BLASTX nr result
ID: Rehmannia25_contig00013212
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00013212
(779 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,... 210 4e-52
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,... 204 3e-50
ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ... 193 5e-47
gb|EOY23460.1| Sigma factor E isoform 1 [Theobroma cacao] gi|508... 186 6e-45
gb|EMJ20209.1| hypothetical protein PRUPE_ppa004259mg [Prunus pe... 186 8e-45
gb|EMJ20208.1| hypothetical protein PRUPE_ppa004259mg [Prunus pe... 186 8e-45
ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,... 185 1e-44
gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis] 183 7e-44
ref|XP_002333134.1| predicted protein [Populus trichocarpa] 182 1e-43
ref|XP_006376620.1| RNA polymerase sigma subunit SigE family pro... 180 6e-43
ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,... 179 7e-43
ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,... 178 2e-42
ref|XP_002331841.1| predicted protein [Populus trichocarpa] 178 2e-42
ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE,... 177 3e-42
ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,... 172 9e-41
ref|XP_003602198.1| RNA polymerase sigma factor rpoD [Medicago t... 169 1e-39
ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citr... 168 2e-39
ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glyci... 166 1e-38
gb|ESW33340.1| hypothetical protein PHAVU_001G061400g [Phaseolus... 164 3e-38
ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [... 159 1e-36
>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Solanum tuberosum]
Length = 516
Score = 210 bits (535), Expect = 4e-52
Identities = 123/222 (55%), Positives = 151/222 (68%), Gaps = 2/222 (0%)
Frame = +1
Query: 118 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 297
MGVVTVSSSA+R+P+GL++R STR+ LKRPVI+SFK DK+KNT LIAP+ES++L +E +
Sbjct: 1 MGVVTVSSSASRSPLGLSSRFSTRLCPLKRPVIVSFKKDKTKNTTLIAPKESISLSIETS 60
Query: 298 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDV-X 474
KEN KR R+V KRSERV+AV+ EA PSTLELDYSEAAAKLE+IYKRS T S+ +V
Sbjct: 61 KENEKRSRRVSKRSERVHAVAI-EASPSTLELDYSEAAAKLESIYKRSLETASSNTEVQD 119
Query: 475 XXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQRK-GKRMGLEKRIALKMKKEGEFVAXXX 651
N V+++RK KR+ L++RIAL KEGE VA
Sbjct: 120 HLVKRRPRTRKRIVEGDEEAKKEVADNVVKNRRKTSKRLNLDQRIALLKNKEGEMVASSE 179
Query: 652 XXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPS 777
ID+LVR+YS +TDL SLDWKKMKIPPVLPS
Sbjct: 180 RRKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPS 221
>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform 1 [Solanum
lycopersicum]
Length = 516
Score = 204 bits (519), Expect = 3e-50
Identities = 120/226 (53%), Positives = 150/226 (66%), Gaps = 6/226 (2%)
Frame = +1
Query: 118 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 297
MGVVTVSSSA+R+P+GL++R S R+ LKRPVI+SFK D +KNT L++P+ES++ P+E +
Sbjct: 1 MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETS 60
Query: 298 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKR-----SPATTVSD 462
KEN KR R+V KR+ERV+AV T EAPPSTLELDYSEAAAKLE+IYKR SP T V D
Sbjct: 61 KENEKRSRRVSKRTERVHAV-TIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKD 119
Query: 463 EDVXXXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQR-KGKRMGLEKRIALKMKKEGEFV 639
V N V+++R K KR+ L++RIAL KEG+ +
Sbjct: 120 HLVKRRPRTRKRIVESDE----EAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKML 175
Query: 640 AXXXXXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPS 777
A ID+LVR+YS +TDL SLDWKKMKIPPVLPS
Sbjct: 176 ASSERRKLNEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPS 221
>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
gi|302143685|emb|CBI22546.3| unnamed protein product
[Vitis vinifera]
Length = 518
Score = 193 bits (491), Expect = 5e-47
Identities = 115/223 (51%), Positives = 143/223 (64%), Gaps = 4/223 (1%)
Frame = +1
Query: 118 MGVVTVSSSAA--RTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVE 291
MGVVTVSSSA+ RTP GLN + S + L+RP++L+FK+DK+KN AL+ P E + LP+E
Sbjct: 1 MGVVTVSSSASASRTPFGLNAKFSNHQTPLRRPLVLAFKADKAKNIALVTPHEPIPLPIE 60
Query: 292 VNKENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-ED 468
+K++ KRLR+ K S+RV AVSTDE P ++ELDY+EAAAKLENIYK SPAT VS+ ED
Sbjct: 61 TSKDHKKRLRRASKPSKRVKAVSTDEVSPCSVELDYNEAAAKLENIYKLSPATDVSEAED 120
Query: 469 VXXXXXXXXXXXXXXNGXXXXXXXXXXXNFVR-SQRKGKRMGLEKRIALKMKKEGEFVAX 645
+ N VR +K KR+ LEKRIAL K+ + VA
Sbjct: 121 LERVVRRGRQRRKRVTLADDKAEKEVSDNVVRIHNKKPKRLSLEKRIALSKMKQEKAVA- 179
Query: 646 XXXXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLP 774
ID LVR+YS+STDLVSLDWKKMKIPPVLP
Sbjct: 180 SIQKKRDSKNEDENIDVLVREYSASTDLVSLDWKKMKIPPVLP 222
>gb|EOY23460.1| Sigma factor E isoform 1 [Theobroma cacao]
gi|508776205|gb|EOY23461.1| Sigma factor E isoform 1
[Theobroma cacao]
Length = 516
Score = 186 bits (473), Expect = 6e-45
Identities = 112/222 (50%), Positives = 139/222 (62%), Gaps = 2/222 (0%)
Frame = +1
Query: 118 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 297
MGVV+VSSSAARTP+GL+T+ ST+ +RP+ ++FK+DKS NTAL+ P+E + LP+E
Sbjct: 1 MGVVSVSSSAARTPLGLSTKFSTQRCTSRRPLTVAFKADKSDNTALVTPQEHILLPIETA 60
Query: 298 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-EDVX 474
KE+ KR K KK + VN V TD+ P TLE+DY+EAAAKLENIYK SPAT SD E+V
Sbjct: 61 KEHPKRRGKAKKDPKIVNHVFTDDGSPCTLEVDYNEAAAKLENIYKLSPATRSSDVEEVE 120
Query: 475 XXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQ-RKGKRMGLEKRIALKMKKEGEFVAXXX 651
VR+Q + KR+ L+ RIALK +E E
Sbjct: 121 GKIKGRRQRRKRSKESDEKGVNSNDQIVVRNQTNRIKRLSLDNRIALKKNRE-EKPVVSV 179
Query: 652 XXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPS 777
IDRLVRDYS+STDLVSLDW+KMKIPPVLPS
Sbjct: 180 RRKKSSENESEKIDRLVRDYSASTDLVSLDWRKMKIPPVLPS 221
>gb|EMJ20209.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
Length = 519
Score = 186 bits (472), Expect = 8e-45
Identities = 103/224 (45%), Positives = 142/224 (63%), Gaps = 4/224 (1%)
Frame = +1
Query: 118 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 297
MGVVTVSSSA+RTP+GL+T+ + + S L++P+I++FK+D++ TAL+AP+E + LP+E
Sbjct: 1 MGVVTVSSSASRTPLGLSTKLTIQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETR 60
Query: 298 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD--EDV 471
K++ KRL K +K ++ V + +TD A P TLE+DY+EAAAKLEN+YKRSP T + EDV
Sbjct: 61 KKHQKRLGKARKLAKSVKSATTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDV 120
Query: 472 XXXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQR--KGKRMGLEKRIALKMKKEGEFVAX 645
+ N V R K KR+ L KR+ALK K+ + ++
Sbjct: 121 DGLMRRGRKRRKKTSESDADKDENRTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVISS 180
Query: 646 XXXXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPS 777
I+ LVR+YS+STDLVSLDWKKMKIPPVL S
Sbjct: 181 IVRKRKSRKNENEKIEELVREYSTSTDLVSLDWKKMKIPPVLTS 224
>gb|EMJ20208.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
Length = 390
Score = 186 bits (472), Expect = 8e-45
Identities = 103/224 (45%), Positives = 142/224 (63%), Gaps = 4/224 (1%)
Frame = +1
Query: 118 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 297
MGVVTVSSSA+RTP+GL+T+ + + S L++P+I++FK+D++ TAL+AP+E + LP+E
Sbjct: 1 MGVVTVSSSASRTPLGLSTKLTIQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETR 60
Query: 298 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD--EDV 471
K++ KRL K +K ++ V + +TD A P TLE+DY+EAAAKLEN+YKRSP T + EDV
Sbjct: 61 KKHQKRLGKARKLAKSVKSATTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDV 120
Query: 472 XXXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQR--KGKRMGLEKRIALKMKKEGEFVAX 645
+ N V R K KR+ L KR+ALK K+ + ++
Sbjct: 121 DGLMRRGRKRRKKTSESDADKDENRTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVISS 180
Query: 646 XXXXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPS 777
I+ LVR+YS+STDLVSLDWKKMKIPPVL S
Sbjct: 181 IVRKRKSRKNENEKIEELVREYSTSTDLVSLDWKKMKIPPVLTS 224
>ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 514
Score = 185 bits (470), Expect = 1e-44
Identities = 114/225 (50%), Positives = 134/225 (59%), Gaps = 5/225 (2%)
Frame = +1
Query: 118 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 297
MGVVTVSS+AARTP L + S S LKRP I++FK+DK NT L++P E V LPVE N
Sbjct: 1 MGVVTVSSAAARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60
Query: 298 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXX 477
KR K +RV AV DEA P +L+LDY+EAAAKLENI+K SP T SD++
Sbjct: 61 NRRKKRSGNTSKPLKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKD 120
Query: 478 XXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQRKG-KRMGLEKRIALKMKKEGEFVA---- 642
+ VR+Q K KR+ L+KRIALK KKEG+ VA
Sbjct: 121 GRSKRGQKRSKKSA------NRPGDGIVRNQTKRIKRLDLDKRIALKNKKEGKAVALLRK 174
Query: 643 XXXXXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPS 777
IDRLVRDYS+STDLVSLDWKKMKIPPVLPS
Sbjct: 175 QKDTKNEADEIDDDEIDRLVRDYSASTDLVSLDWKKMKIPPVLPS 219
>gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]
Length = 517
Score = 183 bits (464), Expect = 7e-44
Identities = 106/222 (47%), Positives = 136/222 (61%), Gaps = 2/222 (0%)
Frame = +1
Query: 118 MGVVTVSSSAARTPVGLNTRCST-RVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEV 294
MGVVTVSSSA+RTP+GL+ + S+ R SVLK+P+I++FK DKS T L+AP++ + LPVE
Sbjct: 1 MGVVTVSSSASRTPLGLSLKFSSNRSSVLKKPLIVAFKGDKSNKTVLVAPQDQIILPVET 60
Query: 295 NKENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVX 474
KE R+ K KK S RV AV+TDEA ST+E+DY+EAAAKLENI+K S A +
Sbjct: 61 RKEVKSRVGKAKKSSNRVKAVATDEASTSTMEVDYNEAAAKLENIFKLSSADVEDAVGLT 120
Query: 475 XXXXXXXXXXXXXNGXXXXXXXXXXXNFVRS-QRKGKRMGLEKRIALKMKKEGEFVAXXX 651
+ VR+ ++K KR+ L KR+ LK KE
Sbjct: 121 SRGRRRRSKVIGESDERAGKKSTTSDTVVRNRKKKAKRLSLHKRVELKRDKEENVAVVLV 180
Query: 652 XXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPS 777
I++LVR+YS+STDLVSLDWKKMKIPPVLPS
Sbjct: 181 RKRRESLNEEEKIEKLVREYSASTDLVSLDWKKMKIPPVLPS 222
>ref|XP_002333134.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 182 bits (461), Expect = 1e-43
Identities = 113/222 (50%), Positives = 140/222 (63%), Gaps = 2/222 (0%)
Frame = +1
Query: 118 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 297
MGVV+VSSSA+RTP+GL+T+ ST S KRP+I++FK+DKS NT+L+AP E + LPVE
Sbjct: 1 MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKADKSNNTSLVAPHEQIPLPVETT 60
Query: 298 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-EDVX 474
K KRL K KK S R+ AV T E P TL +DY+EAAAKLENIYK SP T SD ED
Sbjct: 61 K-GKKRLGKSKKSSNRLKAVRT-EVSPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDAS 118
Query: 475 XXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQ-RKGKRMGLEKRIALKMKKEGEFVAXXX 651
+ VR++ +K KR+ LEKRI+L++K E + V+
Sbjct: 119 GVIRRGRQRKRKISEGGKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVS-SA 177
Query: 652 XXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPS 777
ID LVR+YS+STDLVSLDWKKMKIPPVL S
Sbjct: 178 GKRKDRKNENEKIDDLVREYSASTDLVSLDWKKMKIPPVLTS 219
>ref|XP_006376620.1| RNA polymerase sigma subunit SigE family protein [Populus
trichocarpa] gi|550326141|gb|ERP54417.1| RNA polymerase
sigma subunit SigE family protein [Populus trichocarpa]
Length = 512
Score = 180 bits (456), Expect = 6e-43
Identities = 112/222 (50%), Positives = 140/222 (63%), Gaps = 2/222 (0%)
Frame = +1
Query: 118 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 297
MGVV+VSSSA+RTP+GL+T+ ST S KRP+I++FK++KS NT+L+AP E + LPVE
Sbjct: 1 MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKANKSNNTSLVAPHEQIPLPVETT 60
Query: 298 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-EDVX 474
K KRL K KK S R+ AV T E P TL +DY+EAAAKLENIYK SP T SD ED
Sbjct: 61 K-GKKRLGKSKKSSNRLKAVRT-EVSPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDAS 118
Query: 475 XXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQ-RKGKRMGLEKRIALKMKKEGEFVAXXX 651
+ VR++ +K KR+ LEKRI+L++K E + V+
Sbjct: 119 GVIRRGRQRKRKISEGDKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVS-SA 177
Query: 652 XXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPS 777
ID LVR+YS+STDLVSLDWKKMKIPPVL S
Sbjct: 178 GKRKDRKNENEKIDDLVREYSASTDLVSLDWKKMKIPPVLTS 219
>ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X1 [Glycine
max] gi|571496981|ref|XP_006593757.1| PREDICTED: RNA
polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X2 [Glycine
max]
Length = 512
Score = 179 bits (455), Expect = 7e-43
Identities = 107/222 (48%), Positives = 139/222 (62%), Gaps = 2/222 (0%)
Frame = +1
Query: 118 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 297
MGV+TVS+SAARTP+ LNTR + V KRP+IL+FK +KS T L++P+E + LP+E
Sbjct: 1 MGVITVSTSAARTPLRLNTRLISHQQVHKRPIILAFKGNKSNKTTLVSPQEKIPLPLETA 60
Query: 298 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPAT-TVSDEDVX 474
K++ KR+ K + +RV AVST E P TL++DY+EAAAKLENIYK SP + T + ED+
Sbjct: 61 KKHQKRVGKTSESLKRVRAVSTVETSPCTLDVDYNEAAAKLENIYKLSPVSDTCNVEDID 120
Query: 475 XXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQ-RKGKRMGLEKRIALKMKKEGEFVAXXX 651
+ N VR+Q +K KR+ L+KRIALK + E V
Sbjct: 121 SKIERVLRRRKKVS---EERDDGNCDNVVRNQNKKAKRLSLDKRIALKNNAKEE-VIDQT 176
Query: 652 XXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPS 777
ID L+RDYS+STDLVS+DWKKMKIPPVLPS
Sbjct: 177 QKKRNVKNRVQNIDVLIRDYSASTDLVSMDWKKMKIPPVLPS 218
>ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 515
Score = 178 bits (452), Expect = 2e-42
Identities = 113/227 (49%), Positives = 133/227 (58%), Gaps = 7/227 (3%)
Frame = +1
Query: 118 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 297
MGVVTVSS+AARTP L + S S LKRP I++FK+DK NT L++P E V LPVE N
Sbjct: 1 MGVVTVSSAAARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60
Query: 298 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXX 477
KR K +RV AV DEA P +L+LDY+EAAAKLENI+K SP T SD++
Sbjct: 61 NRRKKRSGNTSKPLKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKD 120
Query: 478 XXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQRKG-KRMGLEKRIALKMK------KEGEF 636
+ VR+Q K KR+ L+KRIALK K KEG+
Sbjct: 121 GRSKRGQKRSKKSA------NRPGDGIVRNQTKRIKRLDLDKRIALKNKRKAKRNKEGKA 174
Query: 637 VAXXXXXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPS 777
V IDRLVRDYS+STDLVSLDWKKMKIPPVLPS
Sbjct: 175 V-PSLRKQKETKNEDDEIDRLVRDYSASTDLVSLDWKKMKIPPVLPS 220
>ref|XP_002331841.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 178 bits (452), Expect = 2e-42
Identities = 110/222 (49%), Positives = 137/222 (61%), Gaps = 2/222 (0%)
Frame = +1
Query: 118 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 297
MG+V+VSSSA+ TP+G +T+ ST S KRP+I++FK+DKS TAL+AP E + LP+E
Sbjct: 1 MGIVSVSSSASWTPLGFSTKFSTCRSTAKRPLIVAFKADKSNETALVAPHEQIPLPIETT 60
Query: 298 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-EDVX 474
KE KR K KK S+R+ AV T E P TL +DY+EAAAKLENIYK SP T SD EDV
Sbjct: 61 KEK-KRRGKSKKSSDRLKAVRT-EVSPCTLGVDYNEAAAKLENIYKLSPGTDTSDVEDVN 118
Query: 475 XXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQ-RKGKRMGLEKRIALKMKKEGEFVAXXX 651
+ VR+Q +K KR+ L+KRIAL++K + + V
Sbjct: 119 GVIRRCRQRKRKTSECEKEDDGRTSKIIVRNQAKKAKRLSLQKRIALRIKSDEKLVT-SV 177
Query: 652 XXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPS 777
ID LVR+YSSSTDL SLDWKKMKIPPVL S
Sbjct: 178 GKRKGRKNENEKIDELVREYSSSTDLASLDWKKMKIPPVLTS 219
>ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform 2 [Solanum
lycopersicum]
Length = 487
Score = 177 bits (450), Expect = 3e-42
Identities = 112/226 (49%), Positives = 138/226 (61%), Gaps = 6/226 (2%)
Frame = +1
Query: 118 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 297
MGVVTVSSSA+R+P+GL++R S R+ LKRPVI+SFK D +KNT L++P+ES++ P+E +
Sbjct: 1 MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETS 60
Query: 298 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKR-----SPATTVSD 462
KEN KR R+V KR+ERV+AV T EAPPSTLELDYSEAAAKLE+IYKR SP T V D
Sbjct: 61 KENEKRSRRVSKRTERVHAV-TIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKD 119
Query: 463 EDVXXXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQR-KGKRMGLEKRIALKMKKEGEFV 639
V N V+++R K KR+ L++RIAL KEG
Sbjct: 120 HLVKRRPRTRKRIVESDE----EAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEG--- 172
Query: 640 AXXXXXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPS 777
+TDL SLDWKKMKIPPVLPS
Sbjct: 173 --------------------------ATDLASLDWKKMKIPPVLPS 192
>ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 520
Score = 172 bits (437), Expect = 9e-41
Identities = 104/225 (46%), Positives = 138/225 (61%), Gaps = 5/225 (2%)
Frame = +1
Query: 118 MGVVTVSSSAARTPVGLNTRC-STRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEV 294
MGVVTVSSS +RTP+GL+T S++ S L++P+I++F++DKS AL+AP+E V LP+E
Sbjct: 1 MGVVTVSSSVSRTPLGLSTNLVSSQRSTLRKPLIVAFRTDKSDKKALVAPQEKVPLPIET 60
Query: 295 NKENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-EDV 471
K+ KRL K +K + V A +EAP LELDY+EAAAKLEN+YKRSP T SD E+V
Sbjct: 61 GKKVQKRLGKARKLPKSVKAALIEEAPTCDLELDYNEAAAKLENLYKRSPETEASDVENV 120
Query: 472 XXXXXXXXXXXXXXNGXXXXXXXXXXXN--FVRS-QRKGKRMGLEKRIALKMKKEGEFVA 642
+ VRS +K KR+ L+KR+ALK K+ + A
Sbjct: 121 DGLMIKRGRKRRKKISEVDDKVEKRTSDDIVVRSVTKKAKRLSLDKRVALKWNKDEKVAA 180
Query: 643 XXXXXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPS 777
++ LVR+YS+STDLVSLDWKKM+IPPVL S
Sbjct: 181 SVVRKRKDKRSENEMMEELVREYSASTDLVSLDWKKMRIPPVLSS 225
>ref|XP_003602198.1| RNA polymerase sigma factor rpoD [Medicago truncatula]
gi|355491246|gb|AES72449.1| RNA polymerase sigma factor
rpoD [Medicago truncatula]
Length = 514
Score = 169 bits (428), Expect = 1e-39
Identities = 100/220 (45%), Positives = 126/220 (57%)
Frame = +1
Query: 118 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 297
MGVVTVSSSAARTP+GLN + ST VLKRP+ ++FK DK +TAL+A +E + V+
Sbjct: 1 MGVVTVSSSAARTPLGLNAKFSTHHPVLKRPLTVAFKGDKQNDTALVATQEKIPTQVKPA 60
Query: 298 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXX 477
K + KR+ K K ++ AV T+E PS+L++DY+EAAA LENIYK SP T + D D
Sbjct: 61 KTHKKRIAKTNKLPKKPRAVCTEETFPSSLDVDYNEAAAILENIYKLSPTTDICDADYIE 120
Query: 478 XXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQRKGKRMGLEKRIALKMKKEGEFVAXXXXX 657
G + K KRM L++RIALK + E V
Sbjct: 121 RKIKRVSRRGKKIGDVSKEDSNSDRVVRNQKTKAKRMNLDERIALKTSENSEDV-IPTRK 179
Query: 658 XXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPS 777
ID L+R+YS DLVSLDWKKMKIPPVLPS
Sbjct: 180 KRNPRSRVEKIDELLREYSVPADLVSLDWKKMKIPPVLPS 219
>ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citrus clementina]
gi|567858878|ref|XP_006422122.1| hypothetical protein
CICLE_v10004760mg [Citrus clementina]
gi|568874930|ref|XP_006490565.1| PREDICTED: RNA
polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X1 [Citrus
sinensis] gi|568874932|ref|XP_006490566.1| PREDICTED:
RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X2 [Citrus
sinensis] gi|568874934|ref|XP_006490567.1| PREDICTED:
RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X3 [Citrus
sinensis] gi|557523994|gb|ESR35361.1| hypothetical
protein CICLE_v10004760mg [Citrus clementina]
gi|557523995|gb|ESR35362.1| hypothetical protein
CICLE_v10004760mg [Citrus clementina]
Length = 513
Score = 168 bits (426), Expect = 2e-39
Identities = 102/222 (45%), Positives = 134/222 (60%), Gaps = 2/222 (0%)
Frame = +1
Query: 118 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 297
MGVVT+SSS AR+P+GL+T + S KRP+I++FK+DKS N AL +P+E + LP+E
Sbjct: 1 MGVVTISSSPARSPIGLST--ISHRSTSKRPLIVAFKADKSNNQALFSPQEQIPLPIETP 58
Query: 298 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXX 477
K + KR +KR ERV V +DEA P TL++DY+EAAAKLENIYK SPA T S+
Sbjct: 59 KRHQKRRENSRKRLERVKGVFSDEASPCTLDVDYNEAAAKLENIYKLSPAVTTSEVKYAD 118
Query: 478 XXXXXXXXXXXXNGXXXXXXXXXXXN-FVRSQ-RKGKRMGLEKRIALKMKKEGEFVAXXX 651
G VR+Q ++ KR+ L+KRI L+ ++ + V
Sbjct: 119 GVVKRGRQRRKRIGEVEKKSDDVSGKPVVRNQVKRPKRLSLDKRIELRKNEDEKVVT--K 176
Query: 652 XXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPS 777
I++LVR+YS STDLVSLDWKKMKIPPVL S
Sbjct: 177 TRKTDSKDEHEKIEKLVREYSYSTDLVSLDWKKMKIPPVLSS 218
>ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glycine max]
gi|382365028|dbj|BAM05477.1| sigma-like factor 5A
[Glycine max]
Length = 512
Score = 166 bits (419), Expect = 1e-38
Identities = 101/222 (45%), Positives = 133/222 (59%), Gaps = 2/222 (0%)
Frame = +1
Query: 118 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 297
MGVVTVS+ AARTP+ LNTR ++ V KRP+I++FK +K AL++P+E + LP+E
Sbjct: 1 MGVVTVSTLAARTPLRLNTRLTSHQQVHKRPLIVAFKGNKLNKAALVSPQEQIPLPIETA 60
Query: 298 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPAT-TVSDEDVX 474
K++ KR+ K + +RV AVS E P TL++DY+EAAAKLENIYK SP + T + ED+
Sbjct: 61 KKDQKRVGKTSESLKRVRAVSIVETSPCTLDMDYNEAAAKLENIYKLSPVSDTCNMEDID 120
Query: 475 XXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQ-RKGKRMGLEKRIALKMKKEGEFVAXXX 651
VR+Q +K KR+ L+KRI LK + E V
Sbjct: 121 SKVERVLWRRRKVGNEHDDENCDI---VVRNQNKKAKRLSLDKRITLKNNAKEE-VIDQT 176
Query: 652 XXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPS 777
ID L+RDYS+STDLVS+DWKKMKIP VLPS
Sbjct: 177 QKIRNVKNRVQNIDVLIRDYSASTDLVSMDWKKMKIPAVLPS 218
>gb|ESW33340.1| hypothetical protein PHAVU_001G061400g [Phaseolus vulgaris]
Length = 511
Score = 164 bits (415), Expect = 3e-38
Identities = 98/222 (44%), Positives = 134/222 (60%), Gaps = 2/222 (0%)
Frame = +1
Query: 118 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 297
MGVVTVS+SAARTP+ L+T+ + KR +I++FK +K T L++P+E + LP+E
Sbjct: 1 MGVVTVSTSAARTPLRLSTKLISLQQAHKRLLIVAFKGNKLNKTTLVSPKEQIPLPLETA 60
Query: 298 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-EDVX 474
K++ KR+ K +RV AVSTDE P TL++DY+EAAAKLENIYK S ++ D ED+
Sbjct: 61 KKHRKRIGKTNDSVKRVRAVSTDETTPFTLDVDYNEAAAKLENIYKLSSVSSTCDTEDI- 119
Query: 475 XXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQ-RKGKRMGLEKRIALKMKKEGEFVAXXX 651
+ VR+Q +K KR+ L+KRIALK + E +
Sbjct: 120 --DSKTKRVLRRRKNVGDEHDDRNDGSVVRNQNKKAKRLSLDKRIALKRNPKQEVIV--Q 175
Query: 652 XXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPS 777
ID L+R+YS+STDLVS+DWKK+KIPPVLPS
Sbjct: 176 AQKKRDVNRIENIDALIREYSASTDLVSMDWKKIKIPPVLPS 217
>ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223547495|gb|EEF48990.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 501
Score = 159 bits (402), Expect = 1e-36
Identities = 100/221 (45%), Positives = 126/221 (57%), Gaps = 1/221 (0%)
Frame = +1
Query: 118 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 297
MGVVT SSSAARTP+GL+ + ST S +KR ++++FK DK+ + L+ PRE LP+E +
Sbjct: 1 MGVVTASSSAARTPLGLSLKFSTYRSTVKRSLVVAFKEDKANDIILVPPRERTPLPIETS 60
Query: 298 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXX 477
K KKR + N E TLE+DY+EAAAKLENIYK SPAT SD D+
Sbjct: 61 KG--------KKRRGKTNR----EVSSGTLEVDYNEAAAKLENIYKLSPATDTSDVDING 108
Query: 478 XXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQ-RKGKRMGLEKRIALKMKKEGEFVAXXXX 654
VR++ +K KR+ L+KRIALK K E E V
Sbjct: 109 LIRKGRQRKRKTGEGDEKAENRTSRTIVRNRAKKTKRLSLDKRIALK-KNEEEEVVGPIR 167
Query: 655 XXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPS 777
I+ LVR YS+ST+LVSLDW+KMKIPPVLPS
Sbjct: 168 KKKDSKDDNEKIEELVRTYSASTNLVSLDWRKMKIPPVLPS 208