BLASTX nr result

ID: Rehmannia25_contig00013550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00013550
         (1211 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004247681.1| PREDICTED: putative F-box/LRR-repeat protein...    61   8e-07
gb|EXB34850.1| Putative F-box/LRR-repeat protein [Morus notabilis]     60   2e-06

>ref|XP_004247681.1| PREDICTED: putative F-box/LRR-repeat protein At5g02700-like [Solanum
            lycopersicum]
          Length = 470

 Score = 61.2 bits (147), Expect = 8e-07
 Identities = 55/239 (23%), Positives = 108/239 (45%), Gaps = 3/239 (1%)
 Frame = -3

Query: 1203 VYIGDDVVWDIISSCPLIEKFLLSDCQCLIDSETPIFARWMNKVLALKSPLMKSREFHNL 1024
            ++I   ++  +++SCP I+ F L  C  L+  E     +  +  L++        E  +L
Sbjct: 171  IFISKKLLQTLLNSCPFIDSFTLDRCSGLVKIELMNLQKLKSVSLSINRNQRVRIEAPSL 230

Query: 1023 KSLFLDRIHIDDNLFSRDFSLKFPCLVELT-LRRCNGNIGIQIS-SPSLECISLEQMMMF 850
            + LF +     + +     +LK    +EL+ ++ CNG +   IS S SLE + ++  +  
Sbjct: 231  EHLFYNGYLSRNLVVVGCHNLKS---LELSYVKICNGFLDDIISGSQSLEVLKIQYCLGI 287

Query: 849  KVKFDVPNIHKFKXXXXXXXXXXXXXXSREWLSEISIWHSCQHLGASWFLKLKRFLTR-L 673
              + +  N+   +              S        + H   +L A+WF  L++ L+  +
Sbjct: 288  S-QIETSNLVSLEYIGYQIPELKIAKESSRLKHSKIVLHGNNNLDAAWFSMLRKLLSNPI 346

Query: 672  SQSKISLSIVFFSEMHIGDVGDIRGLPRPVVENLMLSIYSSSSDCSALLDGLFWSFRPK 496
            S S++ L    ++E+ + D+    G+  P V+ L ++I  S  +CS  +D L WS  P+
Sbjct: 347  SWSQVLLCFPEYNEIEMRDLQQHHGVASPRVDVLNVNIMRSYGECSTFVDALLWSCNPR 405


>gb|EXB34850.1| Putative F-box/LRR-repeat protein [Morus notabilis]
          Length = 518

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 68/277 (24%), Positives = 122/277 (44%), Gaps = 7/277 (2%)
 Frame = -3

Query: 1032 HNLKSLFLDRIHIDDNLFSRDFSLKFPCLVELTLRRCNGNIGIQISSPSLECISL---EQ 862
            H LK+L L +  I D+ F    S +F  L +L +  C     I+IS   L+ + L   E+
Sbjct: 250  HLLKTLHLSKCGITDDSFHSHLS-RFSLLEDLEISDCRMLRRIKISVQRLKGLRLGGCEK 308

Query: 861  MMMFKVKFDVPNIHKFKXXXXXXXXXXXXXXSREWLSEISIWHSCQHLGASWFLKLKRFL 682
            + M ++  D P +  F+                      S+    + + +SWFL L++FL
Sbjct: 309  IEMIEI--DAPILSSFRYKACNMPVLFSKNIPCPMEISYSMHTRGRQVISSWFLDLRKFL 366

Query: 681  TRLSQSKISLSIVFFSEMH--IGDVGDIRGLPRPVVENLMLSIYSSSSD--CSALLDGLF 514
                Q K    +   SE+   + ++ ++   P   V+ L L  YS   D  C +L+DGL 
Sbjct: 367  GASPQRKHFKLMHNESEVSFDLEELEEVEISPVFQVDYLELVSYSLKEDLDCGSLIDGLL 426

Query: 513  WSFRPKVITQYWFPRPRIAEKANNEYLELLSKTLIHQVRQDCGIPDRNLFGLRDLEEVSV 334
            WS  PK I   + P   +        +++L + L+ + + +C    R      +L    +
Sbjct: 427  WSCHPKTI---FVPSDSV---FLINCIKVLCEKLLDKEQPECCTSSRVKCWRHELRGAKI 480

Query: 333  EIFEDSLREWGPLPWKTLLDAPTSLVNRSKIRFQLRW 223
            E+F   +++   L +  LL++ +SL    ++ F+L W
Sbjct: 481  EMFR-GIKDVQVLDFPHLLESLSSLTEDHQVHFKLEW 516


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