BLASTX nr result
ID: Rehmannia25_contig00013666
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00013666
(443 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXC18499.1| Retrovirus-related Pol polyprotein from transposo... 86 5e-15
gb|ADJ18449.1| gag/pol protein [Bryonia dioica] 85 1e-14
emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera] 82 7e-14
ref|XP_004150929.1| PREDICTED: uncharacterized protein LOC101213... 81 1e-13
ref|XP_004153206.1| PREDICTED: uncharacterized protein LOC101203... 81 2e-13
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 77 2e-12
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e... 77 3e-12
emb|CAN82637.1| hypothetical protein VITISV_028818 [Vitis vinifera] 76 4e-12
emb|CAN69855.1| hypothetical protein VITISV_041230 [Vitis vinifera] 76 4e-12
emb|CAN69366.1| hypothetical protein VITISV_037339 [Vitis vinifera] 76 4e-12
gb|EOY22757.1| Uncharacterized protein TCM_014834 [Theobroma cacao] 76 5e-12
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap... 76 5e-12
gb|AAC95173.1| putative retroelement pol polyprotein [Arabidopsi... 76 5e-12
gb|EOY17849.1| Copia-like retrotransposable element, putative [T... 75 7e-12
gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-... 75 7e-12
gb|ABF96491.1| retrotransposon protein, putative, Ty1-copia subc... 75 7e-12
gb|AAP03364.1| putative polyprotein [Oryza sativa Japonica Group] 75 7e-12
emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera] 75 1e-11
dbj|BAA22288.1| polyprotein [Oryza australiensis] 74 2e-11
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc... 74 2e-11
>gb|EXC18499.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis]
Length = 414
Score = 85.9 bits (211), Expect = 5e-15
Identities = 40/63 (63%), Positives = 50/63 (79%)
Frame = -1
Query: 356 KSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSASGTPQQ 177
KS+ F KF+EF+AE EKQLG +K RSDR GEY+ EF+ +L +EG+VSQL+A GTPQQ
Sbjct: 58 KSETFGKFREFRAEVEKQLGKPIKTPRSDREGEYMDQEFRDFLIEEGVVSQLTAPGTPQQ 117
Query: 176 NGV 168
NGV
Sbjct: 118 NGV 120
>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
Length = 1292
Score = 84.7 bits (208), Expect = 1e-14
Identities = 39/64 (60%), Positives = 52/64 (81%)
Frame = -1
Query: 359 NKSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSASGTPQ 180
+KS++F+KF+E+KAE E ++G +K LRSDRGGEY+ S+F+ YL + GI SQLSA TPQ
Sbjct: 541 HKSESFEKFKEYKAEVENEIGKTIKTLRSDRGGEYMDSKFQDYLIEFGIQSQLSAPSTPQ 600
Query: 179 QNGV 168
QNGV
Sbjct: 601 QNGV 604
>emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]
Length = 1544
Score = 82.0 bits (201), Expect = 7e-14
Identities = 38/63 (60%), Positives = 51/63 (80%)
Frame = -1
Query: 356 KSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSASGTPQQ 177
KS+ F+KF+ FKAE E++ G ++K LRSD GGEY+S EF ++L+++GI SQLSA G PQQ
Sbjct: 861 KSECFEKFKAFKAEMEQRHGKYIKTLRSDHGGEYISREFITFLSEQGITSQLSAPGMPQQ 920
Query: 176 NGV 168
NGV
Sbjct: 921 NGV 923
>ref|XP_004150929.1| PREDICTED: uncharacterized protein LOC101213227 [Cucumis sativus]
Length = 513
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/69 (55%), Positives = 50/69 (72%)
Frame = -1
Query: 374 LMIYFNKSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSA 195
+ + +KS + +KF+E+KAE E +LG +K LRSDRGGEY+ F+ YL + GI SQLSA
Sbjct: 307 IYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQLSA 366
Query: 194 SGTPQQNGV 168
TPQQNGV
Sbjct: 367 PSTPQQNGV 375
>ref|XP_004153206.1| PREDICTED: uncharacterized protein LOC101203928, partial [Cucumis
sativus]
Length = 486
Score = 80.9 bits (198), Expect = 2e-13
Identities = 38/69 (55%), Positives = 50/69 (72%)
Frame = -1
Query: 374 LMIYFNKSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSA 195
+ + +KS + +KF+E+KAE E +LG +K LRSDRGGEY+ F+ YL + GI SQLSA
Sbjct: 334 IYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFQDYLIENGIKSQLSA 393
Query: 194 SGTPQQNGV 168
TPQQNGV
Sbjct: 394 PSTPQQNGV 402
>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
putative retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 77.0 bits (188), Expect = 2e-12
Identities = 37/64 (57%), Positives = 47/64 (73%)
Frame = -1
Query: 359 NKSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSASGTPQ 180
+KSK+F+ F+EF+ E + Q G +K LRSDRGGEYLS F +L + GIVSQL+ GTPQ
Sbjct: 180 HKSKSFENFKEFQNEVQNQFGKSIKALRSDRGGEYLSQVFSDHLRECGIVSQLTPPGTPQ 239
Query: 179 QNGV 168
NGV
Sbjct: 240 WNGV 243
>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 76.6 bits (187), Expect = 3e-12
Identities = 37/64 (57%), Positives = 49/64 (76%)
Frame = -1
Query: 359 NKSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSASGTPQ 180
+KS++F+KF+EF+ E + QLG +K LRSDRGGE+LS EF ++L Q GIV QL+ TPQ
Sbjct: 624 HKSESFEKFKEFQNEVQNQLGKTIKSLRSDRGGEFLSQEFGNHLKQCGIVPQLTPPSTPQ 683
Query: 179 QNGV 168
NGV
Sbjct: 684 WNGV 687
>emb|CAN82637.1| hypothetical protein VITISV_028818 [Vitis vinifera]
Length = 1114
Score = 76.3 bits (186), Expect = 4e-12
Identities = 35/64 (54%), Positives = 47/64 (73%)
Frame = -1
Query: 359 NKSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSASGTPQ 180
NKS+ F+ F+ +KAE E QLG ++K LRSDRGGEY SSEF S+ + GI+ + +A TPQ
Sbjct: 427 NKSETFNAFKVYKAEVENQLGKNIKVLRSDRGGEYFSSEFNSFCEEYGIIHECTAPYTPQ 486
Query: 179 QNGV 168
NG+
Sbjct: 487 HNGI 490
>emb|CAN69855.1| hypothetical protein VITISV_041230 [Vitis vinifera]
Length = 1236
Score = 76.3 bits (186), Expect = 4e-12
Identities = 35/64 (54%), Positives = 47/64 (73%)
Frame = -1
Query: 359 NKSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSASGTPQ 180
NKS+ F+ F+ +KAE E QLG ++K LRSDRGGEY SSEF S+ + GI+ + +A TPQ
Sbjct: 489 NKSETFNAFKVYKAEVENQLGKNIKVLRSDRGGEYFSSEFNSFCEEYGIIHECTAPYTPQ 548
Query: 179 QNGV 168
NG+
Sbjct: 549 HNGI 552
>emb|CAN69366.1| hypothetical protein VITISV_037339 [Vitis vinifera]
Length = 225
Score = 76.3 bits (186), Expect = 4e-12
Identities = 37/62 (59%), Positives = 46/62 (74%)
Frame = -1
Query: 356 KSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSASGTPQQ 177
KS DKF E KAE+ QLG +K LRS+R GEY+S++F S+L + I+SQLSA GTPQQ
Sbjct: 58 KSDTLDKFIELKAESRNQLGKRIKALRSNRVGEYMSTQFDSFLKEHEIISQLSAPGTPQQ 117
Query: 176 NG 171
NG
Sbjct: 118 NG 119
>gb|EOY22757.1| Uncharacterized protein TCM_014834 [Theobroma cacao]
Length = 996
Score = 75.9 bits (185), Expect = 5e-12
Identities = 39/69 (56%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Frame = -1
Query: 368 IYF--NKSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSA 195
IYF +KS+ F FQ+FKA+ E + G +K+LR+D GGEY SSEF SYL EGI QL+A
Sbjct: 347 IYFIQHKSEVFSIFQKFKAKVENESGCRIKKLRTDNGGEYTSSEFTSYLENEGIHHQLTA 406
Query: 194 SGTPQQNGV 168
P+QNGV
Sbjct: 407 PYCPEQNGV 415
>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gi|62701883|gb|AAX92956.1| retrotransposon protein,
putative, Ty1-copia sub-class [Oryza sativa Japonica
Group] gi|108864259|gb|ABA92827.2| retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1184
Score = 75.9 bits (185), Expect = 5e-12
Identities = 42/91 (46%), Positives = 59/91 (64%)
Frame = -1
Query: 440 SSHGAFESHFKFSRKFV*FL*CLMIYFNKSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGG 261
++ G F F F+ F + + + +KS++F+KF+EF E + LG +K LRSDRGG
Sbjct: 486 TARGGFGYFFTFTDDFSRYG-YVYLMRHKSESFEKFKEFHNEVQNHLGKTIKYLRSDRGG 544
Query: 260 EYLSSEFKSYLTQEGIVSQLSASGTPQQNGV 168
EYLS EF ++L + GIV QL+ GTPQ NGV
Sbjct: 545 EYLSLEFGNHLKECGIVPQLTPPGTPQWNGV 575
>gb|AAC95173.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1200
Score = 75.9 bits (185), Expect = 5e-12
Identities = 35/63 (55%), Positives = 48/63 (76%)
Frame = -1
Query: 356 KSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSASGTPQQ 177
KS+AF KF+ FKA E++ G +K LR+DRGGE+LS EF+++ +EGI+ L+A TPQQ
Sbjct: 490 KSEAFGKFKTFKATVEQETGEKIKTLRTDRGGEFLSQEFQTFCEEEGIIRHLTAPYTPQQ 549
Query: 176 NGV 168
NGV
Sbjct: 550 NGV 552
>gb|EOY17849.1| Copia-like retrotransposable element, putative [Theobroma cacao]
Length = 1090
Score = 75.5 bits (184), Expect = 7e-12
Identities = 39/69 (56%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Frame = -1
Query: 368 IYF--NKSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSA 195
IYF +KS+ F FQ+FKA+ E + G +K+LR+D GGEY SSEF SYL EGI QL+A
Sbjct: 485 IYFIQHKSEVFSVFQKFKAKVENESGCRIKKLRTDNGGEYTSSEFISYLENEGIHHQLTA 544
Query: 194 SGTPQQNGV 168
P+QNGV
Sbjct: 545 PYCPEQNGV 553
>gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77550379|gb|ABA93176.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 938
Score = 75.5 bits (184), Expect = 7e-12
Identities = 37/64 (57%), Positives = 48/64 (75%)
Frame = -1
Query: 359 NKSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSASGTPQ 180
+KS +F+KF+EF+ E + LG +K LRSDRGGEYLS EF ++L + GIV QL+ GTPQ
Sbjct: 421 HKSDSFEKFKEFQNEVQNHLGKTIKYLRSDRGGEYLSLEFGNHLKECGIVPQLTPPGTPQ 480
Query: 179 QNGV 168
NGV
Sbjct: 481 WNGV 484
>gb|ABF96491.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 767
Score = 75.5 bits (184), Expect = 7e-12
Identities = 36/70 (51%), Positives = 51/70 (72%)
Frame = -1
Query: 377 CLMIYFNKSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLS 198
C+ + +KS++F+KF+EF+ E + LG +K LRSDRGGEYLS EF ++L + GI+ QL+
Sbjct: 395 CVYLMRHKSESFEKFKEFQNEVQNNLGKTIKYLRSDRGGEYLSLEFGNHLKECGIIPQLT 454
Query: 197 ASGTPQQNGV 168
GTPQ N V
Sbjct: 455 PPGTPQWNWV 464
>gb|AAP03364.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 657
Score = 75.5 bits (184), Expect = 7e-12
Identities = 36/70 (51%), Positives = 51/70 (72%)
Frame = -1
Query: 377 CLMIYFNKSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLS 198
C+ + +KS++F+KF+EF+ E + LG +K LRSDRGGEYLS EF ++L + GI+ QL+
Sbjct: 285 CVYLMRHKSESFEKFKEFQNEVQNNLGKTIKYLRSDRGGEYLSLEFGNHLKECGIIPQLT 344
Query: 197 ASGTPQQNGV 168
GTPQ N V
Sbjct: 345 PPGTPQWNWV 354
>emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera]
Length = 1105
Score = 74.7 bits (182), Expect = 1e-11
Identities = 34/64 (53%), Positives = 46/64 (71%)
Frame = -1
Query: 359 NKSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSASGTPQ 180
NKS+ F+ F+ +K E E QLG ++K LRSDRGGEY SSEF S+ + GI+ + +A TPQ
Sbjct: 330 NKSETFNAFKVYKTEVENQLGKNIKVLRSDRGGEYFSSEFNSFCEEYGIIHECTAPYTPQ 389
Query: 179 QNGV 168
NG+
Sbjct: 390 HNGI 393
>dbj|BAA22288.1| polyprotein [Oryza australiensis]
Length = 1317
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/64 (56%), Positives = 48/64 (75%)
Frame = -1
Query: 359 NKSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSASGTPQ 180
+KS++F+KF+EF+ E + LG +K LRSDRGGEY+S EF ++L GIV QL+ GTPQ
Sbjct: 536 HKSESFEKFKEFQNEVQNHLGKTIKFLRSDRGGEYVSQEFGNHLKDCGIVPQLTPPGTPQ 595
Query: 179 QNGV 168
NGV
Sbjct: 596 WNGV 599
>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1248
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/64 (56%), Positives = 48/64 (75%)
Frame = -1
Query: 359 NKSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSASGTPQ 180
+KS++F+KFQEF+ E + LG +K LRSDRGGEYLS E+ ++L + GIV QL+ GTPQ
Sbjct: 501 HKSESFEKFQEFQNEVQNHLGKTIKYLRSDRGGEYLSLEYGNHLKECGIVPQLTPPGTPQ 560
Query: 179 QNGV 168
N V
Sbjct: 561 WNAV 564