BLASTX nr result
ID: Rehmannia25_contig00012825
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00012825
(556 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002515332.1| conserved hypothetical protein [Ricinus comm... 47 3e-09
gb|AAS55774.2| putative polyprotein [Oryza sativa Japonica Group] 45 5e-08
ref|XP_002337260.1| predicted protein [Populus trichocarpa] 44 1e-07
gb|AAU43957.1| putative polyprotein [Oryza sativa Japonica Group] 44 2e-07
gb|AAM74239.1|AC074355_1 Putative retroelement [Oryza sativa Jap... 43 5e-07
gb|AAM01024.1|AC090488_24 Putative retroelement [Oryza sativa Ja... 43 5e-07
ref|XP_002330315.1| predicted protein [Populus trichocarpa] 42 7e-07
gb|ABA94476.1| retrotransposon protein, putative, unclassified [... 42 9e-07
gb|EAZ01809.1| hypothetical protein OsI_23834 [Oryza sativa Indi... 40 9e-07
gb|AAN59764.1| Putative retroelement [Oryza sativa Japonica Grou... 43 1e-06
gb|ABA93839.1| retrotransposon protein, putative, unclassified [... 39 2e-06
gb|ADX31265.1| unknown [Triticum aestivum] 40 3e-06
emb|CAE03440.1| OSJNBa0032F06.23 [Oryza sativa Japonica Group] 39 3e-06
gb|ABA99961.1| retrotransposon protein, putative, unclassified [... 40 4e-06
gb|ABA97314.2| retrotransposon protein, putative, unclassified [... 41 4e-06
ref|XP_002337435.1| predicted protein [Populus trichocarpa] 40 4e-06
gb|ABA98724.1| retrotransposon protein, putative, unclassified [... 38 5e-06
emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group] g... 42 9e-06
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group] 40 9e-06
gb|AAT78770.1| putative retrotransposon gag protein [Oryza sativ... 41 9e-06
>ref|XP_002515332.1| conserved hypothetical protein [Ricinus communis]
gi|223545812|gb|EEF47316.1| conserved hypothetical
protein [Ricinus communis]
Length = 171
Score = 47.0 bits (110), Expect(2) = 3e-09
Identities = 18/43 (41%), Positives = 31/43 (72%)
Frame = +1
Query: 427 WQQFLEVISARFEELKESRIIAEFNKLKQTGSYEDYVDKFEEL 555
W F+ +++RF++ ++ EFNKL+QT S EDY+D+FE++
Sbjct: 94 WNDFVIDVNSRFKDESGINVVEEFNKLQQTNSLEDYIDEFEKV 136
Score = 40.0 bits (92), Expect(2) = 3e-09
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +2
Query: 281 LRNRLANEQQGVQMISPLPKLDFPRFDGNHPRSWILKCNGYF 406
+R+ +E+ + +PKL FP+FDG++ R WI KC YF
Sbjct: 15 VRSPRFDERSNQPRLGYIPKLKFPKFDGSNLRQWIKKCCKYF 56
>gb|AAS55774.2| putative polyprotein [Oryza sativa Japonica Group]
Length = 2108
Score = 45.1 bits (105), Expect(2) = 5e-08
Identities = 23/55 (41%), Positives = 32/55 (58%)
Frame = +2
Query: 242 SVGDGSQPRTQQTLRNRLANEQQGVQMISPLPKLDFPRFDGNHPRSWILKCNGYF 406
SV G + + NR + +QG LPKLDFP+FDG+ P+SW ++C YF
Sbjct: 853 SVPHGVEFGANSSRGNRDLHGEQGFN--HRLPKLDFPQFDGSDPQSWRMRCEHYF 905
Score = 37.7 bits (86), Expect(2) = 5e-08
Identities = 12/43 (27%), Positives = 30/43 (69%)
Frame = +1
Query: 427 WQQFLEVISARFEELKESRIIAEFNKLKQTGSYEDYVDKFEEL 555
W +F E ++ +F+ + ++I + +++KQTGS ++ ++F++L
Sbjct: 943 WGRFYEAMNRKFDRNQHRQLIRQLDQIKQTGSVSEFYERFDDL 985
>ref|XP_002337260.1| predicted protein [Populus trichocarpa]
Length = 339
Score = 43.5 bits (101), Expect(2) = 1e-07
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +1
Query: 427 WQQFLEVISARFEELKESRIIAEFNKLKQTGSYEDYVDKFEEL 555
W++F + I +RF + I+ EFNKL Q G E+YV++FEEL
Sbjct: 166 WEEFSKAICSRFGSRDD--IVEEFNKLTQEGGMEEYVERFEEL 206
Score = 37.7 bits (86), Expect(2) = 1e-07
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 302 EQQGVQMISPLPKLDFPRFDGNHPRSWILKCNGYFKL 412
E Q + P++D F G++PR W+ +CN +FKL
Sbjct: 93 EPQRAMFNTGFPRMDLTTFRGDNPRGWLRRCNKFFKL 129
>gb|AAU43957.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1263
Score = 44.3 bits (103), Expect(2) = 2e-07
Identities = 23/55 (41%), Positives = 31/55 (56%)
Frame = +2
Query: 242 SVGDGSQPRTQQTLRNRLANEQQGVQMISPLPKLDFPRFDGNHPRSWILKCNGYF 406
SV G + + NR + +QG LPKLDFP+FDG+ P+ W L+C YF
Sbjct: 153 SVPHGIEFGANSSRGNRDLHGEQGFN--HRLPKLDFPQFDGSDPQGWRLRCEHYF 205
Score = 36.6 bits (83), Expect(2) = 2e-07
Identities = 12/43 (27%), Positives = 29/43 (67%)
Frame = +1
Query: 427 WQQFLEVISARFEELKESRIIAEFNKLKQTGSYEDYVDKFEEL 555
W +F E ++ +F+ + ++I + +++KQTGS ++ + F++L
Sbjct: 243 WGRFCEAVNRKFDRNQHRQLIRQLDQIKQTGSVSEFYEWFDDL 285
>gb|AAM74239.1|AC074355_1 Putative retroelement [Oryza sativa Japonica Group]
Length = 1065
Score = 42.7 bits (99), Expect(2) = 5e-07
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +2
Query: 302 EQQGVQMISPLPKLDFPRFDGNHPRSWILKCNGYF 406
+Q G Q +PKLDFP+FDG P W ++C YF
Sbjct: 160 DQFGRQYNHRVPKLDFPKFDGTDPEDWKMRCEHYF 194
Score = 36.6 bits (83), Expect(2) = 5e-07
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = +1
Query: 427 WQQFLEVISARFEELKESRIIAEFNKLKQTGSYEDYVDKFEEL 555
W+ F +S +F+ + +I + + +KQTG+ +Y ++F+EL
Sbjct: 232 WENFCIAVSHKFDRDQHETLIRQMDSIKQTGTVWEYYERFDEL 274
>gb|AAM01024.1|AC090488_24 Putative retroelement [Oryza sativa Japonica Group]
Length = 954
Score = 42.7 bits (99), Expect(2) = 5e-07
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +2
Query: 302 EQQGVQMISPLPKLDFPRFDGNHPRSWILKCNGYF 406
+Q G Q +PKLDFP+FDG P W ++C YF
Sbjct: 96 DQFGRQYNHRVPKLDFPKFDGTDPEDWKMRCEHYF 130
Score = 36.6 bits (83), Expect(2) = 5e-07
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = +1
Query: 427 WQQFLEVISARFEELKESRIIAEFNKLKQTGSYEDYVDKFEEL 555
W+ F +S +F+ + +I + + +KQTG+ +Y ++F+EL
Sbjct: 168 WENFCIAVSHKFDRDQHETLIRQMDSIKQTGTVWEYYERFDEL 210
>ref|XP_002330315.1| predicted protein [Populus trichocarpa]
Length = 528
Score = 42.0 bits (97), Expect(2) = 7e-07
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
Frame = +2
Query: 284 RNRLANEQQGVQMIS------PLPKLDFPRFDGNHPRSWILKCNGYFKL 412
RN+ EQ Q + PLP+++ P F G +PR W+ KC YFK+
Sbjct: 104 RNQFRGEQMMGQELHRMGYNIPLPRVELPTFRGENPRGWLRKCRKYFKM 152
Score = 37.0 bits (84), Expect(2) = 7e-07
Identities = 17/42 (40%), Positives = 28/42 (66%)
Frame = +1
Query: 430 QQFLEVISARFEELKESRIIAEFNKLKQTGSYEDYVDKFEEL 555
++F +++ RF ++S + EFNKL Q S +DY+ +FEEL
Sbjct: 190 EEFAQILCRRFGSREDS--VEEFNKLIQDKSVDDYIKRFEEL 229
>gb|ABA94476.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 940
Score = 42.4 bits (98), Expect(2) = 9e-07
Identities = 15/44 (34%), Positives = 29/44 (65%)
Frame = +1
Query: 424 TWQQFLEVISARFEELKESRIIAEFNKLKQTGSYEDYVDKFEEL 555
+W++F++ + A+F + ++ +FNKL+QTGS Y +F +L
Sbjct: 193 SWEEFVDAVCAKFGREEFQGVVRQFNKLRQTGSVTSYAKRFNDL 236
Score = 36.2 bits (82), Expect(2) = 9e-07
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +2
Query: 338 KLDFPRFDGNHPRSWILKCNGYFKL 412
++D P+FDG +P++W +KC YF++
Sbjct: 134 RVDCPQFDGGNPKAWKMKCKTYFRV 158
>gb|EAZ01809.1| hypothetical protein OsI_23834 [Oryza sativa Indica Group]
gi|125597977|gb|EAZ37757.1| hypothetical protein
OsJ_22094 [Oryza sativa Japonica Group]
Length = 310
Score = 40.4 bits (93), Expect(2) = 9e-07
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +1
Query: 424 TWQQFLEVISARFEELKESRIIAEFNKLKQTGSYEDYVDKFEEL 555
TW +F ++ RF + I F LKQ S E Y+DKFEE+
Sbjct: 175 TWPEFCTMVCKRFAAKSKVEITDTFRNLKQYSSVETYIDKFEEI 218
Score = 38.1 bits (87), Expect(2) = 9e-07
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 338 KLDFPRFDGNHPRSWILKCNGYFKL 412
K +FP F+G HP +WI K N YF L
Sbjct: 116 KFNFPEFNGEHPEAWIRKANKYFSL 140
>gb|AAN59764.1| Putative retroelement [Oryza sativa Japonica Group]
gi|108706657|gb|ABF94452.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1021
Score = 42.7 bits (99), Expect(2) = 1e-06
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +2
Query: 302 EQQGVQMISPLPKLDFPRFDGNHPRSWILKCNGYF 406
+Q G Q +PKLDFP+FDG P W ++C YF
Sbjct: 220 DQFGRQYNHRVPKLDFPKFDGTDPEDWRMRCEHYF 254
Score = 35.4 bits (80), Expect(2) = 1e-06
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +1
Query: 427 WQQFLEVISARFEELKESRIIAEFNKLKQTGSYEDYVDKFEEL 555
W+ F +S +F+ + +I + + +KQ GS +Y +KF+EL
Sbjct: 292 WENFCVAMSNKFDRDQHEVLIRQMDSIKQIGSVWEYYEKFDEL 334
>gb|ABA93839.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 852
Score = 38.9 bits (89), Expect(2) = 2e-06
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = +1
Query: 382 DPQMQWLF*TNP*HTWQQFLEVISARFEELKESRIIAEFNKLKQTGSYEDYVDKFEEL 555
DPQ W+ W F E ++ +F+ + +I + + +KQTGS ++ ++F++L
Sbjct: 135 DPQNWWM------SYWVVFSEAVNQKFDHNQHQHLIRQIDHIKQTGSVSEFYERFDDL 186
Score = 38.5 bits (88), Expect(2) = 2e-06
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Frame = +2
Query: 176 HLVSQSHRFLAMADGTRLKDPGSVGDGSQPRTQQTLRNRL------ANEQQGVQ----MI 325
H V+ +R A T L P + G P+T R+ L E+ G Q +
Sbjct: 64 HRVAHLNRGRAPGAVTTLVPPPTKGT---PQTPSNFRSSLDFFAHSGREEWGNQNEQGLN 120
Query: 326 SPLPKLDFPRFDGNHPRSW 382
S LPKLDFP+FDG+ P++W
Sbjct: 121 SRLPKLDFPQFDGSDPQNW 139
>gb|ADX31265.1| unknown [Triticum aestivum]
Length = 1231
Score = 40.4 bits (93), Expect(2) = 3e-06
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +2
Query: 332 LPKLDFPRFDGNHPRSWILKCNGYF 406
LPK+DFP FDG +P+ W KC YF
Sbjct: 156 LPKMDFPSFDGENPQFWKTKCEKYF 180
Score = 36.2 bits (82), Expect(2) = 3e-06
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 424 TWQQFLEVISARFEELKESRIIAEFNKLKQTGSYEDYVDKFEEL 555
TW E + +F + + +FN L+Q+G+ DY+ +FEEL
Sbjct: 217 TWASLCEALCHKFGREQYQSHLRQFNTLRQSGTVADYMTRFEEL 260
>emb|CAE03440.1| OSJNBa0032F06.23 [Oryza sativa Japonica Group]
Length = 517
Score = 38.9 bits (89), Expect(2) = 3e-06
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +1
Query: 433 QFLEVISARFEELKESRIIAEFNKLKQTGSYEDYVDKFEEL 555
+F ++ RF + II F LKQ GS E Y+DKFEE+
Sbjct: 158 KFCTIVCKRFAAKSKVEIIDIFRNLKQYGSVESYIDKFEEI 198
Score = 37.7 bits (86), Expect(2) = 3e-06
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 338 KLDFPRFDGNHPRSWILKCNGYFKL 412
K +FP F+G HP +WI K N YF L
Sbjct: 116 KFNFPEFNGEHPEAWIRKANKYFAL 140
>gb|ABA99961.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1619
Score = 39.7 bits (91), Expect(2) = 4e-06
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +2
Query: 332 LPKLDFPRFDGNHPRSWILKCNGYF 406
+PKLDFP+FDG+ + W +KC YF
Sbjct: 166 VPKLDFPKFDGSDSQEWRMKCEHYF 190
Score = 36.6 bits (83), Expect(2) = 4e-06
Identities = 12/43 (27%), Positives = 27/43 (62%)
Frame = +1
Query: 427 WQQFLEVISARFEELKESRIIAEFNKLKQTGSYEDYVDKFEEL 555
W+ F +SA+F+ + +I + + +KQ G+ ++ ++F+EL
Sbjct: 228 WEDFCAAVSAKFDRDQHENLIRQMDSIKQNGTVWEFYERFDEL 270
>gb|ABA97314.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1219
Score = 40.8 bits (94), Expect(2) = 4e-06
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +2
Query: 302 EQQGVQMISPLPKLDFPRFDGNHPRSWILKCNGYF 406
+Q G Q +PKLDFP+FDG P W ++C +F
Sbjct: 140 DQFGRQYNHRVPKLDFPKFDGTDPEDWKMRCEHHF 174
Score = 35.4 bits (80), Expect(2) = 4e-06
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = +1
Query: 427 WQQFLEVISARFEELKESRIIAEFNKLKQTGSYEDYVDKFEEL 555
W+ F +S +F+ + +I + + +KQTG +Y ++F+EL
Sbjct: 212 WENFCIAVSHKFDRDQHETLIRQMDSIKQTGIVWEYYERFDEL 254
>ref|XP_002337435.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 40.0 bits (92), Expect(2) = 4e-06
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +1
Query: 427 WQQFLEVISARFEELKESRIIAEFNKLKQTGSYEDYVDKFEEL 555
W++F I RF + I+ EFNKL Q G ++YV++FEEL
Sbjct: 115 WEKFSGAICNRFGN--RTAIVEEFNKLMQEGDVDEYVERFEEL 155
Score = 36.2 bits (82), Expect(2) = 4e-06
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 302 EQQGVQMISPLPKLDFPRFDGNHPRSWILKCNGYFKL 412
EQQ + LP++D F G++PR W+ +C +FKL
Sbjct: 42 EQQRMVHNVVLPRMDLTTFWGDNPRGWLRRCKKFFKL 78
>gb|ABA98724.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1269
Score = 38.1 bits (87), Expect(2) = 5e-06
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 427 WQQFLEVISARFEELKESRIIAEFNKLKQTGSYEDYVDKFEEL 555
W F E + A+F + +I +F +L+Q G+ YV+KF EL
Sbjct: 185 WNDFSEAVCAKFGREEFQSLIRQFKRLRQEGTILSYVEKFNEL 227
Score = 37.7 bits (86), Expect(2) = 5e-06
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +2
Query: 332 LPKLDFPRFDGNHPRSWILKCNGYFKL 412
LP D P+F+G +PR+W +KC YF++
Sbjct: 123 LPAKDCPQFEGENPRAWKMKCETYFRV 149
>emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group]
gi|38347666|emb|CAE05600.2| OSJNBa0054D14.1 [Oryza
sativa Japonica Group]
Length = 1629
Score = 42.4 bits (98), Expect(2) = 9e-06
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +2
Query: 332 LPKLDFPRFDGNHPRSWILKCNGYF 406
+PKLDFP+FDG P+ W +KC YF
Sbjct: 176 VPKLDFPKFDGTDPQDWRMKCEHYF 200
Score = 32.7 bits (73), Expect(2) = 9e-06
Identities = 11/43 (25%), Positives = 27/43 (62%)
Frame = +1
Query: 427 WQQFLEVISARFEELKESRIIAEFNKLKQTGSYEDYVDKFEEL 555
W+ F +S +F+ + +I + + ++Q+G+ +Y ++F+EL
Sbjct: 238 WEDFCAALSDKFDRDQHELLIRQMDGIRQSGTVWEYYEQFDEL 280
>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
Length = 1311
Score = 39.7 bits (91), Expect(2) = 9e-06
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 424 TWQQFLEVISARFEELKESRIIAEFNKLKQTGSYEDYVDKFEE 552
+W +F ++ RF + I F LKQ GS + Y+DKFEE
Sbjct: 348 SWPEFKTMVCQRFAAKSKIEITETFRNLKQYGSVDSYIDKFEE 390
Score = 35.4 bits (80), Expect(2) = 9e-06
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 341 LDFPRFDGNHPRSWILKCNGYFKL 412
+DFP F+G++P SWI K YF L
Sbjct: 290 VDFPTFEGDYPESWIRKAEKYFSL 313
>gb|AAT78770.1| putative retrotransposon gag protein [Oryza sativa Japonica Group]
gi|108709720|gb|ABF97515.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 748
Score = 41.2 bits (95), Expect(2) = 9e-06
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +2
Query: 332 LPKLDFPRFDGNHPRSWILKCNGYF 406
+PKLDFP FDG+ P+ W +KC YF
Sbjct: 206 MPKLDFPIFDGSDPQDWRMKCEHYF 230
Score = 33.9 bits (76), Expect(2) = 9e-06
Identities = 11/43 (25%), Positives = 26/43 (60%)
Frame = +1
Query: 427 WQQFLEVISARFEELKESRIIAEFNKLKQTGSYEDYVDKFEEL 555
W +F ++ +F+ ++ + + +KQ G+ ++Y +KF+EL
Sbjct: 268 WAEFCGAVACKFDINLHDWVLGQLDTIKQLGTVQEYYEKFDEL 310