BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00014014
         (1575 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP54692.2| retrotransposon protein, putative, unclassified [...   268   1e-73
gb|AAO00713.1| retrotransposon protein, putative, unclassified [...   268   1e-73
ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A...   260   3e-73
gb|EMJ26294.1| hypothetical protein PRUPE_ppa016563mg, partial [...   263   7e-72
ref|XP_004296207.1| PREDICTED: uncharacterized protein LOC101297...   258   3e-71
ref|XP_004310201.1| PREDICTED: uncharacterized protein LOC101298...   244   1e-70
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621...   252   2e-70
gb|EMJ11427.1| hypothetical protein PRUPE_ppa015539mg [Prunus pe...   258   4e-70
gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus pe...   266   2e-68
gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus pe...   266   2e-68
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   250   4e-68
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A...   246   4e-68
ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A...   246   4e-68
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A...   246   4e-68
gb|EEC81552.1| hypothetical protein OsI_24974 [Oryza sativa Indi...   265   5e-68
gb|EEC83100.1| hypothetical protein OsI_28249 [Oryza sativa Indi...   264   7e-68
gb|EMJ27906.1| hypothetical protein PRUPE_ppa020120mg [Prunus pe...   249   1e-67
gb|ABA97040.1| retrotransposon protein, putative, unclassified [...   261   6e-67
ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622...   239   6e-67
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...   247   1e-66

>gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1585

 Score =  268 bits (686), Expect(2) = 1e-73
 Identities = 131/333 (39%), Positives = 201/333 (60%)
 Frame = +2

Query: 188  GKISLSLAGKEVLIKAVLDALPVYVLSCFKLPSGICKKICQLAAQFWWGGNDLSQAKIHW 367
            G+  LS  GKEVLIKAV+ A+PVYV+  FKLP  +C+ +  L   FWWG  +  + K HW
Sbjct: 1177 GENYLSSGGKEVLIKAVIQAIPVYVMGIFKLPESVCEDLTSLTRNFWWGA-EKGKRKTHW 1235

Query: 368  KSWEKITTPKMAGGLGFHDIQLFNEALITKHLWRIITQHNLLVSKVLKARYFPNGSLLDA 547
            K+W+ +T  K  GGLGF DI+LFN+AL+ +  WR+I   + L ++VLKA+Y+PNGS++D 
Sbjct: 1236 KAWKSLTKSKSLGGLGFKDIRLFNQALLARQAWRLIDNPDSLCARVLKAKYYPNGSIVDT 1295

Query: 548  EVKQNASWMWRCWVGCRKTLEKGLRYEVGNGKNIKIWQAPWIPDAYLFRPASRPPDDLNP 727
                NAS  W+      + ++KG+ + +GNG+++++WQ PW+P     RP + P ++   
Sbjct: 1296 SFGGNASPGWQAIEHGLELVKKGIIWRIGNGRSVRVWQDPWLPRDLSRRPIT-PKNNCRI 1354

Query: 728  IWVSELISEDGNSWDVDKVENIFSIEDCSKILKIRSIGKDKRDKLVWHLEAKGNFTVKST 907
             WV++L+ ++G  WD +K+  IF   D   ILK+R+  +D+ D + WH +  GNF+V++ 
Sbjct: 1355 KWVADLMLDNG-MWDANKINQIFLPVDVEIILKLRTSSRDEEDFIAWHPDKLGNFSVRTA 1413

Query: 908  YHHLILGKVGNTDLAESSSNASLMQSIRRKNWGLKIKSKIKHFIWKCFSGILPTTSNVKK 1087
            Y    L +    + A SSS+   ++      W   + SK+K F W+  S  LPT  N KK
Sbjct: 1414 YR---LAENWAKEEASSSSSDVNIRKAWELLWKCNVPSKVKIFTWRATSNCLPTWDNKKK 1470

Query: 1088 KGVDIDDLCKFCGEAVETTEHILINCPRAQTVW 1186
            + ++I D C  CG   E T H L  CP+A+ +W
Sbjct: 1471 RNLEISDTCVICGMEKEDTMHALCRCPQAKHLW 1503



 Score = 37.0 bits (84), Expect(2) = 1e-73
 Identities = 21/67 (31%), Positives = 31/67 (46%)
 Frame = +1

Query: 4    KSSIFFSKNTSPALQHAICNLFVGIKTQKSSRYLGLPLANGRSKKDVFQFVVEAVCCRMD 183
            K SI F  +   A + AI N      T+   +YLGLP   GR  K  FQ + E +  ++ 
Sbjct: 1115 KCSILFGNSLPIASRDAITNCLQIASTEFEDKYLGLPTPGGRMHKGRFQSLRERIWKKIL 1174

Query: 184  NWKNKFV 204
             W   ++
Sbjct: 1175 QWGENYL 1181


>gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1557

 Score =  268 bits (686), Expect(2) = 1e-73
 Identities = 131/333 (39%), Positives = 201/333 (60%)
 Frame = +2

Query: 188  GKISLSLAGKEVLIKAVLDALPVYVLSCFKLPSGICKKICQLAAQFWWGGNDLSQAKIHW 367
            G+  LS  GKEVLIKAV+ A+PVYV+  FKLP  +C+ +  L   FWWG  +  + K HW
Sbjct: 1149 GENYLSSGGKEVLIKAVIQAIPVYVMGIFKLPESVCEDLTSLTRNFWWGA-EKGKRKTHW 1207

Query: 368  KSWEKITTPKMAGGLGFHDIQLFNEALITKHLWRIITQHNLLVSKVLKARYFPNGSLLDA 547
            K+W+ +T  K  GGLGF DI+LFN+AL+ +  WR+I   + L ++VLKA+Y+PNGS++D 
Sbjct: 1208 KAWKSLTKSKSLGGLGFKDIRLFNQALLARQAWRLIDNPDSLCARVLKAKYYPNGSIVDT 1267

Query: 548  EVKQNASWMWRCWVGCRKTLEKGLRYEVGNGKNIKIWQAPWIPDAYLFRPASRPPDDLNP 727
                NAS  W+      + ++KG+ + +GNG+++++WQ PW+P     RP + P ++   
Sbjct: 1268 SFGGNASPGWQAIEHGLELVKKGIIWRIGNGRSVRVWQDPWLPRDLSRRPIT-PKNNCRI 1326

Query: 728  IWVSELISEDGNSWDVDKVENIFSIEDCSKILKIRSIGKDKRDKLVWHLEAKGNFTVKST 907
             WV++L+ ++G  WD +K+  IF   D   ILK+R+  +D+ D + WH +  GNF+V++ 
Sbjct: 1327 KWVADLMLDNG-MWDANKINQIFLPVDVEIILKLRTSSRDEEDFIAWHPDKLGNFSVRTA 1385

Query: 908  YHHLILGKVGNTDLAESSSNASLMQSIRRKNWGLKIKSKIKHFIWKCFSGILPTTSNVKK 1087
            Y    L +    + A SSS+   ++      W   + SK+K F W+  S  LPT  N KK
Sbjct: 1386 YR---LAENWAKEEASSSSSDVNIRKAWELLWKCNVPSKVKIFTWRATSNCLPTWDNKKK 1442

Query: 1088 KGVDIDDLCKFCGEAVETTEHILINCPRAQTVW 1186
            + ++I D C  CG   E T H L  CP+A+ +W
Sbjct: 1443 RNLEISDTCVICGMEKEDTMHALCRCPQAKHLW 1475



 Score = 37.0 bits (84), Expect(2) = 1e-73
 Identities = 21/67 (31%), Positives = 31/67 (46%)
 Frame = +1

Query: 4    KSSIFFSKNTSPALQHAICNLFVGIKTQKSSRYLGLPLANGRSKKDVFQFVVEAVCCRMD 183
            K SI F  +   A + AI N      T+   +YLGLP   GR  K  FQ + E +  ++ 
Sbjct: 1087 KCSILFGNSLPIASRDAITNCLQIASTEFEDKYLGLPTPGGRMHKGRFQSLRERIWKKIL 1146

Query: 184  NWKNKFV 204
             W   ++
Sbjct: 1147 QWGENYL 1153


>ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 1152

 Score =  260 bits (664), Expect(2) = 3e-73
 Identities = 142/408 (34%), Positives = 226/408 (55%), Gaps = 3/408 (0%)
 Frame = +2

Query: 197  SLSLAGKEVLIKAVLDALPVYVLSCFKLPSGICKKICQLAAQFWWGGNDLSQAKIHWKSW 376
            +LS  GKEVL+KAV+ ++P YV+SCF+LP  +C ++ QL A+FWWG     + KIHW +W
Sbjct: 541  TLSGVGKEVLLKAVIQSIPTYVMSCFELPRHLCNEMHQLMARFWWGEFG-DERKIHWIAW 599

Query: 377  EKITTPKMAGGLGFHDIQLFNEALITKHLWRIITQHNLLVSKVLKARYFPNGSLLDAEVK 556
            +K+ + K  GGLGF D+ +FN+AL+ K  WR++ +   L+++VLK +YFP  SL+ AEV 
Sbjct: 600  DKLCSSKKEGGLGFRDMHVFNKALLAKQGWRMLCRPQSLLAQVLKMKYFPTSSLIQAEVG 659

Query: 557  QNASWMWRCWVGCRKTLEKGLRYEVGNGKNIKIWQAPWIPDAYLFRPASRPPDDLNPIWV 736
            +  S+ WR  +  ++ L++GLR++VGNG+NI +W  PW+P  Y F+P S P      + V
Sbjct: 660  KRISYSWRSLMRGKELLQQGLRFQVGNGENIHLWDDPWLPLPYTFKPFSLPMHGSEGMRV 719

Query: 737  SELISEDGNSWDVDKVENIFSIEDCSKILKIRSIGKDKRDKLVWHLEAKGNFTVKSTYHH 916
             ELI E    W+   +E +F+  +   ILKI        D+LVWH + KG + VKS Y  
Sbjct: 720  CELIEEGTGGWNEWLLEELFTPMESEIILKIPLSLNGGEDRLVWHFDNKGCYNVKSGY-- 777

Query: 917  LILGKV--GNTDLAESSSNASLMQSIRRKNWGLKIKSKIKHFIWKCFSGILPTTSNVKKK 1090
              +G++  G    A  S +      +  K W  ++  K++   W+   G LP+ + + KK
Sbjct: 778  -FVGRLLDGLNRKASGSDSDVQWSRLWCKLWRTQVPPKVRMHAWRLVKGTLPSRAALVKK 836

Query: 1091 GVDIDDL-CKFCGEAVETTEHILINCPRAQTVWKLAPVHWDGISDVSDSFSMWWGKICEL 1267
             V + D+ C FC   VE + H+  NC   Q  W+   V     +  S S  +W+  + E+
Sbjct: 837  QVQLPDVNCVFCSTNVEDSLHLFKNCEALQPFWQQGMVQIHPRTHPSISVEVWFWDMVEM 896

Query: 1268 KSDPCSVRRIQLTSYLLWWLWKTRNLWVFEDCWKPEVQTVEATVLEWN 1411
             S      +++     LW +W  RN  V    W+ +   +   +++W+
Sbjct: 897  LSG----EKLEGFLMALWVIWVERNNMV----WRGQFYNI-TNMMDWS 935



 Score = 44.3 bits (103), Expect(2) = 3e-73
 Identities = 21/70 (30%), Positives = 38/70 (54%)
 Frame = +1

Query: 1   DKSSIFFSKNTSPALQHAICNLFVGIKTQKSSRYLGLPLANGRSKKDVFQFVVEAVCCRM 180
           +KSS+ FS+N     QH +  +    + +   +YLGLP     SK + F+++++ V  R 
Sbjct: 475 EKSSVSFSRNVPLWKQHDLAAVLGVQRVENHEKYLGLPTELSYSKDEAFRYLIDRVRKRT 534

Query: 181 DNWKNKFVIG 210
             W++K + G
Sbjct: 535 QGWRDKTLSG 544


>gb|EMJ26294.1| hypothetical protein PRUPE_ppa016563mg, partial [Prunus persica]
          Length = 925

 Score =  263 bits (671), Expect(2) = 7e-72
 Identities = 131/341 (38%), Positives = 204/341 (59%), Gaps = 1/341 (0%)
 Frame = +2

Query: 176  GWTIGKISLSLAGKEVLIKAVLDALPVYVLSCFKLPSGICKKICQLAAQFWWGGNDLSQA 355
            GW   + +LS+AGKEVL+K V  ++P+YV++CF LP G+C +I Q+ A+FWWG    ++ 
Sbjct: 347  GWR--EQTLSIAGKEVLLKVVAQSIPLYVMNCFLLPQGLCHEIEQMMARFWWGQQGENR- 403

Query: 356  KIHWKSWEKITTPKMAGGLGFHDIQLFNEALITKHLWRIITQHNLLVSKVLKARYFPNGS 535
            KIHW  WE++   K  GG+GF  +Q FN A++ K  WR++   + L S++LKA+YFP+ +
Sbjct: 404  KIHWMRWERLCKAKTEGGMGFRCLQAFNMAMLAKQGWRLVHNPHSLASRLLKAKYFPHTN 463

Query: 536  LLDAEVKQNASWMWRCWVGCRKTLEKGLRYEVGNGKNIKIWQAPWIPDAYLFRPASRPPD 715
              +A +    S +W+     RK LE G R+++G+GK+++IW   W+P    F   + P D
Sbjct: 464  FWEATLGSRPSCVWKSIWTARKVLEMGSRFQIGDGKSVRIWGDKWVPRPAAFVVITSPLD 523

Query: 716  DLNPIWVSELISEDGN-SWDVDKVENIFSIEDCSKILKIRSIGKDKRDKLVWHLEAKGNF 892
             +    VSELI  +G+  WD+ K+ N+F   D    ++I    +   D++VW+ +  G F
Sbjct: 524  GMENTKVSELICNEGSPQWDLQKLNNLFLPVDVVDFVRIPLSIRAPPDRIVWNYDKHGLF 583

Query: 893  TVKSTYHHLILGKVGNTDLAESSSNASLMQSIRRKNWGLKIKSKIKHFIWKCFSGILPTT 1072
            TVKS Y   +  +V + D  ESSS+ S    + R  W   + +K+K F W+    ILPT 
Sbjct: 584  TVKSAYR--VALRVTSGDEDESSSSNSDTSMLWRHIWNATVPTKLKIFAWRVAHDILPTK 641

Query: 1073 SNVKKKGVDIDDLCKFCGEAVETTEHILINCPRAQTVWKLA 1195
            +N+ KKGVD+ D+C FCG+  E+  H+L  CP A   W ++
Sbjct: 642  ANLIKKGVDMQDMCMFCGDITESALHVLAMCPFAVATWNIS 682



 Score = 37.0 bits (84), Expect(2) = 7e-72
 Identities = 18/65 (27%), Positives = 33/65 (50%)
 Frame = +1

Query: 4   KSSIFFSKNTSPALQHAICNLFVGIKTQKSSRYLGLPLANGRSKKDVFQFVVEAVCCRMD 183
           KS + FS N     Q  + ++    +    + YLGLP+  GR+K   F+++ E V  ++ 
Sbjct: 287 KSCVAFSANIHMDTQSRLASVLGVPRVDSHATYLGLPMMLGRNKTFCFRYLKERVWKKLQ 346

Query: 184 NWKNK 198
            W+ +
Sbjct: 347 GWREQ 351


>ref|XP_004296207.1| PREDICTED: uncharacterized protein LOC101297422 [Fragaria vesca
            subsp. vesca]
          Length = 1096

 Score =  258 bits (659), Expect(2) = 3e-71
 Identities = 135/344 (39%), Positives = 203/344 (59%), Gaps = 1/344 (0%)
 Frame = +2

Query: 197  SLSLAGKEVLIKAVLDALPVYVLSCFKLPSGICKKICQLAAQFWWGGNDLSQAKIHWKSW 376
            +L++AGKEVLIKAV+ ++P Y++SCF+LP  +C  + +L A+FWWG       KIHW +W
Sbjct: 548  TLTIAGKEVLIKAVVQSIPTYIMSCFELPKHMCSAMQRLMARFWWGDKG-DDRKIHWVAW 606

Query: 377  EKITTPKMAGGLGFHDIQLFNEALITKHLWRIITQHNLLVSKVLKARYFPNGSLLDAEVK 556
            EK+ T K  GGLGF D++LFN AL+ K  WR+I Q N L+++VLKARYFP+ S ++AEV 
Sbjct: 607  EKLCTTKAEGGLGFRDMRLFNMALLAKQGWRLIRQPNSLLAQVLKARYFPSESFMEAEVA 666

Query: 557  QNASWMWRCWVGCRKTLEKGLRYEVGNGKNIKIWQAPWIPDAYLFRPASRPPDDLNPIWV 736
            +  S+ WR  +  R  L+KGLR++VGNG++I +W  PWIP  Y FRP S P +    + V
Sbjct: 667  KGCSFTWRSILKGRDLLKKGLRFQVGNGESISVWDDPWIPLPYSFRPYSPPMEGTEELRV 726

Query: 737  SELISEDGNSWDVDKVENIFSIEDCSKILKIRSIGKDKRDKLVWHLEAKGNFTVKSTYH- 913
             +LI  D   W+V  +  +F   +   I +I        D++VWH + KG ++VKS YH 
Sbjct: 727  CDLIDPDTGDWNVWLLNELFMGNEVDIIARIALSNGGGEDRMVWHFDNKGVYSVKSGYHV 786

Query: 914  HLILGKVGNTDLAESSSNASLMQSIRRKNWGLKIKSKIKHFIWKCFSGILPTTSNVKKKG 1093
              +  + GN      S+N +  +++ ++ WG     K++   W+   GILPT   ++++ 
Sbjct: 787  ARMTNQPGNFASTSDSNNGT--RTLYKRIWGANAPPKVRMQAWRLVKGILPTRCALERRV 844

Query: 1094 VDIDDLCKFCGEAVETTEHILINCPRAQTVWKLAPVHWDGISDV 1225
               D  C FCG   E  +H  +   +A +      V WD  +DV
Sbjct: 845  SLPDVRCVFCGFNGEDDKH--LTKEQAASFLMALWVIWDTRNDV 886



 Score = 39.7 bits (91), Expect(2) = 3e-71
 Identities = 21/65 (32%), Positives = 32/65 (49%)
 Frame = +1

Query: 4   KSSIFFSKNTSPALQHAICNLFVGIKTQKSSRYLGLPLANGRSKKDVFQFVVEAVCCRMD 183
           KS I FS+N     Q  +  +    + +K  +YLGLP     SK+  F F+ E +  R  
Sbjct: 483 KSKIAFSQNVPRWKQDELAAVLGVKRVEKHKKYLGLPTELSYSKEKAFSFLCERIRKRTQ 542

Query: 184 NWKNK 198
            W++K
Sbjct: 543 GWRDK 547


>ref|XP_004310201.1| PREDICTED: uncharacterized protein LOC101298860 [Fragaria vesca
            subsp. vesca]
          Length = 1164

 Score =  244 bits (623), Expect(2) = 1e-70
 Identities = 142/433 (32%), Positives = 229/433 (52%)
 Frame = +2

Query: 197  SLSLAGKEVLIKAVLDALPVYVLSCFKLPSGICKKICQLAAQFWWGGNDLSQAKIHWKSW 376
            +LS A KEV+IKAV+ ++P YV+S  ++   IC ++ +  A+FWWG +D  + KIHW +W
Sbjct: 743  TLSAAKKEVMIKAVVQSVPTYVMSVLEVLKHICNEMHRCMAEFWWGDSDRGR-KIHWVAW 801

Query: 377  EKITTPKMAGGLGFHDIQLFNEALITKHLWRIITQHNLLVSKVLKARYFPNGSLLDAEVK 556
            +K+  PK  GGLGF +++LFN+AL+ K  WRII   + LV++ LKA+YFP+G  L AE+ 
Sbjct: 802  DKMCAPKNEGGLGFRNMELFNQALLAKKGWRIINSLDSLVTRTLKAKYFPSGHFLKAEMG 861

Query: 557  QNASWMWRCWVGCRKTLEKGLRYEVGNGKNIKIWQAPWIPDAYLFRPASRPPDDLNPIWV 736
             +AS++WR  +  R  L KG+RY VGNG++I +W  PWI     F+  S   + L  + V
Sbjct: 862  SDASYVWRSLLKGRDLLRKGIRYHVGNGESISVWHDPWILRPCTFKTYSTVMEGLEDLKV 921

Query: 737  SELISEDGNSWDVDKVENIFSIEDCSKILKIRSIGKDKRDKLVWHLEAKGNFTVKSTYHH 916
            ++LI  D   W VD +  +F  ED  +++ +     D  D+L+WH +  G +TV+  Y+ 
Sbjct: 922  ADLIDPDTRVWMVDWLNELF-FEDEVEVISLSFRNPD--DQLIWHYDKHGLYTVRRGYYT 978

Query: 917  LILGKVGNTDLAESSSNASLMQSIRRKNWGLKIKSKIKHFIWKCFSGILPTTSNVKKKGV 1096
                 V     + S+   S  +   +  W +K++ KIK FIW+       T S +  +  
Sbjct: 979  ARCALVSQQQASTSAPRNSCDK--WKAVWKVKVQPKIKCFIWRLLKDSSSTRSALAHRIA 1036

Query: 1097 DIDDLCKFCGEAVETTEHILINCPRAQTVWKLAPVHWDGISDVSDSFSMWWGKICELKSD 1276
              D  C FC  A ET+ H+  +C     +W  +P+     +  ++S S W+    E+  +
Sbjct: 1037 LEDQSCLFCRCAQETSMHVFKDCQVIACMWLCSPLGLRARNQEANSKSDWF----EIMME 1092

Query: 1277 PCSVRRIQLTSYLLWWLWKTRNLWVFEDCWKPEVQTVEATVLEWNEFHFMGAGC*ICLWV 1456
                 ++++   LLW +W  RN  ++++       TV  ++    E+H    G       
Sbjct: 1093 TLQKSQLEVFVMLLWAIWTGRNNILWKEAQFDPAHTVRWSLKLLEEYHQANPG------- 1145

Query: 1457 FFGGRSGLAALFW 1495
               GR   AA  W
Sbjct: 1146 NSNGRKSRAAAKW 1158



 Score = 51.2 bits (121), Expect(2) = 1e-70
 Identities = 25/65 (38%), Positives = 38/65 (58%)
 Frame = +1

Query: 4   KSSIFFSKNTSPALQHAICNLFVGIKTQKSSRYLGLPLANGRSKKDVFQFVVEAVCCRMD 183
           KSSI FS+N +   Q  + +L    +  K  +YLGLP     SKK+ FQ++++    +M 
Sbjct: 678 KSSISFSRNVAREAQDRLASLLGVERVDKHDKYLGLPTELSYSKKESFQYIMDKTRDKMK 737

Query: 184 NWKNK 198
           NWK+K
Sbjct: 738 NWKDK 742


>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
          Length = 2303

 Score =  252 bits (644), Expect(2) = 2e-70
 Identities = 141/396 (35%), Positives = 215/396 (54%), Gaps = 11/396 (2%)
 Frame = +2

Query: 203  SLAGKEVLIKAVLDALPVYVLSCFKLPSGICKKICQLAAQFWWGGNDLSQAKIHWKSWEK 382
            S  GKE+LIKAV  A+P Y +S FKLP G+C++I    A+FWWG     +  IHW  W+K
Sbjct: 762  SSGGKEILIKAVAQAVPAYAMSVFKLPKGLCEEIQSEIAKFWWGSKK-DKRGIHWARWDK 820

Query: 383  ITTPKMAGGLGFHDIQLFNEALITKHLWRIITQHNLLVSKVLKARYFPNGSLLDAEVKQN 562
            ++  K  GGLGF D   FN+A++ K  WR+I   N LVSKVL+ARYF + S LDA+   N
Sbjct: 821  LSCAKSRGGLGFRDFISFNQAMVAKQGWRLIQFPNSLVSKVLRARYFKSCSFLDAKPGSN 880

Query: 563  ASWMWRCWVGCRKTLEKGLRYEVGNGKNIKIWQAPWIPDAYLFRPASRPPDDLNPIWVSE 742
             S++WR  +  R+ ++KG R+ +GNG NI +++  WIP    F+P S P   ++   V E
Sbjct: 881  PSFIWRSILWGRQVIQKGARWRIGNGSNILVYKDNWIPRPDTFKPISPPTLPIDTT-VGE 939

Query: 743  LISEDGNSWDVDKVENIFSIEDCSKILKIRSIGKDKRDKLVWHLEAKGNFTVKSTYHHLI 922
            L+ +D N+W+V K+   F  ED   ILKI      K D+++WH +  G ++VKS Y  + 
Sbjct: 940  LM-DDENNWNVAKLNQHFMQEDTEAILKIPLPRSQKVDEMMWHYDKHGEYSVKSGY-QIA 997

Query: 923  LGKVGNTDLAESSSNASLMQSIRRKNWGLKIKSKIKHFIWKCFSGILPTTSNVKKKGVDI 1102
            L      + + S SN+   +++    W +++  K+K F+W+    +LPT  N+ K+    
Sbjct: 998  LKLKAPDEPSNSGSNSKRWKAV----WSMELPEKMKIFMWRAARNLLPTAENLWKRKCLK 1053

Query: 1103 DDLCKFCGEAVETTEHILINCPRAQTVWKLAPVHWDGISDVSDS---------FSMW--W 1249
            D +C+ C   VET  H L++C  A+ +W     H      +S++         + +W  W
Sbjct: 1054 DPICQGCNREVETVRHALLDCKAARKIW----YHATSSVQISNAQNQDILEFIYEVWSTW 1109

Query: 1250 GKICELKSDPCSVRRIQLTSYLLWWLWKTRNLWVFE 1357
            GK            + + T    W +W  RN  +FE
Sbjct: 1110 GK-----------TKAEQTIAFCWAIWFARNKRIFE 1134



 Score = 42.7 bits (99), Expect(2) = 2e-70
 Identities = 24/66 (36%), Positives = 35/66 (53%)
 Frame = +1

Query: 1   DKSSIFFSKNTSPALQHAICNLFVGIKTQKSSRYLGLPLANGRSKKDVFQFVVEAVCCRM 180
           +KSS+FF        + AI N+F      K  +YLGLP   GR K   F+ V   V  ++
Sbjct: 694 EKSSMFFGGKIPEEQKAAIRNIFNLNVVSKYEKYLGLPSMIGRKKTSFFREVKLRVLSKI 753

Query: 181 DNWKNK 198
           +NW++K
Sbjct: 754 NNWQHK 759


>gb|EMJ11427.1| hypothetical protein PRUPE_ppa015539mg [Prunus persica]
          Length = 787

 Score =  258 bits (659), Expect(2) = 4e-70
 Identities = 134/383 (34%), Positives = 209/383 (54%), Gaps = 2/383 (0%)
 Frame = +2

Query: 200  LSLAGKEVLIKAVLDALPVYVLSCFKLPSGICKKICQLAAQFWWGGNDLSQAKIHWKSWE 379
            LS AGKE+L+K V  A+P+Y+++CF +P  +C +I Q+ A +WWG  D  Q KIHW SW 
Sbjct: 379  LSFAGKEILLKVVAQAVPIYMMNCFLIPKCLCDEIQQVMAHYWWGEQD-GQRKIHWLSWN 437

Query: 380  KITTPKMAGGLGFHDIQLFNEALITKHLWRIITQHNLLVSKVLKARYFPNGSLLDAEVKQ 559
            K+  PK  GGLGF ++  FN AL+ K LWR+I   N LV+++LKARYF N S+L+A++  
Sbjct: 438  KLCLPKQEGGLGFRNLYAFNMALLAKQLWRLIQTPNSLVARILKARYFKNCSILEAQIGH 497

Query: 560  NASWMWRCWVGCRKTLEKGLRYEVGNGKNIKIWQAPWIPDAYLFRPASRPPDDLNPIWVS 739
            + S++W+     R  +EKG R+ +GNG +++IW   W+P++  F+ +S   +  +   V+
Sbjct: 498  SPSYIWQSLCKARVLIEKGSRWRIGNGHSVRIWGDRWLPNSESFQVSSPQAEGFDEAKVN 557

Query: 740  ELISEDGNSWDVDKVENIFSIEDCSKILKIRSIGKDKRDKLVWHLEAKGNFTVKSTYH-- 913
             LI+     W  + ++  FS E+ + I  I    +   D L+WH E  G +TV+S +   
Sbjct: 558  SLINPVTVQWKENLLQAWFSAEEVNCIRNIPLSFRHPPDILIWHFERDGQYTVRSGHEVA 617

Query: 914  HLILGKVGNTDLAESSSNASLMQSIRRKNWGLKIKSKIKHFIWKCFSGILPTTSNVKKKG 1093
              +L +    D   +       + + +K W  ++  K+  FIW+    ILPT  N+  + 
Sbjct: 618  RRVLLRQDGDDTNMNGGPIVACEQVWKKIWKARVPPKVLIFIWRALLNILPTKDNLIHRS 677

Query: 1094 VDIDDLCKFCGEAVETTEHILINCPRAQTVWKLAPVHWDGISDVSDSFSMWWGKICELKS 1273
            +     C FCG A ET  H+L+ CP A   W L P      +D ++ F MW+     +  
Sbjct: 678  ISELGGCVFCG-AEETVAHVLLRCPMAIASWSLFPAWAHFNTDATEEFKMWFQGF--VAD 734

Query: 1274 DPCSVRRIQLTSYLLWWLWKTRN 1342
             P  V  ++     LW LW  RN
Sbjct: 735  HPLHV--LEKVMVCLWMLWYERN 755



 Score = 35.8 bits (81), Expect(2) = 4e-70
 Identities = 19/68 (27%), Positives = 32/68 (47%)
 Frame = +1

Query: 1   DKSSIFFSKNTSPALQHAICNLFVGIKTQKSSRYLGLPLANGRSKKDVFQFVVEAVCCRM 180
           +KS + FS N     Q  +  +    +  +   YLGLP   GRS++  F  + E +  ++
Sbjct: 312 EKSCVSFSNNMDRTDQDNLAAVLGVRRVDQHDVYLGLPTHVGRSRRQCFNSLKERIWKKI 371

Query: 181 DNWKNKFV 204
             WK K +
Sbjct: 372 QGWKAKLL 379


>gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus persica]
          Length = 1275

 Score =  266 bits (679), Expect = 2e-68
 Identities = 141/371 (38%), Positives = 214/371 (57%), Gaps = 1/371 (0%)
 Frame = +2

Query: 86   RNQVVILDYLWPMVDPRKMYFNLWWRLFVVGWTIGKISLSLAGKEVLIKAVLDALPVYVL 265
            RN+ V   YL   V         W +L   GW   + +LS+AGKEVL+K V  ++P+YV+
Sbjct: 697  RNKTVCFRYLKERV---------WKKL--QGWR--EQTLSIAGKEVLLKVVAQSIPLYVM 743

Query: 266  SCFKLPSGICKKICQLAAQFWWGGNDLSQAKIHWKSWEKITTPKMAGGLGFHDIQLFNEA 445
            SCF LP G+C +I Q+ A+FWWG    ++ KIHW  WE++   K  GG+GF  +Q FN A
Sbjct: 744  SCFLLPQGLCHEIEQMMARFWWGQQGENR-KIHWMRWERLCKAKTEGGMGFRCLQAFNMA 802

Query: 446  LITKHLWRIITQHNLLVSKVLKARYFPNGSLLDAEVKQNASWMWRCWVGCRKTLEKGLRY 625
            ++ K  WR++   + L S++LKA+YFP  +  +A +    S +W+     RK LE G R+
Sbjct: 803  MLAKQGWRLVHNPHSLASRLLKAKYFPQTNFWEATLGSRPSCVWKSIWTARKVLEMGSRF 862

Query: 626  EVGNGKNIKIWQAPWIPDAYLFRPASRPPDDLNPIWVSELISEDGN-SWDVDKVENIFSI 802
            ++G+GK+++IW   W+P    F   + P D +    VSELI  +G+  WD+ K+ N+F  
Sbjct: 863  QIGDGKSVRIWGDKWVPRPATFAVITSPLDGMENTKVSELICNEGSPQWDLQKLNNLFLP 922

Query: 803  EDCSKILKIRSIGKDKRDKLVWHLEAKGNFTVKSTYHHLILGKVGNTDLAESSSNASLMQ 982
             D   I++I    +   D++VW+ +  G FTVKS Y   +  +V + D  ESSS+ S   
Sbjct: 923  VDVVDIVRIPLSIRAPPDRIVWNYDKHGLFTVKSAYR--VALRVTSGDEDESSSSNSDTG 980

Query: 983  SIRRKNWGLKIKSKIKHFIWKCFSGILPTTSNVKKKGVDIDDLCKFCGEAVETTEHILIN 1162
             + R  W   + +K+K F W+    ILPT +N+ KKGVD+ D+C FCG+  E+  H+L  
Sbjct: 981  MLWRHIWNATVPTKLKIFAWRVAHDILPTKANLIKKGVDMQDMCMFCGDITESALHVLAM 1040

Query: 1163 CPRAQTVWKLA 1195
            CP A   W ++
Sbjct: 1041 CPFAVATWNIS 1051


>gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus persica]
          Length = 1755

 Score =  266 bits (679), Expect = 2e-68
 Identities = 141/371 (38%), Positives = 214/371 (57%), Gaps = 1/371 (0%)
 Frame = +2

Query: 86   RNQVVILDYLWPMVDPRKMYFNLWWRLFVVGWTIGKISLSLAGKEVLIKAVLDALPVYVL 265
            RN+ V   YL   V         W +L   GW   + +LS+AGKEVL+K V  ++P+YV+
Sbjct: 1177 RNKTVCFRYLKERV---------WKKL--QGWR--EQTLSIAGKEVLLKVVAQSIPLYVM 1223

Query: 266  SCFKLPSGICKKICQLAAQFWWGGNDLSQAKIHWKSWEKITTPKMAGGLGFHDIQLFNEA 445
            SCF LP G+C +I Q+ A+FWWG    ++ KIHW  WE++   K  GG+GF  +Q FN A
Sbjct: 1224 SCFLLPQGLCHEIEQMMARFWWGQQGENR-KIHWMRWERLCKAKTEGGMGFRCLQAFNMA 1282

Query: 446  LITKHLWRIITQHNLLVSKVLKARYFPNGSLLDAEVKQNASWMWRCWVGCRKTLEKGLRY 625
            ++ K  WR++   + L S++LKA+YFP  +  +A +    S +W+     RK LE G R+
Sbjct: 1283 MLAKQGWRLVHNPHSLASRLLKAKYFPQTNFWEATLGSRPSCVWKSIWTARKVLEMGSRF 1342

Query: 626  EVGNGKNIKIWQAPWIPDAYLFRPASRPPDDLNPIWVSELISEDGN-SWDVDKVENIFSI 802
            ++G+GK+++IW   W+P    F   + P D +    VSELI  +G+  WD+ K+ N+F  
Sbjct: 1343 QIGDGKSVRIWGDKWVPRPATFAVITSPLDGMENTKVSELICNEGSPQWDLQKLNNLFLP 1402

Query: 803  EDCSKILKIRSIGKDKRDKLVWHLEAKGNFTVKSTYHHLILGKVGNTDLAESSSNASLMQ 982
             D   I++I    +   D++VW+ +  G FTVKS Y   +  +V + D  ESSS+ S   
Sbjct: 1403 VDVVDIVRIPLSIRAPPDRIVWNYDKHGLFTVKSAYR--VALRVTSGDEDESSSSNSDTG 1460

Query: 983  SIRRKNWGLKIKSKIKHFIWKCFSGILPTTSNVKKKGVDIDDLCKFCGEAVETTEHILIN 1162
             + R  W   + +K+K F W+    ILPT +N+ KKGVD+ D+C FCG+  E+  H+L  
Sbjct: 1461 MLWRHIWNATVPTKLKIFAWRVAHDILPTKANLIKKGVDMQDMCMFCGDITESALHVLAM 1520

Query: 1163 CPRAQTVWKLA 1195
            CP A   W ++
Sbjct: 1521 CPFAVATWNIS 1531


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  250 bits (638), Expect(2) = 4e-68
 Identities = 142/414 (34%), Positives = 215/414 (51%), Gaps = 9/414 (2%)
 Frame = +2

Query: 200  LSLAGKEVLIKAVLDALPVYVLSCFKLPSGICKKICQLAAQFWWGGNDLSQAKIHWKSWE 379
            LS  GKEV+IK+V   LP YV+SCF+LP  I  K+    A+FWW  N  S+  +HW +W+
Sbjct: 568  LSKGGKEVMIKSVAATLPRYVMSCFRLPKAITSKLTSAVAKFWWSSNGDSRG-MHWMAWD 626

Query: 380  KITTPKMAGGLGFHDIQLFNEALITKHLWRIITQHNLLVSKVLKARYFPNGSLLDAEVKQ 559
            K+ + K  GGLGF ++  FN AL+ K LWR+IT  + L +KV K RYF   + LD+    
Sbjct: 627  KLCSSKSDGGLGFRNVDDFNSALLAKQLWRLITAPDSLFAKVFKGRYFRKSNPLDSIKSY 686

Query: 560  NASWMWRCWVGCRKTLEKGLRYEVGNGKNIKIWQAPWIPDAYLFRPASRPPDDLNP-IWV 736
            + S+ WR  +  R  + KGL   VG+G +I +W  PWIP A   RPA      ++P + V
Sbjct: 687  SPSYGWRSMISARSLVYKGLIKRVGSGASISVWNDPWIP-AQFPRPAKYGGSIVDPSLKV 745

Query: 737  SELISEDGNSWDVDKVENIFSIEDCSKILKIRSIGKDKRDKLVWHLEAKGNFTVKSTYHH 916
              LI    N W++D ++ +F  ED   I  +     +  D L WH    GN+TVKS YH 
Sbjct: 746  KSLIDSRSNFWNIDLLKELFDPEDVPLISALPIGNPNMEDTLGWHFTKAGNYTVKSGYHT 805

Query: 917  LILGKVGNTDLAESSSNASLMQSIRRKNWGLKIKSKIKHFIWKCFSGILPTTSNVKKKGV 1096
              L     T L         + +++   W ++   K++HF+W+  SG +P + N++K+G+
Sbjct: 806  ARLDLNEGTTLIGPD-----LTTLKAYIWKVQCPPKLRHFLWQILSGCVPVSENLRKRGI 860

Query: 1097 DIDDLCKFCGEAVETTEHILINCPRAQTVWKL-----APVHWDGISDVSDSFSMWWGKIC 1261
              D  C  CG + E+  H L  C  A+ +W L     AP  +   S  ++   ++W    
Sbjct: 861  LCDKGCVSCGASEESINHTLFQCHPARQIWALSQIPTAPGIFPSNSIFTNLDHLFWRIPS 920

Query: 1262 ELKSDPCSVRRIQLTSYLLWWLWKTRNLWVFEDCWKPEVQTVEATVLE---WNE 1414
             + S P          +++W++WK RN  VFE+  K  ++ +   V E   W E
Sbjct: 921  GVDSAP--------YPWIIWYIWKARNEKVFENVDKDPMEILLLAVKEAQSWQE 966



 Score = 37.0 bits (84), Expect(2) = 4e-68
 Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +1

Query: 4   KSSIFFSKNTSPALQHAICNLFVGIKTQKS-SRYLGLPLANGRSKKDVFQFVVEAVCCRM 180
           KSSI F      +++  I  L +GI        YLGLP + G SK  VF FV + +  R+
Sbjct: 502 KSSIQFGHKVEDSIKADI-KLILGIHNLGGMGSYLGLPESLGGSKTKVFSFVRDRLQSRI 560

Query: 181 DNWKNKFV 204
           + W  KF+
Sbjct: 561 NGWSAKFL 568


>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X1
            [Citrus sinensis]
          Length = 968

 Score =  246 bits (629), Expect(2) = 4e-68
 Identities = 137/387 (35%), Positives = 213/387 (55%), Gaps = 1/387 (0%)
 Frame = +2

Query: 203  SLAGKEVLIKAVLDALPVYVLSCFKLPSGICKKICQLAAQFWWGGNDLSQAKIHWKSWEK 382
            S  GKE+LIKAV  A+P Y +S FKLP G+C+ + +  A FWWG     +  IHW  WE+
Sbjct: 399  SSGGKEILIKAVAQAVPAYAMSVFKLPLGLCEDMQKAIAGFWWG-KKREKRSIHWSKWER 457

Query: 383  ITTPKMAGGLGFHDIQLFNEALITKHLWRIITQHNLLVSKVLKARYFPNGSLLDAEVKQN 562
            +   K  GGLGF D+  FN+AL+ K  WRII     LV++V+K +YF +   ++A++  N
Sbjct: 458  LCQAKKRGGLGFRDLSSFNQALVAKQSWRIIQAPESLVARVMKEKYFRHSCFMEAQIGSN 517

Query: 563  ASWMWRCWVGCRKTLEKGLRYEVGNGKNIKIWQAPWIPDAYLFRPASRPPDDLNPIWVSE 742
             S++WR  +  R+ + KGLR+ +G+GK +K++Q+ W+P    F+P S P   L+   VS 
Sbjct: 518  PSYIWRSILWGREVIRKGLRWRIGDGKLVKVYQSGWLPRPETFKPISPPSLPLDTT-VSV 576

Query: 743  LISEDGNSWDVDKVENIFSIEDCSKILKIRSIGKDKRDKLVWHLEAKGNFTVKSTYHHLI 922
            LI ED   W  D +   F  ED ++ILKI    +   D+++WH + KGN++VKS Y   +
Sbjct: 577  LIDED-QCWRDDVIRQHFHQEDAAQILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLAL 635

Query: 923  LGKVGNTDLAESSSNASLMQSIRRKNWGLKIKSKIKHFIWKCFSGILPTTSNVKKKGVDI 1102
              K  N   +    N S   SI    W L+I  K+K F+W+  + +LPT+ N+ K+ +  
Sbjct: 636  QMKFPNRPSSSKEDNNS-WNSI----WYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQ 690

Query: 1103 DDLCKFCGEAVETTEHILINCPRAQTVWKLAPVHWD-GISDVSDSFSMWWGKICELKSDP 1279
               C+ C    ET  H L +C  ++ +WKL     +       D  S+         +D 
Sbjct: 691  TPWCQRCRSHRETIFHSLFDCKASRKIWKLTTFEEEVKALKCKDVLSLLLA-----LADR 745

Query: 1280 CSVRRIQLTSYLLWWLWKTRNLWVFED 1360
             S   ++L   + W +W +RNL++F++
Sbjct: 746  RSKTEMELIVAVCWSIWHSRNLFIFQN 772



 Score = 40.4 bits (93), Expect(2) = 4e-68
 Identities = 21/67 (31%), Positives = 33/67 (49%)
 Frame = +1

Query: 1   DKSSIFFSKNTSPALQHAICNLFVGIKTQKSSRYLGLPLANGRSKKDVFQFVVEAVCCRM 180
           +KSS+FFS+N        I ++F      +  +YLGLP   GR K   F  +   +  ++
Sbjct: 331 EKSSMFFSENAKQGQITTIKDIFQLQVVSRHEKYLGLPSMVGRKKTSFFNEIKLRIINKI 390

Query: 181 DNWKNKF 201
            NW+  F
Sbjct: 391 SNWQANF 397


>ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
            sinensis]
          Length = 769

 Score =  246 bits (629), Expect(2) = 4e-68
 Identities = 137/387 (35%), Positives = 213/387 (55%), Gaps = 1/387 (0%)
 Frame = +2

Query: 203  SLAGKEVLIKAVLDALPVYVLSCFKLPSGICKKICQLAAQFWWGGNDLSQAKIHWKSWEK 382
            S  GKE+LIKAV  A+P Y +S FKLP G+C+ + +  A FWWG     +  IHW  WE+
Sbjct: 196  SSGGKEILIKAVAQAVPAYAMSVFKLPLGLCEDMQKAIAGFWWG-KKREKRSIHWSKWER 254

Query: 383  ITTPKMAGGLGFHDIQLFNEALITKHLWRIITQHNLLVSKVLKARYFPNGSLLDAEVKQN 562
            +   K  GGLGF D+  FN+AL+ K  WRII     LV++V+K +YF +   ++A++  N
Sbjct: 255  LCQAKKRGGLGFRDLSSFNQALVAKQSWRIIQAPESLVARVMKEKYFRHSCFMEAQIGSN 314

Query: 563  ASWMWRCWVGCRKTLEKGLRYEVGNGKNIKIWQAPWIPDAYLFRPASRPPDDLNPIWVSE 742
             S++WR  +  R+ + KGLR+ +G+GK +K++Q+ W+P    F+P S P   L+   VS 
Sbjct: 315  PSYIWRSILWGREVIRKGLRWRIGDGKLVKVYQSGWLPRPETFKPISPPSLPLDTT-VSV 373

Query: 743  LISEDGNSWDVDKVENIFSIEDCSKILKIRSIGKDKRDKLVWHLEAKGNFTVKSTYHHLI 922
            LI ED   W  D +   F  ED ++ILKI    +   D+++WH + KGN++VKS Y   +
Sbjct: 374  LIDED-QCWRDDVIRQHFHQEDAAQILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLAL 432

Query: 923  LGKVGNTDLAESSSNASLMQSIRRKNWGLKIKSKIKHFIWKCFSGILPTTSNVKKKGVDI 1102
              K  N   +    N S   SI    W L+I  K+K F+W+  + +LPT+ N+ K+ +  
Sbjct: 433  QMKFPNRPSSSKEDNNS-WNSI----WYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQ 487

Query: 1103 DDLCKFCGEAVETTEHILINCPRAQTVWKLAPVHWD-GISDVSDSFSMWWGKICELKSDP 1279
               C+ C    ET  H L +C  ++ +WKL     +       D  S+         +D 
Sbjct: 488  TPWCQRCRSHRETIFHSLFDCKASRKIWKLTTFEEEVKALKCKDVLSLLLA-----LADR 542

Query: 1280 CSVRRIQLTSYLLWWLWKTRNLWVFED 1360
             S   ++L   + W +W +RNL++F++
Sbjct: 543  RSKTEMELIVAVCWSIWHSRNLFIFQN 569



 Score = 40.4 bits (93), Expect(2) = 4e-68
 Identities = 21/67 (31%), Positives = 33/67 (49%)
 Frame = +1

Query: 1   DKSSIFFSKNTSPALQHAICNLFVGIKTQKSSRYLGLPLANGRSKKDVFQFVVEAVCCRM 180
           +KSS+FFS+N        I ++F      +  +YLGLP   GR K   F  +   +  ++
Sbjct: 128 EKSSMFFSENAKQGQITTIKDIFQLQVVSRHEKYLGLPSMVGRKKTSFFNEIKLRIINKI 187

Query: 181 DNWKNKF 201
            NW+  F
Sbjct: 188 SNWQANF 194


>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X2
            [Citrus sinensis]
          Length = 765

 Score =  246 bits (629), Expect(2) = 4e-68
 Identities = 137/387 (35%), Positives = 213/387 (55%), Gaps = 1/387 (0%)
 Frame = +2

Query: 203  SLAGKEVLIKAVLDALPVYVLSCFKLPSGICKKICQLAAQFWWGGNDLSQAKIHWKSWEK 382
            S  GKE+LIKAV  A+P Y +S FKLP G+C+ + +  A FWWG     +  IHW  WE+
Sbjct: 196  SSGGKEILIKAVAQAVPAYAMSVFKLPLGLCEDMQKAIAGFWWG-KKREKRSIHWSKWER 254

Query: 383  ITTPKMAGGLGFHDIQLFNEALITKHLWRIITQHNLLVSKVLKARYFPNGSLLDAEVKQN 562
            +   K  GGLGF D+  FN+AL+ K  WRII     LV++V+K +YF +   ++A++  N
Sbjct: 255  LCQAKKRGGLGFRDLSSFNQALVAKQSWRIIQAPESLVARVMKEKYFRHSCFMEAQIGSN 314

Query: 563  ASWMWRCWVGCRKTLEKGLRYEVGNGKNIKIWQAPWIPDAYLFRPASRPPDDLNPIWVSE 742
             S++WR  +  R+ + KGLR+ +G+GK +K++Q+ W+P    F+P S P   L+   VS 
Sbjct: 315  PSYIWRSILWGREVIRKGLRWRIGDGKLVKVYQSGWLPRPETFKPISPPSLPLDTT-VSV 373

Query: 743  LISEDGNSWDVDKVENIFSIEDCSKILKIRSIGKDKRDKLVWHLEAKGNFTVKSTYHHLI 922
            LI ED   W  D +   F  ED ++ILKI    +   D+++WH + KGN++VKS Y   +
Sbjct: 374  LIDED-QCWRDDVIRQHFHQEDAAQILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLAL 432

Query: 923  LGKVGNTDLAESSSNASLMQSIRRKNWGLKIKSKIKHFIWKCFSGILPTTSNVKKKGVDI 1102
              K  N   +    N S   SI    W L+I  K+K F+W+  + +LPT+ N+ K+ +  
Sbjct: 433  QMKFPNRPSSSKEDNNS-WNSI----WYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQ 487

Query: 1103 DDLCKFCGEAVETTEHILINCPRAQTVWKLAPVHWD-GISDVSDSFSMWWGKICELKSDP 1279
               C+ C    ET  H L +C  ++ +WKL     +       D  S+         +D 
Sbjct: 488  TPWCQRCRSHRETIFHSLFDCKASRKIWKLTTFEEEVKALKCKDVLSLLLA-----LADR 542

Query: 1280 CSVRRIQLTSYLLWWLWKTRNLWVFED 1360
             S   ++L   + W +W +RNL++F++
Sbjct: 543  RSKTEMELIVAVCWSIWHSRNLFIFQN 569



 Score = 40.4 bits (93), Expect(2) = 4e-68
 Identities = 21/67 (31%), Positives = 33/67 (49%)
 Frame = +1

Query: 1   DKSSIFFSKNTSPALQHAICNLFVGIKTQKSSRYLGLPLANGRSKKDVFQFVVEAVCCRM 180
           +KSS+FFS+N        I ++F      +  +YLGLP   GR K   F  +   +  ++
Sbjct: 128 EKSSMFFSENAKQGQITTIKDIFQLQVVSRHEKYLGLPSMVGRKKTSFFNEIKLRIINKI 187

Query: 181 DNWKNKF 201
            NW+  F
Sbjct: 188 SNWQANF 194


>gb|EEC81552.1| hypothetical protein OsI_24974 [Oryza sativa Indica Group]
          Length = 1015

 Score =  265 bits (676), Expect = 5e-68
 Identities = 144/411 (35%), Positives = 226/411 (54%), Gaps = 7/411 (1%)
 Frame = +2

Query: 152  LWWRLFVVGWTIGKISLSLAGKEVLIKAVLDALPVYVLSCFKLPSGICKKICQLAAQFWW 331
            +W R+ +  W  G+  LS  GKE+++KAV+ A+PVYV+S F+LP  +C+ + +LA  FWW
Sbjct: 605  MWKRIIL--W--GENYLSSGGKEIMLKAVIQAIPVYVMSIFRLPESVCEDLNKLARNFWW 660

Query: 332  GGNDLSQAKIHWKSWEKITTPKMAGGLGFHDIQLFNEALITKHLWRIITQHNLLVSKVLK 511
            G  D  + K HW++W  +T PK  GGLGF D +LFN+AL+ +  WR++ + + L ++V+K
Sbjct: 661  GA-DKGKRKTHWQAWSCLTKPKHNGGLGFRDFRLFNQALLARQAWRLLDKPDSLCARVMK 719

Query: 512  ARYFPNGSLLDAEVKQNASWMWRCWVGCRKTLEKGLRYEVGNGKNIKIWQAPWIPDAYLF 691
            A+Y+PNGSL+D     NAS  WR        L+KG+ + +GNG++++IW+ PWIP  +  
Sbjct: 720  AKYYPNGSLVDTAFGGNASPGWRAIEHGLALLKKGIVWRIGNGRSVRIWRDPWIPRDHSR 779

Query: 692  RPASRPPDDLNPIWVSELISEDGNSWDVDKVENIFSIEDCSKILKIRSIGKDKRDKLVWH 871
            RP +    +    WVS+L+ +DG SWDV  V  +F   D  +ILKIR+  + + D L WH
Sbjct: 780  RPIT-TKRNCRVKWVSDLLGQDG-SWDVQNVSRVFLPIDADEILKIRTSVRLEEDFLAWH 837

Query: 872  LEAKGNFTVKSTYHHLILGKVGNTDLAESSSNASLM--QSIRRKNWGLKIKSKIKHFIWK 1045
             +  G F+V+S Y   I     + D A+ SS++S    Q I    W   +  K+K F W+
Sbjct: 838  PDRLGQFSVRSAYKLAI-----SLDYADESSSSSGQNPQKIWDLIWKCNVPQKVKVFCWR 892

Query: 1046 CFSGILPTTSNVKKKGVDIDDLCKFCGEAVETTEHILINCPRAQTVWKLAPVHWDGISDV 1225
              +  L    N KK+ ++  ++C  CG   E   H L  CP A  +W+          +V
Sbjct: 893  AANNCLANQENKKKRNLERSEICCICGNETEDVSHALSRCPHAVHLWEAMKAAGSLSLNV 952

Query: 1226 SDSFSMWWGKICELKSDPCSVRRIQLTSYLLWWLWKTRN-----LWVFEDC 1363
            + + +       ++++ P   R   +   +LW +W  RN      W  E C
Sbjct: 953  AGNATGGSWFFDQIENTPAEER--MMLCMMLWRIWFVRNELYHVFWPDESC 1001


>gb|EEC83100.1| hypothetical protein OsI_28249 [Oryza sativa Indica Group]
          Length = 1300

 Score =  264 bits (675), Expect = 7e-68
 Identities = 147/414 (35%), Positives = 218/414 (52%), Gaps = 11/414 (2%)
 Frame = +2

Query: 134  RKMYFNLWWRLFVVGWTIGKISLSLAGKEVLIKAVLDALPVYVLSCFKLPSGICKKICQL 313
            + ++  +W R  ++ W  G+  LS  GKEVLIK+V+ ALPVYV+  FKLP  +C+ + + 
Sbjct: 688  QSLHERVWKR--IIQW--GENFLSSGGKEVLIKSVMQALPVYVMGIFKLPDSVCEDLSKA 743

Query: 314  AAQFWWGGNDLSQAKIHWKSWEKITTPKMAGGLGFHDIQLFNEALITKHLWRIITQHNLL 493
               FWWG  D  + + HW++W+ +T PK  GG+GF D +LFN+AL+ +  WRI+     L
Sbjct: 744  VRNFWWGAGD-GKRRTHWRAWDSLTKPKQCGGMGFRDFRLFNQALLARQSWRILEFPESL 802

Query: 494  VSKVLKARYFPNGSLLDAEVKQNASWMWRCWVGCRKTLEKGLRYEVGNGKNIKIWQAPWI 673
             ++VLKA+YFPNGSL+D     NAS  WR      + L++G+ + VGNG+ I+IW+ PWI
Sbjct: 803  CARVLKAKYFPNGSLIDTSFSGNASPGWRGIEYGLELLKQGIIWRVGNGRTIRIWRDPWI 862

Query: 674  PDAYLFRPASRPPDDLNPIWVSELISEDGNSWDVDKVENIFSIEDCSKILKIRSIGKDKR 853
            P  +  RP +         WVSEL+ ++G  WD  K++ IF   D  KIL I +    + 
Sbjct: 863  PRDFSRRPITHKGTS-RVKWVSELLDQNG-EWDSHKIQQIFLPIDVEKILSIHTSRFHEN 920

Query: 854  DKLVWHLEAKGNFTVKSTYH-HLILGKVGNTDLAESSSNASLMQSIRRKNWGLKIKSKIK 1030
            D + WH +  G F+V+S YH  L L  V    +A SSS+   +     + W   +  K++
Sbjct: 921  DFVAWHSDKLGRFSVRSAYHLALSLSNV----VASSSSSGQELSKAWNQLWSCHVPQKVR 976

Query: 1031 HFIWKCFSGILPTTSNVKKKGVDIDDLCKFCGEAVETTEHILINCPRAQTVWKL------ 1192
             FIW+  S  L T  N KKK ++   +C  CG   E   H L  CP A+ +W++      
Sbjct: 977  IFIWRAASNSLATMVNKKKKRLEHCSMCSICGTEEEDVAHALCRCPHAKYLWEVMRRAKA 1036

Query: 1193 ----APVHWDGISDVSDSFSMWWGKICELKSDPCSVRRIQLTSYLLWWLWKTRN 1342
                A  +W G   + D             S+  S         +LW +W  RN
Sbjct: 1037 ITVQADRNWTGADWIFDI------------SERISKEERPTLLMMLWRIWYVRN 1078


>gb|EMJ27906.1| hypothetical protein PRUPE_ppa020120mg [Prunus persica]
          Length = 1011

 Score =  249 bits (635), Expect(2) = 1e-67
 Identities = 133/336 (39%), Positives = 197/336 (58%), Gaps = 3/336 (0%)
 Frame = +2

Query: 188  GKISLSLAGKEVLIKAVLDALPVYVLSCFKLPSGICKKICQLAAQFWWGGNDLSQAKIHW 367
            GK+ LS AGKE+LIK V  A+P+Y +S F LP  +C+ + +L AQFWW  +  ++ KIHW
Sbjct: 674  GKL-LSGAGKEILIKVVAQAIPIYTMSYFLLPKYVCEDLNKLVAQFWWNSSTENK-KIHW 731

Query: 368  KSWEKITTPKMAGGLGFHDIQLFNEALITKHLWRIITQHNLLVSKVLKARYFPNGSLLDA 547
             +W+++  PK  GGLGF ++  FN AL+ K  WR++   + L++KVLKA+YFP  S L+ 
Sbjct: 732  MAWDRLCAPKEEGGLGFRNLHAFNLALLAKQGWRLLQNPDSLITKVLKAKYFPTRSFLET 791

Query: 548  EVKQNASWMWRCWVGCRKTLEKGLRYEVGNGKNIKIWQAPWIPDAYLFRPASRPPDDLNP 727
             V  +AS +W+     R  + +G R++VG+G  I IW+  W+P    FR     P+    
Sbjct: 792  AVSLHASVVWKSLYEARTVIIQGSRWQVGSGDTIGIWEDRWLPQPNSFRIFFPKPEHSAI 851

Query: 728  IWVSELISEDGNSWDVDKVENIFSIEDCSKILKIRSIGKDKR---DKLVWHLEAKGNFTV 898
              VS+LI  D   W+V  ++N+F  E+   ++ IRSI    R   D LVWH + KG FTV
Sbjct: 852  TKVSDLIHGDSREWNVPLLQNVFFPEE---VMLIRSIPLSLRLTPDMLVWHYDKKGMFTV 908

Query: 899  KSTYHHLILGKVGNTDLAESSSNASLMQSIRRKNWGLKIKSKIKHFIWKCFSGILPTTSN 1078
            KS YH  +   V ++    SSSN+  +       W   + +++K F W+  SGILPT +N
Sbjct: 909  KSAYH--VARSVHSSTGRASSSNSDAVARNWSLLWKAIVPARVKTFWWRVISGILPTKAN 966

Query: 1079 VKKKGVDIDDLCKFCGEAVETTEHILINCPRAQTVW 1186
            + +K V +D+ C  C   VE++ HIL +CP A   W
Sbjct: 967  LARKKVSLDEECMLCEGPVESSIHILCDCPFAICAW 1002



 Score = 37.0 bits (84), Expect(2) = 1e-67
 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
 Frame = +1

Query: 4   KSSIFFSKNTSPALQHAICNLFVGIK-TQKSSRYLGLPLANGRSKKDVFQFVVEAVCCRM 180
           KS++ FSKN     Q  +   F+GI      S+YLGLP+   + K   F  + E +  ++
Sbjct: 611 KSAVCFSKNVHRGDQLMLAQ-FMGIPCVDHHSQYLGLPMVLDKKKGASFNHLKERLWKKL 669

Query: 181 DNWKNKFVIG 210
             WK K + G
Sbjct: 670 QTWKGKLLSG 679


>gb|ABA97040.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1913

 Score =  261 bits (667), Expect = 6e-67
 Identities = 140/399 (35%), Positives = 222/399 (55%), Gaps = 2/399 (0%)
 Frame = +2

Query: 152  LWWRLFVVGWTIGKISLSLAGKEVLIKAVLDALPVYVLSCFKLPSGICKKICQLAAQFWW 331
            +W R+ +  W  G+  LS  GKE+++K V+ A+PVYV+S F+LP  +C+ + +LA  FWW
Sbjct: 1347 MWKRIIL--W--GENYLSSGGKEIMLKVVIQAIPVYVMSIFRLPESVCEDLNKLARNFWW 1402

Query: 332  GGNDLSQAKIHWKSWEKITTPKMAGGLGFHDIQLFNEALITKHLWRIITQHNLLVSKVLK 511
            G  D  + K HW++W  +T PK  GGL F D +LFN+AL+ +  WR++ + + L ++V+K
Sbjct: 1403 GA-DKGKRKTHWRAWSCLTKPKHNGGLAFRDFRLFNQALLARQAWRLLDKPDSLCARVMK 1461

Query: 512  ARYFPNGSLLDAEVKQNASWMWRCWVGCRKTLEKGLRYEVGNGKNIKIWQAPWIPDAYLF 691
            A+Y+PNGSL+D     NAS  WR        L+KG+ + +GNG++++IW+ PWIP  +  
Sbjct: 1462 AKYYPNGSLVDTAFGGNASPGWRAIEHGLALLKKGIVWRIGNGRSVRIWRDPWIPRDHSC 1521

Query: 692  RPASRPPDDLNPIWVSELISEDGNSWDVDKVENIFSIEDCSKILKIRSIGKDKRDKLVWH 871
            RP +    +    WVS+L+ +DG SWDV KV  +F   D  +ILKIR+  + + D L WH
Sbjct: 1522 RPIT-TKRNCRVKWVSDLLGQDG-SWDVQKVSRVFLPIDADEILKIRTSVRLEEDFLSWH 1579

Query: 872  LEAKGNFTVKSTYHHLILGKVGNTDLAESSSNASLM--QSIRRKNWGLKIKSKIKHFIWK 1045
             +  G F+V+S Y   I     + D A+ SS++S    Q I    W   +  K+K F W+
Sbjct: 1580 PDRLGQFSVRSAYKLAI-----SLDYADESSSSSGQNPQKIWDLIWKCNVPQKVKVFCWR 1634

Query: 1046 CFSGILPTTSNVKKKGVDIDDLCKFCGEAVETTEHILINCPRAQTVWKLAPVHWDGISDV 1225
              +  L    N KK+ ++  ++C  CG   E   H L  CP A  +W+          +V
Sbjct: 1635 AANNCLANQENKKKRNLERSEICCICGNETEDVSHALSRCPHAVHLWEAMKAAGSLSLNV 1694

Query: 1226 SDSFSMWWGKICELKSDPCSVRRIQLTSYLLWWLWKTRN 1342
            + + +       ++++ P   R   +   +LW +W  RN
Sbjct: 1695 AGNATGGSWFFDQIENTPAEER--MMLCMMLWRIWFVRN 1731


>ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622884 [Citrus sinensis]
          Length = 1160

 Score =  239 bits (611), Expect(2) = 6e-67
 Identities = 130/386 (33%), Positives = 214/386 (55%), Gaps = 1/386 (0%)
 Frame = +2

Query: 203  SLAGKEVLIKAVLDALPVYVLSCFKLPSGICKKICQLAAQFWWGGNDLSQAKIHWKSWEK 382
            S  GKEVLIKA + A+P + +S FK+P GIC+ I ++   FWWG +   +  IHW  WEK
Sbjct: 555  SCGGKEVLIKAAVQAIPAFAMSVFKIPLGICEDIQRIVGNFWWGSSR-ERRSIHWSKWEK 613

Query: 383  ITTPKMAGGLGFHDIQLFNEALITKHLWRIITQHNLLVSKVLKARYFPNGSLLDAEVKQN 562
            ++  K  GG+GF D   FN+AL+ K  WRI    + LV++VL+ARYF + + L+A++  N
Sbjct: 614  MSQAKCKGGMGFRDFASFNQALLAKQGWRIQQCPDSLVARVLQARYFHSSNFLNAKIGSN 673

Query: 563  ASWMWRCWVGCRKTLEKGLRYEVGNGKNIKIWQAPWIPDAYLFRPASRPPDDLNPIWVSE 742
             S++WR  +  R+ +  G R+ +GNG+++ I +A WIP  + F+P  +P      + VSE
Sbjct: 674  PSYIWRSILWGRQIICGGSRWRIGNGQDVHIHKANWIPKPFTFKPVIKPTMPSEAL-VSE 732

Query: 743  LISEDGNSWDVDKVENIFSIEDCSKILKIRSIGKDKRDKLVWHLEAKGNFTVKSTYHHLI 922
            LI+ + N WD + +   F   D   I +I    + + D+L+WH    G +TVKS Y   +
Sbjct: 733  LINGE-NCWDEELIYKHFDKMDADVITQIPLPRRLREDELIWHFGKSGQYTVKSGYQRAL 791

Query: 923  LGKVGNTDLAESSSNASLMQSIRRKNWGLKIKSKIKHFIWKCFSGILPTTSNVKKKGVDI 1102
              K+    +  SS ++    +I    W L +  KI+ F+W+    +LP+  N+ K+ +  
Sbjct: 792  --KIRFPAMPSSSESSKNEWNI---IWSLALPKKIRIFVWRAAKNLLPSAENLWKRKIVQ 846

Query: 1103 DDLCKFCGEAVETTEHILINCPRAQTVWKLAPVHWD-GISDVSDSFSMWWGKICELKSDP 1279
            +  C+ C   +E   H L++C  A+ VW+L+  + D   +   D  S+  G +  ++S+ 
Sbjct: 847  EPTCQLCKMGIENVFHALVDCKAAKKVWRLSLFYIDIQAAPGQDILSLLHG-VKRMRSN- 904

Query: 1280 CSVRRIQLTSYLLWWLWKTRNLWVFE 1357
                 + L + +LW  W  RN W+F+
Sbjct: 905  ---ADVDLFAVMLWAKWNARNQWLFK 927



 Score = 43.5 bits (101), Expect(2) = 6e-67
 Identities = 24/67 (35%), Positives = 34/67 (50%)
 Frame = +1

Query: 1   DKSSIFFSKNTSPALQHAICNLFVGIKTQKSSRYLGLPLANGRSKKDVFQFVVEAVCCRM 180
           +KSS+F S N   A   AI N+F      K   YLGLP   GR +   F  +   V  ++
Sbjct: 487 EKSSLFLSGNVQQAQASAIGNIFHLNIVSKYENYLGLPAMVGRKRSGFFNDIKLKVLNKI 546

Query: 181 DNWKNKF 201
            +W++KF
Sbjct: 547 SSWQHKF 553


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
            (fragment)
          Length = 1365

 Score =  247 bits (631), Expect(2) = 1e-66
 Identities = 137/389 (35%), Positives = 208/389 (53%), Gaps = 2/389 (0%)
 Frame = +2

Query: 197  SLSLAGKEVLIKAVLDALPVYVLSCFKLPSGICKKICQLAAQFWWGGNDLSQA-KIHWKS 373
            +LS  GKEVL+K++  ALPVYV+SCFKLP  +C+K+  +   FWW  N + Q  KIHW S
Sbjct: 782  TLSQGGKEVLLKSIALALPVYVMSCFKLPKNLCQKLTTVMMDFWW--NSMQQKRKIHWLS 839

Query: 374  WEKITTPKMAGGLGFHDIQLFNEALITKHLWRIITQHNLLVSKVLKARYFPNGSLLDAEV 553
            W+++T PK  GG GF D+Q FN+AL+ K  WR++ +   L S+V ++RYF N   L A  
Sbjct: 840  WQRLTLPKDQGGFGFKDLQCFNQALLAKQAWRVLQEKGSLFSRVFQSRYFSNSDFLSATR 899

Query: 554  KQNASWMWRCWVGCRKTLEKGLRYEVGNGKNIKIWQAPWIPDAYLFRPASRPPDDLNPIW 733
                S+ WR  +  R+ L +GLR  +GNG+   +W   W+ D    RP +R       + 
Sbjct: 900  GSRPSYAWRSILFGRELLMQGLRTVIGNGQKTFVWTDKWLHDGSNRRPLNRRRFINVDLK 959

Query: 734  VSELISEDGNSWDVDKVENIFSIEDCSKILKIRSIGKDKRDKLVWHLEAKGNFTVKSTYH 913
            VS+LI     +W+++ + ++F  +D   ILK R +   K D   W     G ++VK+ Y 
Sbjct: 960  VSQLIDPTSRNWNLNMLRDLFPWKDVEIILKQRPL-FFKEDSFCWLHSHNGLYSVKTGYE 1018

Query: 914  HLILGKVGNTDLAESSSNASLMQSIRRKNWGLKIKSKIKHFIWKCFSGILPTTSNVKKKG 1093
               L K  +  L + +     + S+  K W L    KI+ F+WK   G +P    ++ +G
Sbjct: 1019 --FLSKQVHHRLYQEAKVKPSVNSLFDKIWNLHTAPKIRIFLWKALHGAIPVEDRLRTRG 1076

Query: 1094 VDIDDLCKFCGEAVETTEHILINCPRAQTVWKLAPVHWDGISDVSDSFSMWWGKICELKS 1273
            +  DD C  C    ET  HIL  CP A+ VW +  +   G S+ S+S      ++ +L  
Sbjct: 1077 IRSDDGCLMCDTENETINHILFECPLARQVWAITHLSSAG-SEFSNSVYTNMSRLIDLTQ 1135

Query: 1274 DPCSVRRIQLTS-YLLWWLWKTRNLWVFE 1357
                   ++  S ++LW+LWK RN  +FE
Sbjct: 1136 QNDLPHHLRFVSPWILWFLWKNRNALLFE 1164



 Score = 35.0 bits (79), Expect(2) = 1e-66
 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
 Frame = +1

Query: 1   DKSSIFFSKNTSPALQHAICNLFVGIKTQKSS-RYLGLPLANGRSKKDVFQFVVEAVCCR 177
           +KS+I F KN    ++  I +   GI  +  + +YLGLP     SK+D+F F+ E +  R
Sbjct: 716 NKSAITFGKNVDIQIKDWIKSRS-GISLEGGTGKYLGLPECLSGSKRDLFGFIKEKLQSR 774

Query: 178 MDNWKNK 198
           +  W  K
Sbjct: 775 LTGWYAK 781