BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00012376
         (1299 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   108   8e-38
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...   111   4e-35
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626...   103   2e-33
ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A...   103   2e-33
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g...   103   4e-33
gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japo...   103   4e-33
gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus pe...    97   7e-33
gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus pe...    97   7e-33
gb|EMJ26294.1| hypothetical protein PRUPE_ppa016563mg, partial [...    96   1e-32
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    95   8e-32
ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A...    94   1e-31
gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [...   102   1e-31
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    95   2e-31
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    96   2e-31
gb|AAF18538.1|AC006551_24 Very similar to retrotransposon revers...    92   1e-30
ref|NP_194638.1| ribonuclease H-like protein [Arabidopsis thalia...    92   2e-30
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    89   2e-30
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1...    89   5e-30
gb|AAD32950.1| putative non-LTR retroelement reverse transcripta...    90   7e-30
gb|AAD24601.1| putative non-LTR retroelement reverse transcripta...   100   9e-30

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  108 bits (270), Expect(2) = 8e-38
 Identities = 69/241 (28%), Positives = 113/241 (46%), Gaps = 14/241 (5%)
 Frame = +3

Query: 294  VCELLKDQGKNWNFELNDRLFLPHKVQAIHDTPI*TNWDRDKVVWTLTKDQVYSVKSAYK 473
            VCEL+ +    WN EL + LF P +  AI   P+      D+ +W ++K+  ++V+SAY 
Sbjct: 972  VCELISND--RWNVELLNTLFQPWESTAIQRIPVALQKKPDQWMWMMSKNGQFTVRSAYY 1029

Query: 474  ALSDDVLQDQPEGSNSMRDSNF-LWKKAWKLHIKGKVKMFLWKCLHGIVPVQGQLVRRGI 650
                ++L+D+  G ++ R  N  LW+K WK  I  KVK+F WK +H  + V   + +RG+
Sbjct: 1030 ---HELLEDRKTGPSTSRGPNLKLWQKIWKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGM 1086

Query: 651  QVDTICKWYGEDDKSVEHLLFTCERAIKVWKLAQI-------------WWSEISNPTCPV 791
             +D  C   GE +++ EHL++ C+ + + W ++ +              W E    T   
Sbjct: 1087 NIDGACPRCGEKEETTEHLIWGCDESSRAWYISPLRIHTGNIEAGSFRIWVESLLDTHKD 1146

Query: 792  DNWWGNLCRGTWDQVFQDPVQLSTYILWWLWKTRNTCAFEGKFTSARDTVSFAWKEWNEY 971
              WW                 L   I W +W  RN   FE K  + ++ V  A +   E+
Sbjct: 1147 TEWWA----------------LFWMICWNIWLGRNKWVFEKKKLAFQEVVERAVRGVMEF 1190

Query: 972  E 974
            E
Sbjct: 1191 E 1191



 Score = 77.0 bits (188), Expect(2) = 8e-38
 Identities = 35/80 (43%), Positives = 51/80 (63%)
 Frame = +1

Query: 7    FNDALLAKQLWRVLVHPNRLPS*VLRARYCPKGGVLNTCAKPTDSFIWKSIINAK*VLKQ 186
            FN ALLAKQ WR+L  P+ L + V++ +Y P+   L     P  SF  KSI++A+ V+++
Sbjct: 870  FNRALLAKQAWRILTKPDSLMARVIKGKYFPRSNFLEARVSPNMSFTCKSILSARAVIQK 929

Query: 187  GLYFAIGDGKSTRIWEHPWI 246
            G+   IGDG+ T IW  PW+
Sbjct: 930  GMCRVIGDGRDTTIWGDPWV 949


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
            (fragment)
          Length = 1365

 Score =  111 bits (278), Expect(2) = 4e-35
 Identities = 74/236 (31%), Positives = 118/236 (50%), Gaps = 8/236 (3%)
 Frame = +3

Query: 294  VCELLKDQGKNWNFELNDRLFLPHKVQAI-HDTPI*TNWDRDKVVWTLTKDQVYSVKSAY 470
            V +L+    +NWN  +   LF    V+ I    P+   +  D   W  + + +YSVK+ Y
Sbjct: 960  VSQLIDPTSRNWNLNMLRDLFPWKDVEIILKQRPL--FFKEDSFCWLHSHNGLYSVKTGY 1017

Query: 471  KALSDDVLQDQPEGSNSMRDSNFLWKKAWKLHIKGKVKMFLWKCLHGIVPVQGQLVRRGI 650
            + LS  V     + +      N L+ K W LH   K+++FLWK LHG +PV+ +L  RGI
Sbjct: 1018 EFLSKQVHHRLYQEAKVKPSVNSLFDKIWNLHTAPKIRIFLWKALHGAIPVEDRLRTRGI 1077

Query: 651  QVDTICKWYGEDDKSVEHLLFTCERAIKVWKLAQI--WWSEISNPTCPVDNWWGNLCRGT 824
            + D  C     +++++ H+LF C  A +VW +  +    SE SN        + N+ R  
Sbjct: 1078 RSDDGCLMCDTENETINHILFECPLARQVWAITHLSSAGSEFSNSV------YTNMSR-L 1130

Query: 825  WDQVFQDPVQ-----LSTYILWWLWKTRNTCAFEGKFTSARDTVSFAWKEWNEYES 977
             D   Q+ +      +S +ILW+LWK RN   FEGK +     V  A++ ++E+ S
Sbjct: 1131 IDLTQQNDLPHHLRFVSPWILWFLWKNRNALLFEGKGSITTTLVDKAYEAYHEWFS 1186



 Score = 65.1 bits (157), Expect(2) = 4e-35
 Identities = 33/83 (39%), Positives = 45/83 (54%)
 Frame = +1

Query: 7    FNDALLAKQLWRVLVHPNRLPS*VLRARYCPKGGVLNTCAKPTDSFIWKSIINAK*VLKQ 186
            FN ALLAKQ WRVL     L S V ++RY      L+       S+ W+SI+  + +L Q
Sbjct: 860  FNQALLAKQAWRVLQEKGSLFSRVFQSRYFSNSDFLSATRGSRPSYAWRSILFGRELLMQ 919

Query: 187  GLYFAIGDGKSTRIWEHPWIRQG 255
            GL   IG+G+ T +W   W+  G
Sbjct: 920  GLRTVIGNGQKTFVWTDKWLHDG 942


>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
          Length = 1452

 Score =  103 bits (256), Expect(2) = 2e-33
 Identities = 62/213 (29%), Positives = 105/213 (49%)
 Frame = +3

Query: 294  VCELLKDQGKNWNFELNDRLFLPHKVQAIHDTPI*TNWDRDKVVWTLTKDQVYSVKSAYK 473
            V +L+  + K W  +  ++ F+   ++AI    + +  + D+V+W   K   YSVKS Y+
Sbjct: 1054 VADLIDSENK-WRVDRLEQHFMKEDIEAILKILLPSGKEEDEVLWHFDKKGEYSVKSGYQ 1112

Query: 474  ALSDDVLQDQPEGSNSMRDSNFLWKKAWKLHIKGKVKMFLWKCLHGIVPVQGQLVRRGIQ 653
               +    ++PE SNS   S+ LWK  W L +  KVK+F+W+ L  I+P    L +R   
Sbjct: 1113 LALNQNFPNEPESSNS---SSRLWKIPWMLDLPEKVKIFMWRALKNILPTAENLWKRRSL 1169

Query: 654  VDTICKWYGEDDKSVEHLLFTCERAIKVWKLAQIWWSEISNPTCPVDNWWGNLCRGTWDQ 833
             + IC+      ++V H+L  C+ A K+W LA +    I  P+   +  + +  +  W +
Sbjct: 1170 QEPICQRCKLQVETVSHVLIECKAARKIWDLAPL----IVQPSKDHNQDFFSAIQEMWSR 1225

Query: 834  VFQDPVQLSTYILWWLWKTRNTCAFEGKFTSAR 932
                  +L     W +W  RN   FEGK + +R
Sbjct: 1226 SSTAEAELMIVYCWVIWSARNKFIFEGKKSDSR 1258



 Score = 67.8 bits (164), Expect(2) = 2e-33
 Identities = 33/80 (41%), Positives = 49/80 (61%)
 Frame = +1

Query: 7    FNDALLAKQLWRVLVHPNRLPS*VLRARYCPKGGVLNTCAKPTDSFIWKSIINAK*VLKQ 186
            FN AL+AKQ WR++ +PN L + V++ARY       N       SFIW+SI+    V+K+
Sbjct: 955  FNQALVAKQGWRLVRYPNSLMARVMKARYYKNSTFWNAKVGSNPSFIWRSILWGSQVIKK 1014

Query: 187  GLYFAIGDGKSTRIWEHPWI 246
            G+ + IGDGK   +++  WI
Sbjct: 1015 GVRWRIGDGKKVLVYKDKWI 1034


>ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 765

 Score =  103 bits (256), Expect(2) = 2e-33
 Identities = 62/213 (29%), Positives = 105/213 (49%)
 Frame = +3

Query: 294 VCELLKDQGKNWNFELNDRLFLPHKVQAIHDTPI*TNWDRDKVVWTLTKDQVYSVKSAYK 473
           V +L+  + K W  +  ++ F+   ++AI    + +  + D+V+W   K   YSVKS Y+
Sbjct: 367 VADLIDSENK-WRVDRLEQHFMKEDIEAILKILLPSGKEEDEVLWHFDKKGEYSVKSGYQ 425

Query: 474 ALSDDVLQDQPEGSNSMRDSNFLWKKAWKLHIKGKVKMFLWKCLHGIVPVQGQLVRRGIQ 653
              +    ++PE SNS   S+ LWK  W L +  KVK+F+W+ L  I+P    L +R   
Sbjct: 426 LALNQNFPNEPESSNS---SSRLWKIPWMLDLPEKVKIFMWRALKNILPTAENLWKRRSL 482

Query: 654 VDTICKWYGEDDKSVEHLLFTCERAIKVWKLAQIWWSEISNPTCPVDNWWGNLCRGTWDQ 833
            + IC+      ++V H+L  C+ A K+W LA +    I  P+   +  + +  +  W +
Sbjct: 483 QEPICQRCKLQVETVSHVLIECKAARKIWDLAPL----IVQPSKDHNQDFFSAIQEMWSR 538

Query: 834 VFQDPVQLSTYILWWLWKTRNTCAFEGKFTSAR 932
                 +L     W +W  RN   FEGK + +R
Sbjct: 539 SSTAEAELMIVYCWVIWSARNKFIFEGKKSDSR 571



 Score = 67.8 bits (164), Expect(2) = 2e-33
 Identities = 33/80 (41%), Positives = 49/80 (61%)
 Frame = +1

Query: 7   FNDALLAKQLWRVLVHPNRLPS*VLRARYCPKGGVLNTCAKPTDSFIWKSIINAK*VLKQ 186
           FN AL+AKQ WR++ +PN L + V++ARY       N       SFIW+SI+    V+K+
Sbjct: 268 FNQALVAKQGWRLVRYPNSLMARVMKARYYKNSTFWNAKVGSNPSFIWRSILWGSQVIKK 327

Query: 187 GLYFAIGDGKSTRIWEHPWI 246
           G+ + IGDGK   +++  WI
Sbjct: 328 GVRWRIGDGKKVLVYKDKWI 347


>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
            gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
            Japonica Group]
          Length = 1453

 Score =  103 bits (256), Expect(2) = 4e-33
 Identities = 69/227 (30%), Positives = 103/227 (45%), Gaps = 9/227 (3%)
 Frame = +3

Query: 243  DQTRVCIDSFGAAKFNSVCELLKDQGKNWNFELNDRLFLPHKVQAIHDTPI*TNWDRDKV 422
            D TR  I   G      V EL+     +W+ EL  + F P  V  I   P+    D D +
Sbjct: 1074 DHTRRPITPRGRNLVTRVEELIDPSTGSWDVELLTQTFWPEDVNMIRTIPVHIEMD-DML 1132

Query: 423  VWTLTKDQVYSVKSAYKALSDDVLQDQPEGS----NSMRDSNFLWKKAWKLHIKGKVKMF 590
             W   +  ++SVKSAYK   D  LQ +  GS    N   +    WKK WK+ + GKVK F
Sbjct: 1133 AWHYDEKGLFSVKSAYKVQRDGELQRRKRGSAGLSNGSTEREMYWKKVWKMQLPGKVKHF 1192

Query: 591  LWKCLHGIVPVQGQLVRRGIQVDTICKWYGEDDKSVEHLLFTCERAIKVWK--LAQIWWS 764
            +W+  H I+ ++  L +RG+ +D+ C      ++   HL F C++  KVW+    +I   
Sbjct: 1193 IWRFSHNILALRVNLQQRGMDLDSRCIICNRMNEDAGHLFFKCKKVKKVWQENNLEILRQ 1252

Query: 765  EISNPTCPVDNWWGNLCRGTWDQVFQDP---VQLSTYILWWLWKTRN 896
            E++              R   + VF  P   + L++  LW  W  RN
Sbjct: 1253 ELAEKRSG---------REVMETVFNRPAKEILLASITLWQWWSERN 1290



 Score = 66.6 bits (161), Expect(2) = 4e-33
 Identities = 30/80 (37%), Positives = 47/80 (58%)
 Frame = +1

Query: 7    FNDALLAKQLWRVLVHPNRLPS*VLRARYCPKGGVLNTCAKPTDSFIWKSIINAK*VLKQ 186
            FN A+LAKQ WR++ +P  L + VL+A+Y P G + +       S+ W+SI      L+ 
Sbjct: 992  FNLAMLAKQGWRLIQNPESLCAQVLKAKYYPSGNIFSAKKCANMSYTWRSICRGLLTLRD 1051

Query: 187  GLYFAIGDGKSTRIWEHPWI 246
            G+ + +G+G +  IW  PWI
Sbjct: 1052 GMIWRVGNGAAINIWSDPWI 1071


>gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japonica Group]
          Length = 560

 Score =  103 bits (256), Expect(2) = 4e-33
 Identities = 69/227 (30%), Positives = 103/227 (45%), Gaps = 9/227 (3%)
 Frame = +3

Query: 243 DQTRVCIDSFGAAKFNSVCELLKDQGKNWNFELNDRLFLPHKVQAIHDTPI*TNWDRDKV 422
           D TR  I   G      V EL+     +W+ EL  + F P  V  I   P+    D D +
Sbjct: 181 DHTRRPITPRGRNLVTRVEELIDPSTGSWDVELLTQTFWPEDVNMIRTIPVHIEMD-DML 239

Query: 423 VWTLTKDQVYSVKSAYKALSDDVLQDQPEGS----NSMRDSNFLWKKAWKLHIKGKVKMF 590
            W   +  ++SVKSAYK   D  LQ +  GS    N   +    WKK WK+ + GKVK F
Sbjct: 240 AWHYDEKGLFSVKSAYKVQRDGELQRRKRGSAGLSNGSTEREMYWKKVWKMQLPGKVKHF 299

Query: 591 LWKCLHGIVPVQGQLVRRGIQVDTICKWYGEDDKSVEHLLFTCERAIKVWK--LAQIWWS 764
           +W+  H I+ ++  L +RG+ +D+ C      ++   HL F C++  KVW+    +I   
Sbjct: 300 IWRFSHNILALRVNLQQRGMDLDSRCIICNRMNEDAGHLFFKCKKVKKVWQENNLEILRQ 359

Query: 765 EISNPTCPVDNWWGNLCRGTWDQVFQDP---VQLSTYILWWLWKTRN 896
           E++              R   + VF  P   + L++  LW  W  RN
Sbjct: 360 ELAEKRSG---------REVMETVFNRPAKEILLASITLWQWWSERN 397



 Score = 66.6 bits (161), Expect(2) = 4e-33
 Identities = 30/80 (37%), Positives = 47/80 (58%)
 Frame = +1

Query: 7   FNDALLAKQLWRVLVHPNRLPS*VLRARYCPKGGVLNTCAKPTDSFIWKSIINAK*VLKQ 186
           FN A+LAKQ WR++ +P  L + VL+A+Y P G + +       S+ W+SI      L+ 
Sbjct: 99  FNLAMLAKQGWRLIQNPESLCAQVLKAKYYPSGNIFSAKKCANMSYTWRSICRGLLTLRD 158

Query: 187 GLYFAIGDGKSTRIWEHPWI 246
           G+ + +G+G +  IW  PWI
Sbjct: 159 GMIWRVGNGAAINIWSDPWI 178


>gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus persica]
          Length = 1755

 Score = 97.4 bits (241), Expect(2) = 7e-33
 Identities = 46/153 (30%), Positives = 82/153 (53%), Gaps = 1/153 (0%)
 Frame = +3

Query: 294  VCELLKDQGK-NWNFELNDRLFLPHKVQAIHDTPI*TNWDRDKVVWTLTKDQVYSVKSAY 470
            V EL+ ++G   W+ +  + LFLP  V  I   P+      D++VW   K  +++VKSAY
Sbjct: 1379 VSELICNEGSPQWDLQKLNNLFLPVDVVDIVRIPLSIRAPPDRIVWNYDKHGLFTVKSAY 1438

Query: 471  KALSDDVLQDQPEGSNSMRDSNFLWKKAWKLHIKGKVKMFLWKCLHGIVPVQGQLVRRGI 650
            +        D+ E S+S  D+  LW+  W   +  K+K+F W+  H I+P +  L+++G+
Sbjct: 1439 RVALRVTSGDEDESSSSNSDTGMLWRHIWNATVPTKLKIFAWRVAHDILPTKANLIKKGV 1498

Query: 651  QVDTICKWYGEDDKSVEHLLFTCERAIKVWKLA 749
             +  +C + G+  +S  H+L  C  A+  W ++
Sbjct: 1499 DMQDMCMFCGDITESALHVLAMCPFAVATWNIS 1531



 Score = 71.6 bits (174), Expect(2) = 7e-33
 Identities = 36/80 (45%), Positives = 49/80 (61%)
 Frame = +1

Query: 7    FNDALLAKQLWRVLVHPNRLPS*VLRARYCPKGGVLNTCAKPTDSFIWKSIINAK*VLKQ 186
            FN A+LAKQ WR++ +P+ L S +L+A+Y P+            S +WKSI  A+ VL+ 
Sbjct: 1279 FNMAMLAKQGWRLVHNPHSLASRLLKAKYFPQTNFWEATLGSRPSCVWKSIWTARKVLEM 1338

Query: 187  GLYFAIGDGKSTRIWEHPWI 246
            G  F IGDGKS RIW   W+
Sbjct: 1339 GSRFQIGDGKSVRIWGDKWV 1358


>gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus persica]
          Length = 1275

 Score = 97.4 bits (241), Expect(2) = 7e-33
 Identities = 46/153 (30%), Positives = 82/153 (53%), Gaps = 1/153 (0%)
 Frame = +3

Query: 294  VCELLKDQGK-NWNFELNDRLFLPHKVQAIHDTPI*TNWDRDKVVWTLTKDQVYSVKSAY 470
            V EL+ ++G   W+ +  + LFLP  V  I   P+      D++VW   K  +++VKSAY
Sbjct: 899  VSELICNEGSPQWDLQKLNNLFLPVDVVDIVRIPLSIRAPPDRIVWNYDKHGLFTVKSAY 958

Query: 471  KALSDDVLQDQPEGSNSMRDSNFLWKKAWKLHIKGKVKMFLWKCLHGIVPVQGQLVRRGI 650
            +        D+ E S+S  D+  LW+  W   +  K+K+F W+  H I+P +  L+++G+
Sbjct: 959  RVALRVTSGDEDESSSSNSDTGMLWRHIWNATVPTKLKIFAWRVAHDILPTKANLIKKGV 1018

Query: 651  QVDTICKWYGEDDKSVEHLLFTCERAIKVWKLA 749
             +  +C + G+  +S  H+L  C  A+  W ++
Sbjct: 1019 DMQDMCMFCGDITESALHVLAMCPFAVATWNIS 1051



 Score = 71.6 bits (174), Expect(2) = 7e-33
 Identities = 36/80 (45%), Positives = 49/80 (61%)
 Frame = +1

Query: 7    FNDALLAKQLWRVLVHPNRLPS*VLRARYCPKGGVLNTCAKPTDSFIWKSIINAK*VLKQ 186
            FN A+LAKQ WR++ +P+ L S +L+A+Y P+            S +WKSI  A+ VL+ 
Sbjct: 799  FNMAMLAKQGWRLVHNPHSLASRLLKAKYFPQTNFWEATLGSRPSCVWKSIWTARKVLEM 858

Query: 187  GLYFAIGDGKSTRIWEHPWI 246
            G  F IGDGKS RIW   W+
Sbjct: 859  GSRFQIGDGKSVRIWGDKWV 878


>gb|EMJ26294.1| hypothetical protein PRUPE_ppa016563mg, partial [Prunus persica]
          Length = 925

 Score = 96.3 bits (238), Expect(2) = 1e-32
 Identities = 45/153 (29%), Positives = 82/153 (53%), Gaps = 1/153 (0%)
 Frame = +3

Query: 294 VCELLKDQGK-NWNFELNDRLFLPHKVQAIHDTPI*TNWDRDKVVWTLTKDQVYSVKSAY 470
           V EL+ ++G   W+ +  + LFLP  V      P+      D++VW   K  +++VKSAY
Sbjct: 530 VSELICNEGSPQWDLQKLNNLFLPVDVVDFVRIPLSIRAPPDRIVWNYDKHGLFTVKSAY 589

Query: 471 KALSDDVLQDQPEGSNSMRDSNFLWKKAWKLHIKGKVKMFLWKCLHGIVPVQGQLVRRGI 650
           +        D+ E S+S  D++ LW+  W   +  K+K+F W+  H I+P +  L+++G+
Sbjct: 590 RVALRVTSGDEDESSSSNSDTSMLWRHIWNATVPTKLKIFAWRVAHDILPTKANLIKKGV 649

Query: 651 QVDTICKWYGEDDKSVEHLLFTCERAIKVWKLA 749
            +  +C + G+  +S  H+L  C  A+  W ++
Sbjct: 650 DMQDMCMFCGDITESALHVLAMCPFAVATWNIS 682



 Score = 72.0 bits (175), Expect(2) = 1e-32
 Identities = 38/92 (41%), Positives = 52/92 (56%)
 Frame = +1

Query: 7   FNDALLAKQLWRVLVHPNRLPS*VLRARYCPKGGVLNTCAKPTDSFIWKSIINAK*VLKQ 186
           FN A+LAKQ WR++ +P+ L S +L+A+Y P             S +WKSI  A+ VL+ 
Sbjct: 430 FNMAMLAKQGWRLVHNPHSLASRLLKAKYFPHTNFWEATLGSRPSCVWKSIWTARKVLEM 489

Query: 187 GLYFAIGDGKSTRIWEHPWIRQGCASIPSGQP 282
           G  F IGDGKS RIW   W+ +  A +    P
Sbjct: 490 GSRFQIGDGKSVRIWGDKWVPRPAAFVVITSP 521


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1225

 Score = 94.7 bits (234), Expect(2) = 8e-32
 Identities = 68/235 (28%), Positives = 108/235 (45%), Gaps = 3/235 (1%)
 Frame = +3

Query: 294  VCELLKDQGKNWNFELNDRLFLPHKVQAIHDTPI*TNWDRDKVVWTLTKDQVYSVKSAYK 473
            V +L+    K W       L  P  +  I        +  D   W+ TK   Y+VKS Y 
Sbjct: 841  VNDLIDPVTKQWKLGRLQELVDPSDIPLILGIRPSRTYKSDDFSWSFTKSGNYTVKSGYW 900

Query: 474  ALSD--DVLQDQPEGSNSMRDSNFLWKKAWKLHIKGKVKMFLWKCLHGIVPVQGQLVRRG 647
            A  D      D P    S+   + L  + WK+    K K F W+CL G +    +L  R 
Sbjct: 901  AARDLSRPTCDLPFQGPSV---SALQAQVWKIKTTRKFKHFEWQCLSGCLATNQRLFSRH 957

Query: 648  IQVDTICKWYGEDDKSVEHLLFTCERAIKVWKLAQIWWSEISNPTCPV-DNWWGNLCRGT 824
            I  + +C   G +++S+ HLLF C  + ++W L+ I  SE   P   +  N+   L RG 
Sbjct: 958  IGTEKVCPRCGAEEESINHLLFLCPPSRQIWALSPIPSSEYIFPRNSLFYNFDFLLSRGK 1017

Query: 825  WDQVFQDPVQLSTYILWWLWKTRNTCAFEGKFTSARDTVSFAWKEWNEYESRS*K 989
               + +D +++  +ILW++WK+RN   FE    S +  + FA +E N ++  + K
Sbjct: 1018 EFDIAEDIMEIFPWILWYIWKSRNRFIFENVIESPQVILDFAIQEANVWKQANSK 1072



 Score = 70.9 bits (172), Expect(2) = 8e-32
 Identities = 39/80 (48%), Positives = 46/80 (57%)
 Frame = +1

Query: 7   FNDALLAKQLWRVLVHPNRLPS*VLRARYCPKGGVLNTCAKPTDSFIWKSIINAK*VLKQ 186
           FN  LLAKQLWR++  PN L S VLR RY      +        SF W+SI+ AK +L  
Sbjct: 741 FNLVLLAKQLWRLIRFPNSLLSRVLRGRYFRYSDPIQIGKANRPSFGWRSIMAAKPLLLS 800

Query: 187 GLYFAIGDGKSTRIWEHPWI 246
           GL   IG G  TR+WE PWI
Sbjct: 801 GLRRTIGSGMLTRVWEDPWI 820


>ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 1152

 Score = 94.4 bits (233), Expect(2) = 1e-31
 Identities = 65/238 (27%), Positives = 107/238 (44%), Gaps = 8/238 (3%)
 Frame = +3

Query: 294  VCELLKDQGKNWNFELNDRLFLPHKVQAIHDTPI*TNWDRDKVVWTLTKDQVYSVKSAY- 470
            VCEL+++    WN  L + LF P + + I   P+  N   D++VW       Y+VKS Y 
Sbjct: 719  VCELIEEGTGGWNEWLLEELFTPMESEIILKIPLSLNGGEDRLVWHFDNKGCYNVKSGYF 778

Query: 471  KALSDDVLQDQPEGSNSMRDSNFLWKKAWKLHIKGKVKMFLWKCLHGIVPVQGQLVRRGI 650
                 D L  +  GS+S    + LW K W+  +  KV+M  W+ + G +P +  LV++ +
Sbjct: 779  VGRLLDGLNRKASGSDSDVQWSRLWCKLWRTQVPPKVRMHAWRLVKGTLPSRAALVKKQV 838

Query: 651  QV-DTICKWYGEDDKSVEHLLFTCERAIKVWKLAQIWWSEISNPTCPVDNWWGNLCRGTW 827
            Q+ D  C +   + +   HL   CE     W+   +     ++P+  V+ W+       W
Sbjct: 839  QLPDVNCVFCSTNVEDSLHLFKNCEALQPFWQQGMVQIHPRTHPSISVEVWF-------W 891

Query: 828  DQVFQ---DPVQLSTYILWWLWKTRNTCAFEGKF---TSARDTVSFAWKEWNEYESRS 983
            D V     + ++     LW +W  RN   + G+F   T+  D  S    E+     RS
Sbjct: 892  DMVEMLSGEKLEGFLMALWVIWVERNNMVWRGQFYNITNMMDWSSSLLLEYKHCHQRS 949



 Score = 70.9 bits (172), Expect(2) = 1e-31
 Identities = 31/80 (38%), Positives = 50/80 (62%)
 Frame = +1

Query: 7   FNDALLAKQLWRVLVHPNRLPS*VLRARYCPKGGVLNTCAKPTDSFIWKSIINAK*VLKQ 186
           FN ALLAKQ WR+L  P  L + VL+ +Y P   ++        S+ W+S++  K +L+Q
Sbjct: 619 FNKALLAKQGWRMLCRPQSLLAQVLKMKYFPTSSLIQAEVGKRISYSWRSLMRGKELLQQ 678

Query: 187 GLYFAIGDGKSTRIWEHPWI 246
           GL F +G+G++  +W+ PW+
Sbjct: 679 GLRFQVGNGENIHLWDDPWL 698


>gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [Prunus persica]
          Length = 1060

 Score =  102 bits (254), Expect(2) = 1e-31
 Identities = 71/232 (30%), Positives = 103/232 (44%), Gaps = 6/232 (2%)
 Frame = +3

Query: 294  VCELLKDQGKNWNFELNDRLFLPHKVQAIHDTPI*TNWDRDKVVWTLTKDQVYSVKSAYK 473
            VC+L    G+ WN  L   +F   +V AI   P+ +    D ++W   ++ +YSVKS Y+
Sbjct: 663  VCDLFTSSGQ-WNVPLLKDIFWDQEVDAILQIPLASLAGHDCLIWHYERNGMYSVKSGYR 721

Query: 474  --ALSDDVLQDQPEGSNSMRDSNFLWKKAWKLHIKGKVKMFLWKCLHGIVPVQGQLVRRG 647
               L  D +  +P     +      WKK W L I  K+K FLW+C    +P    L  R 
Sbjct: 722  LAGLEKDKMSGEPSARVDLNSK--FWKKIWALKIPNKIKFFLWRCAWDFLPCGQILFNRK 779

Query: 648  IQVDTICKWYGEDDKSVEHLLFTCERAIKVWKLAQIWWSEISNPTCPVDNWWGNLCRGTW 827
            I    IC       +SV H ++ CE A +VW+ +   W  +    C V  W  N  R  W
Sbjct: 780  IAPTPICPKCHRKAESVLHAVWLCEAAKEVWRNSA--WGNV----CEV--WRVNSFRELW 831

Query: 828  DQV----FQDPVQLSTYILWWLWKTRNTCAFEGKFTSARDTVSFAWKEWNEY 971
              +      +   L  Y+ W LW  RN+  FEGK  +A   +S   K   E+
Sbjct: 832  HALQLSSSGEEQGLFAYLCWGLWNRRNSFIFEGKSETAIQLLSRMTKLAQEF 883



 Score = 62.8 bits (151), Expect(2) = 1e-31
 Identities = 32/80 (40%), Positives = 45/80 (56%)
 Frame = +1

Query: 7   FNDALLAKQLWRVLVHPNRLPS*VLRARYCPKGGVLNTCAKPTDSFIWKSIINAK*VLKQ 186
           FN ALLAKQ WR+L  P  L + + RARY P    L        SFIW+S+   K +L +
Sbjct: 564 FNQALLAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGTNPSFIWRSLQWGKELLNK 623

Query: 187 GLYFAIGDGKSTRIWEHPWI 246
           GL + +G G S +++   W+
Sbjct: 624 GLRWRVGSGVSIQVYTDKWL 643


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 95.1 bits (235), Expect(2) = 2e-31
 Identities = 64/206 (31%), Positives = 97/206 (47%)
 Frame = +3

Query: 294  VCELLKDQGKNWNFELNDRLFLPHKVQAIHDTPI*TNWDRDKVVWTLTKDQVYSVKSAYK 473
            V +L+  + K WN EL +R F     Q I   P+ T   +D++ W  +KD  YSVK+AY 
Sbjct: 966  VGDLMDVERKEWNVELIERHFNERDQQCILAIPLSTRCLQDELTWAYSKDGTYSVKTAYM 1025

Query: 474  ALSDDVLQDQPEGSNSMRDSNFLWKKAWKLHIKGKVKMFLWKCLHGIVPVQGQLVRRGIQ 653
                       +G N + D + +W   W L++  KV+ FLW+     +PV+  L RR + 
Sbjct: 1026 L---------GKGGN-LDDFHRVWNILWSLNVSPKVRHFLWRACTSSLPVRKVLQRRHLI 1075

Query: 654  VDTICKWYGEDDKSVEHLLFTCERAIKVWKLAQIWWSEISNPTCPVDNWWGNLCRGTWDQ 833
             +  C     +D++  HL + C  ++K+W   +   S I  P    +     L R  W Q
Sbjct: 1076 DEAGCPCCAREDETQFHLFYRCPMSLKLW---EELGSYILLPGIEDEAMCDTLVR--WSQ 1130

Query: 834  VFQDPVQLSTYILWWLWKTRNTCAFE 911
            +    VQ   YILW +W  RN   FE
Sbjct: 1131 MDAKVVQKGCYILWNVWVERNRRVFE 1156



 Score = 68.9 bits (167), Expect(2) = 2e-31
 Identities = 34/80 (42%), Positives = 48/80 (60%)
 Frame = +1

Query: 7    FNDALLAKQLWRVLVHPNRLPS*VLRARYCPKGGVLNTCAKPTDSFIWKSIINAK*VLKQ 186
            FNDALL KQ+WR+L +   L S V+ A+Y P G V       + S+ W+SI  AK ++ +
Sbjct: 868  FNDALLGKQVWRLLHNKESLLSRVMSAKYYPHGDVRYARLGYSHSYSWRSIWGAKSLVLE 927

Query: 187  GLYFAIGDGKSTRIWEHPWI 246
            GL + +GDG    IW  PW+
Sbjct: 928  GLIWRVGDGTKIDIWSAPWV 947


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 95.5 bits (236), Expect(2) = 2e-31
 Identities = 73/240 (30%), Positives = 104/240 (43%), Gaps = 5/240 (2%)
 Frame = +3

Query: 294  VCELLKDQGKNWNFELNDRLFLPHKVQAIHDTPI*TNWDRDKVVWTLTKDQVYSVKSAYK 473
            V  L+  +   WN +L   LF P  V  I   PI      D + W  TK   Y+VKS Y 
Sbjct: 745  VKSLIDSRSNFWNIDLLKELFDPEDVPLISALPIGNPNMEDTLGWHFTKAGNYTVKSGYH 804

Query: 474  ALSDDVLQDQPEGSNSMR-DSNFLWKKAWKLHIKGKVKMFLWKCLHGIVPVQGQLVRRGI 650
                D+     EG+  +  D   L    WK+    K++ FLW+ L G VPV   L +RGI
Sbjct: 805  TARLDL----NEGTTLIGPDLTTLKAYIWKVQCPPKLRHFLWQILSGCVPVSENLRKRGI 860

Query: 651  QVDTICKWYGEDDKSVEHLLFTCERAIKVWKLAQIWWSEISNPTC----PVDNWWGNLCR 818
              D  C   G  ++S+ H LF C  A ++W L+QI       PT     P ++ + NL  
Sbjct: 861  LCDKGCVSCGASEESINHTLFQCHPARQIWALSQI-------PTAPGIFPSNSIFTNLDH 913

Query: 819  GTWDQVFQDPVQLSTYILWWLWKTRNTCAFEGKFTSARDTVSFAWKEWNEYESRS*KLMS 998
              W            +I+W++WK RN   FE       + +  A KE   ++    +L S
Sbjct: 914  LFWRIPSGVDSAPYPWIIWYIWKARNEKVFENVDKDPMEILLLAVKEAQSWQEAQVELHS 973



 Score = 68.6 bits (166), Expect(2) = 2e-31
 Identities = 32/80 (40%), Positives = 50/80 (62%)
 Frame = +1

Query: 7   FNDALLAKQLWRVLVHPNRLPS*VLRARYCPKGGVLNTCAKPTDSFIWKSIINAK*VLKQ 186
           FN ALLAKQLWR++  P+ L + V + RY  K   L++    + S+ W+S+I+A+ ++ +
Sbjct: 645 FNSALLAKQLWRLITAPDSLFAKVFKGRYFRKSNPLDSIKSYSPSYGWRSMISARSLVYK 704

Query: 187 GLYFAIGDGKSTRIWEHPWI 246
           GL   +G G S  +W  PWI
Sbjct: 705 GLIKRVGSGASISVWNDPWI 724


>gb|AAF18538.1|AC006551_24 Very similar to retrotransposon reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score = 92.4 bits (228), Expect(2) = 1e-30
 Identities = 64/223 (28%), Positives = 106/223 (47%), Gaps = 7/223 (3%)
 Frame = +3

Query: 294  VCELLKDQGKNWNFELNDRLFLPHKVQAIHDTPI*TNWDRDKVVWTLTKDQVYSVKSAYK 473
            V +L+  + ++W  +  +  F P  V  I +     + D D  +W   K   YSVK  Y 
Sbjct: 809  VSDLIDYEKRDWRLDKLEEQFFPDDVVKIRENRPVVSLD-DFWIWKHNKSGDYSVKLGYW 867

Query: 474  ALSDDVLQDQPEGSNSMRDSNFLWKKAWKLHIKGKVKMFLWKCLHGIVPVQGQLVRRGIQ 653
              S+  L      +      N L  + WKL  + K+K+FLWK L G +PV   L  RG++
Sbjct: 868  LASNQNLGQVAIEAMMQPSLNDLKTQVWKLQTEPKIKVFLWKVLSGAIPVVDLLSYRGMK 927

Query: 654  VDTICKWYGEDDKSVEHLLFTCERAIKVWKLAQI----WWSEISNPTCPVDNWWGNLCRG 821
            +D+ C+  G + +S++H+LF+C    +VW ++ I       E  +    + ++  N    
Sbjct: 928  LDSRCQTCGCEGESIQHVLFSCSFPRQVWAMSNIHVPLLGFECGSVYANLYHFLINRDNL 987

Query: 822  TWDQVFQDPVQLS---TYILWWLWKTRNTCAFEGKFTSARDTV 941
             W      PV+L     +I+W +WK RN   FEGK  +  +T+
Sbjct: 988  KW------PVELRRSFPWIIWRIWKNRNLFFFEGKRFTVLETI 1024



 Score = 68.9 bits (167), Expect(2) = 1e-30
 Identities = 34/82 (41%), Positives = 53/82 (64%)
 Frame = +1

Query: 1   GHFNDALLAKQLWRVLVHPNRLPS*VLRARYCPKGGVLNTCAKPTDSFIWKSIINAK*VL 180
           G FN ALLAKQ WR+L  P+ L + ++++RY P G  L++      SF W+SI++ + +L
Sbjct: 707 GLFNQALLAKQAWRLLQFPDCLFARLIKSRYFPVGEFLDSDVGSRPSFGWRSILHGRDLL 766

Query: 181 KQGLYFAIGDGKSTRIWEHPWI 246
            +GL   +G+GKS R+W   W+
Sbjct: 767 CRGLVKRVGNGKSIRVWIDYWL 788


>ref|NP_194638.1| ribonuclease H-like protein [Arabidopsis thaliana]
           gi|4972055|emb|CAB43923.1| putative protein [Arabidopsis
           thaliana] gi|7269807|emb|CAB79667.1| putative protein
           [Arabidopsis thaliana] gi|67633766|gb|AAY78807.1|
           putative reverse transcriptase/RNA-dependent DNA
           polymerase [Arabidopsis thaliana]
           gi|332660185|gb|AEE85585.1| ribonuclease H-like protein
           [Arabidopsis thaliana]
          Length = 575

 Score = 91.7 bits (226), Expect(2) = 2e-30
 Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 3/233 (1%)
 Frame = +3

Query: 294 VCELLKDQGKNWNFELNDRLFLPHKVQAIHDTPI*TNWDRDKVVWTLTKDQVYSVKSAYK 473
           V +L+ + G+ W  ++ + LF   + + I +         D   W  T    Y+VKS Y 
Sbjct: 171 VSDLIDESGREWRKDVIEMLFPEVERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGYW 230

Query: 474 ALSDDVLQDQPEGSNSMRDSNFLWKKAWKLHIKGKVKMFLWKCLHGIVPVQGQLVRRGIQ 653
            L+  + +       S    N +++K WK     K++ FLWKCL   +PV G L  R + 
Sbjct: 231 VLTQIINKRSSPQEVSEPSLNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLS 290

Query: 654 VDTICKWYGEDDKSVEHLLFTCERAIKVWKLAQI---WWSEISNPTCPVDNWWGNLCRGT 824
            ++ C       ++V HLLF C  A   W ++ I      E ++       W  NL  G 
Sbjct: 291 KESACIRCPSCKETVNHLLFKCTFARLTWAISSIPIPLGGEWADSIYVNLYWVFNL--GN 348

Query: 825 WDQVFQDPVQLSTYILWWLWKTRNTCAFEGKFTSARDTVSFAWKEWNEYESRS 983
            +  ++   QL  ++LW LWK RN   F G+  +A++ +  A  +  E+  R+
Sbjct: 349 GNPQWEKASQLVPWLLWRLWKNRNELVFRGREFNAQEVLRRAEDDLEEWRIRT 401



 Score = 69.3 bits (168), Expect(2) = 2e-30
 Identities = 35/86 (40%), Positives = 49/86 (56%)
 Frame = +1

Query: 7   FNDALLAKQLWRVLVHPNRLPS*VLRARYCPKGGVLNTCAKPTDSFIWKSIINAK*VLKQ 186
           FN ALL KQ+WR+L  P  L + V ++RY  K   LN       SF+WKSI  ++ +L+Q
Sbjct: 64  FNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEILRQ 123

Query: 187 GLYFAIGDGKSTRIWEHPWIRQGCAS 264
           G    +G+G+   IW H W+    AS
Sbjct: 124 GARAVVGNGEDIIIWRHKWLDSKPAS 149


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score = 89.4 bits (220), Expect(2) = 2e-30
 Identities = 61/248 (24%), Positives = 107/248 (43%), Gaps = 8/248 (3%)
 Frame = +3

Query: 261  IDSFGAAKFNSVCELLKDQGKNWNFELNDRLFLPHKVQAIHDTPI*TNWDRDKVVWTLTK 440
            +  + A   + V +LL   G++WN+ L   LF  +  + I          RD+  W  ++
Sbjct: 957  VSQYAANSIHVVKDLLLPDGRDWNWNLVSLLFPDNTQENILALRPGGKETRDRFTWEYSR 1016

Query: 441  DQVYSVKSAYKALSDDVLQDQPEGSNSMRDSNFLWKKAWKLHIKGKVKMFLWKCLHGIVP 620
               YSVKS Y  +++ + Q            + ++++ WKL +  K+  FLW+C++  + 
Sbjct: 1017 SGHYSVKSGYWVMTEIINQRNNPQEVLQPSLDPIFQQIWKLDVPPKIHHFLWRCVNNCLS 1076

Query: 621  VQGQLVRRGIQVDTICKWYGEDDKSVEHLLFTCERAIKVWKLAQIWWSEISNPTCPVDNW 800
            V   L  R +  +  C       ++V HLLF C  A   W ++ +       P  P   W
Sbjct: 1077 VASNLAYRHLAREKSCVRCPSHGETVNHLLFKCPFARLTWAISPL-------PAPPGGEW 1129

Query: 801  WGNLCRGTWDQVF--------QDPVQLSTYILWWLWKTRNTCAFEGKFTSARDTVSFAWK 956
              +L R     +          D   L  +ILW LWK RN   F+G+  +A   +  A +
Sbjct: 1130 AESLFRNMHHVLSVHKSQPEESDHHALIPWILWRLWKNRNDLVFKGREFTAPQVILKATE 1189

Query: 957  EWNEYESR 980
            + + + +R
Sbjct: 1190 DMDAWNNR 1197



 Score = 71.2 bits (173), Expect(2) = 2e-30
 Identities = 34/80 (42%), Positives = 48/80 (60%)
 Frame = +1

Query: 7    FNDALLAKQLWRVLVHPNRLPS*VLRARYCPKGGVLNTCAKPTDSFIWKSIINAK*VLKQ 186
            FN ALL KQLWR++   + L + V ++RY  K   LN       SF WKSI  A+ ++KQ
Sbjct: 861  FNIALLGKQLWRMITEKDSLMAKVFKSRYFSKSDPLNAPLGSRPSFAWKSIYEAQVLIKQ 920

Query: 187  GLYFAIGDGKSTRIWEHPWI 246
            G+   IG+G++  +W  PWI
Sbjct: 921  GIRAVIGNGETINVWTDPWI 940


>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) - Arabidopsis
            thaliana retrotransposon Ta11-1 gi|976278|gb|AAA75254.1|
            reverse transcriptase [Arabidopsis thaliana]
          Length = 1333

 Score = 89.4 bits (220), Expect(2) = 5e-30
 Identities = 58/195 (29%), Positives = 92/195 (47%), Gaps = 1/195 (0%)
 Frame = +3

Query: 345  DRLFLPHKVQAIHDTPI*TNWDRDKVVWTLTKDQVYSVKSAYKALSDDVLQDQPEGSNSM 524
            + LF P  ++ I       + D D  VW  +K   YSVKS Y         +    +   
Sbjct: 980  EELFYPADIEIIVKRNPVVSMD-DFWVWLHSKSGEYSVKSGYWLAFQTNKPELIREARVQ 1038

Query: 525  RDSNFLWKKAWKLHIKGKVKMFLWKCLHGIVPVQGQLVRRGIQVDTICKWYGEDDKSVEH 704
              +N L +K W      K+K+FLW+ L   +PV  Q++RRG+ +D  C+  GE+ +S+ H
Sbjct: 1039 PSTNGLKEKIWSTLTSPKIKLFLWRILSSALPVAYQIIRRGMPIDPRCQVCGEEGESINH 1098

Query: 705  LLFTCERAIKVWKLAQIWWSEISNPTCPVDNWWGNLCRGTWDQVFQDPVQLS-TYILWWL 881
            +LFTC  A +VW L+ +  S+       +      L       +  + ++ S  ++LW L
Sbjct: 1099 VLFTCSLARQVWALSGVPTSQFGFQNSSIFANIQYLLELKGKGLIPEQIKKSWPWVLWRL 1158

Query: 882  WKTRNTCAFEGKFTS 926
            WK R+   FEG   S
Sbjct: 1159 WKNRDKLFFEGTIFS 1173



 Score = 70.1 bits (170), Expect(2) = 5e-30
 Identities = 34/88 (38%), Positives = 51/88 (57%)
 Frame = +1

Query: 7    FNDALLAKQLWRVLVHPNRLPS*VLRARYCPKGGVLNTCAKPTDSFIWKSIINAK*VLKQ 186
            FN ALLAKQ WR+L  PN L +   ++RY  +   L+   K T S+ W+SI++ + +L +
Sbjct: 863  FNQALLAKQAWRLLQFPNSLFARFFKSRYYDEEDFLDAELKATPSYAWRSILHGRDLLIK 922

Query: 187  GLYFAIGDGKSTRIWEHPWIRQGCASIP 270
            G    +G+G ST +W  PWI      +P
Sbjct: 923  GFRKKVGNGSSTSVWMDPWIYDNDPRLP 950


>gb|AAD32950.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 773

 Score = 89.7 bits (221), Expect(2) = 7e-30
 Identities = 75/254 (29%), Positives = 108/254 (42%), Gaps = 21/254 (8%)
 Frame = +3

Query: 327  WNFELNDRLF----LPHKVQAIHDTPI*TNWDRDKVVWTLTKDQVYSVKSAYKALSDDVL 494
            WN +L  +L     +PH ++AI  +    N   D + W  T D  YSVKS Y  L   + 
Sbjct: 425  WNEDLLCKLIHQNDIPH-IRAIRPSITGAN---DAITWIYTHDGNYSVKSGYHLLRK-LS 479

Query: 495  QDQPEGSNSMRD--SNFLWKKAWKLHIKGKVKMFLWKCLHGIVPVQGQLVRRGIQVDTIC 668
            Q Q     S  +  +  ++   WK +   K+K F W+  H  +P  G L RR +  D  C
Sbjct: 480  QQQHASLPSPNEVSAQTVFTNIWKQNAPPKIKHFWWRSAHNALPTAGNLKRRRLITDDTC 539

Query: 669  KWYGEDDKSVEHLLFTCERAIKVWKLAQIWWSEISNPTCPVDNWWGNLCRGTWD------ 830
            +  GE  + V HLLF C  + ++W+ A I         CP D+   N      +      
Sbjct: 540  QRCGEASEDVNHLLFQCRVSKEIWEQAHI-------KLCPGDSLMSNSFNQNLESIQKLN 592

Query: 831  QVFQDPVQLSTYILWWLWKTRNTCAFEGKFTSARDTVSFA------WKE---WNEYESRS 983
            Q  +  V L  +I W +WK RN   F  K  S  D++  A      WKE    NE + R 
Sbjct: 593  QSARKDVSLFPFIGWRIWKMRNDLIFNNKRWSIPDSIQKALIDQQQWKESLNCNEQQQRK 652

Query: 984  *KLMSGKGTL*ECY 1025
             +L        +CY
Sbjct: 653  PQLHDSHNN--KCY 664



 Score = 69.3 bits (168), Expect(2) = 7e-30
 Identities = 35/95 (36%), Positives = 55/95 (57%)
 Frame = +1

Query: 7   FNDALLAKQLWRVLVHPNRLPS*VLRARYCPKGGVLNTCAKPTDSFIWKSIINAK*VLKQ 186
           FN ALLAKQ WR+L  P  L + V +A+Y PK  +L+  A    S+ WKSI++   ++ +
Sbjct: 316 FNIALLAKQSWRILQQPFSLMARVFKAKYFPKERLLDAKATSQSSYAWKSILHGTKLISR 375

Query: 187 GLYFAIGDGKSTRIWEHPWIRQGCASIPSGQPNSI 291
           GL +  G+G + ++W+  W+       P G  +SI
Sbjct: 376 GLKYIAGNGNNIQLWKDNWLPLNPPRPPVGTCDSI 410


>gb|AAD24601.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1319

 Score = 99.8 bits (247), Expect(2) = 9e-30
 Identities = 70/235 (29%), Positives = 113/235 (48%), Gaps = 11/235 (4%)
 Frame = +3

Query: 294  VCELLKDQGKNWNFELNDRLFLPHKVQAI-HDTPI*TNWDRDKVVWTLTKDQVYSVKSAY 470
            V  L+    +NWN +    LF    VQ I H  P+ ++   D   W  T + +Y+VKS Y
Sbjct: 913  VSHLIDPLTRNWNLKKLTELFHEKDVQLIMHQRPLISS--EDSYCWAGTNNGLYTVKSGY 970

Query: 471  KALSDDVLQDQPEGSNSMRDSNFLWKKAWKLHIKGKVKMFLWKCLHGIVPVQGQLVRRGI 650
            +  S +  ++  + ++     N L+ K W L    K+K+F+WK L G + V+ +L  RGI
Sbjct: 971  ERSSRETFKNLFKEADVYPSVNPLFDKVWSLETVPKIKVFMWKALKGALAVEDRLRSRGI 1030

Query: 651  QVDTICKWYGEDDKSVEHLLFTCERAIKVWKLAQI-------WWSEISNPTCPVDNWWGN 809
            +    C +  E+ +++ HLLF C  A +VW L+ I         S  SN    + N    
Sbjct: 1031 RTADGCLFCKEEIETINHLLFQCPFARQVWALSLIQAPATGFGTSIFSNINHVIQN---- 1086

Query: 810  LCRGTWDQVFQDPVQLST---YILWWLWKTRNTCAFEGKFTSARDTVSFAWKEWN 965
                   Q F  P  + T   ++LW +WK RN   F+G   ++ + V+ A++E N
Sbjct: 1087 ------SQNFGIPRHMRTVSPWLLWEIWKNRNKTLFQGTGLTSSEIVAKAYEECN 1135



 Score = 58.9 bits (141), Expect(2) = 9e-30
 Identities = 30/88 (34%), Positives = 45/88 (51%)
 Frame = +1

Query: 7    FNDALLAKQLWRVLVHPNRLPS*VLRARYCPKGGVLNTCAKPTDSFIWKSIINAK*VLKQ 186
            FN ALLAKQ WR+      + S + ++RY      LN       S+ W+SI+  + +L  
Sbjct: 813  FNQALLAKQAWRLFSDSKSIVSQIFKSRYFMNTDFLNARQGTRPSYTWRSILYGRELLNG 872

Query: 187  GLYFAIGDGKSTRIWEHPWIRQGCASIP 270
            GL   IG+G+ T +W   W+  G +  P
Sbjct: 873  GLKRLIGNGEQTNVWIDKWLFDGHSRRP 900