BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00013659
         (2018 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG03096.2|AC073405_12 putative polyprotein [Oryza sativa Jap...   362   e-121
gb|AAV24814.1| putative polyprotein [Oryza sativa Japonica Group]     363   e-121
emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group]         363   e-121
gb|ABA91445.2| retrotransposon protein, putative, Ty1-copia subc...   360   e-121
gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza s...   360   e-120
gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subc...   360   e-120
gb|ABF98943.1| retrotransposon protein, putative, unclassified, ...   360   e-120
gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subc...   360   e-120
gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-...   360   e-120
gb|AAT77367.1| putative polyprotein [Oryza sativa Japonica Group...   360   e-120
gb|AAT69606.1| putative polyprotein [Oryza sativa Japonica Group...   360   e-120
gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japoni...   360   e-120
gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-...   360   e-120
gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Ja...   360   e-120
gb|AAX92828.1| retrotransposon protein, putative, Ty1-copia sub-...   360   e-120
gb|ABF98853.1| retrotransposon protein, putative, Ty1-copia subc...   360   e-120
gb|AAK71544.1|AC087852_4 putative polyprotein [Oryza sativa Japo...   360   e-120
gb|ABA96779.1| retrotransposon protein, putative, Ty1-copia subc...   361   e-120
gb|ABA99836.1| retrotransposon protein, putative, Ty1-copia subc...   360   e-120
emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]         360   e-120

>gb|AAG03096.2|AC073405_12 putative polyprotein [Oryza sativa Japonica Group]
            gi|57863849|gb|AAW56890.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1274

 Score =  362 bits (930), Expect(2) = e-121
 Identities = 181/336 (53%), Positives = 235/336 (69%), Gaps = 1/336 (0%)
 Frame = +3

Query: 1014 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 1193
            F S QV+   TV MGNGS A V G G V L  +SGK++ L  V H+P I +NL+S S L 
Sbjct: 317  FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 376

Query: 1194 RNGYKVVFESNKVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIANVECCDTW 1373
            R+G+K+VFESNKVV+S+HG FIGKG+   GLFR S+              + +    + W
Sbjct: 377  RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 434

Query: 1374 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 1550
            H RL H+N   + R+  + LIPK SI    KC  CVQ+KQPRKPHK+ ++  +  L L+H
Sbjct: 435  HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 494

Query: 1551 SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 1730
            SD+C+ N VLT+GG +YF+TFIDD +++CYVYL+  K    D FK YKAEVENQL++KIK
Sbjct: 495  SDLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIK 554

Query: 1731 ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 1910
             LRSD GGE+ S+E   FC+ HGI+HE+TP YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 555  RLRSDHGGEFFSNEFDLFCEEHGIIHEMTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 614

Query: 1911 PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKK 2018
            PK  WGEAL ++  +LNRVP +N DKTPYE+W  +K
Sbjct: 615  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRK 650



 Score =  103 bits (256), Expect(2) = e-121
 Identities = 73/303 (24%), Positives = 122/303 (40%), Gaps = 1/303 (0%)
 Frame = +1

Query: 109  KPEKFDGKNFLCWQQQMKFWLTELGLFSVILNGLKENGESSATKSAETPTSKDTTKEXXX 288
            +P+KF G +F  WQ ++  WLT +  F V        G+     +AE     +       
Sbjct: 9    RPDKFTGVHFKRWQIRVTLWLTAMKCFWV------STGKPEGVLTAEQQKQFEEATTLFV 62

Query: 289  XXXXXXXXXXXCHGRILSALSDSIYRIFSHTKSAFELWNALDYRYGTAEKGLKRVSIDDW 468
                         G ILS L D +  ++ H   A ELW+AL+ ++G  +       ++ +
Sbjct: 63   -------------GCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQF 109

Query: 469  LDFQMVDTKSVSDQLIEFENLIYDMKAKGVEQSDSVYVSSLIKKLPPSWSDFARGLKHKP 648
             D++M D +SV +Q  E + +  +++       D+     +I KLPPSW  F   LKHK 
Sbjct: 110  HDYKMADNRSVVEQAHEIQTMAKELELLKCVLPDNFVAGCIIAKLPPSWRSFGTALKHKR 169

Query: 649  ENFSLDELFVALRIEDRHRSSQQTKK-PVFQAKALIVENXXXXXXXXXXXXXXXXXXXXX 825
            + +S++ L  +L +E++ R      K    Q+ A +V                       
Sbjct: 170  QEYSVEGLIASLNVEEKAREKDAASKGDGGQSSANVVHK-------AQNKSKGKYKAQQT 222

Query: 826  XXXXXXXXXXXXXXXSQVQCWVCGRTNHIAKNCFHRHGQNNQSKPPPTSKPQANVVTVGA 1005
                            +  C+VCG+  H+A+ C  R G     K P     ++  VT+G 
Sbjct: 223  TNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGM----KAPAGQTSKSANVTIGN 278

Query: 1006 ASD 1014
              D
Sbjct: 279  TGD 281


>gb|AAV24814.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1289

 Score =  363 bits (933), Expect(2) = e-121
 Identities = 182/336 (54%), Positives = 236/336 (70%), Gaps = 1/336 (0%)
 Frame = +3

Query: 1014 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 1193
            F S QV+   TV MGNGS A V G G V L  +SGK++ L  V H+P I +NL+S S L 
Sbjct: 317  FSSYQVARGSTVLMGNGSQASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 376

Query: 1194 RNGYKVVFESNKVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIANVECCDTW 1373
            R+G+K+VFESNKVV+S+HG FIGKG+   GLFR S+              + +    + W
Sbjct: 377  RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 434

Query: 1374 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 1550
            H RL H+N   + R+  + LIPK SI    KC  CVQ+KQPRKPHK+ ++  +  L L+H
Sbjct: 435  HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 494

Query: 1551 SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 1730
            SD+C+ N VLT+GG +YF+TFIDD +++CYVYL+  K    D FK YKAEVENQL++KIK
Sbjct: 495  SDLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIK 554

Query: 1731 ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 1910
             LRSDRGGE+ S+E   FC+ HGI+HE TP YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 555  RLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 614

Query: 1911 PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKK 2018
            PK  WGEAL ++  +LNRVP +N DKTPYE+W ++K
Sbjct: 615  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIDRK 650



 Score =  101 bits (252), Expect(2) = e-121
 Identities = 73/303 (24%), Positives = 121/303 (39%), Gaps = 1/303 (0%)
 Frame = +1

Query: 109  KPEKFDGKNFLCWQQQMKFWLTELGLFSVILNGLKENGESSATKSAETPTSKDTTKEXXX 288
            +P+KF G +F  WQ ++  WLT +  F V        G+     +AE     +       
Sbjct: 9    RPDKFTGVHFKRWQIRVTLWLTAMKCFWV------STGKPEGVLTAEQQKQFEEATTLFV 62

Query: 289  XXXXXXXXXXXCHGRILSALSDSIYRIFSHTKSAFELWNALDYRYGTAEKGLKRVSIDDW 468
                         G ILS L D +  ++ H   A ELW+AL+ ++G  +       I+ +
Sbjct: 63   -------------GCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIIEQF 109

Query: 469  LDFQMVDTKSVSDQLIEFENLIYDMKAKGVEQSDSVYVSSLIKKLPPSWSDFARGLKHKP 648
             D++M D +SV +Q  E + +  +++ +     D      +I KLP SW  F   LKHK 
Sbjct: 110  HDYKMADNRSVIEQAHEIQTMAKELELRKCVLPDKFVAGCIIAKLPSSWRSFGTALKHKR 169

Query: 649  ENFSLDELFVALRIEDRHRSSQQTKK-PVFQAKALIVENXXXXXXXXXXXXXXXXXXXXX 825
            + +S++ L  +L +E++ R      K    Q+ A +V                       
Sbjct: 170  QEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHK-------AQNKSKGKYKAQQT 222

Query: 826  XXXXXXXXXXXXXXXSQVQCWVCGRTNHIAKNCFHRHGQNNQSKPPPTSKPQANVVTVGA 1005
                            +  C+VCG+  H+A+ C  R G     K P     ++  VT+G 
Sbjct: 223  TNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGM----KAPAGQTSKSANVTIGN 278

Query: 1006 ASD 1014
              D
Sbjct: 279  TGD 281


>emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group]
          Length = 1320

 Score =  363 bits (931), Expect(2) = e-121
 Identities = 182/336 (54%), Positives = 235/336 (69%), Gaps = 1/336 (0%)
 Frame = +3

Query: 1014 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 1193
            F S QV+   TV MGNGS A V G G V L  +SGK++ L  V H+P I +NL+S S L 
Sbjct: 317  FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 376

Query: 1194 RNGYKVVFESNKVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIANVECCDTW 1373
            R+G+K+VFESNKVV+S+HG FIGKG+   GLFR S+              + +    + W
Sbjct: 377  RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 434

Query: 1374 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 1550
            H RL H+N   + R+  + LIPK SI    KC  CVQ+KQPRKPHK+ ++  +  L L+H
Sbjct: 435  HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 494

Query: 1551 SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 1730
            SD+C+ N VLT+GG +YF+TFIDD +++CYVYL+  K    D FK YKAEVENQL++KIK
Sbjct: 495  SDLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIK 554

Query: 1731 ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 1910
             LRSDRGGE+ S+E   FC+ HGI+HE TP YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 555  RLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 614

Query: 1911 PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKK 2018
            PK  WGEAL ++  +LNRVP +N DKTPYE+W  +K
Sbjct: 615  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRK 650



 Score =  101 bits (252), Expect(2) = e-121
 Identities = 73/303 (24%), Positives = 121/303 (39%), Gaps = 1/303 (0%)
 Frame = +1

Query: 109  KPEKFDGKNFLCWQQQMKFWLTELGLFSVILNGLKENGESSATKSAETPTSKDTTKEXXX 288
            +P+KF G +F  WQ ++  WLT +  F V        G+     +AE     +       
Sbjct: 9    RPDKFTGVHFKRWQIRVTLWLTAMKCFWV------STGKPEGVLTAEQQKQFEEATTLFV 62

Query: 289  XXXXXXXXXXXCHGRILSALSDSIYRIFSHTKSAFELWNALDYRYGTAEKGLKRVSIDDW 468
                         G ILS L D +  ++ H   A ELW+AL+ ++G  +       ++ +
Sbjct: 63   -------------GCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQF 109

Query: 469  LDFQMVDTKSVSDQLIEFENLIYDMKAKGVEQSDSVYVSSLIKKLPPSWSDFARGLKHKP 648
             D++M D +SV +Q  E + +  +++       D      +I KLPPSW  F   LKHK 
Sbjct: 110  HDYKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKR 169

Query: 649  ENFSLDELFVALRIEDRHRSSQQTKK-PVFQAKALIVENXXXXXXXXXXXXXXXXXXXXX 825
            + +S++ L  +L +E++ R      K    Q+ A +V                       
Sbjct: 170  QEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHK-------AQNKSKGKYKAQQT 222

Query: 826  XXXXXXXXXXXXXXXSQVQCWVCGRTNHIAKNCFHRHGQNNQSKPPPTSKPQANVVTVGA 1005
                            +  C+VCG+  H+A+ C  R G     K P     ++  VT+G 
Sbjct: 223  TNFKKQKKNNNNPNQDERTCFVCGQIGHLARKCPQRKGM----KAPAGQTSKSANVTIGN 278

Query: 1006 ASD 1014
              D
Sbjct: 279  TGD 281


>gb|ABA91445.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  360 bits (925), Expect(2) = e-121
 Identities = 181/336 (53%), Positives = 234/336 (69%), Gaps = 1/336 (0%)
 Frame = +3

Query: 1014 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 1193
            F S QV+   TV MGNGS A V G G V L  +SGK++ L  V H+P I +NL+S S L 
Sbjct: 317  FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 376

Query: 1194 RNGYKVVFESNKVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIANVECCDTW 1373
            R+G+K+VFESNKVV+S+HG FIGKG+   GLFR S+              + +    + W
Sbjct: 377  RDGFKLVFESNKVVVSKHGYFIGKGYEYGGLFRFSLSDFCNKSVNHICGTVDDE--ANVW 434

Query: 1374 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 1550
            H RL H+N   + R+  + LIPK SI    KC  CVQ+KQPRKPHK+ ++  +  L L+H
Sbjct: 435  HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 494

Query: 1551 SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 1730
            SD+C+ N VLT+GG +YF+T IDD +++CYVYL+  K    D FK YKAEVENQL++KIK
Sbjct: 495  SDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIK 554

Query: 1731 ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 1910
             LRSDRGGE+ S+E   FC+ HGI+HE TP YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 555  RLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 614

Query: 1911 PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKK 2018
            PK  WGEAL ++  +LNRVP +N DKTPYE+W  +K
Sbjct: 615  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRK 650



 Score =  103 bits (256), Expect(2) = e-121
 Identities = 74/303 (24%), Positives = 122/303 (40%), Gaps = 1/303 (0%)
 Frame = +1

Query: 109  KPEKFDGKNFLCWQQQMKFWLTELGLFSVILNGLKENGESSATKSAETPTSKDTTKEXXX 288
            +P+KF G +F  WQ ++  WLT +  F V     +E   +   K  E  T+         
Sbjct: 9    RPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEEVLTAEQQKQFEEATTLFV------ 62

Query: 289  XXXXXXXXXXXCHGRILSALSDSIYRIFSHTKSAFELWNALDYRYGTAEKGLKRVSIDDW 468
                         G ILS L D +  ++ H   A ELW+AL+ ++G  +       ++ +
Sbjct: 63   -------------GCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQF 109

Query: 469  LDFQMVDTKSVSDQLIEFENLIYDMKAKGVEQSDSVYVSSLIKKLPPSWSDFARGLKHKP 648
             D++M D +SV +Q  E + +  +++       D      +I KLPPSW  F   LKHK 
Sbjct: 110  HDYKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKR 169

Query: 649  ENFSLDELFVALRIEDRHRSSQQTKK-PVFQAKALIVENXXXXXXXXXXXXXXXXXXXXX 825
            + +S++ L  +L +E++ R      K    Q+ A +V                       
Sbjct: 170  QEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHK-------AQNKSNGKYKAQQT 222

Query: 826  XXXXXXXXXXXXXXXSQVQCWVCGRTNHIAKNCFHRHGQNNQSKPPPTSKPQANVVTVGA 1005
                            +  C+VCG+  H+A+ C  R G     K P     ++  VT+G 
Sbjct: 223  TNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGM----KAPAGQTSKSANVTIGN 278

Query: 1006 ASD 1014
              D
Sbjct: 279  TGD 281


>gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
            Group]
          Length = 1911

 Score =  360 bits (925), Expect(2) = e-120
 Identities = 181/336 (53%), Positives = 234/336 (69%), Gaps = 1/336 (0%)
 Frame = +3

Query: 1014 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 1193
            F S QV+   TV MGNGS A V G G V L  +SGK++ L  V H+P I +NL+S S L 
Sbjct: 317  FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 376

Query: 1194 RNGYKVVFESNKVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIANVECCDTW 1373
            R+G+K+VFESNKVV+S+HG FIGKG+   GLFR S+              + +    + W
Sbjct: 377  RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 434

Query: 1374 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 1550
            H RL H+N   + R+  + LIPK SI    KC  CVQ+KQPRKPHK+ ++  +  L L+H
Sbjct: 435  HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 494

Query: 1551 SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 1730
            SD+C+ N VLT+GG +YF+T IDD +++CYVYL+  K    D FK YKAEVENQL++KIK
Sbjct: 495  SDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIK 554

Query: 1731 ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 1910
             LRSDRGGE+ S+E   FC+ HGI+HE TP YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 555  RLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 614

Query: 1911 PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKK 2018
            PK  WGEAL ++  +LNRVP +N DKTPYE+W  +K
Sbjct: 615  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRK 650



 Score =  102 bits (253), Expect(2) = e-120
 Identities = 73/303 (24%), Positives = 121/303 (39%), Gaps = 1/303 (0%)
 Frame = +1

Query: 109  KPEKFDGKNFLCWQQQMKFWLTELGLFSVILNGLKENGESSATKSAETPTSKDTTKEXXX 288
            +P+KF G +F  WQ ++  WLT +  F V        G+     +AE     +       
Sbjct: 9    RPDKFTGVHFKRWQIRVTLWLTAMKCFWV------STGKPEGVLTAEQQKQFEEATTLFV 62

Query: 289  XXXXXXXXXXXCHGRILSALSDSIYRIFSHTKSAFELWNALDYRYGTAEKGLKRVSIDDW 468
                         G ILS L D +  ++ H   A ELW+AL+ ++G  +       ++ +
Sbjct: 63   -------------GCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQF 109

Query: 469  LDFQMVDTKSVSDQLIEFENLIYDMKAKGVEQSDSVYVSSLIKKLPPSWSDFARGLKHKP 648
             D++M D +SV +Q  E + +  +++       D      +I KLPPSW  F   LKHK 
Sbjct: 110  HDYKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKR 169

Query: 649  ENFSLDELFVALRIEDRHRSSQQTKK-PVFQAKALIVENXXXXXXXXXXXXXXXXXXXXX 825
            + +S++ L  +L +E++ R      K    Q+ A +V                       
Sbjct: 170  QEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHK-------AQNKSKGKYKAQQT 222

Query: 826  XXXXXXXXXXXXXXXSQVQCWVCGRTNHIAKNCFHRHGQNNQSKPPPTSKPQANVVTVGA 1005
                            +  C+VCG+  H+A+ C  R G     K P     ++  VT+G 
Sbjct: 223  TNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGM----KAPAGQTSKSANVTIGN 278

Query: 1006 ASD 1014
              D
Sbjct: 279  TGD 281


>gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1518

 Score =  360 bits (925), Expect(2) = e-120
 Identities = 181/336 (53%), Positives = 234/336 (69%), Gaps = 1/336 (0%)
 Frame = +3

Query: 1014 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 1193
            F S QV+   TV MGNGS A V G G V L  +SGK++ L  V H+P I +NL+S S L 
Sbjct: 533  FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 592

Query: 1194 RNGYKVVFESNKVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIANVECCDTW 1373
            R+G+K+VFESNKVV+S+HG FIGKG+   GLFR S+              + +    + W
Sbjct: 593  RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 650

Query: 1374 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 1550
            H RL H+N   + R+  + LIPK SI    KC  CVQ+KQPRKPHK+ ++  +  L L+H
Sbjct: 651  HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 710

Query: 1551 SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 1730
            SD+C+ N VLT+GG +YF+T IDD +++CYVYL+  K    D FK YKAEVENQL++KIK
Sbjct: 711  SDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIK 770

Query: 1731 ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 1910
             LRSDRGGE+ S+E   FC+ HGI+HE TP YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 771  RLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 830

Query: 1911 PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKK 2018
            PK  WGEAL ++  +LNRVP +N DKTPYE+W  +K
Sbjct: 831  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRK 866



 Score =  102 bits (253), Expect(2) = e-120
 Identities = 73/303 (24%), Positives = 121/303 (39%), Gaps = 1/303 (0%)
 Frame = +1

Query: 109  KPEKFDGKNFLCWQQQMKFWLTELGLFSVILNGLKENGESSATKSAETPTSKDTTKEXXX 288
            +P+KF G +F  WQ ++  WLT +  F V        G+     +AE     +       
Sbjct: 225  RPDKFTGVHFKRWQIRVTLWLTAMKCFWV------STGKPEGVLTAEQQKQFEEATTLFV 278

Query: 289  XXXXXXXXXXXCHGRILSALSDSIYRIFSHTKSAFELWNALDYRYGTAEKGLKRVSIDDW 468
                         G ILS L D +  ++ H   A ELW+AL+ ++G  +       ++ +
Sbjct: 279  -------------GCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQF 325

Query: 469  LDFQMVDTKSVSDQLIEFENLIYDMKAKGVEQSDSVYVSSLIKKLPPSWSDFARGLKHKP 648
             D++M D +SV +Q  E + +  +++       D      +I KLPPSW  F   LKHK 
Sbjct: 326  HDYKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKR 385

Query: 649  ENFSLDELFVALRIEDRHRSSQQTKK-PVFQAKALIVENXXXXXXXXXXXXXXXXXXXXX 825
            + +S++ L  +L +E++ R      K    Q+ A +V                       
Sbjct: 386  QEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHK-------AQNKSKGKYKAQQT 438

Query: 826  XXXXXXXXXXXXXXXSQVQCWVCGRTNHIAKNCFHRHGQNNQSKPPPTSKPQANVVTVGA 1005
                            +  C+VCG+  H+A+ C  R G     K P     ++  VT+G 
Sbjct: 439  TNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGM----KAPAGQTSKSANVTIGN 494

Query: 1006 ASD 1014
              D
Sbjct: 495  TGD 497


>gb|ABF98943.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1460

 Score =  360 bits (925), Expect(2) = e-120
 Identities = 181/336 (53%), Positives = 234/336 (69%), Gaps = 1/336 (0%)
 Frame = +3

Query: 1014 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 1193
            F S QV+   TV MGNGS A V G G V L  +SGK++ L  V H+P I +NL+S S L 
Sbjct: 317  FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 376

Query: 1194 RNGYKVVFESNKVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIANVECCDTW 1373
            R+G+K+VFESNKVV+S+HG FIGKG+   GLFR S+              + +    + W
Sbjct: 377  RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 434

Query: 1374 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 1550
            H RL H+N   + R+  + LIPK SI    KC  CVQ+KQPRKPHK+ ++  +  L L+H
Sbjct: 435  HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 494

Query: 1551 SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 1730
            SD+C+ N VLT+GG +YF+T IDD +++CYVYL+  K    D FK YKAEVENQL++KIK
Sbjct: 495  SDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIK 554

Query: 1731 ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 1910
             LRSDRGGE+ S+E   FC+ HGI+HE TP YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 555  RLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 614

Query: 1911 PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKK 2018
            PK  WGEAL ++  +LNRVP +N DKTPYE+W  +K
Sbjct: 615  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRK 650



 Score =  102 bits (253), Expect(2) = e-120
 Identities = 73/303 (24%), Positives = 121/303 (39%), Gaps = 1/303 (0%)
 Frame = +1

Query: 109  KPEKFDGKNFLCWQQQMKFWLTELGLFSVILNGLKENGESSATKSAETPTSKDTTKEXXX 288
            +P+KF G +F  WQ ++  WLT +  F V        G+     +AE     +       
Sbjct: 9    RPDKFTGVHFKRWQIRVTLWLTAMKCFWV------STGKPEGVLTAEQQKQFEEATTLFV 62

Query: 289  XXXXXXXXXXXCHGRILSALSDSIYRIFSHTKSAFELWNALDYRYGTAEKGLKRVSIDDW 468
                         G ILS L D +  ++ H   A ELW+AL+ ++G  +       ++ +
Sbjct: 63   -------------GCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQF 109

Query: 469  LDFQMVDTKSVSDQLIEFENLIYDMKAKGVEQSDSVYVSSLIKKLPPSWSDFARGLKHKP 648
             D++M D +SV +Q  E + +  +++       D      +I KLPPSW  F   LKHK 
Sbjct: 110  HDYKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKR 169

Query: 649  ENFSLDELFVALRIEDRHRSSQQTKK-PVFQAKALIVENXXXXXXXXXXXXXXXXXXXXX 825
            + +S++ L  +L +E++ R      K    Q+ A +V                       
Sbjct: 170  QEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHK-------AQNKSKGKYKAQQT 222

Query: 826  XXXXXXXXXXXXXXXSQVQCWVCGRTNHIAKNCFHRHGQNNQSKPPPTSKPQANVVTVGA 1005
                            +  C+VCG+  H+A+ C  R G     K P     ++  VT+G 
Sbjct: 223  TNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGM----KAPAGQTSKSANVTIGN 278

Query: 1006 ASD 1014
              D
Sbjct: 279  TGD 281


>gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  360 bits (925), Expect(2) = e-120
 Identities = 181/336 (53%), Positives = 234/336 (69%), Gaps = 1/336 (0%)
 Frame = +3

Query: 1014 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 1193
            F S QV+   TV MGNGS A V G G V L  +SGK++ L  V H+P I +NL+S S L 
Sbjct: 317  FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 376

Query: 1194 RNGYKVVFESNKVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIANVECCDTW 1373
            R+G+K+VFESNKVV+S+HG FIGKG+   GLFR S+              + +    + W
Sbjct: 377  RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 434

Query: 1374 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 1550
            H RL H+N   + R+  + LIPK SI    KC  CVQ+KQPRKPHK+ ++  +  L L+H
Sbjct: 435  HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 494

Query: 1551 SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 1730
            SD+C+ N VLT+GG +YF+T IDD +++CYVYL+  K    D FK YKAEVENQL++KIK
Sbjct: 495  SDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIK 554

Query: 1731 ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 1910
             LRSDRGGE+ S+E   FC+ HGI+HE TP YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 555  RLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 614

Query: 1911 PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKK 2018
            PK  WGEAL ++  +LNRVP +N DKTPYE+W  +K
Sbjct: 615  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRK 650



 Score =  102 bits (253), Expect(2) = e-120
 Identities = 73/303 (24%), Positives = 121/303 (39%), Gaps = 1/303 (0%)
 Frame = +1

Query: 109  KPEKFDGKNFLCWQQQMKFWLTELGLFSVILNGLKENGESSATKSAETPTSKDTTKEXXX 288
            +P+KF G +F  WQ ++  WLT +  F V        G+     +AE     +       
Sbjct: 9    RPDKFTGVHFKRWQIRVTLWLTAMKCFWV------STGKPEGVLTAEQQKQFEEATTLFV 62

Query: 289  XXXXXXXXXXXCHGRILSALSDSIYRIFSHTKSAFELWNALDYRYGTAEKGLKRVSIDDW 468
                         G ILS L D +  ++ H   A ELW+AL+ ++G  +       ++ +
Sbjct: 63   -------------GCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQF 109

Query: 469  LDFQMVDTKSVSDQLIEFENLIYDMKAKGVEQSDSVYVSSLIKKLPPSWSDFARGLKHKP 648
             D++M D +SV +Q  E + +  +++       D      +I KLPPSW  F   LKHK 
Sbjct: 110  HDYKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKR 169

Query: 649  ENFSLDELFVALRIEDRHRSSQQTKK-PVFQAKALIVENXXXXXXXXXXXXXXXXXXXXX 825
            + +S++ L  +L +E++ R      K    Q+ A +V                       
Sbjct: 170  QEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHK-------AQNKSKGKYKAQQT 222

Query: 826  XXXXXXXXXXXXXXXSQVQCWVCGRTNHIAKNCFHRHGQNNQSKPPPTSKPQANVVTVGA 1005
                            +  C+VCG+  H+A+ C  R G     K P     ++  VT+G 
Sbjct: 223  TNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGM----KAPAGQTSKSANVTIGN 278

Query: 1006 ASD 1014
              D
Sbjct: 279  TGD 281


>gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  360 bits (925), Expect(2) = e-120
 Identities = 181/336 (53%), Positives = 234/336 (69%), Gaps = 1/336 (0%)
 Frame = +3

Query: 1014 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 1193
            F S QV+   TV MGNGS A V G G V L  +SGK++ L  V H+P I +NL+S S L 
Sbjct: 317  FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 376

Query: 1194 RNGYKVVFESNKVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIANVECCDTW 1373
            R+G+K+VFESNKVV+S+HG FIGKG+   GLFR S+              + +    + W
Sbjct: 377  RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 434

Query: 1374 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 1550
            H RL H+N   + R+  + LIPK SI    KC  CVQ+KQPRKPHK+ ++  +  L L+H
Sbjct: 435  HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 494

Query: 1551 SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 1730
            SD+C+ N VLT+GG +YF+T IDD +++CYVYL+  K    D FK YKAEVENQL++KIK
Sbjct: 495  SDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIK 554

Query: 1731 ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 1910
             LRSDRGGE+ S+E   FC+ HGI+HE TP YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 555  RLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 614

Query: 1911 PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKK 2018
            PK  WGEAL ++  +LNRVP +N DKTPYE+W  +K
Sbjct: 615  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRK 650



 Score =  102 bits (253), Expect(2) = e-120
 Identities = 73/303 (24%), Positives = 121/303 (39%), Gaps = 1/303 (0%)
 Frame = +1

Query: 109  KPEKFDGKNFLCWQQQMKFWLTELGLFSVILNGLKENGESSATKSAETPTSKDTTKEXXX 288
            +P+KF G +F  WQ ++  WLT +  F V        G+     +AE     +       
Sbjct: 9    RPDKFTGVHFKRWQIRVTLWLTAMKCFWV------STGKPEGVLTAEQQKQFEEATTLFV 62

Query: 289  XXXXXXXXXXXCHGRILSALSDSIYRIFSHTKSAFELWNALDYRYGTAEKGLKRVSIDDW 468
                         G ILS L D +  ++ H   A ELW+AL+ ++G  +       ++ +
Sbjct: 63   -------------GCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQF 109

Query: 469  LDFQMVDTKSVSDQLIEFENLIYDMKAKGVEQSDSVYVSSLIKKLPPSWSDFARGLKHKP 648
             D++M D +SV +Q  E + +  +++       D      +I KLPPSW  F   LKHK 
Sbjct: 110  HDYKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKR 169

Query: 649  ENFSLDELFVALRIEDRHRSSQQTKK-PVFQAKALIVENXXXXXXXXXXXXXXXXXXXXX 825
            + +S++ L  +L +E++ R      K    Q+ A +V                       
Sbjct: 170  QEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHK-------AQNKSKGKYKAQQT 222

Query: 826  XXXXXXXXXXXXXXXSQVQCWVCGRTNHIAKNCFHRHGQNNQSKPPPTSKPQANVVTVGA 1005
                            +  C+VCG+  H+A+ C  R G     K P     ++  VT+G 
Sbjct: 223  TNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGM----KAPAGQTSKSANVTIGN 278

Query: 1006 ASD 1014
              D
Sbjct: 279  TGD 281


>gb|AAT77367.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|51854387|gb|AAU10767.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1320

 Score =  360 bits (925), Expect(2) = e-120
 Identities = 181/336 (53%), Positives = 234/336 (69%), Gaps = 1/336 (0%)
 Frame = +3

Query: 1014 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 1193
            F S QV+   TV MGNGS A V G G V L  +SGK++ L  V H+P I +NL+S S L 
Sbjct: 317  FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 376

Query: 1194 RNGYKVVFESNKVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIANVECCDTW 1373
            R+G+K+VFESNKVV+S+HG FIGKG+   GLFR S+              + +    + W
Sbjct: 377  RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 434

Query: 1374 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 1550
            H RL H+N   + R+  + LIPK SI    KC  CVQ+KQPRKPHK+ ++  +  L L+H
Sbjct: 435  HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 494

Query: 1551 SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 1730
            SD+C+ N VLT+GG +YF+T IDD +++CYVYL+  K    D FK YKAEVENQL++KIK
Sbjct: 495  SDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIK 554

Query: 1731 ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 1910
             LRSDRGGE+ S+E   FC+ HGI+HE TP YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 555  RLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 614

Query: 1911 PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKK 2018
            PK  WGEAL ++  +LNRVP +N DKTPYE+W  +K
Sbjct: 615  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRK 650



 Score =  102 bits (253), Expect(2) = e-120
 Identities = 73/303 (24%), Positives = 121/303 (39%), Gaps = 1/303 (0%)
 Frame = +1

Query: 109  KPEKFDGKNFLCWQQQMKFWLTELGLFSVILNGLKENGESSATKSAETPTSKDTTKEXXX 288
            +P+KF G +F  WQ ++  WLT +  F V        G+     +AE     +       
Sbjct: 9    RPDKFTGVHFKRWQIRVTLWLTAMKCFWV------STGKPEGVLTAEQQKQFEEATTLFV 62

Query: 289  XXXXXXXXXXXCHGRILSALSDSIYRIFSHTKSAFELWNALDYRYGTAEKGLKRVSIDDW 468
                         G ILS L D +  ++ H   A ELW+AL+ ++G  +       ++ +
Sbjct: 63   -------------GCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQF 109

Query: 469  LDFQMVDTKSVSDQLIEFENLIYDMKAKGVEQSDSVYVSSLIKKLPPSWSDFARGLKHKP 648
             D++M D +SV +Q  E + +  +++       D      +I KLPPSW  F   LKHK 
Sbjct: 110  HDYKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKR 169

Query: 649  ENFSLDELFVALRIEDRHRSSQQTKK-PVFQAKALIVENXXXXXXXXXXXXXXXXXXXXX 825
            + +S++ L  +L +E++ R      K    Q+ A +V                       
Sbjct: 170  QEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHK-------AQNKSKGKYKAQQT 222

Query: 826  XXXXXXXXXXXXXXXSQVQCWVCGRTNHIAKNCFHRHGQNNQSKPPPTSKPQANVVTVGA 1005
                            +  C+VCG+  H+A+ C  R G     K P     ++  VT+G 
Sbjct: 223  TNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGM----KAPAGQTSKSANVTIGN 278

Query: 1006 ASD 1014
              D
Sbjct: 279  TGD 281


>gb|AAT69606.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53749238|gb|AAU90098.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1320

 Score =  360 bits (925), Expect(2) = e-120
 Identities = 181/336 (53%), Positives = 234/336 (69%), Gaps = 1/336 (0%)
 Frame = +3

Query: 1014 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 1193
            F S QV+   TV MGNGS A V G G V L  +SGK++ L  V H+P I +NL+S S L 
Sbjct: 317  FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 376

Query: 1194 RNGYKVVFESNKVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIANVECCDTW 1373
            R+G+K+VFESNKVV+S+HG FIGKG+   GLFR S+              + +    + W
Sbjct: 377  RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 434

Query: 1374 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 1550
            H RL H+N   + R+  + LIPK SI    KC  CVQ+KQPRKPHK+ ++  +  L L+H
Sbjct: 435  HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 494

Query: 1551 SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 1730
            SD+C+ N VLT+GG +YF+T IDD +++CYVYL+  K    D FK YKAEVENQL++KIK
Sbjct: 495  SDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIK 554

Query: 1731 ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 1910
             LRSDRGGE+ S+E   FC+ HGI+HE TP YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 555  RLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 614

Query: 1911 PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKK 2018
            PK  WGEAL ++  +LNRVP +N DKTPYE+W  +K
Sbjct: 615  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRK 650



 Score =  102 bits (253), Expect(2) = e-120
 Identities = 73/303 (24%), Positives = 121/303 (39%), Gaps = 1/303 (0%)
 Frame = +1

Query: 109  KPEKFDGKNFLCWQQQMKFWLTELGLFSVILNGLKENGESSATKSAETPTSKDTTKEXXX 288
            +P+KF G +F  WQ ++  WLT +  F V        G+     +AE     +       
Sbjct: 9    RPDKFTGVHFKRWQIRVTLWLTAMKCFWV------STGKPEGVLTAEQQKQFEEATTLFV 62

Query: 289  XXXXXXXXXXXCHGRILSALSDSIYRIFSHTKSAFELWNALDYRYGTAEKGLKRVSIDDW 468
                         G ILS L D +  ++ H   A ELW+AL+ ++G  +       ++ +
Sbjct: 63   -------------GCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQF 109

Query: 469  LDFQMVDTKSVSDQLIEFENLIYDMKAKGVEQSDSVYVSSLIKKLPPSWSDFARGLKHKP 648
             D++M D +SV +Q  E + +  +++       D      +I KLPPSW  F   LKHK 
Sbjct: 110  HDYKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKR 169

Query: 649  ENFSLDELFVALRIEDRHRSSQQTKK-PVFQAKALIVENXXXXXXXXXXXXXXXXXXXXX 825
            + +S++ L  +L +E++ R      K    Q+ A +V                       
Sbjct: 170  QEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHK-------AQNKSKGKYKAQQT 222

Query: 826  XXXXXXXXXXXXXXXSQVQCWVCGRTNHIAKNCFHRHGQNNQSKPPPTSKPQANVVTVGA 1005
                            +  C+VCG+  H+A+ C  R G     K P     ++  VT+G 
Sbjct: 223  TNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGM----KAPAGQTSKSANVTIGN 278

Query: 1006 ASD 1014
              D
Sbjct: 279  TGD 281


>gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  360 bits (925), Expect(2) = e-120
 Identities = 181/336 (53%), Positives = 234/336 (69%), Gaps = 1/336 (0%)
 Frame = +3

Query: 1014 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 1193
            F S QV+   TV MGNGS A V G G V L  +SGK++ L  V H+P I +NL+S S L 
Sbjct: 317  FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 376

Query: 1194 RNGYKVVFESNKVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIANVECCDTW 1373
            R+G+K+VFESNKVV+S+HG FIGKG+   GLFR S+              + +    + W
Sbjct: 377  RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 434

Query: 1374 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 1550
            H RL H+N   + R+  + LIPK SI    KC  CVQ+KQPRKPHK+ ++  +  L L+H
Sbjct: 435  HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 494

Query: 1551 SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 1730
            SD+C+ N VLT+GG +YF+T IDD +++CYVYL+  K    D FK YKAEVENQL++KIK
Sbjct: 495  SDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIK 554

Query: 1731 ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 1910
             LRSDRGGE+ S+E   FC+ HGI+HE TP YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 555  RLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 614

Query: 1911 PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKK 2018
            PK  WGEAL ++  +LNRVP +N DKTPYE+W  +K
Sbjct: 615  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRK 650



 Score =  102 bits (253), Expect(2) = e-120
 Identities = 73/303 (24%), Positives = 121/303 (39%), Gaps = 1/303 (0%)
 Frame = +1

Query: 109  KPEKFDGKNFLCWQQQMKFWLTELGLFSVILNGLKENGESSATKSAETPTSKDTTKEXXX 288
            +P+KF G +F  WQ ++  WLT +  F V        G+     +AE     +       
Sbjct: 9    RPDKFTGVHFKRWQIRVTLWLTAMKCFWV------STGKPEGVLTAEQQKQFEEATTLFV 62

Query: 289  XXXXXXXXXXXCHGRILSALSDSIYRIFSHTKSAFELWNALDYRYGTAEKGLKRVSIDDW 468
                         G ILS L D +  ++ H   A ELW+AL+ ++G  +       ++ +
Sbjct: 63   -------------GCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQF 109

Query: 469  LDFQMVDTKSVSDQLIEFENLIYDMKAKGVEQSDSVYVSSLIKKLPPSWSDFARGLKHKP 648
             D++M D +SV +Q  E + +  +++       D      +I KLPPSW  F   LKHK 
Sbjct: 110  HDYKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKR 169

Query: 649  ENFSLDELFVALRIEDRHRSSQQTKK-PVFQAKALIVENXXXXXXXXXXXXXXXXXXXXX 825
            + +S++ L  +L +E++ R      K    Q+ A +V                       
Sbjct: 170  QEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHK-------AQNKSKGKYKAQQT 222

Query: 826  XXXXXXXXXXXXXXXSQVQCWVCGRTNHIAKNCFHRHGQNNQSKPPPTSKPQANVVTVGA 1005
                            +  C+VCG+  H+A+ C  R G     K P     ++  VT+G 
Sbjct: 223  TNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGM----KAPAGQTSKSANVTIGN 278

Query: 1006 ASD 1014
              D
Sbjct: 279  TGD 281


>gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1302

 Score =  360 bits (925), Expect(2) = e-120
 Identities = 181/336 (53%), Positives = 234/336 (69%), Gaps = 1/336 (0%)
 Frame = +3

Query: 1014 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 1193
            F S QV+   TV MGNGS A V G G V L  +SGK++ L  V H+P I +NL+S S L 
Sbjct: 317  FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 376

Query: 1194 RNGYKVVFESNKVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIANVECCDTW 1373
            R+G+K+VFESNKVV+S+HG FIGKG+   GLFR S+              + +    + W
Sbjct: 377  RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 434

Query: 1374 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 1550
            H RL H+N   + R+  + LIPK SI    KC  CVQ+KQPRKPHK+ ++  +  L L+H
Sbjct: 435  HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 494

Query: 1551 SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 1730
            SD+C+ N VLT+GG +YF+T IDD +++CYVYL+  K    D FK YKAEVENQL++KIK
Sbjct: 495  SDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIK 554

Query: 1731 ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 1910
             LRSDRGGE+ S+E   FC+ HGI+HE TP YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 555  RLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 614

Query: 1911 PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKK 2018
            PK  WGEAL ++  +LNRVP +N DKTPYE+W  +K
Sbjct: 615  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRK 650



 Score =  102 bits (253), Expect(2) = e-120
 Identities = 73/303 (24%), Positives = 121/303 (39%), Gaps = 1/303 (0%)
 Frame = +1

Query: 109  KPEKFDGKNFLCWQQQMKFWLTELGLFSVILNGLKENGESSATKSAETPTSKDTTKEXXX 288
            +P+KF G +F  WQ ++  WLT +  F V        G+     +AE     +       
Sbjct: 9    RPDKFTGVHFKRWQIRVTLWLTAMKCFWV------STGKPEGVLTAEQQKQFEEATTLFV 62

Query: 289  XXXXXXXXXXXCHGRILSALSDSIYRIFSHTKSAFELWNALDYRYGTAEKGLKRVSIDDW 468
                         G ILS L D +  ++ H   A ELW+AL+ ++G  +       ++ +
Sbjct: 63   -------------GCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQF 109

Query: 469  LDFQMVDTKSVSDQLIEFENLIYDMKAKGVEQSDSVYVSSLIKKLPPSWSDFARGLKHKP 648
             D++M D +SV +Q  E + +  +++       D      +I KLPPSW  F   LKHK 
Sbjct: 110  HDYKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKR 169

Query: 649  ENFSLDELFVALRIEDRHRSSQQTKK-PVFQAKALIVENXXXXXXXXXXXXXXXXXXXXX 825
            + +S++ L  +L +E++ R      K    Q+ A +V                       
Sbjct: 170  QEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHK-------AQNKSKGKYKAQQT 222

Query: 826  XXXXXXXXXXXXXXXSQVQCWVCGRTNHIAKNCFHRHGQNNQSKPPPTSKPQANVVTVGA 1005
                            +  C+VCG+  H+A+ C  R G     K P     ++  VT+G 
Sbjct: 223  TNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGM----KAPAGQTSKSANVTIGN 278

Query: 1006 ASD 1014
              D
Sbjct: 279  TGD 281


>gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  360 bits (925), Expect(2) = e-120
 Identities = 181/336 (53%), Positives = 234/336 (69%), Gaps = 1/336 (0%)
 Frame = +3

Query: 1014 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 1193
            F S QV+   TV MGNGS A V G G V L  +SGK++ L  V H+P I +NL+S S L 
Sbjct: 317  FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 376

Query: 1194 RNGYKVVFESNKVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIANVECCDTW 1373
            R+G+K+VFESNKVV+S+HG FIGKG+   GLFR S+              + +    + W
Sbjct: 377  RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 434

Query: 1374 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 1550
            H RL H+N   + R+  + LIPK SI    KC  CVQ+KQPRKPHK+ ++  +  L L+H
Sbjct: 435  HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 494

Query: 1551 SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 1730
            SD+C+ N VLT+GG +YF+T IDD +++CYVYL+  K    D FK YKAEVENQL++KIK
Sbjct: 495  SDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIK 554

Query: 1731 ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 1910
             LRSDRGGE+ S+E   FC+ HGI+HE TP YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 555  RLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 614

Query: 1911 PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKK 2018
            PK  WGEAL ++  +LNRVP +N DKTPYE+W  +K
Sbjct: 615  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRK 650



 Score =  102 bits (253), Expect(2) = e-120
 Identities = 73/303 (24%), Positives = 121/303 (39%), Gaps = 1/303 (0%)
 Frame = +1

Query: 109  KPEKFDGKNFLCWQQQMKFWLTELGLFSVILNGLKENGESSATKSAETPTSKDTTKEXXX 288
            +P+KF G +F  WQ ++  WLT +  F V        G+     +AE     +       
Sbjct: 9    RPDKFTGVHFKRWQIRVTLWLTAMKCFWV------STGKPEGVLTAEQQKQFEEATTLFV 62

Query: 289  XXXXXXXXXXXCHGRILSALSDSIYRIFSHTKSAFELWNALDYRYGTAEKGLKRVSIDDW 468
                         G ILS L D +  ++ H   A ELW+AL+ ++G  +       ++ +
Sbjct: 63   -------------GCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQF 109

Query: 469  LDFQMVDTKSVSDQLIEFENLIYDMKAKGVEQSDSVYVSSLIKKLPPSWSDFARGLKHKP 648
             D++M D +SV +Q  E + +  +++       D      +I KLPPSW  F   LKHK 
Sbjct: 110  HDYKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKR 169

Query: 649  ENFSLDELFVALRIEDRHRSSQQTKK-PVFQAKALIVENXXXXXXXXXXXXXXXXXXXXX 825
            + +S++ L  +L +E++ R      K    Q+ A +V                       
Sbjct: 170  QEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHK-------AQNKSKGKYKAQQT 222

Query: 826  XXXXXXXXXXXXXXXSQVQCWVCGRTNHIAKNCFHRHGQNNQSKPPPTSKPQANVVTVGA 1005
                            +  C+VCG+  H+A+ C  R G     K P     ++  VT+G 
Sbjct: 223  TNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGM----KAPAGQTSKSANVTIGN 278

Query: 1006 ASD 1014
              D
Sbjct: 279  TGD 281


>gb|AAX92828.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|62733724|gb|AAX95834.1|
            retrotransposon protein, putative, Ty1-copia sub-class
            [Oryza sativa Japonica Group] gi|77550359|gb|ABA93156.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1277

 Score =  360 bits (925), Expect(2) = e-120
 Identities = 181/336 (53%), Positives = 234/336 (69%), Gaps = 1/336 (0%)
 Frame = +3

Query: 1014 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 1193
            F S QV+   TV MGNGS A V G G V L  +SGK++ L  V H+P I +NL+S S L 
Sbjct: 317  FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 376

Query: 1194 RNGYKVVFESNKVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIANVECCDTW 1373
            R+G+K+VFESNKVV+S+HG FIGKG+   GLFR S+              + +    + W
Sbjct: 377  RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 434

Query: 1374 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 1550
            H RL H+N   + R+  + LIPK SI    KC  CVQ+KQPRKPHK+ ++  +  L L+H
Sbjct: 435  HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLASLELLH 494

Query: 1551 SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 1730
            SD+C+ N VLT+GG +YF+T IDD +++CYVYL+  K    D FK YKAEVENQL++KIK
Sbjct: 495  SDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIK 554

Query: 1731 ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 1910
             LRSDRGGE+ S+E   FC+ HGI+HE TP YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 555  RLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 614

Query: 1911 PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKK 2018
            PK  WGEAL ++  +LNRVP +N DKTPYE+W  +K
Sbjct: 615  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRK 650



 Score =  102 bits (253), Expect(2) = e-120
 Identities = 73/303 (24%), Positives = 121/303 (39%), Gaps = 1/303 (0%)
 Frame = +1

Query: 109  KPEKFDGKNFLCWQQQMKFWLTELGLFSVILNGLKENGESSATKSAETPTSKDTTKEXXX 288
            +P+KF G +F  WQ ++  WLT +  F V        G+     +AE     +       
Sbjct: 9    RPDKFTGVHFKRWQIRVTLWLTAMKCFWV------STGKPEGVLTAEQQKQFEEATTLFV 62

Query: 289  XXXXXXXXXXXCHGRILSALSDSIYRIFSHTKSAFELWNALDYRYGTAEKGLKRVSIDDW 468
                         G ILS L D +  ++ H   A ELW+AL+ ++G  +       ++ +
Sbjct: 63   -------------GCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQF 109

Query: 469  LDFQMVDTKSVSDQLIEFENLIYDMKAKGVEQSDSVYVSSLIKKLPPSWSDFARGLKHKP 648
             D++M D +SV +Q  E + +  +++       D      +I KLPPSW  F   LKHK 
Sbjct: 110  HDYKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKR 169

Query: 649  ENFSLDELFVALRIEDRHRSSQQTKK-PVFQAKALIVENXXXXXXXXXXXXXXXXXXXXX 825
            + +S++ L  +L +E++ R      K    Q+ A +V                       
Sbjct: 170  QEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHK-------AQNKSKGKYKAQQT 222

Query: 826  XXXXXXXXXXXXXXXSQVQCWVCGRTNHIAKNCFHRHGQNNQSKPPPTSKPQANVVTVGA 1005
                            +  C+VCG+  H+A+ C  R G     K P     ++  VT+G 
Sbjct: 223  TNFKKQKKNKNNPNQDERTCFVCGQVGHLARKCPQRKGM----KAPAGQTSKSANVTIGN 278

Query: 1006 ASD 1014
              D
Sbjct: 279  TGD 281


>gb|ABF98853.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  360 bits (925), Expect(2) = e-120
 Identities = 181/336 (53%), Positives = 234/336 (69%), Gaps = 1/336 (0%)
 Frame = +3

Query: 1014 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 1193
            F S QV+   TV MGNGS A V G G V L  +SGK++ L  V H+P I +NL+S S L 
Sbjct: 317  FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 376

Query: 1194 RNGYKVVFESNKVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIANVECCDTW 1373
            R+G+K+VFESNKVV+S+HG FIGKG+   GLFR S+              + +    + W
Sbjct: 377  RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 434

Query: 1374 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 1550
            H RL H+N   + R+  + LIPK SI    KC  CVQ+KQPRKPHK+ ++  +  L L+H
Sbjct: 435  HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 494

Query: 1551 SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 1730
            SD+C+ N VLT+GG +YF+T IDD +++CYVYL+  K    D FK YKAEVENQL++KIK
Sbjct: 495  SDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIK 554

Query: 1731 ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 1910
             LRSDRGGE+ S+E   FC+ HGI+HE TP YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 555  RLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 614

Query: 1911 PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKK 2018
            PK  WGEAL ++  +LNRVP +N DKTPYE+W  +K
Sbjct: 615  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRK 650



 Score =  101 bits (252), Expect(2) = e-120
 Identities = 73/303 (24%), Positives = 121/303 (39%), Gaps = 1/303 (0%)
 Frame = +1

Query: 109  KPEKFDGKNFLCWQQQMKFWLTELGLFSVILNGLKENGESSATKSAETPTSKDTTKEXXX 288
            +P+KF G +F  WQ ++  WLT +  F V        G+     +AE     +       
Sbjct: 9    RPDKFTGVHFKRWQIRVTLWLTAMKCFWV------STGKPEGILTAEQQKQFEEATTLFV 62

Query: 289  XXXXXXXXXXXCHGRILSALSDSIYRIFSHTKSAFELWNALDYRYGTAEKGLKRVSIDDW 468
                         G ILS L D +  ++ H   A ELW+AL+ ++G  +       ++ +
Sbjct: 63   -------------GCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQF 109

Query: 469  LDFQMVDTKSVSDQLIEFENLIYDMKAKGVEQSDSVYVSSLIKKLPPSWSDFARGLKHKP 648
             D++M D +SV +Q  E + +  +++       D      +I KLPPSW  F   LKHK 
Sbjct: 110  HDYKMADNRSVVEQAQEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKR 169

Query: 649  ENFSLDELFVALRIEDRHRSSQQTKK-PVFQAKALIVENXXXXXXXXXXXXXXXXXXXXX 825
            + +S++ L  +L +E++ R      K    Q+ A +V                       
Sbjct: 170  QEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHK-------AQNKSKGKYKAQQT 222

Query: 826  XXXXXXXXXXXXXXXSQVQCWVCGRTNHIAKNCFHRHGQNNQSKPPPTSKPQANVVTVGA 1005
                            +  C+VCG+  H+A+ C  R G     K P     ++  VT+G 
Sbjct: 223  TNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGM----KAPAGQTSKSANVTIGN 278

Query: 1006 ASD 1014
              D
Sbjct: 279  TGD 281


>gb|AAK71544.1|AC087852_4 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1308

 Score =  360 bits (925), Expect(2) = e-120
 Identities = 181/336 (53%), Positives = 234/336 (69%), Gaps = 1/336 (0%)
 Frame = +3

Query: 1014 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 1193
            F S QV+   TV MGNGS A V G G V L  +SGK++ L  V H+P I +NL+S S L 
Sbjct: 317  FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 376

Query: 1194 RNGYKVVFESNKVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIANVECCDTW 1373
            R+G+K+VFESNKVV+S+HG FIGKG+   GLFR S+              + +    + W
Sbjct: 377  RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 434

Query: 1374 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 1550
            H RL H+N   + R+  + LIPK SI    KC  CVQ+KQPRKPHK+ ++  +  L L+H
Sbjct: 435  HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 494

Query: 1551 SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 1730
            SD+C+ N VLT+GG +YF+T IDD +++CYVYL+  K    D FK YKAEVENQL++KIK
Sbjct: 495  SDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIK 554

Query: 1731 ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 1910
             LRSDRGGE+ S+E   FC+ HGI+HE TP YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 555  RLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 614

Query: 1911 PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKK 2018
            PK  WGEAL ++  +LNRVP +N DKTPYE+W  +K
Sbjct: 615  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRK 650



 Score =  101 bits (252), Expect(2) = e-120
 Identities = 73/303 (24%), Positives = 121/303 (39%), Gaps = 1/303 (0%)
 Frame = +1

Query: 109  KPEKFDGKNFLCWQQQMKFWLTELGLFSVILNGLKENGESSATKSAETPTSKDTTKEXXX 288
            +P+KF G +F  WQ ++  WLT +  F V        G+     +AE     +       
Sbjct: 9    RPDKFTGVHFKRWQIRVTLWLTAMKCFWV------STGKPEGILTAEQQKQFEEATTLFV 62

Query: 289  XXXXXXXXXXXCHGRILSALSDSIYRIFSHTKSAFELWNALDYRYGTAEKGLKRVSIDDW 468
                         G ILS L D +  ++ H   A ELW+AL+ ++G  +       ++ +
Sbjct: 63   -------------GCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQF 109

Query: 469  LDFQMVDTKSVSDQLIEFENLIYDMKAKGVEQSDSVYVSSLIKKLPPSWSDFARGLKHKP 648
             D++M D +SV +Q  E + +  +++       D      +I KLPPSW  F   LKHK 
Sbjct: 110  HDYKMADNRSVVEQAQEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKR 169

Query: 649  ENFSLDELFVALRIEDRHRSSQQTKK-PVFQAKALIVENXXXXXXXXXXXXXXXXXXXXX 825
            + +S++ L  +L +E++ R      K    Q+ A +V                       
Sbjct: 170  QEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHK-------AQNKSKGKYKAQQT 222

Query: 826  XXXXXXXXXXXXXXXSQVQCWVCGRTNHIAKNCFHRHGQNNQSKPPPTSKPQANVVTVGA 1005
                            +  C+VCG+  H+A+ C  R G     K P     ++  VT+G 
Sbjct: 223  TNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGM----KAPAGQTSKSANVTIGN 278

Query: 1006 ASD 1014
              D
Sbjct: 279  TGD 281


>gb|ABA96779.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1468

 Score =  361 bits (927), Expect(2) = e-120
 Identities = 181/336 (53%), Positives = 234/336 (69%), Gaps = 1/336 (0%)
 Frame = +3

Query: 1014 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 1193
            F S QV+   TV MGNGS A V G G V L  +SGK++ L  V H+P I +NL+S S L 
Sbjct: 404  FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 463

Query: 1194 RNGYKVVFESNKVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIANVECCDTW 1373
            R+G+K+VFESNKVV+S+HG FIGKG+   GLFR S+              + +    + W
Sbjct: 464  RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 521

Query: 1374 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 1550
            H RL H+N   + R+  + LIPK SI    KC  CVQ+KQPRKPHK+ ++  +  L L+H
Sbjct: 522  HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 581

Query: 1551 SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 1730
            SD+C+ N VLT+GG +YF+T IDD +++CYVYL+  K    D FK YKAEVENQL++KIK
Sbjct: 582  SDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIK 641

Query: 1731 ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 1910
             LRSDRGGE+ S+E   FC+ HGI+HE TP YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 642  RLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 701

Query: 1911 PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKK 2018
            PK  WGEAL ++  +LNRVP +N DKTPYE+W  +K
Sbjct: 702  PKTWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRK 737



 Score =  100 bits (249), Expect(2) = e-120
 Identities = 72/303 (23%), Positives = 120/303 (39%), Gaps = 1/303 (0%)
 Frame = +1

Query: 109  KPEKFDGKNFLCWQQQMKFWLTELGLFSVILNGLKENGESSATKSAETPTSKDTTKEXXX 288
            +P+KF G +F  WQ ++  WLT +  F V        G+     +AE     +       
Sbjct: 96   RPDKFTGVHFKRWQIRVTLWLTAMKCFWV------STGKPEGVLTAEQQKQFEEATTLFV 149

Query: 289  XXXXXXXXXXXCHGRILSALSDSIYRIFSHTKSAFELWNALDYRYGTAEKGLKRVSIDDW 468
                         G ILS L D +  ++ H   A ELW+AL+ ++G  +       ++ +
Sbjct: 150  -------------GCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQF 196

Query: 469  LDFQMVDTKSVSDQLIEFENLIYDMKAKGVEQSDSVYVSSLIKKLPPSWSDFARGLKHKP 648
             D++M D +SV +Q  E + +  +++       D      +I KLPPSW  F   LKHK 
Sbjct: 197  HDYKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKR 256

Query: 649  ENFSLDELFVALRIEDRHRSSQQTKK-PVFQAKALIVENXXXXXXXXXXXXXXXXXXXXX 825
            + +S++ L  +L +E++ R      K    Q+ A +V                       
Sbjct: 257  QEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHK-------AQNKSKGKYKAQQT 309

Query: 826  XXXXXXXXXXXXXXXSQVQCWVCGRTNHIAKNCFHRHGQNNQSKPPPTSKPQANVVTVGA 1005
                            +  C+VCG+  H+A+ C    G     K P     ++  VT+G 
Sbjct: 310  TNFKKQKKNNINPNQDERTCFVCGQVGHLARKCLQCKGM----KAPAGQTSKSANVTIGN 365

Query: 1006 ASD 1014
              D
Sbjct: 366  TGD 368


>gb|ABA99836.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1302

 Score =  360 bits (924), Expect(2) = e-120
 Identities = 181/336 (53%), Positives = 234/336 (69%), Gaps = 1/336 (0%)
 Frame = +3

Query: 1014 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 1193
            F S QV+   TV MGNGS A V G G V L  +SGK++ L  V H+P I +NL+S S L 
Sbjct: 317  FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 376

Query: 1194 RNGYKVVFESNKVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIANVECCDTW 1373
            R+G+K+VFESNKVV+S+HG FIGKG+   GLFR S+              + +    + W
Sbjct: 377  RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 434

Query: 1374 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 1550
            H RL H+N   + R+  + LIPK SI    KC  CVQ+KQPRKPHK+ ++  +  L L+H
Sbjct: 435  HSRLCHINFVLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 494

Query: 1551 SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 1730
            SD+C+ N VLT+GG +YF+T IDD +++CYVYL+  K    D FK YKAEVENQL++KIK
Sbjct: 495  SDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIK 554

Query: 1731 ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 1910
             LRSDRGGE+ S+E   FC+ HGI+HE TP YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 555  RLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 614

Query: 1911 PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKK 2018
            PK  WGEAL ++  +LNRVP +N DKTPYE+W  +K
Sbjct: 615  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRK 650



 Score =  101 bits (252), Expect(2) = e-120
 Identities = 73/303 (24%), Positives = 121/303 (39%), Gaps = 1/303 (0%)
 Frame = +1

Query: 109  KPEKFDGKNFLCWQQQMKFWLTELGLFSVILNGLKENGESSATKSAETPTSKDTTKEXXX 288
            +P+KF G +F  WQ ++  WLT +  F V        G+     +AE     +       
Sbjct: 9    RPDKFTGVHFKRWQIRVTLWLTAMKCFWV------STGKPEGVLTAEQQKQFEEATTLFV 62

Query: 289  XXXXXXXXXXXCHGRILSALSDSIYRIFSHTKSAFELWNALDYRYGTAEKGLKRVSIDDW 468
                         G ILS L D +  ++ H   A ELW+AL+ ++G  +       ++ +
Sbjct: 63   -------------GCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQF 109

Query: 469  LDFQMVDTKSVSDQLIEFENLIYDMKAKGVEQSDSVYVSSLIKKLPPSWSDFARGLKHKP 648
             D++M D +SV +Q  E + +  +++       D      +I KLPPSW  F   LKHK 
Sbjct: 110  HDYKMADNRSVVEQAHEIKTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGAALKHKR 169

Query: 649  ENFSLDELFVALRIEDRHRSSQQTKK-PVFQAKALIVENXXXXXXXXXXXXXXXXXXXXX 825
            + +S++ L  +L +E++ R      K    Q+ A +V                       
Sbjct: 170  QEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHK-------AQNKSKGKYKAQQT 222

Query: 826  XXXXXXXXXXXXXXXSQVQCWVCGRTNHIAKNCFHRHGQNNQSKPPPTSKPQANVVTVGA 1005
                            +  C+VCG+  H+A+ C  R G     K P     ++  VT+G 
Sbjct: 223  TNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGM----KAPAGQTSKSANVTIGN 278

Query: 1006 ASD 1014
              D
Sbjct: 279  TGD 281


>emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]
          Length = 1302

 Score =  360 bits (923), Expect(2) = e-120
 Identities = 180/336 (53%), Positives = 233/336 (69%), Gaps = 1/336 (0%)
 Frame = +3

Query: 1014 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 1193
            F S QV+   TV MGNGS A V G G V L  +SGK++ L  V H+P I +NL+S S L 
Sbjct: 317  FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 376

Query: 1194 RNGYKVVFESNKVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIANVECCDTW 1373
            R+G+K+VFESNKVV+S+HG FIGKG+   GLFR S+              + +    + W
Sbjct: 377  RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 434

Query: 1374 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 1550
            H RL H+N   + R+  + LIPK SI    KC  CVQ+KQPRKPHK+  +  +  L L+H
Sbjct: 435  HSRLCHINFGLMSRLSSMCLIPKFSIVKSSKCHSCVQSKQPRKPHKAAKERNLAPLELLH 494

Query: 1551 SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 1730
            SD+C+ N VLT+GG +YF+T IDD +++CYVYL+  K    D FK YKAE+ENQL++KIK
Sbjct: 495  SDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEIENQLDRKIK 554

Query: 1731 ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 1910
             LRSDRGGE+ S+E   FC+ HGI+HE TP YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 555  RLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 614

Query: 1911 PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKK 2018
            PK  WGEAL ++  +LNRVP +N DKTPYE+W  +K
Sbjct: 615  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRK 650



 Score =  102 bits (253), Expect(2) = e-120
 Identities = 73/303 (24%), Positives = 121/303 (39%), Gaps = 1/303 (0%)
 Frame = +1

Query: 109  KPEKFDGKNFLCWQQQMKFWLTELGLFSVILNGLKENGESSATKSAETPTSKDTTKEXXX 288
            +P+KF G +F  WQ ++  WLT +  F V        G+     +AE     +       
Sbjct: 9    RPDKFTGVHFKRWQIRVTLWLTAMKCFWV------STGKPEGVLTAEQQKQFEEATTLFV 62

Query: 289  XXXXXXXXXXXCHGRILSALSDSIYRIFSHTKSAFELWNALDYRYGTAEKGLKRVSIDDW 468
                         G ILS L D +  ++ H   A ELW+AL+ ++G  +       ++ +
Sbjct: 63   -------------GCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQF 109

Query: 469  LDFQMVDTKSVSDQLIEFENLIYDMKAKGVEQSDSVYVSSLIKKLPPSWSDFARGLKHKP 648
             D++M D +SV +Q  E + +  +++       D      +I KLPPSW  F   LKHK 
Sbjct: 110  HDYKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKR 169

Query: 649  ENFSLDELFVALRIEDRHRSSQQTKK-PVFQAKALIVENXXXXXXXXXXXXXXXXXXXXX 825
            + +S++ L  +L +E++ R      K    Q+ A +V                       
Sbjct: 170  QEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHK-------AQNKSKGKYKAQQT 222

Query: 826  XXXXXXXXXXXXXXXSQVQCWVCGRTNHIAKNCFHRHGQNNQSKPPPTSKPQANVVTVGA 1005
                            +  C+VCG+  H+A+ C  R G     K P     ++  VT+G 
Sbjct: 223  TNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGM----KAPAGQTSKSANVTIGN 278

Query: 1006 ASD 1014
              D
Sbjct: 279  TGD 281