+H SEEG ATFNWMRGHLFDY  A I+YEMCV
Sbjct: 224  QFPTLGFIVERYWEIQAHEPEEFWTINCSHQSEEGLATFNWMRGHLFDYASAVILYEMCV 283

Query: 1998 QEPTATVTNV-RQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMKT------------- 1861
            +EPTATV NV   +E+ KYPP+PL+TIELEKRASRYFR+SSEHTMK              
Sbjct: 284  EEPTATVMNVPHPRERFKYPPYPLNTIELEKRASRYFRLSSEHTMKVAEELYQAGFISYP 343

Query: 1860 ---------------IVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPT 1726
                           +V+EQ  HP WGSYAQRLL+PE  LWRNP  GGHDDKAHPPIHPT
Sbjct: 344  RTETDSFSSRTDLRAMVEEQTRHPAWGSYAQRLLEPEGGLWRNPANGGHDDKAHPPIHPT 403

Query: 1725 KFSAGESGWSPDHHKVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNY 1546
            KFS+GES WS DH  VYELVVRH+LACVSQPA+ AETTVEIDIAGE+FSASGR I+AKNY
Sbjct: 404  KFSSGESNWSRDHLNVYELVVRHYLACVSQPAVAAETTVEIDIAGERFSASGRAILAKNY 463

Query: 1545 LDVYRFETWGGSMIPTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDAT 1366
            L+VYRFE+WGGS+IP Y  GQQF PTTLTLDA VTRPPPLL EADLLSCMDKAGIGTDAT
Sbjct: 464  LEVYRFESWGGSVIPVYEKGQQFIPTTLTLDAAVTRPPPLLCEADLLSCMDKAGIGTDAT 523

Query: 1365 MHDHIKKLLDRFYATKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSM 1186
            MHDHIKKLLDR YATKD++ RFSPT LGEALVMGYDDMGYELWKP LRA+ME DM  VS+
Sbjct: 524  MHDHIKKLLDRGYATKDANTRFSPTNLGEALVMGYDDMGYELWKPNLRALMEHDMNEVSV 583

Query: 1185 GTKRKAEVLEACLQQMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCG 1006
            G K KAEVLE CLQQMKACF+DAR+ K KL EAM +FFERSN ++ +E    GEVVR+C 
Sbjct: 584  GRKTKAEVLETCLQQMKACFLDARVKKSKLLEAMTIFFERSNNTDESESQTAGEVVRRCN 643

Query: 1005 LCQESDMVLRKKPDGNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQF 826
            LC ESDM LRK  DGNFMVGC+ +PQCRN VWLPG   EA VTTN+C +C PGPVY I F
Sbjct: 644  LCNESDMALRKNRDGNFMVGCMNYPQCRNAVWLPGPTLEASVTTNVCQSCGPGPVYKILF 703

Query: 825  KFRRLEIPPNYNVNHLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXX 646
            KFR++ IPP ++VNHLGC+GGCDDIL+QL+++CGTGSR+ +                   
Sbjct: 704  KFRQIGIPPGFDVNHLGCVGGCDDILKQLIDICGTGSRSQARRTPGTAPSNNIQGSNTRQ 763

Query: 645  XXXXXXAWQTGHSSGSYANAPESSRGRNSRSQEAG----ESSIPCSSCGAPCNLRTANTP 478
                    Q GH+S +  +   +SR  NSR         ES++ C++CG+ C LRTANT 
Sbjct: 764  SNVCIHCQQRGHASTNCPSRVPASR--NSRPTATNPRNDESTVSCNTCGSQCVLRTANTE 821

Query: 477  ANRGRKFYSCQAQGCNFFVWEDN-----------ASSGGTVPRGSIXXXXXXXXXXXXXX 331
            ANRGR+F+SC  QGC+FF WED+           ++SGG+  RGS               
Sbjct: 822  ANRGRQFFSCPTQGCSFFAWEDSINNSSGNATTGSNSGGSGRRGS------RGRGRGGRG 875

Query: 330  XXXXXXXXXXXXSFMSATGEPISG-RCFVCGDPGHFANACPNR 205
                        SF+SATGEP+SG RCF CGDP HFANACPNR
Sbjct: 876  GQSSGGRRGSGTSFVSATGEPVSGIRCFSCGDPSHFANACPNR 918


>ref|XP_002864876.1| hypothetical protein ARALYDRAFT_496584 [Arabidopsis lyrata subsp.
            lyrata] gi|297310711|gb|EFH41135.1| hypothetical protein
            ARALYDRAFT_496584 [Arabidopsis lyrata subsp. lyrata]
          Length = 923

 Score =  904 bits (2335), Expect = 0.0
 Identities = 444/695 (63%), Positives = 506/695 (72%), Gaps = 37/695 (5%)
 Frame = -1

Query: 2178 QFPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCV 1999
            QFPTLGFIVER+WE+Q+HEPEEFWTINC+H SEEG ATFNWMRGHLFDY  A I+YEMCV
Sbjct: 224  QFPTLGFIVERYWEIQAHEPEEFWTINCSHQSEEGLATFNWMRGHLFDYASAVILYEMCV 283

Query: 1998 QEPTATVTNV-RQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMKT------------- 1861
            +EPTATV NV   +E+ KYPP+PL+TIELEKRASRYFR+SSEHTMK              
Sbjct: 284  EEPTATVMNVPHPRERFKYPPYPLNTIELEKRASRYFRLSSEHTMKVAEELYQAGFISYP 343

Query: 1860 ---------------IVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPT 1726
                           +V+EQ+ HP WGSYAQRLL+PE  LWRNP  GGHDDKAHPPIHPT
Sbjct: 344  RTETDSFSSRTDLCAMVEEQRRHPAWGSYAQRLLEPEGGLWRNPGNGGHDDKAHPPIHPT 403

Query: 1725 KFSAGESGWSPDHHKVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNY 1546
            KFS+GES WS DH  VYELVVRH+LACVSQPA  AETTVEIDIAGE+FSASGR I+AKNY
Sbjct: 404  KFSSGESNWSRDHLNVYELVVRHYLACVSQPAKAAETTVEIDIAGERFSASGRAILAKNY 463

Query: 1545 LDVYRFETWGGSMIPTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDAT 1366
            L+VYRFE+WGGS+IP Y  GQQF PTTLTLD+ VTRPPPLL EADLLSCMDKAGIGTDAT
Sbjct: 464  LEVYRFESWGGSVIPVYEKGQQFIPTTLTLDSAVTRPPPLLCEADLLSCMDKAGIGTDAT 523

Query: 1365 MHDHIKKLLDRFYATKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSM 1186
            MHDHIKKLLDR YATKD++ RFSPT LGEALVMGYDDMGYELWKP LRA+ME DM  VS+
Sbjct: 524  MHDHIKKLLDRGYATKDANTRFSPTNLGEALVMGYDDMGYELWKPNLRALMERDMNEVSV 583

Query: 1185 GTKRKAEVLEACLQQMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCG 1006
            G K KAEVLE CLQQMKACF+DAR+ K KL EAM +FFERSN ++ +E    GEV+R+C 
Sbjct: 584  GRKTKAEVLETCLQQMKACFLDARVKKSKLLEAMTIFFERSNNTDESESQTAGEVIRRCN 643

Query: 1005 LCQESDMVLRKKPDGNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQF 826
            LC ESDM LRK  DGNFMVGC+ +PQCRN VWLPG   EA VTT++C TC PGPVY I F
Sbjct: 644  LCNESDMALRKNRDGNFMVGCMNYPQCRNAVWLPGPTLEASVTTDVCQTCGPGPVYKILF 703

Query: 825  KFRRLEIPPNYNVNHLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXX 646
            KFR++ IPP ++VNHLGCIGGCDDIL+QL+++CGTGSR+ +                   
Sbjct: 704  KFRQIGIPPGFDVNHLGCIGGCDDILKQLIDICGTGSRSQARRAPGTVPSNNIQGSNTRQ 763

Query: 645  XXXXXXAWQTGHSSGSYANAPESSRG-RNSR----SQEAGESSIPCSSCGAPCNLRTANT 481
                    Q GH+S   AN P  +   RNSR    +    ES++ C++CG  C LRTANT
Sbjct: 764  GNFCIHCQQRGHAS---ANCPSRATAFRNSRLTATNPRNDESTVSCNTCGTQCVLRTANT 820

Query: 480  PANRGRKFYSCQAQGCNFFVWED--NASSGGTVPRGSIXXXXXXXXXXXXXXXXXXXXXX 307
             ANRGR+F+SC  QGC+FF WED  N SSG      +                       
Sbjct: 821  EANRGRQFFSCPTQGCSFFAWEDSINNSSGNATTGSNSGGSGRRGRGRGGRGGQSGGGRR 880

Query: 306  XXXXSFMSATGEPISG-RCFVCGDPGHFANACPNR 205
                SF+SATGEP+SG RCF CGDP HFAN CPNR
Sbjct: 881  NSGTSFVSATGEPVSGIRCFSCGDPSHFANVCPNR 915


>ref|XP_006581777.1| PREDICTED: DNA topoisomerase 3-alpha isoform X3 [Glycine max]
          Length = 910

 Score =  900 bits (2327), Expect = 0.0
 Identities = 458/701 (65%), Positives = 518/701 (73%), Gaps = 42/701 (5%)
 Frame = -1

Query: 2178 QFPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCV 1999
            QFPTLGF+VERFWE+Q+HEPEEFW+I C+H S+EGTA F+WMRG LFDYTCA IIYEMCV
Sbjct: 218  QFPTLGFVVERFWEIQAHEPEEFWSIICSHESKEGTAEFSWMRGRLFDYTCAVIIYEMCV 277

Query: 1998 QEPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK--------------- 1864
            +EPTATVTN+RQQEK KYPP PL+TIEL+KRASRYFRMSS+HTMK               
Sbjct: 278  EEPTATVTNIRQQEKPKYPPFPLNTIELQKRASRYFRMSSDHTMKVAEELYQAGFISYPR 337

Query: 1863 -------------TIVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTK 1723
                         TIVQEQQGHP WG YAQRL+DPEA LWRNP GGGHDDKAHPPI+PTK
Sbjct: 338  TETDSFSPGTDLHTIVQEQQGHPEWGIYAQRLMDPEAGLWRNPRGGGHDDKAHPPIYPTK 397

Query: 1722 FSAGESGWSPDHHKVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYL 1543
            FS GESGWS DH K+YELVVRHFLACVS+PA+GAETTVEI+IAGE FSA GRVI+ KNYL
Sbjct: 398  FSTGESGWSQDHRKLYELVVRHFLACVSKPALGAETTVEINIAGELFSACGRVILEKNYL 457

Query: 1542 DVYRFETWGGSMIPTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDK--AGIGTDA 1369
            DVYR+E+WGGSMIPTY  GQQF PT LTL++GVTRPPPLLSEADLLS MD+  A IGTDA
Sbjct: 458  DVYRYESWGGSMIPTYTNGQQFNPTKLTLESGVTRPPPLLSEADLLSYMDREEAKIGTDA 517

Query: 1368 TMHDHIKKLLDRFYATKDSSMRFSPTKLGEALVMGYD--DMGYELWKPYLRAMMESDMKA 1195
            TM DHIKK+LDR YATKDSS RF+PT LGEALV+GYD  DM Y+LWKP LR+ ME  M  
Sbjct: 518  TMQDHIKKMLDRSYATKDSSTRFTPTNLGEALVLGYDDIDMTYKLWKPDLRSEMEKKMDD 577

Query: 1194 VSMGTKRKAEVLEACLQQMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVR 1015
            V  G K KAEVL   LQ+M+ACF++ARLNK KL EAMA+FFE   RS+S+E HA GEVVR
Sbjct: 578  VKKGDKSKAEVLVTILQKMEACFLEARLNKVKLLEAMAIFFE---RSSSDELHATGEVVR 634

Query: 1014 KCGLCQESDMVLRKKPDGNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYL 835
            +CGLCQESDM+LRK  DGNFMVGC+G+PQCRN VWLPGSVSEA+VTTN C+ C+PGPVYL
Sbjct: 635  RCGLCQESDMLLRKNRDGNFMVGCMGYPQCRNAVWLPGSVSEAVVTTNTCNFCTPGPVYL 694

Query: 834  IQFKFRRLEIPPNYNVNHLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXX 655
            IQFKFRRLEIPPNY+ NHLGCIGGCD+IL QL E+CG G R  +                
Sbjct: 695  IQFKFRRLEIPPNYSPNHLGCIGGCDEILAQLTEICGRGPRMPARPRGPTAPTSNAHHTN 754

Query: 654  XXXXXXXXXAWQTGHSSGS----YANAPESSRGRNSRSQEAGESSIPCSSCGAPCNLRTA 487
                       +TGHSS      Y N        +  S+  GE+S+ CSSCG PC LRTA
Sbjct: 755  PRQGACMNCR-ETGHSSTDCPLRYGNVQ-----HHGTSEHNGEASVSCSSCGTPCVLRTA 808

Query: 486  NTPANRGRKFYSCQAQGCNFFVWED--NASSGG-TVPRGSI--XXXXXXXXXXXXXXXXX 322
            NT  NRGRKFYSCQ+Q CNFFVWED  NA +GG +V R +                    
Sbjct: 809  NTVNNRGRKFYSCQSQECNFFVWEDSLNAGTGGRSVTRSNSIPALNPRQTGGRGSRGRGG 868

Query: 321  XXXXXXXXXSFMSATGEPISG-RCFVCGDPGHFANACPNRG 202
                     +FMSATG+PISG RC+ CGDP HFAN CP+RG
Sbjct: 869  QYGSRTANTTFMSATGDPISGRRCYTCGDPSHFANVCPHRG 909


>ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
            gi|223533243|gb|EEF34998.1| prokaryotic DNA
            topoisomerase, putative [Ricinus communis]
          Length = 833

 Score =  898 bits (2321), Expect = 0.0
 Identities = 432/615 (70%), Positives = 489/615 (79%), Gaps = 30/615 (4%)
 Frame = -1

Query: 2178 QFPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCV 1999
            QFPTLGFIVER+WE+QSHE EEFWTINC+H S EG A F+WMRGHLFDYT A I+YE+CV
Sbjct: 220  QFPTLGFIVERYWEIQSHESEEFWTINCSHTSVEGIANFSWMRGHLFDYTSAVILYELCV 279

Query: 1998 QEPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK--------------- 1864
             EPTATVT V+Q+EK KYPP+PLSTIELEKRASRYF MSSE TMK               
Sbjct: 280  LEPTATVTKVQQKEKQKYPPYPLSTIELEKRASRYFHMSSEQTMKVAEDLYQSGFISYPR 339

Query: 1863 -------------TIVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTK 1723
                         TIV++QQ HP+WGSYAQRLLDP   LWRNP+ GGHDDKAHPPIHPTK
Sbjct: 340  TETDGFSSRTDLHTIVRDQQAHPIWGSYAQRLLDPGTGLWRNPSTGGHDDKAHPPIHPTK 399

Query: 1722 FSAGESGWSPDHHKVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYL 1543
            FS GE+GWS DHH+VYELVVRHFLACVSQPA+GAETTVEIDIAGEQFSASGRVI+AKNYL
Sbjct: 400  FSPGETGWSQDHHRVYELVVRHFLACVSQPAVGAETTVEIDIAGEQFSASGRVILAKNYL 459

Query: 1542 DVYRFETWGGSMIPTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATM 1363
            DVYRFE+WGGSMIPTY +GQQF PTTLTLD+GVTRPPPLLSE+DLLSCMDKAGIGTDATM
Sbjct: 460  DVYRFESWGGSMIPTYVHGQQFMPTTLTLDSGVTRPPPLLSESDLLSCMDKAGIGTDATM 519

Query: 1362 HDHIKKLLDRFYATKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMG 1183
            HDHIKKLLDRFYATKD++ RFSPT LGEALVMGYDDMGYELWKP LR+MME DMK VSMG
Sbjct: 520  HDHIKKLLDRFYATKDANTRFSPTNLGEALVMGYDDMGYELWKPNLRSMMEYDMKEVSMG 579

Query: 1182 TKRKAEVLEACLQQMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGL 1003
             K KAEVLE CLQQMK CF+DAR+NK KL EAMAVFFERS+RS+ N+ HA  ++VR+CGL
Sbjct: 580  HKSKAEVLETCLQQMKTCFLDARINKVKLLEAMAVFFERSDRSSGNDNHATVDIVRQCGL 639

Query: 1002 CQESDMVLRKKPDGNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFK 823
            C+E++MVLR+  DGNFMVGC+G+PQCRN +WLPG + EA VTT++C+ C+PGPVYLIQFK
Sbjct: 640  CRETNMVLRRNRDGNFMVGCMGYPQCRNAIWLPGPIIEATVTTSVCNYCTPGPVYLIQFK 699

Query: 822  FRRLEIPPNYNVNHLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXX 643
            FR+LEIPP ++VNHLGCIGGCDD LRQL ++CGTGSR  +                    
Sbjct: 700  FRQLEIPPGFSVNHLGCIGGCDDTLRQLTDICGTGSRVQARARAPNTTPSNSQQSNTRFA 759

Query: 642  XXXXXAWQTGHSSGSYANAPESSRGRNSR--SQEAGESSIPCSSCGAPCNLRTANTPANR 469
                   QTGH+S         SR   SR  +++ GESS+ C +CG PC LRTANT  NR
Sbjct: 760  TCVHCH-QTGHASIDCPLQLSGSRRVQSRGTNEQMGESSVTCGTCGTPCALRTANTANNR 818

Query: 468  GRKFYSCQAQGCNFF 424
            GRKFYSC +Q CNFF
Sbjct: 819  GRKFYSCPSQSCNFF 833


>ref|XP_006279975.1| hypothetical protein CARUB_v10025845mg [Capsella rubella]
            gi|482548679|gb|EOA12873.1| hypothetical protein
            CARUB_v10025845mg [Capsella rubella]
          Length = 919

 Score =  895 bits (2314), Expect = 0.0
 Identities = 443/704 (62%), Positives = 507/704 (72%), Gaps = 46/704 (6%)
 Frame = -1

Query: 2178 QFPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCV 1999
            QFPTLGFIVER+WE+Q+HEPEEFWTINC+H SEEG ATFNWMRGHLFDY  A I+YEMCV
Sbjct: 224  QFPTLGFIVERYWEIQAHEPEEFWTINCSHQSEEGIATFNWMRGHLFDYASAVILYEMCV 283

Query: 1998 QEPTATVTNV-RQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMKT------------- 1861
            +EPTATV NV   +E+ KYPP+PL+TIELEKRASRYFR+SSEHTMK              
Sbjct: 284  EEPTATVMNVPHPRERFKYPPYPLNTIELEKRASRYFRLSSEHTMKVAEELYQAGFISYP 343

Query: 1860 ---------------IVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPT 1726
                           +V+EQ  HP WG+YAQRLL+PE  LWRNP  GGHDDKAHPPIHPT
Sbjct: 344  RTETDAFSSRTDLRAMVEEQTRHPEWGAYAQRLLEPEGGLWRNPGNGGHDDKAHPPIHPT 403

Query: 1725 KFSAGESGWSPDHHKVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNY 1546
            KFS+GES WS DH  VYELVVRH+LACVSQPA+ AETTVEIDI+GE+FSASGR I+AKNY
Sbjct: 404  KFSSGESNWSRDHLNVYELVVRHYLACVSQPAVAAETTVEIDISGERFSASGRAILAKNY 463

Query: 1545 LDVYRFETWGGSMIPTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDAT 1366
            L+VYRFE+WGGS+IP Y  GQQF PT+LTLD+ VTRPPPLL EADLLSCMDKAGIGTDAT
Sbjct: 464  LEVYRFESWGGSVIPVYEKGQQFIPTSLTLDSAVTRPPPLLCEADLLSCMDKAGIGTDAT 523

Query: 1365 MHDHIKKLLDRFYATKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSM 1186
            MHDHIKKLLDR YATKD++ RFSPT LGEALVMGYDDMGYELWKP LRA+ME DM  VS+
Sbjct: 524  MHDHIKKLLDRGYATKDANTRFSPTNLGEALVMGYDDMGYELWKPNLRAIMEHDMNEVSV 583

Query: 1185 GTKRKAEVLEACLQQMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCG 1006
            G K KAEVLE CLQQMKACF+DAR+ K KL EAM +FFERSN ++  E    GEVVR+C 
Sbjct: 584  GRKTKAEVLETCLQQMKACFLDARVKKSKLLEAMTIFFERSNNTDEGENQTAGEVVRRCN 643

Query: 1005 LCQESDMVLRKKPDGNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQF 826
            LC ESDM LRK  DGNFMVGC+ +PQCRN VWLPG   EA VTTN+C +C PGPVY I F
Sbjct: 644  LCNESDMALRKNRDGNFMVGCMNYPQCRNAVWLPGPTLEASVTTNVCQSCGPGPVYKILF 703

Query: 825  KFRRLEIPPNYNVNHLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXX 646
            KFR++ IPP + VNHLGC+GGCD IL+QL+++CGTGSR+ +                   
Sbjct: 704  KFRQIGIPPGFEVNHLGCVGGCDGILKQLIDICGTGSRSQARRAPDTVPPNNIRGSNTRQ 763

Query: 645  XXXXXXAWQTGHSSGSYANAPES-SRGRNSR----SQEAGESSIPCSSCGAPCNLRTANT 481
                    Q GH+S   +N P   S  RNSR    +    ES++ C++CG  C LRTANT
Sbjct: 764  SNVCIHCQQRGHAS---SNCPSRVSASRNSRPTGTNPRNDESTVSCNTCGTQCVLRTANT 820

Query: 480  PANRGRKFYSCQAQGCNFFVWEDNAS-----------SGGTVPRGSIXXXXXXXXXXXXX 334
             ANRGR+F+SC  QGC+FF WED  S           SGG+  RG+              
Sbjct: 821  EANRGRQFFSCPTQGCSFFAWEDGISNSSGNATTGSNSGGSGRRGN-------RGRGRGG 873

Query: 333  XXXXXXXXXXXXXSFMSATGEPISG-RCFVCGDPGHFANACPNR 205
                         SF+SATGEP+SG RCF CGDP HFANACPNR
Sbjct: 874  RGGQSGGRRGSGTSFVSATGEPVSGIRCFSCGDPSHFANACPNR 917


>ref|XP_006394227.1| hypothetical protein EUTSA_v10003618mg [Eutrema salsugineum]
            gi|557090866|gb|ESQ31513.1| hypothetical protein
            EUTSA_v10003618mg [Eutrema salsugineum]
          Length = 930

 Score =  890 bits (2301), Expect = 0.0
 Identities = 440/705 (62%), Positives = 503/705 (71%), Gaps = 47/705 (6%)
 Frame = -1

Query: 2178 QFPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCV 1999
            QFPTLGFIVER+WE+Q+HEPEEFWTINC+H SEEG ATFNWMRGHLFDY  A I+YEMCV
Sbjct: 225  QFPTLGFIVERYWEIQAHEPEEFWTINCSHESEEGLATFNWMRGHLFDYVSAVILYEMCV 284

Query: 1998 QEPTATVTNV-RQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMKT------------- 1861
             EPTATV NV   +EK KYPP+PL+TIELEKRASRYFR+SSEHTMK              
Sbjct: 285  LEPTATVMNVPHPREKFKYPPYPLNTIELEKRASRYFRLSSEHTMKVAEELYQAGFISYP 344

Query: 1860 ---------------IVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPT 1726
                           +V+EQ  HP WG YAQRLL+PE   WRNP  GGHDDKAHPPIHPT
Sbjct: 345  RTETDSFSSRTDLRAMVEEQTRHPAWGPYAQRLLEPEGGHWRNPGNGGHDDKAHPPIHPT 404

Query: 1725 KFSAGESGWSPDHHKVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNY 1546
            KFS+GES WS DH  VYELVVRH+LACVSQPAI AETTVEIDIAGE+FSASGR I+AKNY
Sbjct: 405  KFSSGESNWSRDHLNVYELVVRHYLACVSQPAIAAETTVEIDIAGERFSASGRAILAKNY 464

Query: 1545 LDVYRFETWGGSMIPTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDAT 1366
            L+VYRFE+WGGS+IP Y  GQQF PT LTLD+ VTRPPPLLSEADLLSCMDKAGIGTDAT
Sbjct: 465  LEVYRFESWGGSVIPVYEKGQQFIPTRLTLDSAVTRPPPLLSEADLLSCMDKAGIGTDAT 524

Query: 1365 MHDHIKKLLDRFYATKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSM 1186
            MHDHIKKLLDR YATKD++ RFSPT LGEALVMGYDDMGYELWKP LRA+ME DM  VS+
Sbjct: 525  MHDHIKKLLDRGYATKDANTRFSPTNLGEALVMGYDDMGYELWKPNLRAIMEHDMNEVSV 584

Query: 1185 GTKRKAEVLEACLQQMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCG 1006
            G+K KAEVL+ CLQQMKACF+DAR+ K KL E M +FFERSN ++  E    GEVVR+C 
Sbjct: 585  GSKTKAEVLQTCLQQMKACFLDARVKKAKLLETMTIFFERSNNTDEGENQTAGEVVRRCN 644

Query: 1005 LCQESDMVLRKKPDGNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQF 826
            LC ESDM LRK  DGNFMVGC+ +PQCRN VWLPG   EA VT ++C +C P PVY I+F
Sbjct: 645  LCHESDMALRKNRDGNFMVGCMSYPQCRNAVWLPGPTLEASVTADVCQSCGPAPVYKIRF 704

Query: 825  KFRRLEIPPNYNVNHLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXX 646
            KFR++ IPP ++ NHLGC+GGCDDIL+QL+++CGTGSR+ +                   
Sbjct: 705  KFRQIGIPPGFDTNHLGCVGGCDDILKQLIDICGTGSRSQARTAPGASSNNFQGGNIRQN 764

Query: 645  XXXXXXAWQTGHSSGSYANAPESSRGRNSRSQEAG------ESSIPCSSCGAPCNLRTAN 484
                    Q GH+S   AN P    G  +     G      E+++ C++CG PC LRTAN
Sbjct: 765  NTCIHCQ-QRGHTS---ANCPSRISGSRNPRPTTGTNPGNDETTVSCNTCGTPCALRTAN 820

Query: 483  TPANRGRKFYSCQAQGCNFFVWEDNAS-----------SGGTVPRGSIXXXXXXXXXXXX 337
            T ANRGR+F+SC +QGCNFF WED+ S           SGG+  RG              
Sbjct: 821  TEANRGRRFFSCPSQGCNFFAWEDSISNGSGNATAGSNSGGSGRRGR-ARGRGNRGGQSG 879

Query: 336  XXXXXXXXXXXXXXSFMSATGEPISG-RCFVCGDPGHFANACPNR 205
                          SF+SATGEP+SG RCF CGDP HFANACPNR
Sbjct: 880  GARGGGGGRGGGGTSFVSATGEPVSGRRCFSCGDPSHFANACPNR 924