BLASTX nr result
ID: Rehmannia25_contig00013157
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00013157
(1678 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006364201.1| PREDICTED: pentatricopeptide repeat-containi... 469 e-129
ref|XP_004235996.1| PREDICTED: pentatricopeptide repeat-containi... 465 e-128
ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containi... 448 e-123
emb|CBI36294.3| unnamed protein product [Vitis vinifera] 448 e-123
gb|EMJ17106.1| hypothetical protein PRUPE_ppa004160mg [Prunus pe... 442 e-121
ref|XP_006465352.1| PREDICTED: pentatricopeptide repeat-containi... 440 e-121
ref|XP_006427239.1| hypothetical protein CICLE_v100269871mg, par... 436 e-119
gb|EXB67320.1| hypothetical protein L484_025802 [Morus notabilis] 429 e-117
gb|EOY26490.1| Pentatricopeptide repeat (PPR) superfamily protei... 427 e-117
ref|XP_002305285.2| pentatricopeptide repeat-containing family p... 426 e-116
ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containi... 419 e-114
ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containi... 419 e-114
ref|XP_002894392.1| pentatricopeptide repeat-containing protein ... 414 e-113
ref|XP_002530894.1| pentatricopeptide repeat-containing protein,... 413 e-112
ref|NP_175673.1| pentatricopeptide repeat-containing protein [Ar... 412 e-112
ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containi... 411 e-112
ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containi... 408 e-111
ref|XP_006392896.1| hypothetical protein EUTSA_v10011389mg [Eutr... 405 e-110
ref|XP_004305328.1| PREDICTED: pentatricopeptide repeat-containi... 405 e-110
ref|XP_003630734.1| Pentatricopeptide repeat-containing protein ... 405 e-110
>ref|XP_006364201.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Solanum tuberosum]
Length = 550
Score = 469 bits (1207), Expect = e-129
Identities = 220/307 (71%), Positives = 262/307 (85%)
Frame = +1
Query: 1 VKTYSIMIRGWGDIGDSGEAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFK 180
VKTYSI+IRGWGD+G+ EAQKLFDEMLERG +VDLLA+NS+L +LCK GK+DEA+ F
Sbjct: 242 VKTYSILIRGWGDLGEVAEAQKLFDEMLERGCSVDLLAYNSILDSLCKAGKMDEAFNFFM 301
Query: 181 GMRAKGLEPDAYSYSIFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKND 360
MR+ GL PDA+SYSIFIH C AND+HS FRVLD M+RY LVPNVFTYNCIIKKLCK
Sbjct: 302 KMRSIGLIPDAFSYSIFIHGYCTANDIHSVFRVLDQMRRYKLVPNVFTYNCIIKKLCKTK 361
Query: 361 KIDEAYELLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYN 540
K+DEAY+L+DEMI +G PD WSYNTILA HCDHNEVN A +L+SRM Q+ C D HTYN
Sbjct: 362 KVDEAYQLIDEMISEGVRPDCWSYNTILASHCDHNEVNLAHRLVSRMEQNNCLPDKHTYN 421
Query: 541 MVLKMLIRIGRFDRVEKVWYSMEERGFHPTVSTYAVMIHGLCKKRGKLEEAYKYFEMMID 720
M+LKMLIR+GRFDRVEKVW SME+R F+P+VSTY+VM+HG C+K+GKLEEA KYFEMMID
Sbjct: 422 MLLKMLIRVGRFDRVEKVWESMEDRNFYPSVSTYSVMVHGFCQKKGKLEEACKYFEMMID 481
Query: 721 EGIPPYSSTCELLRNKLIGWGFAEKTDILADKMDRSTSKSIQEAANLMRGNREALRLRSD 900
EGIPPY+ TCE LRN+LIG GFAE+T+ILADKM+RSTS IQE A++MRGN+ ++L+ D
Sbjct: 482 EGIPPYTETCEKLRNRLIGHGFAEQTEILADKMERSTSSLIQELASVMRGNKARVKLKHD 541
Query: 901 GEFSDES 921
E+SDE+
Sbjct: 542 EEYSDEN 548
>ref|XP_004235996.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Solanum lycopersicum]
Length = 550
Score = 465 bits (1196), Expect = e-128
Identities = 220/307 (71%), Positives = 258/307 (84%)
Frame = +1
Query: 1 VKTYSIMIRGWGDIGDSGEAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFK 180
VKTYSI+IRGWGD+G+ EAQKLFDEMLERG +VDLLA+NS+L +LCK GK+DEA+ F
Sbjct: 242 VKTYSILIRGWGDLGEVAEAQKLFDEMLERGCSVDLLAYNSILDSLCKAGKMDEAFNFFM 301
Query: 181 GMRAKGLEPDAYSYSIFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKND 360
MR+ GL PDA+SYSIFIH C ND+HS FRVLD M+RY LVPNVFTYNCIIKKLCK
Sbjct: 302 KMRSIGLIPDAFSYSIFIHGYCAGNDIHSVFRVLDQMRRYKLVPNVFTYNCIIKKLCKTK 361
Query: 361 KIDEAYELLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYN 540
K+DEAY+L+DEMI +G PD WSYNTILA HCD NEVN A +L+SRM Q+ C D HTYN
Sbjct: 362 KVDEAYQLIDEMINEGVRPDCWSYNTILASHCDQNEVNLAHRLVSRMEQNNCLPDKHTYN 421
Query: 541 MVLKMLIRIGRFDRVEKVWYSMEERGFHPTVSTYAVMIHGLCKKRGKLEEAYKYFEMMID 720
M+LKMLIR+GRFDRVEKVW SME R F+P+VSTYAVM+HG C+K+GKLEEA KYFEMMID
Sbjct: 422 MLLKMLIRVGRFDRVEKVWKSMEGRNFYPSVSTYAVMVHGFCQKKGKLEEACKYFEMMID 481
Query: 721 EGIPPYSSTCELLRNKLIGWGFAEKTDILADKMDRSTSKSIQEAANLMRGNREALRLRSD 900
EGIPPY+ TCE LRN+LIG GFAE+T+ILADKM+RSTS IQE A +MRGN+ L+L+ D
Sbjct: 482 EGIPPYTETCEKLRNRLIGHGFAEQTEILADKMERSTSSLIQELAGVMRGNKARLKLKHD 541
Query: 901 GEFSDES 921
E+SDE+
Sbjct: 542 EEYSDEN 548
Score = 101 bits (251), Expect = 1e-18
Identities = 69/286 (24%), Positives = 133/286 (46%), Gaps = 1/286 (0%)
Frame = +1
Query: 16 IMIRGWGDIGDSGEAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFKGMRAK 195
++ R + G +A + F++M++ G L + +L ALCK +A E F ++
Sbjct: 178 LVFRAYSRAGLPADAIRAFNKMVDFGIKPCLADLDKLLLALCKRKHAKQAQEFFDKVKDD 237
Query: 196 GLEPDAYSYSIFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKNDKIDEA 375
+ P +YSI I + ++ A ++ D M ++ YN I+ LCK K+DEA
Sbjct: 238 FM-PSVKTYSILIRGWGDLGEVAEAQKLFDEMLERGCSVDLLAYNSILDSLCKAGKMDEA 296
Query: 376 YELLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYNMVLKM 555
+ +M G IPD +SY+ + +C N+++ F+++ +M + K + TYN ++K
Sbjct: 297 FNFFMKMRSIGLIPDAFSYSIFIHGYCAGNDIHSVFRVLDQMRRYKLVPNVFTYNCIIKK 356
Query: 556 LIRIGRFDRVEKVWYSMEERGFHPTVSTYAVMIHGLCKKRGKLEEAYKYFEMMIDEGIPP 735
L + + D ++ M G P +Y ++ C + ++ A++ M P
Sbjct: 357 LCKTKKVDEAYQLIDEMINEGVRPDCWSYNTILASHC-DQNEVNLAHRLVSRMEQNNCLP 415
Query: 736 YSSTCELLRNKLIGWGFAEKTDILADKMD-RSTSKSIQEAANLMRG 870
T +L LI G ++ + + M+ R+ S+ A ++ G
Sbjct: 416 DKHTYNMLLKMLIRVGRFDRVEKVWKSMEGRNFYPSVSTYAVMVHG 461
>ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 448 bits (1152), Expect = e-123
Identities = 214/316 (67%), Positives = 260/316 (82%)
Frame = +1
Query: 4 KTYSIMIRGWGDIGDSGEAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFKG 183
KTYSI++RGWGD+GDS EA+KLF+EM ERG VD++A+NS+L ALCKGG VDEAY+LF+
Sbjct: 220 KTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFRE 279
Query: 184 MRAKGLEPDAYSYSIFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKNDK 363
M + GL PDA SYSIFI A CE ND+HSAF+VLD M+RYNLVPNVFTYNCI+KKLCK++K
Sbjct: 280 MGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEK 339
Query: 364 IDEAYELLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYNM 543
+DEAY+LLDEMIE+G PD WSYN I AFHCDH EVN+A +LISRM ++ C D HTYNM
Sbjct: 340 VDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNM 399
Query: 544 VLKMLIRIGRFDRVEKVWYSMEERGFHPTVSTYAVMIHGLCKKRGKLEEAYKYFEMMIDE 723
VLKML+R+GRFDRV VW MEERGF+P STYAVM+HG CKK+GKLEEA KYFEMMID+
Sbjct: 400 VLKMLLRVGRFDRVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDD 459
Query: 724 GIPPYSSTCELLRNKLIGWGFAEKTDILADKMDRSTSKSIQEAANLMRGNREALRLRSDG 903
GIPPYS T ELLRN++IG GF+E+ D+LA KM+RSTS IQE +++MRG + + RLRS
Sbjct: 460 GIPPYSCTVELLRNRVIGLGFSEQIDVLAGKMERSTSCVIQELSSVMRGEKASGRLRS-- 517
Query: 904 EFSDESCDEMRESFEH 951
E + +E E +E+
Sbjct: 518 EEQNLPSEERGEGYEY 533
Score = 108 bits (270), Expect = 7e-21
Identities = 71/274 (25%), Positives = 130/274 (47%), Gaps = 1/274 (0%)
Frame = +1
Query: 52 GEAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFKGMRAKGLEPDAYSYSIF 231
G+A + F +M + G + + +L+ LCK V +A E F + + + P+A +YSI
Sbjct: 167 GDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVNVEVM-PNAKTYSIL 225
Query: 232 IHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKNDKIDEAYELLDEMIEKGA 411
+ + D A ++ + M+ +V YN +++ LCK +DEAY+L EM G
Sbjct: 226 MRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGL 285
Query: 412 IPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYNMVLKMLIRIGRFDRVEK 591
PD SY+ + +C+ N+++ AF+++ RM + + TYN ++K L + + D +
Sbjct: 286 APDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQ 345
Query: 592 VWYSMEERGFHPTVSTYAVMIHGLCKKRGKLEEAYKYFEMMIDEGIPPYSSTCELLRNKL 771
+ M ERG P + +Y + C ++ +A + M E P T ++ L
Sbjct: 346 LLDEMIERGVSPDLWSYNAIQAFHC-DHCEVNKALRLISRMEKENCMPDRHTYNMVLKML 404
Query: 772 IGWG-FAEKTDILADKMDRSTSKSIQEAANLMRG 870
+ G F TD+ +R + A ++ G
Sbjct: 405 LRVGRFDRVTDVWGGMEERGFYPAASTYAVMVHG 438
Score = 66.2 bits (160), Expect = 4e-08
Identities = 48/204 (23%), Positives = 79/204 (38%), Gaps = 34/204 (16%)
Frame = +1
Query: 226 IFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKNDKIDEAYE-------- 381
+ A C AN A R M + + V + ++ LCK + +A E
Sbjct: 155 LIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVNVE 214
Query: 382 --------------------------LLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAF 483
L +EM E+G D +YN++L C V+ A+
Sbjct: 215 VMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAY 274
Query: 484 KLISRMGQDKCERDTHTYNMVLKMLIRIGRFDRVEKVWYSMEERGFHPTVSTYAVMIHGL 663
KL MG + D +Y++ ++ + +V M P V TY ++ L
Sbjct: 275 KLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKL 334
Query: 664 CKKRGKLEEAYKYFEMMIDEGIPP 735
CK K++EAY+ + MI+ G+ P
Sbjct: 335 CKSE-KVDEAYQLLDEMIERGVSP 357
>emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 448 bits (1152), Expect = e-123
Identities = 214/316 (67%), Positives = 260/316 (82%)
Frame = +1
Query: 4 KTYSIMIRGWGDIGDSGEAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFKG 183
KTYSI++RGWGD+GDS EA+KLF+EM ERG VD++A+NS+L ALCKGG VDEAY+LF+
Sbjct: 193 KTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFRE 252
Query: 184 MRAKGLEPDAYSYSIFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKNDK 363
M + GL PDA SYSIFI A CE ND+HSAF+VLD M+RYNLVPNVFTYNCI+KKLCK++K
Sbjct: 253 MGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEK 312
Query: 364 IDEAYELLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYNM 543
+DEAY+LLDEMIE+G PD WSYN I AFHCDH EVN+A +LISRM ++ C D HTYNM
Sbjct: 313 VDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNM 372
Query: 544 VLKMLIRIGRFDRVEKVWYSMEERGFHPTVSTYAVMIHGLCKKRGKLEEAYKYFEMMIDE 723
VLKML+R+GRFDRV VW MEERGF+P STYAVM+HG CKK+GKLEEA KYFEMMID+
Sbjct: 373 VLKMLLRVGRFDRVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDD 432
Query: 724 GIPPYSSTCELLRNKLIGWGFAEKTDILADKMDRSTSKSIQEAANLMRGNREALRLRSDG 903
GIPPYS T ELLRN++IG GF+E+ D+LA KM+RSTS IQE +++MRG + + RLRS
Sbjct: 433 GIPPYSCTVELLRNRVIGLGFSEQIDVLAGKMERSTSCVIQELSSVMRGEKASGRLRS-- 490
Query: 904 EFSDESCDEMRESFEH 951
E + +E E +E+
Sbjct: 491 EEQNLPSEERGEGYEY 506
Score = 108 bits (270), Expect = 7e-21
Identities = 71/274 (25%), Positives = 130/274 (47%), Gaps = 1/274 (0%)
Frame = +1
Query: 52 GEAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFKGMRAKGLEPDAYSYSIF 231
G+A + F +M + G + + +L+ LCK V +A E F + + + P+A +YSI
Sbjct: 140 GDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVNVEVM-PNAKTYSIL 198
Query: 232 IHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKNDKIDEAYELLDEMIEKGA 411
+ + D A ++ + M+ +V YN +++ LCK +DEAY+L EM G
Sbjct: 199 MRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGL 258
Query: 412 IPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYNMVLKMLIRIGRFDRVEK 591
PD SY+ + +C+ N+++ AF+++ RM + + TYN ++K L + + D +
Sbjct: 259 APDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQ 318
Query: 592 VWYSMEERGFHPTVSTYAVMIHGLCKKRGKLEEAYKYFEMMIDEGIPPYSSTCELLRNKL 771
+ M ERG P + +Y + C ++ +A + M E P T ++ L
Sbjct: 319 LLDEMIERGVSPDLWSYNAIQAFHC-DHCEVNKALRLISRMEKENCMPDRHTYNMVLKML 377
Query: 772 IGWG-FAEKTDILADKMDRSTSKSIQEAANLMRG 870
+ G F TD+ +R + A ++ G
Sbjct: 378 LRVGRFDRVTDVWGGMEERGFYPAASTYAVMVHG 411
Score = 66.2 bits (160), Expect = 4e-08
Identities = 48/204 (23%), Positives = 79/204 (38%), Gaps = 34/204 (16%)
Frame = +1
Query: 226 IFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKNDKIDEAYE-------- 381
+ A C AN A R M + + V + ++ LCK + +A E
Sbjct: 128 LIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVNVE 187
Query: 382 --------------------------LLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAF 483
L +EM E+G D +YN++L C V+ A+
Sbjct: 188 VMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAY 247
Query: 484 KLISRMGQDKCERDTHTYNMVLKMLIRIGRFDRVEKVWYSMEERGFHPTVSTYAVMIHGL 663
KL MG + D +Y++ ++ + +V M P V TY ++ L
Sbjct: 248 KLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKL 307
Query: 664 CKKRGKLEEAYKYFEMMIDEGIPP 735
CK K++EAY+ + MI+ G+ P
Sbjct: 308 CKSE-KVDEAYQLLDEMIERGVSP 330
>gb|EMJ17106.1| hypothetical protein PRUPE_ppa004160mg [Prunus persica]
Length = 526
Score = 442 bits (1137), Expect = e-121
Identities = 214/308 (69%), Positives = 253/308 (82%)
Frame = +1
Query: 4 KTYSIMIRGWGDIGDSGEAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFKG 183
K YSI++RGWGDIGDS EA+KLFDEM ERG VD+ A+NS L ALCKGGKVDEAY++F+G
Sbjct: 220 KIYSILMRGWGDIGDSDEARKLFDEMTERGCLVDVPAYNSYLEALCKGGKVDEAYKIFRG 279
Query: 184 MRAKGLEPDAYSYSIFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKNDK 363
M + G +PDA +YSIFI A CEAND+HS FRVLD MKRYNL+PNV++YNCIIKKLCKNDK
Sbjct: 280 MGSNGTDPDACTYSIFIRAYCEANDIHSVFRVLDRMKRYNLLPNVYSYNCIIKKLCKNDK 339
Query: 364 IDEAYELLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYNM 543
++EAYELLDEMIE+G +PD WSYN I A HCDH EVNRA +L+SRM +D C+ D HTYNM
Sbjct: 340 VEEAYELLDEMIERGVMPDAWSYNAIQAHHCDHCEVNRALRLLSRMKKDNCKPDRHTYNM 399
Query: 544 VLKMLIRIGRFDRVEKVWYSMEERGFHPTVSTYAVMIHGLCKKRGKLEEAYKYFEMMIDE 723
VLK+LIRIGRFDR +VW SM ERGF+P+VSTY+VMIHGLCKK+ KLEEA KYFE+MIDE
Sbjct: 400 VLKLLIRIGRFDRATEVWESMGERGFYPSVSTYSVMIHGLCKKKHKLEEACKYFEIMIDE 459
Query: 724 GIPPYSSTCELLRNKLIGWGFAEKTDILADKMDRSTSKSIQEAANLMRGNREALRLRSDG 903
GIPPY ST E+L+N+L G G E T+ILA KM++ST SIQE ANLMRGN+ + R
Sbjct: 460 GIPPYFSTVEMLKNRLRGLGLLEHTEILASKMEQSTCCSIQEMANLMRGNKTYVTYRI-- 517
Query: 904 EFSDESCD 927
E +D D
Sbjct: 518 EHTDNESD 525
Score = 73.6 bits (179), Expect = 2e-10
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 34/196 (17%)
Frame = +1
Query: 250 ANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKNDKI--------------------- 366
AN A R + M + + P+V + ++ LCK +
Sbjct: 163 ANLPRDAIRAFNRMVEFGIKPSVLDLDQLMYTLCKRKHVKYAHEFFDKVKSGFELNAKIY 222
Query: 367 -------------DEAYELLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQ 507
DEA +L DEM E+G + D +YN+ L C +V+ A+K+ MG
Sbjct: 223 SILMRGWGDIGDSDEARKLFDEMTERGCLVDVPAYNSYLEALCKGGKVDEAYKIFRGMGS 282
Query: 508 DKCERDTHTYNMVLKMLIRIGRFDRVEKVWYSMEERGFHPTVSTYAVMIHGLCKKRGKLE 687
+ + D TY++ ++ V +V M+ P V +Y +I LC K K+E
Sbjct: 283 NGTDPDACTYSIFIRAYCEANDIHSVFRVLDRMKRYNLLPNVYSYNCIIKKLC-KNDKVE 341
Query: 688 EAYKYFEMMIDEGIPP 735
EAY+ + MI+ G+ P
Sbjct: 342 EAYELLDEMIERGVMP 357
>ref|XP_006465352.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Citrus sinensis]
Length = 531
Score = 440 bits (1132), Expect = e-121
Identities = 208/300 (69%), Positives = 253/300 (84%)
Frame = +1
Query: 1 VKTYSIMIRGWGDIGDSGEAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFK 180
VKTYSI++RG GD+G+ EA+KLFDEMLER VD+LA NS+L A+CK G +DEA+ + +
Sbjct: 225 VKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR 284
Query: 181 GMRAKGLEPDAYSYSIFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKND 360
MR+ G EPDA+SYSIFIHA CEAND+HS FRVLDSMKRYNLVPNVFTYNCIIKKLCKN+
Sbjct: 285 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIKKLCKNE 344
Query: 361 KIDEAYELLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYN 540
K++EAY+LLDEMIE+GA PD WSYN ILA+HCDH EVN A +LI+RM ++ D HTYN
Sbjct: 345 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDHAEVNMALRLITRMTKENVMPDRHTYN 404
Query: 541 MVLKMLIRIGRFDRVEKVWYSMEERGFHPTVSTYAVMIHGLCKKRGKLEEAYKYFEMMID 720
MVLK+L+R+GRFDR +VW SME+RGF+P+VSTY+VM+HGLCKK+GKLEEA KYFEMM+D
Sbjct: 405 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 464
Query: 721 EGIPPYSSTCELLRNKLIGWGFAEKTDILADKMDRSTSKSIQEAANLMRGNREALRLRSD 900
EGIPPYSST E+LRN+L+G GF + +ILADKM+RSTS +IQE AN MRG + RS+
Sbjct: 465 EGIPPYSSTVEMLRNRLVGLGFLDVIEILADKMERSTSCTIQELANAMRGKIGFRKSRSE 524
Score = 107 bits (267), Expect = 2e-20
Identities = 68/286 (23%), Positives = 134/286 (46%), Gaps = 1/286 (0%)
Frame = +1
Query: 16 IMIRGWGDIGDSGEAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFKGMRAK 195
I+ R + +A + F+ M+E G + + +LHALCK V A++ F ++ +
Sbjct: 161 IVFRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNVKHE 220
Query: 196 GLEPDAYSYSIFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKNDKIDEA 375
+ P +YSI + + +L A ++ D M ++ +N +++ +CK IDEA
Sbjct: 221 -ITPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA 279
Query: 376 YELLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYNMVLKM 555
+ +L EM GA PD +SY+ + C+ N+++ F+++ M + + TYN ++K
Sbjct: 280 HGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIKK 339
Query: 556 LIRIGRFDRVEKVWYSMEERGFHPTVSTYAVMIHGLCKKRGKLEEAYKYFEMMIDEGIPP 735
L + + + ++ M ERG +P +Y ++ C ++ A + M E + P
Sbjct: 340 LCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC-DHAEVNMALRLITRMTKENVMP 398
Query: 736 YSSTCELLRNKLIGWG-FAEKTDILADKMDRSTSKSIQEAANLMRG 870
T ++ L+ G F T++ R S+ + ++ G
Sbjct: 399 DRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 444
>ref|XP_006427239.1| hypothetical protein CICLE_v100269871mg, partial [Citrus clementina]
gi|557529229|gb|ESR40479.1| hypothetical protein
CICLE_v100269871mg, partial [Citrus clementina]
Length = 436
Score = 436 bits (1122), Expect = e-119
Identities = 206/300 (68%), Positives = 252/300 (84%)
Frame = +1
Query: 1 VKTYSIMIRGWGDIGDSGEAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFK 180
VKTYSI++RG GD+G+ EA+KLFDEMLER VD+LA NS+L A+CK G +DEA+ + +
Sbjct: 130 VKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR 189
Query: 181 GMRAKGLEPDAYSYSIFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKND 360
MR+ G EPDA+SYSIFIHA CEAND+HS FRVLDSMKRYNLVPNVFTYNCII+KLCKN+
Sbjct: 190 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 249
Query: 361 KIDEAYELLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYN 540
K++EAY+LLDEMIE+GA PD WSYN ILA+HCD EVN A +LI+RM ++ D HTYN
Sbjct: 250 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 309
Query: 541 MVLKMLIRIGRFDRVEKVWYSMEERGFHPTVSTYAVMIHGLCKKRGKLEEAYKYFEMMID 720
MVLK+L+R+GRFDR +VW SME+RGF+P+VSTY+VM+HGLCKK+GKLEEA KYFEMM+D
Sbjct: 310 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 369
Query: 721 EGIPPYSSTCELLRNKLIGWGFAEKTDILADKMDRSTSKSIQEAANLMRGNREALRLRSD 900
EGIPPYSST E+LRN+L+G GF + +ILADKM+RSTS +IQE AN MRG + RS+
Sbjct: 370 EGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSE 429
Score = 107 bits (267), Expect = 2e-20
Identities = 68/286 (23%), Positives = 134/286 (46%), Gaps = 1/286 (0%)
Frame = +1
Query: 16 IMIRGWGDIGDSGEAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFKGMRAK 195
I++R + +A + F+ M+E G + + +LHALCK V A++ F + +
Sbjct: 66 IVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE 125
Query: 196 GLEPDAYSYSIFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKNDKIDEA 375
P +YSI + + +L A ++ D M ++ +N +++ +CK IDEA
Sbjct: 126 -FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA 184
Query: 376 YELLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYNMVLKM 555
+ +L EM GA PD +SY+ + C+ N+++ F+++ M + + TYN +++
Sbjct: 185 HGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRK 244
Query: 556 LIRIGRFDRVEKVWYSMEERGFHPTVSTYAVMIHGLCKKRGKLEEAYKYFEMMIDEGIPP 735
L + + + ++ M ERG +P +Y ++ C R ++ A + M E + P
Sbjct: 245 LCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC-DRAEVNMALRLITRMTKENVMP 303
Query: 736 YSSTCELLRNKLIGWG-FAEKTDILADKMDRSTSKSIQEAANLMRG 870
T ++ L+ G F T++ R S+ + ++ G
Sbjct: 304 DRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 349
>gb|EXB67320.1| hypothetical protein L484_025802 [Morus notabilis]
Length = 529
Score = 429 bits (1102), Expect = e-117
Identities = 203/292 (69%), Positives = 247/292 (84%)
Frame = +1
Query: 1 VKTYSIMIRGWGDIGDSGEAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFK 180
VKT+SI+IRGWGD+GD+ A++LFDEML+RG +D+LA+NS L ALCKGG DEAYE+F+
Sbjct: 224 VKTFSILIRGWGDLGDASHARELFDEMLQRGCFLDVLAYNSYLEALCKGGSADEAYEIFR 283
Query: 181 GMRAKGLEPDAYSYSIFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKND 360
GM+ KG+ PDA +YS+FI CEAND+HS FRVLD M+RY+L+PNVFTYN IIKKLCKN+
Sbjct: 284 GMKEKGVSPDACTYSVFIRTYCEANDIHSVFRVLDRMRRYDLLPNVFTYNLIIKKLCKNE 343
Query: 361 KIDEAYELLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYN 540
K+DEAY+LL+EMIE G PD+WSYN ILAFHCDH EV+RA +L+SRM +D C+ D HTYN
Sbjct: 344 KVDEAYQLLEEMIENGVRPDSWSYNAILAFHCDHCEVHRALRLLSRMEKD-CKPDRHTYN 402
Query: 541 MVLKMLIRIGRFDRVEKVWYSMEERGFHPTVSTYAVMIHGLCKKRGKLEEAYKYFEMMID 720
MVLK+LI IGRFDR+ +VW +M +GF+P+VSTYAVMIHGLCKK+GKLEEA KYFE MID
Sbjct: 403 MVLKLLIGIGRFDRMTEVWENMAVKGFYPSVSTYAVMIHGLCKKKGKLEEACKYFETMID 462
Query: 721 EGIPPYSSTCELLRNKLIGWGFAEKTDILADKMDRSTSKSIQEAANLMRGNR 876
EGIPPYS+T E+LRN+L+G G E DI+A KM+RSTS IQE ANLMRG R
Sbjct: 463 EGIPPYSTTVEMLRNRLLGLGLLEHIDIIARKMERSTSCLIQEFANLMRGGR 514
Score = 108 bits (270), Expect = 7e-21
Identities = 72/273 (26%), Positives = 129/273 (47%), Gaps = 1/273 (0%)
Frame = +1
Query: 55 EAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFKGMRAKGLEPDAYSYSIFI 234
+A + F+ M+E G + + +L+ALCK V A+E F ++ G EP ++SI I
Sbjct: 173 DAIRAFNRMVEFGVKPCVHDLDQLLYALCKRKHVKHAHEFFDKVKG-GFEPSVKTFSILI 231
Query: 235 HASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKNDKIDEAYELLDEMIEKGAI 414
+ D A + D M + +V YN ++ LCK DEAYE+ M EKG
Sbjct: 232 RGWGDLGDASHARELFDEMLQRGCFLDVLAYNSYLEALCKGGSADEAYEIFRGMKEKGVS 291
Query: 415 PDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYNMVLKMLIRIGRFDRVEKV 594
PD +Y+ + +C+ N+++ F+++ RM + + TYN+++K L + + D ++
Sbjct: 292 PDACTYSVFIRTYCEANDIHSVFRVLDRMRRYDLLPNVFTYNLIIKKLCKNEKVDEAYQL 351
Query: 595 WYSMEERGFHPTVSTYAVMIHGLCKKRGKLEEAYKYFEMMIDEGIPPYSSTCELLRNKLI 774
M E G P +Y ++ C ++ A + M ++ P T ++ LI
Sbjct: 352 LEEMIENGVRPDSWSYNAILAFHC-DHCEVHRALRLLSRM-EKDCKPDRHTYNMVLKLLI 409
Query: 775 GWG-FAEKTDILADKMDRSTSKSIQEAANLMRG 870
G G F T++ + + S+ A ++ G
Sbjct: 410 GIGRFDRMTEVWENMAVKGFYPSVSTYAVMIHG 442
Score = 71.2 bits (173), Expect = 1e-09
Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 34/206 (16%)
Frame = +1
Query: 226 IFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKNDKIDEAYELLDEMIEK 405
I A C AN A R + M + + P V + ++ LCK + A+E D+ ++
Sbjct: 160 IVFRAYCRANLPRDAIRAFNRMVEFGVKPCVHDLDQLLYALCKRKHVKHAHEFFDK-VKG 218
Query: 406 GAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYNMVLKMLIRIGRFDRV 585
G P +++ ++ D + + A +L M Q C D YN L+ L + G D
Sbjct: 219 GFEPSVKTFSILIRGWGDLGDASHARELFDEMLQRGCFLDVLAYNSYLEALCKGGSADEA 278
Query: 586 EKVWYSMEERGFHPTVSTYAVMIHGLCK-------------------------------- 669
+++ M+E+G P TY+V I C+
Sbjct: 279 YEIFRGMKEKGVSPDACTYSVFIRTYCEANDIHSVFRVLDRMRRYDLLPNVFTYNLIIKK 338
Query: 670 --KRGKLEEAYKYFEMMIDEGIPPYS 741
K K++EAY+ E MI+ G+ P S
Sbjct: 339 LCKNEKVDEAYQLLEEMIENGVRPDS 364
>gb|EOY26490.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma cacao]
Length = 520
Score = 427 bits (1099), Expect = e-117
Identities = 201/299 (67%), Positives = 249/299 (83%)
Frame = +1
Query: 4 KTYSIMIRGWGDIGDSGEAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFKG 183
K+YSI++RGWGDIG++ +A+K+FDEM++RG ++D+LA+N +L ALCK G VDEAY++F
Sbjct: 215 KSYSILVRGWGDIGEACQARKVFDEMVQRGCSIDVLAYNCLLEALCKSGNVDEAYKMFGA 274
Query: 184 MRAKGLEPDAYSYSIFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKNDK 363
M + +E DA SYS+FI A CEAND+H+AFRVLD M+RYNLVPN+FTYNCII+KLC NDK
Sbjct: 275 MGSSRIELDACSYSVFIRAYCEANDIHAAFRVLDRMRRYNLVPNLFTYNCIIRKLCNNDK 334
Query: 364 IDEAYELLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYNM 543
+DEAY+LL EMIE+G PD WSYN ILA+HC+H+EVNRA LISRM +++C D HTYNM
Sbjct: 335 VDEAYQLLTEMIERGISPDEWSYNAILAYHCEHSEVNRALNLISRMEKNECFPDRHTYNM 394
Query: 544 VLKMLIRIGRFDRVEKVWYSMEERGFHPTVSTYAVMIHGLCKKRGKLEEAYKYFEMMIDE 723
LK+LIRIGRFDR ++W SM RGF+P+VSTYAVMIHGLCKKRGKLEEA +YFE+MIDE
Sbjct: 395 ALKLLIRIGRFDRATELWESMANRGFYPSVSTYAVMIHGLCKKRGKLEEACRYFEIMIDE 454
Query: 724 GIPPYSSTCELLRNKLIGWGFAEKTDILADKMDRSTSKSIQEAANLMRGNREALRLRSD 900
GIPPYSST ELLRN+L+G GF + +ILA+KM RS+S SIQE AN MRG R RS+
Sbjct: 455 GIPPYSSTVELLRNRLLGLGFLDNIEILANKMARSSSCSIQELANAMRGKTAYRRTRSE 513
Score = 70.9 bits (172), Expect = 2e-09
Identities = 51/215 (23%), Positives = 85/215 (39%), Gaps = 34/215 (15%)
Frame = +1
Query: 193 KGLEPDAYSYSIFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKNDKIDE 372
K E + + + A C AN A R D M + + P++ + ++ LCK + +
Sbjct: 139 KQFEINPEIFWVVFRAYCRANLPGDAIRAFDRMVEFGIRPSIHDVDQLLFVLCKRKHVKQ 198
Query: 373 A-----------------YELL-----------------DEMIEKGAIPDTWSYNTILAF 450
A Y +L DEM+++G D +YN +L
Sbjct: 199 AQGFFDRVKHEFEPSAKSYSILVRGWGDIGEACQARKVFDEMVQRGCSIDVLAYNCLLEA 258
Query: 451 HCDHNEVNRAFKLISRMGQDKCERDTHTYNMVLKMLIRIGRFDRVEKVWYSMEERGFHPT 630
C V+ A+K+ MG + E D +Y++ ++ +V M P
Sbjct: 259 LCKSGNVDEAYKMFGAMGSSRIELDACSYSVFIRAYCEANDIHAAFRVLDRMRRYNLVPN 318
Query: 631 VSTYAVMIHGLCKKRGKLEEAYKYFEMMIDEGIPP 735
+ TY +I LC K++EAY+ MI+ GI P
Sbjct: 319 LFTYNCIIRKLC-NNDKVDEAYQLLTEMIERGISP 352
>ref|XP_002305285.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550340729|gb|EEE85796.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 523
Score = 426 bits (1096), Expect = e-116
Identities = 199/299 (66%), Positives = 252/299 (84%)
Frame = +1
Query: 4 KTYSIMIRGWGDIGDSGEAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFKG 183
KTYSI++RGWGDIG++ EA+K+FDEML RG +D+LA+NS+L ALCKGG VDEAY++F+
Sbjct: 218 KTYSILVRGWGDIGEAVEARKVFDEMLGRGCALDVLAYNSLLEALCKGGNVDEAYKMFRE 277
Query: 184 MRAKGLEPDAYSYSIFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKNDK 363
+ + G+EPDA SY+IFI A CEAN++HS F VLD MKRY+LVPNVFTYNCIIKKLCKN K
Sbjct: 278 IGSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGK 337
Query: 364 IDEAYELLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYNM 543
+++AY+LL EM+E+G PD WSYNTILA+HC+H+EVNRA KLIS M +D C D H+YNM
Sbjct: 338 VEDAYQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNM 397
Query: 544 VLKMLIRIGRFDRVEKVWYSMEERGFHPTVSTYAVMIHGLCKKRGKLEEAYKYFEMMIDE 723
+LK+L+R+GRFDR ++W SM ERGF+P+VSTY+VMIHGLCKK+GKLEEA +YFE MIDE
Sbjct: 398 LLKLLVRVGRFDRATEIWESMGERGFYPSVSTYSVMIHGLCKKKGKLEEACRYFETMIDE 457
Query: 724 GIPPYSSTCELLRNKLIGWGFAEKTDILADKMDRSTSKSIQEAANLMRGNREALRLRSD 900
GIPPY+ST E+LRN+LIG+G + +ILA KM+R TS SIQE A MRGN+ +R R++
Sbjct: 458 GIPPYASTIEMLRNRLIGFGLLDHIEILACKMERGTSCSIQELAKEMRGNKACVRSRNE 516
Score = 107 bits (268), Expect = 1e-20
Identities = 71/286 (24%), Positives = 131/286 (45%), Gaps = 1/286 (0%)
Frame = +1
Query: 16 IMIRGWGDIGDSGEAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFKGMRAK 195
++ R + +A + FD M E G + + +L+ LCK V A + F ++ K
Sbjct: 153 LVFRSYSRANLPSDAIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHK 212
Query: 196 GLEPDAYSYSIFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKNDKIDEA 375
E A +YSI + + + A +V D M +V YN +++ LCK +DEA
Sbjct: 213 -FEAKAKTYSILVRGWGDIGEAVEARKVFDEMLGRGCALDVLAYNSLLEALCKGGNVDEA 271
Query: 376 YELLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYNMVLKM 555
Y++ E+ G PD SY + +C+ N ++ F ++ RM + + TYN ++K
Sbjct: 272 YKMFREIGSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKK 331
Query: 556 LIRIGRFDRVEKVWYSMEERGFHPTVSTYAVMIHGLCKKRGKLEEAYKYFEMMIDEGIPP 735
L + G+ + ++ + M ERG P +Y ++ C + ++ A K +M+ + P
Sbjct: 332 LCKNGKVEDAYQLLHEMMERGVSPDAWSYNTILAYHC-EHSEVNRATKLISIMVKDNCLP 390
Query: 736 YSSTCELLRNKLIGWG-FAEKTDILADKMDRSTSKSIQEAANLMRG 870
+ +L L+ G F T+I +R S+ + ++ G
Sbjct: 391 DRHSYNMLLKLLVRVGRFDRATEIWESMGERGFYPSVSTYSVMIHG 436
>ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 419 bits (1076), Expect = e-114
Identities = 200/309 (64%), Positives = 246/309 (79%), Gaps = 2/309 (0%)
Frame = +1
Query: 1 VKTYSIMIRGWGDIGDSGEAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFK 180
VKTYSI+ RGWG +GDS AQK+FDEM ERG +D+LA+NS+L ALCKGGK DEAY++F
Sbjct: 220 VKTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFL 279
Query: 181 GMRAKGLEPDAYSYSIFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKND 360
M + G++PDA +YSIFI +SC+ NDLH+ +RVL+ KR NL+PNVFTYNC+IKKLCK+
Sbjct: 280 EMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQ 339
Query: 361 KIDEAYELLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYN 540
++EAY++LDEMIE+G PDTWSYN I A+HCDH+EVN A L+ RM +DKC D HTYN
Sbjct: 340 NVEEAYQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYN 399
Query: 541 MVLKMLIRIGRFDRVEKVWYSMEERGFHPTVSTYAVMIHGLCKKRGKLEEAYKYFEMMID 720
MVLK+L+R+GRFDR +VW SM +RGF+P+VSTYAVMIHG CKK+ KLEEA KYFEMMID
Sbjct: 400 MVLKLLVRVGRFDRANEVWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMID 459
Query: 721 EGIPPYSSTCELLRNKLIGWGFAEKTDILADKMDRSTSKSIQEAANLMRG--NREALRLR 894
EGIPPY +T ELLR++L+G GF ++ IL DKM RSTS SIQE ANLM G REA +
Sbjct: 460 EGIPPYIATVELLRDRLLGIGFKDQVAILGDKMKRSTSCSIQELANLMSGGKRREAQSML 519
Query: 895 SDGEFSDES 921
+ E ES
Sbjct: 520 KNEETEHES 528
>ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 419 bits (1076), Expect = e-114
Identities = 200/309 (64%), Positives = 246/309 (79%), Gaps = 2/309 (0%)
Frame = +1
Query: 1 VKTYSIMIRGWGDIGDSGEAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFK 180
VKTYSI+ RGWG +GDS AQK+FDEM ERG +D+LA+NS+L ALCKGGK DEAY++F
Sbjct: 220 VKTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFL 279
Query: 181 GMRAKGLEPDAYSYSIFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKND 360
M + G++PDA +YSIFI +SC+ NDLH+ +RVL+ KR NL+PNVFTYNC+IKKLCK+
Sbjct: 280 EMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQ 339
Query: 361 KIDEAYELLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYN 540
++EAY++LDEMIE+G PDTWSYN I A+HCDH+EVN A L+ RM +DKC D HTYN
Sbjct: 340 NVEEAYQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYN 399
Query: 541 MVLKMLIRIGRFDRVEKVWYSMEERGFHPTVSTYAVMIHGLCKKRGKLEEAYKYFEMMID 720
MVLK+L+R+GRFDR +VW SM +RGF+P+VSTYAVMIHG CKK+ KLEEA KYFEMMID
Sbjct: 400 MVLKLLVRVGRFDRANEVWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMID 459
Query: 721 EGIPPYSSTCELLRNKLIGWGFAEKTDILADKMDRSTSKSIQEAANLMRG--NREALRLR 894
EGIPPY +T ELLR++L+G GF ++ IL DKM RSTS SIQE ANLM G REA +
Sbjct: 460 EGIPPYIATVELLRDRLLGIGFKDQVAILGDKMKRSTSCSIQELANLMSGGKRREAQSML 519
Query: 895 SDGEFSDES 921
+ E ES
Sbjct: 520 KNEETEHES 528
>ref|XP_002894392.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297340234|gb|EFH70651.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 525
Score = 414 bits (1064), Expect = e-113
Identities = 196/309 (63%), Positives = 251/309 (81%)
Frame = +1
Query: 4 KTYSIMIRGWGDIGDSGEAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFKG 183
KTYSI++RGW I D+ A+K+FDEMLE VDLLA+N++L ALCK G VD AY++F+
Sbjct: 209 KTYSILVRGWARIRDASGARKVFDEMLENNCVVDLLAYNALLDALCKSGDVDGAYKMFQE 268
Query: 184 MRAKGLEPDAYSYSIFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKNDK 363
M GL+PDAYS++IFIH+ C+A+D+HSA++VLD MKRY+LVPNV+T+N IIK LCKN+K
Sbjct: 269 MGNLGLKPDAYSFAIFIHSYCDASDVHSAYQVLDRMKRYDLVPNVYTFNHIIKTLCKNEK 328
Query: 364 IDEAYELLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYNM 543
+D+AY LLDEMI+KGA PDTW+YN+I+A+HCDH EVNRA KL+SRM + KC D HTYNM
Sbjct: 329 VDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNM 388
Query: 544 VLKMLIRIGRFDRVEKVWYSMEERGFHPTVSTYAVMIHGLCKKRGKLEEAYKYFEMMIDE 723
VLK+LIRIGRFDRV ++W M ER F+PTV+TY VMIHGL +K+GKLEEA +YFEMMIDE
Sbjct: 389 VLKLLIRIGRFDRVTEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDE 448
Query: 724 GIPPYSSTCELLRNKLIGWGFAEKTDILADKMDRSTSKSIQEAANLMRGNREALRLRSDG 903
GIPPYS+T E+LRN+L+GWG + D+LA KM+RS+S S+++ A MRG R L RS+G
Sbjct: 449 GIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKMERSSSCSVRDMAVEMRGKRRRLGRRSEG 508
Query: 904 EFSDESCDE 930
D+ D+
Sbjct: 509 SEDDDDDDD 517
Score = 110 bits (276), Expect = 1e-21
Identities = 60/213 (28%), Positives = 107/213 (50%)
Frame = +1
Query: 4 KTYSIMIRGWGDIGDSGEAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFKG 183
K + I+ R + EA + F+ M+E G + + +LH+LC V+ A E F
Sbjct: 139 KVFWIVFRAYSRANLPSEASRAFNRMVEFGIKPCVDDLDQLLHSLCDRKHVNHAQEFFDK 198
Query: 184 MRAKGLEPDAYSYSIFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKNDK 363
+ G+ P A +YSI + D A +V D M N V ++ YN ++ LCK+
Sbjct: 199 AKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLENNCVVDLLAYNALLDALCKSGD 258
Query: 364 IDEAYELLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYNM 543
+D AY++ EM G PD +S+ + +CD ++V+ A++++ RM + + +T+N
Sbjct: 259 VDGAYKMFQEMGNLGLKPDAYSFAIFIHSYCDASDVHSAYQVLDRMKRYDLVPNVYTFNH 318
Query: 544 VLKMLIRIGRFDRVEKVWYSMEERGFHPTVSTY 642
++K L + + D + M ++G +P TY
Sbjct: 319 IIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTY 351
Score = 81.6 bits (200), Expect = 9e-13
Identities = 60/250 (24%), Positives = 112/250 (44%), Gaps = 5/250 (2%)
Frame = +1
Query: 1 VKTYSIMIRGWGDIGDSGEAQKLFDEMLE-RGYN----VDLLAWNSVLHALCKGGKVDEA 165
+++Y I++ +G S + L+D ++E R YN + W V A + EA
Sbjct: 102 LESYHILVE---ILGCSKQFALLWDFLIEAREYNYFEITSKVFW-IVFRAYSRANLPSEA 157
Query: 166 YELFKGMRAKGLEPDAYSYSIFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKK 345
F M G++P +H+ C+ ++ A D K + +VP+ TY+ +++
Sbjct: 158 SRAFNRMVEFGIKPCVDDLDQLLHSLCDRKHVNHAQEFFDKAKGFGIVPSAKTYSILVRG 217
Query: 346 LCKNDKIDEAYELLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERD 525
+ A ++ DEM+E + D +YN +L C +V+ A+K+ MG + D
Sbjct: 218 WARIRDASGARKVFDEMLENNCVVDLLAYNALLDALCKSGDVDGAYKMFQEMGNLGLKPD 277
Query: 526 THTYNMVLKMLIRIGRFDRVEKVWYSMEERGFHPTVSTYAVMIHGLCKKRGKLEEAYKYF 705
+++ + + +V M+ P V T+ +I LCK K+++AY
Sbjct: 278 AYSFAIFIHSYCDASDVHSAYQVLDRMKRYDLVPNVYTFNHIIKTLCKNE-KVDDAYLLL 336
Query: 706 EMMIDEGIPP 735
+ MI +G P
Sbjct: 337 DEMIQKGANP 346
>ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223529547|gb|EEF31500.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 519
Score = 413 bits (1062), Expect = e-112
Identities = 195/299 (65%), Positives = 247/299 (82%)
Frame = +1
Query: 4 KTYSIMIRGWGDIGDSGEAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFKG 183
KTYSI++RGWGDIG+S A K+FDEM E+ VD+LA+NS+L A CKGGKV EAY++F+
Sbjct: 214 KTYSILVRGWGDIGESVSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFRE 273
Query: 184 MRAKGLEPDAYSYSIFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKNDK 363
M + G++PDA ++SIFI A CEAND+H A+RVLD MKRY+LVPNVFTYNC+IKKLCK +K
Sbjct: 274 MGSNGIKPDACTFSIFIRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEK 333
Query: 364 IDEAYELLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYNM 543
++EAY+LL+E+IE+ PD WSYN ILA+HC+H+EVN A +LISRM +D C D H+YNM
Sbjct: 334 VEEAYQLLNEIIERSGQPDAWSYNAILAYHCEHSEVNSATRLISRMVKDNCLPDKHSYNM 393
Query: 544 VLKMLIRIGRFDRVEKVWYSMEERGFHPTVSTYAVMIHGLCKKRGKLEEAYKYFEMMIDE 723
+LK+LIR+GRFDR +VW SM E+GF+P+VSTY+VM+HGLCKK+GKLEEA KYFEMMIDE
Sbjct: 394 LLKLLIRVGRFDRAIEVWESMGEKGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMIDE 453
Query: 724 GIPPYSSTCELLRNKLIGWGFAEKTDILADKMDRSTSKSIQEAANLMRGNREALRLRSD 900
GIPPYSST E+LRN+LIG G + +ILA KM+ ST+ SIQE A MRG + +R RS+
Sbjct: 454 GIPPYSSTVEILRNRLIGLGLLDYIEILAGKMEHSTACSIQELAIAMRGGKVHVRSRSE 512
>ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g52640, mitochondrial; Flags: Precursor
gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535
DUF domains [Arabidopsis thaliana]
gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis
thaliana] gi|62320530|dbj|BAD95108.1| hypothetical
protein [Arabidopsis thaliana]
gi|332194712|gb|AEE32833.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 412 bits (1058), Expect = e-112
Identities = 196/310 (63%), Positives = 248/310 (80%)
Frame = +1
Query: 4 KTYSIMIRGWGDIGDSGEAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFKG 183
KTYSI++RGW I D+ A+K+FDEMLER VDLLA+N++L ALCK G VD Y++F+
Sbjct: 209 KTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQE 268
Query: 184 MRAKGLEPDAYSYSIFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKNDK 363
M GL+PDAYS++IFIHA C+A D+HSA++VLD MKRY+LVPNV+T+N IIK LCKN+K
Sbjct: 269 MGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEK 328
Query: 364 IDEAYELLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYNM 543
+D+AY LLDEMI+KGA PDTW+YN+I+A+HCDH EVNRA KL+SRM + KC D HTYNM
Sbjct: 329 VDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNM 388
Query: 544 VLKMLIRIGRFDRVEKVWYSMEERGFHPTVSTYAVMIHGLCKKRGKLEEAYKYFEMMIDE 723
VLK+LIRIGRFDR ++W M ER F+PTV+TY VMIHGL +K+GKLEEA +YFEMMIDE
Sbjct: 389 VLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDE 448
Query: 724 GIPPYSSTCELLRNKLIGWGFAEKTDILADKMDRSTSKSIQEAANLMRGNREALRLRSDG 903
GIPPYS+T E+LRN+L+GWG + D+LA KM+RS+S S+Q+ A MRG R L RS+
Sbjct: 449 GIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKMERSSSCSVQDMAVEMRGKRRRLGRRSEN 508
Query: 904 EFSDESCDEM 933
D+ E+
Sbjct: 509 SEDDDDDFEL 518
Score = 108 bits (271), Expect = 5e-21
Identities = 60/213 (28%), Positives = 105/213 (49%)
Frame = +1
Query: 4 KTYSIMIRGWGDIGDSGEAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFKG 183
K + I+ R + EA + F+ M+E G + + +LH+LC V+ A E F
Sbjct: 139 KVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGK 198
Query: 184 MRAKGLEPDAYSYSIFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKNDK 363
+ G+ P A +YSI + D A +V D M N V ++ YN ++ LCK+
Sbjct: 199 AKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGD 258
Query: 364 IDEAYELLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYNM 543
+D Y++ EM G PD +S+ + +CD +V+ A+K++ RM + + +T+N
Sbjct: 259 VDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNH 318
Query: 544 VLKMLIRIGRFDRVEKVWYSMEERGFHPTVSTY 642
++K L + + D + M ++G +P TY
Sbjct: 319 IIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTY 351
Score = 83.6 bits (205), Expect = 2e-13
Identities = 59/249 (23%), Positives = 112/249 (44%), Gaps = 4/249 (1%)
Frame = +1
Query: 1 VKTYSIMIRGWGDIGDSGEAQKLFDEMLE-RGYN---VDLLAWNSVLHALCKGGKVDEAY 168
+++Y I++ +G S + L+D ++E R YN + + V A + EA
Sbjct: 102 LESYHILVE---ILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEAC 158
Query: 169 ELFKGMRAKGLEPDAYSYSIFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKL 348
F M G++P +H+ C+ ++ A K + +VP+ TY+ +++
Sbjct: 159 RAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGW 218
Query: 349 CKNDKIDEAYELLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDT 528
+ A ++ DEM+E+ + D +YN +L C +V+ +K+ MG + D
Sbjct: 219 ARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDA 278
Query: 529 HTYNMVLKMLIRIGRFDRVEKVWYSMEERGFHPTVSTYAVMIHGLCKKRGKLEEAYKYFE 708
+++ + + G KV M+ P V T+ +I LCK K+++AY +
Sbjct: 279 YSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNE-KVDDAYLLLD 337
Query: 709 MMIDEGIPP 735
MI +G P
Sbjct: 338 EMIQKGANP 346
>ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 411 bits (1057), Expect = e-112
Identities = 198/306 (64%), Positives = 246/306 (80%)
Frame = +1
Query: 4 KTYSIMIRGWGDIGDSGEAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFKG 183
KTYSI+I GWG+IGDS +A LF MLE+G VDLLA+N++L ALCKGG+VDEA +F
Sbjct: 217 KTYSILISGWGEIGDSEKACDLFQAMLEQGCPVDLLAYNNLLQALCKGGRVDEAKNIFHD 276
Query: 184 MRAKGLEPDAYSYSIFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKNDK 363
M +K +EPDA++YSIFIH+ C+A+D+ SAFRVLD M+RYNL+PNVFTYNCIIK+LCKN+
Sbjct: 277 MLSKRVEPDAFTYSIFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEH 336
Query: 364 IDEAYELLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYNM 543
++EAY+LLDEMI +G PDTWSYN I A+HCDH EVNRA +L+ RM +D C D HTYNM
Sbjct: 337 VEEAYQLLDEMISRGVKPDTWSYNAIQAYHCDHCEVNRALRLMFRMEKDICLPDRHTYNM 396
Query: 544 VLKMLIRIGRFDRVEKVWYSMEERGFHPTVSTYAVMIHGLCKKRGKLEEAYKYFEMMIDE 723
VLK+LIRIGRFD+V +VW +M ++ F+P+VSTY+VMIHG CKK+GKLEEA KYFEMMIDE
Sbjct: 397 VLKLLIRIGRFDKVTEVWENMVDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDE 456
Query: 724 GIPPYSSTCELLRNKLIGWGFAEKTDILADKMDRSTSKSIQEAANLMRGNREALRLRSDG 903
GIPPY +T E+LRN+L+G GF + +ILA KM +STS +IQE AN+M GNR A
Sbjct: 457 GIPPYVTTVEMLRNRLLGLGFIDHIEILAAKMRQSTSYAIQELANIMIGNRTAHNTLGRD 516
Query: 904 EFSDES 921
E ES
Sbjct: 517 EMDIES 522
>ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 408 bits (1048), Expect = e-111
Identities = 194/291 (66%), Positives = 240/291 (82%)
Frame = +1
Query: 4 KTYSIMIRGWGDIGDSGEAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFKG 183
KTYSI+I GWGDIGDS +A +LF MLE+G VDLLA+N++L ALCKGG VDEA +F
Sbjct: 217 KTYSILISGWGDIGDSEKAHELFQAMLEQGCPVDLLAYNNLLQALCKGGCVDEAKTIFHD 276
Query: 184 MRAKGLEPDAYSYSIFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKNDK 363
M +K +EPDA++YSIFIH+ C+A+D+ SA RVLD M+RYN++PNVFTYNCIIK+LCKN+
Sbjct: 277 MLSKRVEPDAFTYSIFIHSYCDADDVQSALRVLDKMRRYNILPNVFTYNCIIKRLCKNEH 336
Query: 364 IDEAYELLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYNM 543
++EAY LLDEMI +G PDTWSYN I A+HCDH EVNRA +L+ RM +D C D HTYNM
Sbjct: 337 VEEAYLLLDEMISRGVRPDTWSYNAIQAYHCDHCEVNRAIRLMFRMEKDNCLPDRHTYNM 396
Query: 544 VLKMLIRIGRFDRVEKVWYSMEERGFHPTVSTYAVMIHGLCKKRGKLEEAYKYFEMMIDE 723
VLK+LIRIGRFD+V KVW +M ++ F+P+VSTY+VMIHG CKK+GKLEEA KYFEMMIDE
Sbjct: 397 VLKLLIRIGRFDKVTKVWGNMGDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDE 456
Query: 724 GIPPYSSTCELLRNKLIGWGFAEKTDILADKMDRSTSKSIQEAANLMRGNR 876
GIPPY +T E+LRN+L+G GF + +ILA KM +STS +IQE AN+M GNR
Sbjct: 457 GIPPYVTTVEMLRNQLLGLGFLDHIEILAAKMRQSTSYAIQELANIMIGNR 507
Score = 80.5 bits (197), Expect = 2e-12
Identities = 65/289 (22%), Positives = 129/289 (44%), Gaps = 4/289 (1%)
Frame = +1
Query: 16 IMIRGWGDIGDSGEAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFKGMRAK 195
++ R + A + F+ M E G + ++ +L LCK V +A + F + +
Sbjct: 152 LIFRAYSQANLPDGAIRSFNRMDEFGIKPTINDFDKLLFILCKTKHVKQAQQFFDQAKNR 211
Query: 196 GLEPDAYSYSIFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKNDKIDEA 375
L A +YSI I + D A + +M ++ YN +++ LCK +DEA
Sbjct: 212 FLLT-AKTYSILISGWGDIGDSEKAHELFQAMLEQGCPVDLLAYNNLLQALCKGGCVDEA 270
Query: 376 YELLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYNMVLKM 555
+ +M+ K PD ++Y+ + +CD ++V A +++ +M + + TYN ++K
Sbjct: 271 KTIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSALRVLDKMRRYNILPNVFTYNCIIK- 329
Query: 556 LIRIGRFDRVEKVWYSMEE---RGFHPTVSTYAVMIHGLCKKRGKLEEAYKYFEMMIDEG 726
R+ + + VE+ + ++E RG P +Y + C ++ A + M +
Sbjct: 330 --RLCKNEHVEEAYLLLDEMISRGVRPDTWSYNAIQAYHC-DHCEVNRAIRLMFRMEKDN 386
Query: 727 IPPYSSTCELLRNKLIGWG-FAEKTDILADKMDRSTSKSIQEAANLMRG 870
P T ++ LI G F + T + + D+ S+ + ++ G
Sbjct: 387 CLPDRHTYNMVLKLLIRIGRFDKVTKVWGNMGDKKFYPSVSTYSVMIHG 435
>ref|XP_006392896.1| hypothetical protein EUTSA_v10011389mg [Eutrema salsugineum]
gi|557089474|gb|ESQ30182.1| hypothetical protein
EUTSA_v10011389mg [Eutrema salsugineum]
Length = 523
Score = 405 bits (1042), Expect = e-110
Identities = 197/316 (62%), Positives = 252/316 (79%), Gaps = 3/316 (0%)
Frame = +1
Query: 4 KTYSIMIRGWGDIGDSGEAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFKG 183
KTYSI++RGW I D+ A+K+FDEMLE VDLLA+N+ L ALCK G VD AY++F+
Sbjct: 208 KTYSILVRGWARIRDASGARKVFDEMLETNCPVDLLAYNASLDALCKSGDVDGAYKMFQE 267
Query: 184 MRAKGLEPDAYSYSIFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKNDK 363
M GLEPDAYSY+IFIHA C+A+D+HSA++VLD M+RY LVPNV+TYN IIK LCK ++
Sbjct: 268 MGNLGLEPDAYSYAIFIHAYCDADDVHSAYKVLDRMQRYELVPNVYTYNHIIKTLCKKER 327
Query: 364 IDEAYELLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYNM 543
+D+AY LLDEMI++GA PDTW+YN+I+A+HCDH EVNRA KLISRM + KC D HTYNM
Sbjct: 328 VDDAYLLLDEMIQRGANPDTWTYNSIMAYHCDHCEVNRATKLISRMDRTKCLPDRHTYNM 387
Query: 544 VLKMLIRIGRFDRVEKVWYSMEERGFHPTVSTYAVMIHGLCKKRGKLEEAYKYFEMMIDE 723
VLK+LIRIGRFDRV ++W M ER F+PTV+TY VMIHGL +K+GK+EEA +YFEMMID+
Sbjct: 388 VLKLLIRIGRFDRVTEMWEGMSEREFYPTVATYTVMIHGLVRKKGKIEEACRYFEMMIDD 447
Query: 724 GIPPYSSTCELLRNKLIGWGFAEKTDILADKMDRSTSKSIQEAANLMRGNREALRLRSDG 903
GIPPYS+T E+LRN+L+GWG + D+LA KM+RS+S S++E A MRG R + +S+
Sbjct: 448 GIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKMERSSSCSVREMAVEMRGKRRRVGRKSE- 506
Query: 904 EFSDESCD---EMRES 942
E D+ D +MRE+
Sbjct: 507 ESEDDDDDIELDMREN 522
Score = 114 bits (286), Expect = 1e-22
Identities = 65/213 (30%), Positives = 108/213 (50%)
Frame = +1
Query: 4 KTYSIMIRGWGDIGDSGEAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFKG 183
K + I+ R + GEA + F+ M+E G + + +LH+LC V+ A + F
Sbjct: 139 KVFWIVFRAYSRANLPGEASRAFNRMIEFGIKPCVDDLDQLLHSLCDRKHVNHAQDFFDR 198
Query: 184 MRAKGLEPDAYSYSIFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKNDK 363
+A G+ P A +YSI + D A +V D M N ++ YN + LCK+
Sbjct: 199 AKA-GIAPSAKTYSILVRGWARIRDASGARKVFDEMLETNCPVDLLAYNASLDALCKSGD 257
Query: 364 IDEAYELLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYNM 543
+D AY++ EM G PD +SY + +CD ++V+ A+K++ RM + + + +TYN
Sbjct: 258 VDGAYKMFQEMGNLGLEPDAYSYAIFIHAYCDADDVHSAYKVLDRMQRYELVPNVYTYNH 317
Query: 544 VLKMLIRIGRFDRVEKVWYSMEERGFHPTVSTY 642
++K L + R D + M +RG +P TY
Sbjct: 318 IIKTLCKKERVDDAYLLLDEMIQRGANPDTWTY 350
>ref|XP_004305328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 734
Score = 405 bits (1042), Expect = e-110
Identities = 193/284 (67%), Positives = 234/284 (82%)
Frame = +1
Query: 4 KTYSIMIRGWGDIGDSGEAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFKG 183
KTYSI++RGWGDI DS A+KLFDEM E+G VD+ A+NS L ALCKGG VDEAY++F+
Sbjct: 358 KTYSILMRGWGDICDSDNARKLFDEMTEKGCLVDVPAYNSYLEALCKGGNVDEAYKIFRE 417
Query: 184 MRAKGLEPDAYSYSIFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKNDK 363
M +KG+EPDA +YSIFI A CEAND+HS F VLD MKRYNL+ NVFTYNC+IKKLCKN++
Sbjct: 418 MGSKGVEPDAGTYSIFIRAYCEANDIHSVFSVLDRMKRYNLLANVFTYNCVIKKLCKNER 477
Query: 364 IDEAYELLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYNM 543
++EAY+LLDEMIE G PD WSYN I A+HC+H EVN+A +L+SRM +D C D HTYNM
Sbjct: 478 VEEAYQLLDEMIEMGVKPDEWSYNAIQAYHCEHGEVNQALRLLSRMEKDSCMPDHHTYNM 537
Query: 544 VLKMLIRIGRFDRVEKVWYSMEERGFHPTVSTYAVMIHGLCKKRGKLEEAYKYFEMMIDE 723
VLK+LIRIGRFDR VW M +RGF+P+VSTY+VMIHGLCKK+ KLEEA KYFE+MIDE
Sbjct: 538 VLKLLIRIGRFDRATDVWERMGKRGFYPSVSTYSVMIHGLCKKKHKLEEACKYFEIMIDE 597
Query: 724 GIPPYSSTCELLRNKLIGWGFAEKTDILADKMDRSTSKSIQEAA 855
GIPPYSST E+LRN+L+G G + +ILA KM++S+S S QE A
Sbjct: 598 GIPPYSSTVEMLRNRLLGLGLLDDIEILARKMEQSSSCSTQEFA 641
Score = 103 bits (257), Expect = 2e-19
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 1/273 (0%)
Frame = +1
Query: 55 EAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFKGMRAKGLEPDAYSYSIFI 234
+A + + M+E G + + +L+ LCK V A E F +++ G E A +YSI +
Sbjct: 306 DAIRAYSRMVEFGIKPSIHDLDHLLYTLCKRKHVKHAQEFFDKVKS-GFELGAKTYSILM 364
Query: 235 HASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKNDKIDEAYELLDEMIEKGAI 414
+ D +A ++ D M + +V YN ++ LCK +DEAY++ EM KG
Sbjct: 365 RGWGDICDSDNARKLFDEMTEKGCLVDVPAYNSYLEALCKGGNVDEAYKIFREMGSKGVE 424
Query: 415 PDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYNMVLKMLIRIGRFDRVEKV 594
PD +Y+ + +C+ N+++ F ++ RM + + TYN V+K L + R + ++
Sbjct: 425 PDAGTYSIFIRAYCEANDIHSVFSVLDRMKRYNLLANVFTYNCVIKKLCKNERVEEAYQL 484
Query: 595 WYSMEERGFHPTVSTYAVMIHGLCKKRGKLEEAYKYFEMMIDEGIPPYSSTCELLRNKLI 774
M E G P +Y + C + G++ +A + M + P T ++ LI
Sbjct: 485 LDEMIEMGVKPDEWSYNAIQAYHC-EHGEVNQALRLLSRMEKDSCMPDHHTYNMVLKLLI 543
Query: 775 GWG-FAEKTDILADKMDRSTSKSIQEAANLMRG 870
G F TD+ R S+ + ++ G
Sbjct: 544 RIGRFDRATDVWERMGKRGFYPSVSTYSVMIHG 576
>ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524756|gb|AET05210.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 520
Score = 405 bits (1042), Expect = e-110
Identities = 195/293 (66%), Positives = 238/293 (81%)
Frame = +1
Query: 4 KTYSIMIRGWGDIGDSGEAQKLFDEMLERGYNVDLLAWNSVLHALCKGGKVDEAYELFKG 183
KTYSI+I GWG IGDSG+A++LFD MLE+G +VDLLA+N++L ALCKGG VDEA +
Sbjct: 214 KTYSILINGWGKIGDSGKARELFDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFLND 273
Query: 184 MRAKGLEPDAYSYSIFIHASCEANDLHSAFRVLDSMKRYNLVPNVFTYNCIIKKLCKNDK 363
M +K +EPDA++YSIFI + C+AN++HSAF VLD M+R NL+PNVFTYNCIIK+LCK K
Sbjct: 274 MLSKKVEPDAFTYSIFIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIKK 333
Query: 364 IDEAYELLDEMIEKGAIPDTWSYNTILAFHCDHNEVNRAFKLISRMGQDKCERDTHTYNM 543
++EAY+LLDEMI G PDTWSYN I A+HCDH EVNRA KLISRM +D C D HTYNM
Sbjct: 334 VEEAYQLLDEMISSGLKPDTWSYNAIQAYHCDHCEVNRALKLISRMEKDVCFPDRHTYNM 393
Query: 544 VLKMLIRIGRFDRVEKVWYSMEERGFHPTVSTYAVMIHGLCKKRGKLEEAYKYFEMMIDE 723
VLK+LIRIGRFD+ +VW M ++ F+P+VSTY+VMIHGLCKK+GKLEEA KYF MMIDE
Sbjct: 394 VLKLLIRIGRFDKATEVWECMGDKKFYPSVSTYSVMIHGLCKKKGKLEEACKYFAMMIDE 453
Query: 724 GIPPYSSTCELLRNKLIGWGFAEKTDILADKMDRSTSKSIQEAANLMRGNREA 882
GIPPY +T E+LRN+L+G G + +ILA KM +STS SIQE AN+M G R A
Sbjct: 454 GIPPYDTTIEMLRNRLLGLGLLDNIEILAAKMRQSTSCSIQELANIMIGARSA 506