BLASTX nr result

ID: Rehmannia25_contig00012498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00012498
         (397 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006850268.1| hypothetical protein AMTR_s00020p00100020 [A...   121   6e-29
ref|XP_003588310.1| hypothetical protein MTR_1g005810 [Medicago ...   112   2e-23
emb|CBI40707.3| unnamed protein product [Vitis vinifera]              109   4e-22
ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ...   107   2e-21
emb|CBI31112.3| unnamed protein product [Vitis vinifera]               79   6e-13
emb|CAN65166.1| hypothetical protein VITISV_029400 [Vitis vinifera]    68   1e-09

>ref|XP_006850268.1| hypothetical protein AMTR_s00020p00100020 [Amborella trichopoda]
           gi|548853889|gb|ERN11849.1| hypothetical protein
           AMTR_s00020p00100020 [Amborella trichopoda]
          Length = 85

 Score =  121 bits (304), Expect(2) = 6e-29
 Identities = 57/67 (85%), Positives = 58/67 (86%)
 Frame = +3

Query: 30  PVFWFPLGLPCSQVDPMAARKGDLVLYSGDLFPTEARKLPSCPRSHSVNRKGKPTHLSAP 209
           PVFWFPLGLPCSQVDP A RKGDLVLYS DL PTEA KLPSCP+SHSVNRKGKPTH SAP
Sbjct: 5   PVFWFPLGLPCSQVDPNAVRKGDLVLYSDDLLPTEACKLPSCPKSHSVNRKGKPTHPSAP 64

Query: 210 LVDRCGF 230
           LVD   F
Sbjct: 65  LVDAVWF 71



 Score = 31.6 bits (70), Expect(2) = 6e-29
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = +2

Query: 227 FYEASKHSSLTLINQ 271
           FYEASKHSSL LINQ
Sbjct: 71  FYEASKHSSLALINQ 85


>ref|XP_003588310.1| hypothetical protein MTR_1g005810 [Medicago truncatula]
           gi|355477358|gb|AES58561.1| hypothetical protein
           MTR_1g005810 [Medicago truncatula]
          Length = 146

 Score =  112 bits (279), Expect(2) = 2e-23
 Identities = 53/58 (91%), Positives = 54/58 (93%)
 Frame = +3

Query: 87  RKGDLVLYSGDLFPTEARKLPSCPRSHSVNRKGKPTHLSAPLVDRCGFTKRLSTVHSR 260
           +KGDLVLYSG  FPTEARK PSCPRSHSVNRKGKPTH SAPLVDRCGFTKRLSTVHSR
Sbjct: 89  KKGDLVLYSGIFFPTEARKPPSCPRSHSVNRKGKPTHPSAPLVDRCGFTKRLSTVHSR 146



 Score = 22.7 bits (47), Expect(2) = 2e-23
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +1

Query: 70  STPWQQEK 93
           STPWQQEK
Sbjct: 82  STPWQQEK 89


>emb|CBI40707.3| unnamed protein product [Vitis vinifera]
          Length = 574

 Score =  109 bits (272), Expect = 4e-22
 Identities = 52/58 (89%), Positives = 52/58 (89%)
 Frame = -1

Query: 193 VGFPFRFTECDLGHDGSLRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQKTGVPH 20
           VGF FRF ECDLGHDGSLRASVGKRS EYSTRSPFLA MGSTCEQGKPNGNQKTG  H
Sbjct: 515 VGFLFRFIECDLGHDGSLRASVGKRSSEYSTRSPFLATMGSTCEQGKPNGNQKTGGYH 572


>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
            gi|355477385|gb|AES58588.1| Ribosomal protein S10
            [Medicago truncatula]
          Length = 1152

 Score =  107 bits (267), Expect = 2e-21
 Identities = 67/121 (55%), Positives = 73/121 (60%), Gaps = 1/121 (0%)
 Frame = -1

Query: 394  DAPTPPCLALYLKKKEEV*SVGKNARSV*YNR*P*GVAANLLIDQRE*TVLRRFVKPHRS 215
            +APTPPCLALYL  +                    G AA   I +   T     +K  R 
Sbjct: 916  NAPTPPCLALYLTLRIR------------------GYAAWERIKEVSDTTGN--LKEWRQ 955

Query: 214  TRGADR*VGFPFRFTECDLGHDGSLRASVGKRSPEYSTRSP-FLAAMGSTCEQGKPNGNQ 38
            +        FPFRFTECDLGHDG LRASVGKRSPEYSTRSP FLAAMGSTC+QGKPNGNQ
Sbjct: 956  S--------FPFRFTECDLGHDGGLRASVGKRSPEYSTRSPFFLAAMGSTCKQGKPNGNQ 1007

Query: 37   K 35
            K
Sbjct: 1008 K 1008


>emb|CBI31112.3| unnamed protein product [Vitis vinifera]
          Length = 2099

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 37/38 (97%), Positives = 37/38 (97%)
 Frame = -1

Query: 142  LRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQKTG 29
            LRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQK G
Sbjct: 1775 LRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQKMG 1812


>emb|CAN65166.1| hypothetical protein VITISV_029400 [Vitis vinifera]
          Length = 267

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 34/50 (68%), Positives = 35/50 (70%)
 Frame = +2

Query: 146 PIVSQITFRESKGEAYXXXXXXXXXXXFYEASKHSSLTLINQEVCRHSLR 295
           P  +QITFRESKGEAY           FYEASKHSSL LINQE CRHSLR
Sbjct: 140 PSCTQITFRESKGEAYSSISSSRRSVRFYEASKHSSLALINQEFCRHSLR 189



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 35/60 (58%), Positives = 39/60 (65%), Gaps = 11/60 (18%)
 Frame = +3

Query: 42  FPLGLPCSQ-----------VDPMAARKGDLVLYSGDLFPTEARKLPSCPRSHSVNRKGK 188
           +P+GL  S            VDPMAARKGDLVLYSGDLFPTEARKLPSC +      KG+
Sbjct: 94  YPIGLEASYLSPISRPFNFLVDPMAARKGDLVLYSGDLFPTEARKLPSCTQITFRESKGE 153


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