BLASTX nr result
ID: Rehmannia25_contig00012433
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00012433
(979 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001275393.1| single-stranded DNA-bindig protein WHY2, mit... 292 1e-76
ref|XP_004250750.1| PREDICTED: single-stranded DNA-bindig protei... 290 6e-76
ref|XP_004250749.1| PREDICTED: single-stranded DNA-bindig protei... 289 1e-75
ref|XP_006352086.1| PREDICTED: Why2 protein [Solanum tuberosum] 286 8e-75
pdb|3N1H|A Chain A, Crystal Structure Of Stwhy2 gi|302566180|pdb... 273 1e-70
pdb|3R9Y|A Chain A, Crystal Structure Of Stwhy2 K67a (Form I) gi... 270 5e-70
ref|XP_002303313.2| hypothetical protein POPTR_0003s04700g [Popu... 270 5e-70
ref|XP_006478304.1| PREDICTED: single-stranded DNA-bindig protei... 268 2e-69
ref|XP_006302759.1| hypothetical protein CARUB_v10020880mg [Caps... 267 4e-69
ref|XP_006302758.1| hypothetical protein CARUB_v10020880mg [Caps... 267 4e-69
ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata] gi... 266 1e-68
gb|AAG51881.1|AC016162_2 unknown protein; 79476-81015 [Arabidops... 265 2e-68
ref|NP_177282.2| single-stranded DNA-binding protein WHY2 [Arabi... 265 2e-68
pdb|4KOP|A Chain A, Crystal Structure Of Why2 From Arabidopsis T... 264 3e-68
ref|XP_006390788.1| hypothetical protein EUTSA_v10019058mg [Eutr... 261 3e-67
gb|ADL36848.1| WHY domain class transcription factor [Malus dome... 261 4e-67
ref|XP_006390787.1| hypothetical protein EUTSA_v10019058mg [Eutr... 259 8e-67
gb|EMJ01725.1| hypothetical protein PRUPE_ppa011529mg [Prunus pe... 254 5e-65
gb|AFK37234.1| unknown [Lotus japonicus] 254 5e-65
gb|EOY16918.1| Whirly 2, putative isoform 1 [Theobroma cacao] 253 1e-64
>ref|NP_001275393.1| single-stranded DNA-bindig protein WHY2, mitochondrial [Solanum
tuberosum] gi|426021772|sp|D9J034.1|WHY2_SOLTU RecName:
Full=Single-stranded DNA-bindig protein WHY2,
mitochondrial; AltName: Full=Protein WHIRLY 2;
Short=StWHY2; Flags: Precursor
gi|298359665|gb|ADI77438.1| Why2 protein [Solanum
tuberosum]
Length = 238
Score = 292 bits (748), Expect = 1e-76
Identities = 155/242 (64%), Positives = 182/242 (75%), Gaps = 1/242 (0%)
Frame = +1
Query: 16 MFKLSKLLLQSSRDPLPLRSLVGAATNDFKLLRCITTQTGTSTAMPKFGSD-GKPTARTF 192
M K+S+LL R+ L + L G I T G ST +D GK R F
Sbjct: 1 MLKVSRLL--HPRNQLLHKKLPGECVKGSIWQHAINTFAGFSTVRQNVVADAGKREGRVF 58
Query: 193 APYSIYKGKAALSADPLLPMFSQLESGDYRVERRGVIMLTFWPAIGERKYDWDKRQKFAL 372
APYS++KGKAALSA+P LP F++L+SG ++ RRGVIMLTFWP++GERKYDW+KRQ FAL
Sbjct: 59 APYSVFKGKAALSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGERKYDWEKRQLFAL 118
Query: 373 SATEVGSLISLGSKDSCEFFHDPSMLSSNAGQVRKSLSIKAHADGSGYFVSLSVVNNILK 552
SATEVGSLIS+G++DS EFFHDPSMLSSNAGQVRKSLSIK +ADGSGYF+SLSVVNN LK
Sbjct: 119 SATEVGSLISMGTRDSSEFFHDPSMLSSNAGQVRKSLSIKPNADGSGYFISLSVVNNNLK 178
Query: 553 TNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQQPHYASKSSLGAVPVPELQTSEW 732
TNDRF VPVTTAEFAVMR AF+FALPHIMGWDR TN+ S+S + VP+L +EW
Sbjct: 179 TNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDRFTNRPSESISQSP--SKVVPQLMEAEW 236
Query: 733 DR 738
DR
Sbjct: 237 DR 238
>ref|XP_004250750.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
mitochondrial-like isoform 2 [Solanum lycopersicum]
Length = 235
Score = 290 bits (742), Expect = 6e-76
Identities = 146/207 (70%), Positives = 168/207 (81%)
Frame = +1
Query: 118 ITTQTGTSTAMPKFGSDGKPTARTFAPYSIYKGKAALSADPLLPMFSQLESGDYRVERRG 297
I T ST +DGK R FAPYS++KGKAALSA+P LP F++L+SG ++ RRG
Sbjct: 31 INTFAAFSTVRQDVVADGKREGRVFAPYSVFKGKAALSAEPRLPTFNRLDSGGVKLNRRG 90
Query: 298 VIMLTFWPAIGERKYDWDKRQKFALSATEVGSLISLGSKDSCEFFHDPSMLSSNAGQVRK 477
VIMLTFWP++GERKYDW+KRQ FALSATEVGSLIS+G++DS EFFHDPSMLSSNAGQVRK
Sbjct: 91 VIMLTFWPSVGERKYDWEKRQLFALSATEVGSLISMGTRDSSEFFHDPSMLSSNAGQVRK 150
Query: 478 SLSIKAHADGSGYFVSLSVVNNILKTNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCT 657
SLSIK +ADGSGYFVSLSVVNN LKTNDRF VPVTTAEFAVMR AF+FALPHIMGWDR T
Sbjct: 151 SLSIKPNADGSGYFVSLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDRFT 210
Query: 658 NQQPHYASKSSLGAVPVPELQTSEWDR 738
N+ S+S + VP+L +EWDR
Sbjct: 211 NRPSESISQSP--SKVVPQLMEAEWDR 235
>ref|XP_004250749.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
mitochondrial-like isoform 1 [Solanum lycopersicum]
Length = 238
Score = 289 bits (740), Expect = 1e-75
Identities = 155/242 (64%), Positives = 181/242 (74%), Gaps = 1/242 (0%)
Frame = +1
Query: 16 MFKLSKLLLQSSRDPLPLRSLVGAATNDFKLLRCITTQTGTSTAMPKFGSD-GKPTARTF 192
M K+S+LL R+ L + L G I T ST +D GK R F
Sbjct: 1 MLKVSRLL--HPRNQLLHKKLSGEDVKGSIWQNAINTFAAFSTVRQDVVADAGKREGRVF 58
Query: 193 APYSIYKGKAALSADPLLPMFSQLESGDYRVERRGVIMLTFWPAIGERKYDWDKRQKFAL 372
APYS++KGKAALSA+P LP F++L+SG ++ RRGVIMLTFWP++GERKYDW+KRQ FAL
Sbjct: 59 APYSVFKGKAALSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGERKYDWEKRQLFAL 118
Query: 373 SATEVGSLISLGSKDSCEFFHDPSMLSSNAGQVRKSLSIKAHADGSGYFVSLSVVNNILK 552
SATEVGSLIS+G++DS EFFHDPSMLSSNAGQVRKSLSIK +ADGSGYFVSLSVVNN LK
Sbjct: 119 SATEVGSLISMGTRDSSEFFHDPSMLSSNAGQVRKSLSIKPNADGSGYFVSLSVVNNNLK 178
Query: 553 TNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQQPHYASKSSLGAVPVPELQTSEW 732
TNDRF VPVTTAEFAVMR AF+FALPHIMGWDR TN+ S+S + VP+L +EW
Sbjct: 179 TNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDRFTNRPSESISQSP--SKVVPQLMEAEW 236
Query: 733 DR 738
DR
Sbjct: 237 DR 238
>ref|XP_006352086.1| PREDICTED: Why2 protein [Solanum tuberosum]
Length = 238
Score = 286 bits (732), Expect = 8e-75
Identities = 152/242 (62%), Positives = 179/242 (73%), Gaps = 1/242 (0%)
Frame = +1
Query: 16 MFKLSKLLLQSSRDPLPLRSLVGAATNDFKLLRCITTQTGTSTAMPKFGSD-GKPTARTF 192
M K+S+LL R+ L + L G I T G ST +D GK R F
Sbjct: 1 MLKVSRLL--HPRNQLLHKKLPGECVKGSIWQHAINTFAGFSTVRQNVVADAGKREGRVF 58
Query: 193 APYSIYKGKAALSADPLLPMFSQLESGDYRVERRGVIMLTFWPAIGERKYDWDKRQKFAL 372
APYS++KGKAALSA+P LP F++L+SG ++ RRGVIMLTFWP++GERKYDW+KRQ L
Sbjct: 59 APYSVFKGKAALSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGERKYDWEKRQVMCL 118
Query: 373 SATEVGSLISLGSKDSCEFFHDPSMLSSNAGQVRKSLSIKAHADGSGYFVSLSVVNNILK 552
ATEVGSLIS+G++DS EFFHDPSMLSSNAGQVRKSLSIK +ADGSGYF+SLSVVNN LK
Sbjct: 119 YATEVGSLISMGTRDSSEFFHDPSMLSSNAGQVRKSLSIKPNADGSGYFISLSVVNNNLK 178
Query: 553 TNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQQPHYASKSSLGAVPVPELQTSEW 732
TNDRF VPVTTAEFAVMR AF+FALPHIMGWDR TN+ S+S + VP+L +EW
Sbjct: 179 TNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDRFTNRPSESISQSP--SKVVPQLMEAEW 236
Query: 733 DR 738
DR
Sbjct: 237 DR 238
>pdb|3N1H|A Chain A, Crystal Structure Of Stwhy2 gi|302566180|pdb|3N1I|A Chain
A, Crystal Structure Of A Stwhy2-Ere32 Complex
gi|302566182|pdb|3N1J|A Chain A, Crystal Structure Of A
Stwhy2-Dt32 Complex gi|302566184|pdb|3N1K|A Chain A,
Crystal Structure Of A Stwhy2-Cere32 Complex
gi|302566186|pdb|3N1L|A Chain A, Crystal Structure Of A
Stwhy2-Rcere32 Complex
Length = 178
Score = 273 bits (697), Expect = 1e-70
Identities = 131/165 (79%), Positives = 149/165 (90%)
Frame = +1
Query: 169 GKPTARTFAPYSIYKGKAALSADPLLPMFSQLESGDYRVERRGVIMLTFWPAIGERKYDW 348
GK R FAPYS++KGKAALSA+P LP F++L+SG ++ RRGVIMLTFWP++GERKYDW
Sbjct: 5 GKREGRVFAPYSVFKGKAALSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGERKYDW 64
Query: 349 DKRQKFALSATEVGSLISLGSKDSCEFFHDPSMLSSNAGQVRKSLSIKAHADGSGYFVSL 528
+KRQ FALSATEVGSLIS+G++DS EFFHDPSMLSSNAGQVRKSLSIK +ADGSGYF+SL
Sbjct: 65 EKRQLFALSATEVGSLISMGTRDSSEFFHDPSMLSSNAGQVRKSLSIKPNADGSGYFISL 124
Query: 529 SVVNNILKTNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQ 663
SVVNN LKTNDRF VPVTTAEFAVMR AF+FALPHIMGWDR TN+
Sbjct: 125 SVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDRFTNR 169
>pdb|3R9Y|A Chain A, Crystal Structure Of Stwhy2 K67a (Form I)
gi|347948613|pdb|3R9Z|A Chain A, Crystal Structure Of
Stwhy2 K67a (Form Ii) gi|347948614|pdb|3RA0|A Chain A,
Crystal Structure Of A Stwhy2 K67a-Dt32 Complex
Length = 178
Score = 270 bits (691), Expect = 5e-70
Identities = 130/165 (78%), Positives = 148/165 (89%)
Frame = +1
Query: 169 GKPTARTFAPYSIYKGKAALSADPLLPMFSQLESGDYRVERRGVIMLTFWPAIGERKYDW 348
GK R FAPYS++KG AALSA+P LP F++L+SG ++ RRGVIMLTFWP++GERKYDW
Sbjct: 5 GKREGRVFAPYSVFKGAAALSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGERKYDW 64
Query: 349 DKRQKFALSATEVGSLISLGSKDSCEFFHDPSMLSSNAGQVRKSLSIKAHADGSGYFVSL 528
+KRQ FALSATEVGSLIS+G++DS EFFHDPSMLSSNAGQVRKSLSIK +ADGSGYF+SL
Sbjct: 65 EKRQLFALSATEVGSLISMGTRDSSEFFHDPSMLSSNAGQVRKSLSIKPNADGSGYFISL 124
Query: 529 SVVNNILKTNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQ 663
SVVNN LKTNDRF VPVTTAEFAVMR AF+FALPHIMGWDR TN+
Sbjct: 125 SVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDRFTNR 169
>ref|XP_002303313.2| hypothetical protein POPTR_0003s04700g [Populus trichocarpa]
gi|118484514|gb|ABK94132.1| unknown [Populus
trichocarpa] gi|550342417|gb|EEE78292.2| hypothetical
protein POPTR_0003s04700g [Populus trichocarpa]
Length = 229
Score = 270 bits (691), Expect = 5e-70
Identities = 152/244 (62%), Positives = 175/244 (71%), Gaps = 3/244 (1%)
Frame = +1
Query: 16 MFKLSKLLLQSSRDPLPLRSLVGAATN--DFKLLRCITTQTGTSTAMPKFGSDGKPTART 189
M KLS+ L + R+ VG T+ D L +T Q ST G R
Sbjct: 1 MMKLSRFLNFN-------RNAVGKPTDVRDGSALHALTFQASIST-----GGKSSIQDRV 48
Query: 190 FAPYSIYKGKAALSADPLLPMFSQLESGDYRVERRGVIMLTFWPAIGERKYDWDKRQKFA 369
FAPYS++KGKAALS +P+LP FS+ SG+ RV+RRG +MLTF PAIGERKYD++KRQKFA
Sbjct: 49 FAPYSVFKGKAALSVEPVLPTFSKFGSGNLRVDRRGSMMLTFLPAIGERKYDYEKRQKFA 108
Query: 370 LSATEVGSLISLGSKDSCEFFHDPSMLSSNAGQVRKSLSIKAHADGSGYFVSLSVVNNIL 549
LSATEVGSLIS G KDSCEFFHDPSMLSSNAGQVRK+LSIK HADGSGYFVSLSVVNNIL
Sbjct: 109 LSATEVGSLISTGPKDSCEFFHDPSMLSSNAGQVRKNLSIKPHADGSGYFVSLSVVNNIL 168
Query: 550 KTNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQQP-HYASKSSLGAVPVPELQTS 726
KT +RF VPVTTAEF V++ A +FALPHIMGWDR T P ASK S +P+L
Sbjct: 169 KTTERFTVPVTTAEFTVLKTACSFALPHIMGWDRLTTPLPGTLASKLSKVDPQMPDL--- 225
Query: 727 EWDR 738
EWD+
Sbjct: 226 EWDK 229
>ref|XP_006478304.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
mitochondrial-like isoform X1 [Citrus sinensis]
Length = 240
Score = 268 bits (686), Expect = 2e-69
Identities = 143/243 (58%), Positives = 176/243 (72%), Gaps = 2/243 (0%)
Frame = +1
Query: 16 MFKLSKLLLQSSRDPLPLRSLVGAAT--NDFKLLRCITTQTGTSTAMPKFGSDGKPTART 189
M KLS+ LL SSR L + L G A D + +Q G ST + G R
Sbjct: 1 MMKLSRSLL-SSRSQLSEKLLAGEANYVRDGLKSHVLISQAGMSTTGHDVSAKGSLGGRI 59
Query: 190 FAPYSIYKGKAALSADPLLPMFSQLESGDYRVERRGVIMLTFWPAIGERKYDWDKRQKFA 369
FAPY +YKGKAA S DP+LP F +L+SGD +V+R+GVI+LTF PAIGERKYDW K+Q FA
Sbjct: 60 FAPYYVYKGKAAFSVDPVLPTFMKLDSGDLKVKRKGVILLTFAPAIGERKYDWAKKQHFA 119
Query: 370 LSATEVGSLISLGSKDSCEFFHDPSMLSSNAGQVRKSLSIKAHADGSGYFVSLSVVNNIL 549
LS TEVGSL+++G +DS EFFHDP+MLSSNAGQ+RKSLSIKA+AD G+F+SL+V NNIL
Sbjct: 120 LSPTEVGSLLTMGPRDSSEFFHDPAMLSSNAGQMRKSLSIKANAD--GFFISLNVANNIL 177
Query: 550 KTNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQQPHYASKSSLGAVPVPELQTSE 729
KTN+RFVVPVTTAEFAVM+ A +FALPH+MGWDR TNQ P ++ SS + + E
Sbjct: 178 KTNERFVVPVTTAEFAVMKTACSFALPHLMGWDRLTNQLPRSSTDSSSSSKVDQQFLNLE 237
Query: 730 WDR 738
WD+
Sbjct: 238 WDK 240
>ref|XP_006302759.1| hypothetical protein CARUB_v10020880mg [Capsella rubella]
gi|482571469|gb|EOA35657.1| hypothetical protein
CARUB_v10020880mg [Capsella rubella]
Length = 235
Score = 267 bits (683), Expect = 4e-69
Identities = 126/189 (66%), Positives = 155/189 (82%)
Frame = +1
Query: 172 KPTARTFAPYSIYKGKAALSADPLLPMFSQLESGDYRVERRGVIMLTFWPAIGERKYDWD 351
KP+ R FAPY+I+KGKAALS +P+LP F++++SG+ R++RRG +M+TF PA GERKYDW+
Sbjct: 47 KPSGRVFAPYAIFKGKAALSVEPVLPTFTEIDSGNLRLDRRGSLMMTFMPASGERKYDWE 106
Query: 352 KRQKFALSATEVGSLISLGSKDSCEFFHDPSMLSSNAGQVRKSLSIKAHADGSGYFVSLS 531
K+QKFALS TEVGSLIS+GSKDS EFFHDPSM SSNAGQVRKSLSIK HADGSGYF+SL
Sbjct: 107 KKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSIKPHADGSGYFISLG 166
Query: 532 VVNNILKTNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQQPHYASKSSLGAVPVP 711
V+N+ILKTNDR VVPVTTAEF VM+ AF+F LPH+MGWDR T+Q +++ P
Sbjct: 167 VINSILKTNDRIVVPVTTAEFTVMKTAFSFVLPHLMGWDRLTDQDGTGTQRTTSHGNTDP 226
Query: 712 ELQTSEWDR 738
+ EWD+
Sbjct: 227 QQLEQEWDK 235
>ref|XP_006302758.1| hypothetical protein CARUB_v10020880mg [Capsella rubella]
gi|482571468|gb|EOA35656.1| hypothetical protein
CARUB_v10020880mg [Capsella rubella]
Length = 234
Score = 267 bits (683), Expect = 4e-69
Identities = 126/189 (66%), Positives = 155/189 (82%)
Frame = +1
Query: 172 KPTARTFAPYSIYKGKAALSADPLLPMFSQLESGDYRVERRGVIMLTFWPAIGERKYDWD 351
KP+ R FAPY+I+KGKAALS +P+LP F++++SG+ R++RRG +M+TF PA GERKYDW+
Sbjct: 46 KPSGRVFAPYAIFKGKAALSVEPVLPTFTEIDSGNLRLDRRGSLMMTFMPASGERKYDWE 105
Query: 352 KRQKFALSATEVGSLISLGSKDSCEFFHDPSMLSSNAGQVRKSLSIKAHADGSGYFVSLS 531
K+QKFALS TEVGSLIS+GSKDS EFFHDPSM SSNAGQVRKSLSIK HADGSGYF+SL
Sbjct: 106 KKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSIKPHADGSGYFISLG 165
Query: 532 VVNNILKTNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQQPHYASKSSLGAVPVP 711
V+N+ILKTNDR VVPVTTAEF VM+ AF+F LPH+MGWDR T+Q +++ P
Sbjct: 166 VINSILKTNDRIVVPVTTAEFTVMKTAFSFVLPHLMGWDRLTDQDGTGTQRTTSHGNTDP 225
Query: 712 ELQTSEWDR 738
+ EWD+
Sbjct: 226 QQLEQEWDK 234
>ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata]
gi|297334668|gb|EFH65086.1| ATWHY2 [Arabidopsis lyrata
subsp. lyrata]
Length = 242
Score = 266 bits (679), Expect = 1e-68
Identities = 137/210 (65%), Positives = 164/210 (78%), Gaps = 9/210 (4%)
Frame = +1
Query: 136 TSTAMPKFGSDGK----PTARTFAPYSIYKGKAALSADPLLPMFSQLESGDYRVERRGVI 303
+S++ P G GK P+ R FAPYSI+KGKAALS +P+LP F++++SG+ R++RRG +
Sbjct: 37 SSSSTPGRGFSGKDAPKPSGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSL 96
Query: 304 MLTFWPAIGERKYDWDKRQKFALSATEVGSLISLGSKDSCEFFHDPSMLSSNAGQVRKSL 483
M+TF PAIGERKYDW+K+QKFALS TEVGSLIS+GSKDS EFFHDPSM SSNAGQVRKSL
Sbjct: 97 MMTFMPAIGERKYDWEKKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSL 156
Query: 484 SIKAHADGSGYFVSLSVVNNILKTNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQ 663
SIK HADGSGYF+SLSV N ILKTND FVVPVT AEFAVM+ AF+FALPHIMGW+R T Q
Sbjct: 157 SIKPHADGSGYFISLSVNNGILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLTGQ 216
Query: 664 QPHYASKSSLGAVPVPELQTS-----EWDR 738
+ +L V L+T EWD+
Sbjct: 217 ----GNTEALPPRNVTHLKTDPQLELEWDK 242
>gb|AAG51881.1|AC016162_2 unknown protein; 79476-81015 [Arabidopsis thaliana]
Length = 237
Score = 265 bits (678), Expect = 2e-68
Identities = 142/230 (61%), Positives = 175/230 (76%), Gaps = 7/230 (3%)
Frame = +1
Query: 70 RSLVGAATNDFKLLRCITTQTGTSTAMPKF-GSDG-KPTARTFAPYSIYKGKAALSADPL 243
+SL A+T LR + + +ST F G D KP+ R FAPYSI+KGKAALS +P+
Sbjct: 17 KSLFEAST-----LRGFASWSNSSTPGRGFPGKDAAKPSGRLFAPYSIFKGKAALSVEPV 71
Query: 244 LPMFSQLESGDYRVERRGVIMLTFWPAIGERKYDWDKRQKFALSATEVGSLISLGSKDSC 423
LP F++++SG+ R++RRG +M+TF PAIGERKYDW+K+QKFALS TEVGSLIS+GSKDS
Sbjct: 72 LPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEKKQKFALSPTEVGSLISMGSKDSS 131
Query: 424 EFFHDPSMLSSNAGQVRKSLSIKAHADGSGYFVSLSVVNNILKTNDRFVVPVTTAEFAVM 603
EFFHDPSM SSNAGQVRKSLS+K HADGSGYF+SLSV N+ILKTND FVVPVT AEFAVM
Sbjct: 132 EFFHDPSMKSSNAGQVRKSLSVKPHADGSGYFISLSVNNSILKTNDYFVVPVTKAEFAVM 191
Query: 604 RAAFTFALPHIMGWDRCTNQQPHYASKSSLGAVPVPELQTS-----EWDR 738
+ AF+FALPHIMGW+R T + + +L + V L+T EWD+
Sbjct: 192 KTAFSFALPHIMGWNRLTG----HVNTEALPSRNVSHLKTEPQLELEWDK 237
>ref|NP_177282.2| single-stranded DNA-binding protein WHY2 [Arabidopsis thaliana]
gi|75161474|sp|Q8VYF7.1|WHY2_ARATH RecName:
Full=Single-stranded DNA-binding protein WHY2,
mitochondrial; AltName: Full=Protein WHIRLY 2;
Short=AtWHY2; Flags: Precursor
gi|18175814|gb|AAL59932.1| unknown protein [Arabidopsis
thaliana] gi|21689867|gb|AAM67494.1| unknown protein
[Arabidopsis thaliana] gi|225898076|dbj|BAH30370.1|
hypothetical protein [Arabidopsis thaliana]
gi|332197060|gb|AEE35181.1| single-stranded DNA-binding
protein WHY2 [Arabidopsis thaliana]
Length = 238
Score = 265 bits (678), Expect = 2e-68
Identities = 142/230 (61%), Positives = 175/230 (76%), Gaps = 7/230 (3%)
Frame = +1
Query: 70 RSLVGAATNDFKLLRCITTQTGTSTAMPKF-GSDG-KPTARTFAPYSIYKGKAALSADPL 243
+SL A+T LR + + +ST F G D KP+ R FAPYSI+KGKAALS +P+
Sbjct: 18 KSLFEAST-----LRGFASWSNSSTPGRGFPGKDAAKPSGRLFAPYSIFKGKAALSVEPV 72
Query: 244 LPMFSQLESGDYRVERRGVIMLTFWPAIGERKYDWDKRQKFALSATEVGSLISLGSKDSC 423
LP F++++SG+ R++RRG +M+TF PAIGERKYDW+K+QKFALS TEVGSLIS+GSKDS
Sbjct: 73 LPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEKKQKFALSPTEVGSLISMGSKDSS 132
Query: 424 EFFHDPSMLSSNAGQVRKSLSIKAHADGSGYFVSLSVVNNILKTNDRFVVPVTTAEFAVM 603
EFFHDPSM SSNAGQVRKSLS+K HADGSGYF+SLSV N+ILKTND FVVPVT AEFAVM
Sbjct: 133 EFFHDPSMKSSNAGQVRKSLSVKPHADGSGYFISLSVNNSILKTNDYFVVPVTKAEFAVM 192
Query: 604 RAAFTFALPHIMGWDRCTNQQPHYASKSSLGAVPVPELQTS-----EWDR 738
+ AF+FALPHIMGW+R T + + +L + V L+T EWD+
Sbjct: 193 KTAFSFALPHIMGWNRLTG----HVNTEALPSRNVSHLKTEPQLELEWDK 238
>pdb|4KOP|A Chain A, Crystal Structure Of Why2 From Arabidopsis Thaliana
gi|557805000|pdb|4KOP|B Chain B, Crystal Structure Of
Why2 From Arabidopsis Thaliana gi|557805001|pdb|4KOP|C
Chain C, Crystal Structure Of Why2 From Arabidopsis
Thaliana gi|557805002|pdb|4KOP|D Chain D, Crystal
Structure Of Why2 From Arabidopsis Thaliana
Length = 177
Score = 264 bits (675), Expect = 3e-68
Identities = 125/168 (74%), Positives = 148/168 (88%)
Frame = +1
Query: 172 KPTARTFAPYSIYKGKAALSADPLLPMFSQLESGDYRVERRGVIMLTFWPAIGERKYDWD 351
KP+ R FAPYSI+KGKAALS +P+LP F++++SG+ R++RRG +M+TF PAIGERKYDW+
Sbjct: 6 KPSGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWE 65
Query: 352 KRQKFALSATEVGSLISLGSKDSCEFFHDPSMLSSNAGQVRKSLSIKAHADGSGYFVSLS 531
K+QKFALS TEVGSLIS+GSKDS EFFHDPSM SSNAGQVRKSLS+K HADGSGYF+SLS
Sbjct: 66 KKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSVKPHADGSGYFISLS 125
Query: 532 VVNNILKTNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQQPHY 675
V N+ILKTND FVVPVT AEFAVM+ AF+FALPHIMGW+R T H+
Sbjct: 126 VNNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLTGHLEHH 173
>ref|XP_006390788.1| hypothetical protein EUTSA_v10019058mg [Eutrema salsugineum]
gi|557087222|gb|ESQ28074.1| hypothetical protein
EUTSA_v10019058mg [Eutrema salsugineum]
Length = 241
Score = 261 bits (667), Expect = 3e-67
Identities = 136/217 (62%), Positives = 169/217 (77%), Gaps = 8/217 (3%)
Frame = +1
Query: 37 LLQSSRDPLPLRSLVGAATN----DFKL--LRCITTQTGTSTAMPKF-GSDG-KPTARTF 192
+++ +R L RSL + + +FK+ LR T+ +ST+ F G D KP+ R F
Sbjct: 1 MMKQARTLLSSRSLCDQSKSLFEGNFKVSPLRGFATRADSSTSARGFSGKDAAKPSGRVF 60
Query: 193 APYSIYKGKAALSADPLLPMFSQLESGDYRVERRGVIMLTFWPAIGERKYDWDKRQKFAL 372
APY+I+KGKAALS +P+LP F+++E G+ R++RRG +M+TF PA GERKYDW+K+Q FAL
Sbjct: 61 APYAIFKGKAALSVEPVLPTFARIEPGNLRIDRRGSVMMTFMPASGERKYDWEKKQLFAL 120
Query: 373 SATEVGSLISLGSKDSCEFFHDPSMLSSNAGQVRKSLSIKAHADGSGYFVSLSVVNNILK 552
SATEVGSLIS+GS DS EFFHDPSM SSNAGQVRKSLSIK HADGSGYF+SL+V N+ILK
Sbjct: 121 SATEVGSLISMGSNDSSEFFHDPSMKSSNAGQVRKSLSIKPHADGSGYFISLTVNNSILK 180
Query: 553 TNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQ 663
TN+R VVPVTTAEF VM+ AF+FALPHIMGWDR Q
Sbjct: 181 TNERIVVPVTTAEFVVMKTAFSFALPHIMGWDRILGQ 217
>gb|ADL36848.1| WHY domain class transcription factor [Malus domestica]
Length = 237
Score = 261 bits (666), Expect = 4e-67
Identities = 138/218 (63%), Positives = 159/218 (72%), Gaps = 2/218 (0%)
Frame = +1
Query: 91 TNDFKLLRCITTQTGTSTAMPKFGSDGKPTARTFAPYSIYKGKAALSADPLLPMFSQLES 270
T D + T T STA KF G + + +A + I+KGKAALS P+LP F++LES
Sbjct: 21 TRDASSMYAYTHITRFSTATQKFSVKGPSSHQVYASFDIFKGKAALSLTPVLPTFTKLES 80
Query: 271 GDYRVERRGVIMLTFWPAIGERKYDWDKRQKFALSATEVGSLISLGSKDSCEFFHDPSML 450
G V+RRG +ML F PAIGERKYDW+KRQ FALSATEVG+LISLGS DSCE FHDPSM
Sbjct: 81 GSLVVDRRGSVMLKFTPAIGERKYDWEKRQMFALSATEVGALISLGSNDSCELFHDPSMK 140
Query: 451 SSNAGQVRKSLSIKAHADGSGYFVSLSVVNNILKTNDRFVVPVTTAEFAVMRAAFTFALP 630
SSNAGQVRKSLSIK HADGSGYFVSL+VVNN+LKT + F VPV TAEFAVM+ A +FALP
Sbjct: 141 SSNAGQVRKSLSIKPHADGSGYFVSLTVVNNLLKTRESFSVPVMTAEFAVMKTACSFALP 200
Query: 631 HIMGWDRCTNQQPHYASKSSLG--AVPVPELQTSEWDR 738
HIMGWDR TN+ P G + VP+L EWDR
Sbjct: 201 HIMGWDRLTNKMPAGGGGGGGGQESKAVPQL-LEEWDR 237
>ref|XP_006390787.1| hypothetical protein EUTSA_v10019058mg [Eutrema salsugineum]
gi|557087221|gb|ESQ28073.1| hypothetical protein
EUTSA_v10019058mg [Eutrema salsugineum]
Length = 240
Score = 259 bits (663), Expect = 8e-67
Identities = 129/187 (68%), Positives = 154/187 (82%), Gaps = 2/187 (1%)
Frame = +1
Query: 109 LRCITTQTGTSTAMPKF-GSDG-KPTARTFAPYSIYKGKAALSADPLLPMFSQLESGDYR 282
LR T+ +ST+ F G D KP+ R FAPY+I+KGKAALS +P+LP F+++E G+ R
Sbjct: 30 LRGFATRADSSTSARGFSGKDAAKPSGRVFAPYAIFKGKAALSVEPVLPTFARIEPGNLR 89
Query: 283 VERRGVIMLTFWPAIGERKYDWDKRQKFALSATEVGSLISLGSKDSCEFFHDPSMLSSNA 462
++RRG +M+TF PA GERKYDW+K+Q FALSATEVGSLIS+GS DS EFFHDPSM SSNA
Sbjct: 90 IDRRGSVMMTFMPASGERKYDWEKKQLFALSATEVGSLISMGSNDSSEFFHDPSMKSSNA 149
Query: 463 GQVRKSLSIKAHADGSGYFVSLSVVNNILKTNDRFVVPVTTAEFAVMRAAFTFALPHIMG 642
GQVRKSLSIK HADGSGYF+SL+V N+ILKTN+R VVPVTTAEF VM+ AF+FALPHIMG
Sbjct: 150 GQVRKSLSIKPHADGSGYFISLTVNNSILKTNERIVVPVTTAEFVVMKTAFSFALPHIMG 209
Query: 643 WDRCTNQ 663
WDR Q
Sbjct: 210 WDRILGQ 216
>gb|EMJ01725.1| hypothetical protein PRUPE_ppa011529mg [Prunus persica]
Length = 207
Score = 254 bits (648), Expect = 5e-65
Identities = 130/210 (61%), Positives = 149/210 (70%)
Frame = +1
Query: 109 LRCITTQTGTSTAMPKFGSDGKPTARTFAPYSIYKGKAALSADPLLPMFSQLESGDYRVE 288
+ T + STA F G FA ++I+KGKAALS +P+LP F++LESG+ V
Sbjct: 1 MHAYTHSSSFSTASKSFSVKGTSAHNVFASFNIFKGKAALSLNPVLPTFTKLESGNLVVS 60
Query: 289 RRGVIMLTFWPAIGERKYDWDKRQKFALSATEVGSLISLGSKDSCEFFHDPSMLSSNAGQ 468
RRGV+ML F PAIGERKYDW+K Q FALSATEVGSLISLG KDSCE FHDPSM SSNAGQ
Sbjct: 61 RRGVVMLKFTPAIGERKYDWEKNQVFALSATEVGSLISLGPKDSCELFHDPSMKSSNAGQ 120
Query: 469 VRKSLSIKAHADGSGYFVSLSVVNNILKTNDRFVVPVTTAEFAVMRAAFTFALPHIMGWD 648
VRKSLSIK HADGSGY VSL+VVNN+LKT + F+VPVT AEFAVM+ A +F LPHIMGWD
Sbjct: 121 VRKSLSIKCHADGSGYLVSLAVVNNLLKTKENFIVPVTAAEFAVMKTACSFVLPHIMGWD 180
Query: 649 RCTNQQPHYASKSSLGAVPVPELQTSEWDR 738
R + P VP EWDR
Sbjct: 181 RLMSNMPTVVGGQQSKVVP---QLLDEWDR 207
>gb|AFK37234.1| unknown [Lotus japonicus]
Length = 235
Score = 254 bits (648), Expect = 5e-65
Identities = 131/217 (60%), Positives = 162/217 (74%)
Frame = +1
Query: 16 MFKLSKLLLQSSRDPLPLRSLVGAATNDFKLLRCITTQTGTSTAMPKFGSDGKPTARTFA 195
M KL ++L +SR+ + ++ ++ N + ++ A + + G T R FA
Sbjct: 1 MLKLLRVLPSTSRNWVLEMEVLSSSRNP-------QVRDFSTAARETYVAKGYTTDRVFA 53
Query: 196 PYSIYKGKAALSADPLLPMFSQLESGDYRVERRGVIMLTFWPAIGERKYDWDKRQKFALS 375
PY +YKGKAA+S P+LP F++L+SG VERRG IM+ F PAIGERKYDW+KRQKFALS
Sbjct: 54 PYYVYKGKAAMSLSPVLPTFTKLDSGALVVERRGSIMMVFTPAIGERKYDWEKRQKFALS 113
Query: 376 ATEVGSLISLGSKDSCEFFHDPSMLSSNAGQVRKSLSIKAHADGSGYFVSLSVVNNILKT 555
ATEVGSLI++G +DSCEFFHDPSM SSNAGQVRKSLSIK HA+ SGYFVSL+VVNN+L
Sbjct: 114 ATEVGSLIAMGPQDSCEFFHDPSMSSSNAGQVRKSLSIKPHANSSGYFVSLTVVNNLLNA 173
Query: 556 NDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQQ 666
+ F VPVTTAEFAVM+ A +FALPHIMGWDR TNQQ
Sbjct: 174 KENFNVPVTTAEFAVMKTACSFALPHIMGWDRLTNQQ 210
>gb|EOY16918.1| Whirly 2, putative isoform 1 [Theobroma cacao]
Length = 236
Score = 253 bits (645), Expect = 1e-64
Identities = 125/205 (60%), Positives = 156/205 (76%)
Frame = +1
Query: 124 TQTGTSTAMPKFGSDGKPTARTFAPYSIYKGKAALSADPLLPMFSQLESGDYRVERRGVI 303
++ ST++ F S G TAR APY++YKGKAA S PLLP FS+++SG+ +++RRG +
Sbjct: 34 SRAAISTSIHDFASKGNSTARVIAPYTVYKGKAAFSVTPLLPTFSKIDSGNLKLDRRGAM 93
Query: 304 MLTFWPAIGERKYDWDKRQKFALSATEVGSLISLGSKDSCEFFHDPSMLSSNAGQVRKSL 483
MLTFWPA+GERKYDW+KRQ+FALS TEVGSLIS+G+ D EFFHDPSMLSSNAGQV K L
Sbjct: 94 MLTFWPAVGERKYDWEKRQRFALSPTEVGSLISMGAHDVSEFFHDPSMLSSNAGQVSKKL 153
Query: 484 SIKAHADGSGYFVSLSVVNNILKTNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQ 663
IKA G+GY +SL+V NNILK+N+RF VP+TTAEFAV++ A +FALPHI+GWD TN
Sbjct: 154 YIKALDGGNGYMISLTVSNNILKSNERFNVPITTAEFAVLKTACSFALPHIIGWDWLTNH 213
Query: 664 QPHYASKSSLGAVPVPELQTSEWDR 738
SS + P+L SEWDR
Sbjct: 214 SRKGIEGSS--SKVNPKLLDSEWDR 236