BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00012218
         (579 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309609.2| pentatricopeptide repeat-containing family p...   154   2e-35
ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containi...   153   4e-35
emb|CBI21003.3| unnamed protein product [Vitis vinifera]              153   4e-35
gb|EXB57399.1| hypothetical protein L484_016452 [Morus notabilis]     149   7e-34
ref|XP_004514126.1| PREDICTED: pentatricopeptide repeat-containi...   141   1e-31
ref|XP_006450492.1| hypothetical protein CICLE_v10010816mg [Citr...   140   3e-31
ref|XP_004245400.1| PREDICTED: pentatricopeptide repeat-containi...   135   6e-30
gb|EOY31434.1| Pentatricopeptide repeat superfamily protein, put...   135   8e-30
ref|XP_006364273.1| PREDICTED: pentatricopeptide repeat-containi...   131   1e-28
gb|EMJ08063.1| hypothetical protein PRUPE_ppa1027201mg, partial ...   129   5e-28
ref|XP_002515553.1| pentatricopeptide repeat-containing protein,...   124   1e-26
ref|XP_003607325.1| Pentatricopeptide repeat-containing protein ...   122   5e-26
ref|XP_002879788.1| pentatricopeptide repeat-containing protein ...   120   3e-25
gb|ESW08977.1| hypothetical protein PHAVU_009G090400g [Phaseolus...   120   3e-25
ref|XP_006293664.1| hypothetical protein CARUB_v10022620mg [Caps...   120   3e-25
ref|NP_181456.1| pentatricopeptide repeat protein LOJ [Arabidops...   119   7e-25
ref|XP_006403509.1| hypothetical protein EUTSA_v10010921mg [Eutr...   113   3e-23
ref|XP_006411149.1| hypothetical protein EUTSA_v10017602mg [Eutr...   110   3e-22
ref|XP_002876279.1| pentatricopeptide repeat-containing protein ...   107   2e-21
ref|XP_006290588.1| hypothetical protein CARUB_v10016679mg [Caps...   105   8e-21

>ref|XP_002309609.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550337148|gb|EEE93132.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 841

 Score =  154 bits (389), Expect = 2e-35
 Identities = 78/185 (42%), Positives = 110/185 (59%)
 Frame = -2

Query: 557 LPNSDSIEANPTSEPQTSIKIPTCQTPISENTRLSQAFVVDPLLSHINNPSSALEYFNWV 378
           LPN    E   +  P  +   P    P S+++ L+Q   +D LL+H N+P SAL YF W 
Sbjct: 29  LPNIPISETPLSQNPHPNTNFPGKSAPTSQDSFLTQTQYIDTLLNHQNDPQSALSYFTWA 88

Query: 377 EKQRGFVREIGDSFFVLIHILVSSRNHHGSVRNLLNNYLSSDFAPSGAVLVDRLINCSDK 198
            ++RG ++ + D+  VL+HIL  S    G  RNLLN + S D+ P  +V+V RLI  S +
Sbjct: 89  SQKRGLIKSV-DALCVLLHILTKSTETCGKARNLLNRFASDDWGPVPSVVVSRLIESSRR 147

Query: 197 FGFGLKPPVFNYSLNGYVKARRYRDAEECFNALVSRGIKPCVRILNHFLNSLVKENMIDE 18
             F     VFNY LN YVK +R  DA +CFN+L+ + I PC+ ++N FL+ LVK NMI E
Sbjct: 148 LDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIRE 207

Query: 17  ARGLF 3
           AR ++
Sbjct: 208 ARDVY 212


>ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  153 bits (386), Expect = 4e-35
 Identities = 80/165 (48%), Positives = 105/165 (63%)
 Frame = -2

Query: 497 IPTCQTPISENTRLSQAFVVDPLLSHINNPSSALEYFNWVEKQRGFVREIGDSFFVLIHI 318
           +PT Q    E T LSQ  V+D LL H+N+P SAL YF   E QRGF+R + D++ VL+HI
Sbjct: 86  VPTSQIH-QETTPLSQNHVIDALLCHVNDPQSALRYFKRAETQRGFIRGV-DAYCVLLHI 143

Query: 317 LVSSRNHHGSVRNLLNNYLSSDFAPSGAVLVDRLINCSDKFGFGLKPPVFNYSLNGYVKA 138
           L+ S   HG  R LLN Y+S D  PS  V VD LINC+ +F F L   VFNY LN Y++A
Sbjct: 144 LMRSPETHGHARKLLNRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRA 203

Query: 137 RRYRDAEECFNALVSRGIKPCVRILNHFLNSLVKENMIDEARGLF 3
            R  +A +CFNA++ + + P V  +N  L +LV+ NMI E R L+
Sbjct: 204 NRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLY 248


>emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  153 bits (386), Expect = 4e-35
 Identities = 80/165 (48%), Positives = 105/165 (63%)
 Frame = -2

Query: 497 IPTCQTPISENTRLSQAFVVDPLLSHINNPSSALEYFNWVEKQRGFVREIGDSFFVLIHI 318
           +PT Q    E T LSQ  V+D LL H+N+P SAL YF   E QRGF+R + D++ VL+HI
Sbjct: 46  VPTSQIH-QETTPLSQNHVIDALLCHVNDPQSALRYFKRAETQRGFIRGV-DAYCVLLHI 103

Query: 317 LVSSRNHHGSVRNLLNNYLSSDFAPSGAVLVDRLINCSDKFGFGLKPPVFNYSLNGYVKA 138
           L+ S   HG  R LLN Y+S D  PS  V VD LINC+ +F F L   VFNY LN Y++A
Sbjct: 104 LMRSPETHGHARKLLNRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRA 163

Query: 137 RRYRDAEECFNALVSRGIKPCVRILNHFLNSLVKENMIDEARGLF 3
            R  +A +CFNA++ + + P V  +N  L +LV+ NMI E R L+
Sbjct: 164 NRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLY 208


>gb|EXB57399.1| hypothetical protein L484_016452 [Morus notabilis]
          Length = 907

 Score =  149 bits (375), Expect = 7e-34
 Identities = 78/187 (41%), Positives = 113/187 (60%)
 Frame = -2

Query: 566 SIPLPNSDSIEANPTSEPQTSIKIPTCQTPISENTRLSQAFVVDPLLSHINNPSSALEYF 387
           S+   + D   +   S  + + ++   +   S +T L+QA V++ LLSH N+P SAL+YF
Sbjct: 48  SLATKSLDEFTSESNSAEKPTSEVDPNRNLCSLSTDLTQAHVINTLLSHKNDPYSALKYF 107

Query: 386 NWVEKQRGFVREIGDSFFVLIHILVSSRNHHGSVRNLLNNYLSSDFAPSGAVLVDRLINC 207
            W E+ RGF+R + DSF VL+HIL+ S+  HGS ++LL+ Y+S D  PS  V VD L +C
Sbjct: 108 KWAERMRGFIRGV-DSFSVLLHILMGSQETHGSAQSLLSLYVSGDSGPSANVFVDHLFDC 166

Query: 206 SDKFGFGLKPPVFNYSLNGYVKARRYRDAEECFNALVSRGIKPCVRILNHFLNSLVKENM 27
           + +F F     +FNY LN Y++A R RDA  CFN +V   I P V  +N  L +L++ NM
Sbjct: 167 AKRFEFEPDSRIFNYLLNSYIRANRIRDAVHCFNKMVEHDILPWVPFMNILLTALIRRNM 226

Query: 26  IDEARGL 6
             EA  L
Sbjct: 227 SREALDL 233


>ref|XP_004514126.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cicer arietinum]
          Length = 850

 Score =  141 bits (356), Expect = 1e-31
 Identities = 81/189 (42%), Positives = 113/189 (59%)
 Frame = -2

Query: 569 TSIPLPNSDSIEANPTSEPQTSIKIPTCQTPISENTRLSQAFVVDPLLSHINNPSSALEY 390
           +SIP  N        T+ P   I  P     I  +T  SQ  ++D LL+H +NP SAL++
Sbjct: 38  SSIPPNNLRPFSQLSTNFPDKIISTPNFPEKII-STSNSQNQILDTLLTHKSNPKSALKF 96

Query: 389 FNWVEKQRGFVREIGDSFFVLIHILVSSRNHHGSVRNLLNNYLSSDFAPSGAVLVDRLIN 210
           F  VE++RGFV+ + D F +L+ IL S+   H S+RNLLNNY+  D +PS  VLV+ L+ 
Sbjct: 97  FKGVERKRGFVKTV-DVFSLLLQILSSTPQTHSSLRNLLNNYVFGDSSPSPKVLVEHLLE 155

Query: 209 CSDKFGFGLKPPVFNYSLNGYVKARRYRDAEECFNALVSRGIKPCVRILNHFLNSLVKEN 30
           CS ++GF     VFNY LN YV+A +  DA ECF  L+   + P V I+N  L ++V+ N
Sbjct: 156 CSGRYGFESDSRVFNYLLNSYVRANKIVDAVECFRTLLEHDVIPWVPIMNILLTAMVRRN 215

Query: 29  MIDEARGLF 3
           MI  AR L+
Sbjct: 216 MICNARQLY 224


>ref|XP_006450492.1| hypothetical protein CICLE_v10010816mg [Citrus clementina]
           gi|568859583|ref|XP_006483317.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Citrus sinensis]
           gi|557553718|gb|ESR63732.1| hypothetical protein
           CICLE_v10010816mg [Citrus clementina]
          Length = 850

 Score =  140 bits (352), Expect = 3e-31
 Identities = 82/211 (38%), Positives = 117/211 (55%), Gaps = 25/211 (11%)
 Frame = -2

Query: 560 PLPNSDSIEANPTSEPQTSIKIPTCQTPISEN-------------------------TRL 456
           P  N+ SI     S+PQ+S K  + ++P+SEN                         T L
Sbjct: 17  PFKNTKSI----CSQPQSSEKPISSESPVSENFPEKITKGSHFSGNPIFPESNTFQPTDL 72

Query: 455 SQAFVVDPLLSHINNPSSALEYFNWVEKQRGFVREIGDSFFVLIHILVSSRNHHGSVRNL 276
           SQ  V+  LLS  N P SA EYF  VE++RGF++ + D+F VL+HIL+  R  H   RNL
Sbjct: 73  SQTSVISSLLSCRNEPVSAFEYFKRVERRRGFLKSL-DTFCVLLHILMKDRESHRYARNL 131

Query: 275 LNNYLSSDFAPSGAVLVDRLINCSDKFGFGLKPPVFNYSLNGYVKARRYRDAEECFNALV 96
           LN+Y+S    P+ A ++D LI  + +F F L   VF+Y L  YV+A R  DA +C N ++
Sbjct: 132 LNHYVSGGSEPTSAAIIDHLIETAKRFDFDLDSGVFSYLLRSYVRADRINDAVDCCNGMI 191

Query: 95  SRGIKPCVRILNHFLNSLVKENMIDEARGLF 3
            R I P +R +N  L +LV+ N+IDEA+  +
Sbjct: 192 ERDIIPLLRSMNSVLKALVRRNLIDEAKEFY 222


>ref|XP_004245400.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Solanum lycopersicum]
          Length = 850

 Score =  135 bits (341), Expect = 6e-30
 Identities = 68/163 (41%), Positives = 96/163 (58%)
 Frame = -2

Query: 491 TCQTPISENTRLSQAFVVDPLLSHINNPSSALEYFNWVEKQRGFVREIGDSFFVLIHILV 312
           +C  P SE+ + ++  VVD LLSH ++P SA  YF     QRGF+    D FFVL+HILV
Sbjct: 57  SCGRPNSEDVKFTKNHVVDVLLSHRDDPDSAYRYFQTARLQRGFLHSKSDPFFVLLHILV 116

Query: 311 SSRNHHGSVRNLLNNYLSSDFAPSGAVLVDRLINCSDKFGFGLKPPVFNYSLNGYVKARR 132
           +S  H    R LL+ Y SSD  PS  V+ + L+ C   F FGL P +FN+ ++  +KA R
Sbjct: 117 NSAMHQHKSRRLLDYYASSDSGPSATVVFNGLVKCGKTFDFGLNPKIFNFLVSSCMKANR 176

Query: 131 YRDAEECFNALVSRGIKPCVRILNHFLNSLVKENMIDEARGLF 3
             DA +CFNA++   I   + I+N  L  LV++ M+  A  L+
Sbjct: 177 LNDAIDCFNAMLEHDIMLWIPIMNSLLKKLVRQGMVGVAEDLY 219


>gb|EOY31434.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao]
          Length = 1159

 Score =  135 bits (340), Expect = 8e-30
 Identities = 72/166 (43%), Positives = 106/166 (63%)
 Frame = -2

Query: 500 KIPTCQTPISENTRLSQAFVVDPLLSHINNPSSALEYFNWVEKQRGFVREIGDSFFVLIH 321
           K P     ++++T L++  V++ LL H NNP SAL+YF +VE +RGFVR I D F VL+H
Sbjct: 367 KDPRLTPSLTQDTSLTRTHVINTLLIHRNNPESALKYFRFVENKRGFVRSI-DVFCVLLH 425

Query: 320 ILVSSRNHHGSVRNLLNNYLSSDFAPSGAVLVDRLINCSDKFGFGLKPPVFNYSLNGYVK 141
           ILV S+  +  V+ LLN +++ D  P+  V +D LI+ + +F F L   VFNY LN YV+
Sbjct: 426 ILVGSQQTNKQVKYLLNRFVAGDSGPTPIVFLDHLIDIAKRFDFELDSRVFNYLLNSYVR 485

Query: 140 ARRYRDAEECFNALVSRGIKPCVRILNHFLNSLVKENMIDEARGLF 3
             R  DA +CFN ++   I P +  +N  L +LV+ N+ID+AR L+
Sbjct: 486 V-RIDDAVDCFNGMIEHDIVPMLPFMNILLTALVRGNLIDKARELY 530


>ref|XP_006364273.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like isoform X1 [Solanum tuberosum]
           gi|565397380|ref|XP_006364274.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like isoform X2 [Solanum tuberosum]
          Length = 854

 Score =  131 bits (329), Expect = 1e-28
 Identities = 65/163 (39%), Positives = 95/163 (58%)
 Frame = -2

Query: 491 TCQTPISENTRLSQAFVVDPLLSHINNPSSALEYFNWVEKQRGFVREIGDSFFVLIHILV 312
           +C  P SE+ + ++  VVD LLSH ++P SA  +F     QRGF+    D FFVL+HILV
Sbjct: 61  SCGGPNSEDGKFTKTHVVDVLLSHRDDPDSAYRHFQTARLQRGFLHSKSDPFFVLLHILV 120

Query: 311 SSRNHHGSVRNLLNNYLSSDFAPSGAVLVDRLINCSDKFGFGLKPPVFNYSLNGYVKARR 132
           +S  H    R LL+ Y SSD  PS  ++ + L+ C   F F L P +FN+ ++  VKA R
Sbjct: 121 NSAMHQHKARRLLDYYASSDSGPSATIIFNGLVKCGKTFDFELNPKIFNFLISSCVKANR 180

Query: 131 YRDAEECFNALVSRGIKPCVRILNHFLNSLVKENMIDEARGLF 3
             DA +CFN ++   I   + I+N  L  LV+++M+  A  L+
Sbjct: 181 LNDAIDCFNGMLEHDIMLWIPIMNRLLKELVRQDMVGVAGDLY 223


>gb|EMJ08063.1| hypothetical protein PRUPE_ppa1027201mg, partial [Prunus persica]
          Length = 782

 Score =  129 bits (324), Expect = 5e-28
 Identities = 66/154 (42%), Positives = 96/154 (62%)
 Frame = -2

Query: 464 TRLSQAFVVDPLLSHINNPSSALEYFNWVEKQRGFVREIGDSFFVLIHILVSSRNHHGSV 285
           + L+Q  V+  LLSH + P+SAL++F W EK+RGF++ + D+F VL+HIL      H   
Sbjct: 1   SELTQTKVISTLLSHRSEPNSALKHFIWAEKERGFLKGV-DAFCVLLHILTGFEETHVRA 59

Query: 284 RNLLNNYLSSDFAPSGAVLVDRLINCSDKFGFGLKPPVFNYSLNGYVKARRYRDAEECFN 105
           + LLN Y S D  PS  V  DRL++C+ +F F L+  VF+Y LN YV+A R + A +CF+
Sbjct: 60  QILLNQYASGDSGPSQQVFFDRLVDCAKRFDFELESRVFSYLLNSYVRANRIKYAIDCFD 119

Query: 104 ALVSRGIKPCVRILNHFLNSLVKENMIDEARGLF 3
            ++   + PCV  +N  L  LV+  MI  AR L+
Sbjct: 120 RMIELELYPCVTCMNILLVELVRRKMIVNARELY 153


>ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545497|gb|EEF47002.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 927

 Score =  124 bits (312), Expect = 1e-26
 Identities = 68/159 (42%), Positives = 95/159 (59%)
 Frame = -2

Query: 479 PISENTRLSQAFVVDPLLSHINNPSSALEYFNWVEKQRGFVREIGDSFFVLIHILVSSRN 300
           P S+++ L++  V+D LLS+  +P SAL YF  +E  RGFVR + DS  VL+HIL  S  
Sbjct: 75  PASQDSVLARTNVIDTLLSYKRDPYSALTYFKQLECTRGFVRSL-DSLCVLLHILTRSSE 133

Query: 299 HHGSVRNLLNNYLSSDFAPSGAVLVDRLINCSDKFGFGLKPPVFNYSLNGYVKARRYRDA 120
                +NLLN ++S D  P   +LVD  I  + +F F     ++NY LN Y+KA +  DA
Sbjct: 134 TLKQAQNLLNRFISGDSGPMPNILVDHFIGSTKRFDFDSDIRIYNYLLNSYIKANKLNDA 193

Query: 119 EECFNALVSRGIKPCVRILNHFLNSLVKENMIDEARGLF 3
             CFN LV   I P ++ LN  L +LVK +MI EAR ++
Sbjct: 194 IGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVY 232


>ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355508380|gb|AES89522.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  122 bits (307), Expect = 5e-26
 Identities = 65/160 (40%), Positives = 100/160 (62%)
 Frame = -2

Query: 482 TPISENTRLSQAFVVDPLLSHINNPSSALEYFNWVEKQRGFVREIGDSFFVLIHILVSSR 303
           +P S+ +     F+V  LLSH +NP SAL++F+ VE++RGFV+ + D   +LIHIL S+ 
Sbjct: 51  SPESQPSEKKNRFLVT-LLSHKSNPKSALKFFHQVERKRGFVKTV-DFISLLIHILSSNS 108

Query: 302 NHHGSVRNLLNNYLSSDFAPSGAVLVDRLINCSDKFGFGLKPPVFNYSLNGYVKARRYRD 123
               S++ LLNNY+  D  PS  V V+ L+ CS ++GF     VFNY L  +V+  +  D
Sbjct: 109 KTCSSLQFLLNNYVFGDATPSAKVFVECLLECSGRYGFESDSRVFNYLLKSFVRVNKITD 168

Query: 122 AEECFNALVSRGIKPCVRILNHFLNSLVKENMIDEARGLF 3
           A ECF  ++   + P V I+N+ L ++V+ NM+ +AR L+
Sbjct: 169 AVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLY 208


>ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325627|gb|EFH56047.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 867

 Score =  120 bits (301), Expect = 3e-25
 Identities = 70/173 (40%), Positives = 102/173 (58%)
 Frame = -2

Query: 521 SEPQTSIKIPTCQTPISENTRLSQAFVVDPLLSHINNPSSALEYFNWVEKQRGFVREIGD 342
           S P  S  I T +T    +  +  A V++ LL   N+P SAL+Y NWV+  R    E GD
Sbjct: 60  SGPNHSPLISTSET----DNHVDDAHVIEVLLGRRNDPVSALQYCNWVKPLRSLC-EGGD 114

Query: 341 SFFVLIHILVSSRNHHGSVRNLLNNYLSSDFAPSGAVLVDRLINCSDKFGFGLKPPVFNY 162
            F+VLIHIL SS + H    NLL  ++SS+     + +V+ L++ S +F F L    FNY
Sbjct: 115 VFWVLIHILFSSPHTHDRASNLLVMFVSSNPTLIPSAMVNNLVDSSKRFDFELSSRAFNY 174

Query: 161 SLNGYVKARRYRDAEECFNALVSRGIKPCVRILNHFLNSLVKENMIDEARGLF 3
            LN Y++ RR   A +CFN +V R + P V  +N+ L+SLV+ N+IDEA+ ++
Sbjct: 175 LLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAKEIY 227


>gb|ESW08977.1| hypothetical protein PHAVU_009G090400g [Phaseolus vulgaris]
          Length = 741

 Score =  120 bits (300), Expect = 3e-25
 Identities = 68/157 (43%), Positives = 96/157 (61%), Gaps = 1/157 (0%)
 Frame = -2

Query: 494 PTCQTPISENTRLSQAFVVDPLLSHINNPSSALEYFNWVEKQRGFVREIGDSFFVLIHIL 315
           P  Q+P S     SQ  V+D LL    +P SAL +F  VE++RGFV+ + D   +L+ IL
Sbjct: 49  PEAQSPESPLIP-SQNEVLDTLLLRKADPISALMFFKQVERKRGFVKTV-DILCLLLQIL 106

Query: 314 VSSRNHHGSVRNLLNNYLSSDFAPSGAVLVDRLINCSDKFGFGLKPP-VFNYSLNGYVKA 138
            SS + HG  + LLNNY+  D AP   VLV+ L+ C++++GF L    VFNY LN YV+A
Sbjct: 107 ASSPDTHGDAKYLLNNYVFGDSAPCAKVLVELLVECAERYGFELSDSRVFNYLLNSYVRA 166

Query: 137 RRYRDAEECFNALVSRGIKPCVRILNHFLNSLVKENM 27
            +  DA ECF  ++  G+ P V I+N  L ++V+ NM
Sbjct: 167 NKITDAVECFRTMLEHGVLPWVPIVNILLTAMVRRNM 203


>ref|XP_006293664.1| hypothetical protein CARUB_v10022620mg [Capsella rubella]
           gi|482562372|gb|EOA26562.1| hypothetical protein
           CARUB_v10022620mg [Capsella rubella]
          Length = 861

 Score =  120 bits (300), Expect = 3e-25
 Identities = 68/170 (40%), Positives = 104/170 (61%), Gaps = 3/170 (1%)
 Frame = -2

Query: 503 IKIPTCQTPISENTR---LSQAFVVDPLLSHINNPSSALEYFNWVEKQRGFVREIGDSFF 333
           + +P+  T  SEN     +  A V++ LL   N+P SAL+Y NWV K    + E GD F+
Sbjct: 65  VHLPSISTLDSENQGGDDVDDARVIEVLLGRRNDPVSALQYCNWV-KPLPHLYEGGDVFW 123

Query: 332 VLIHILVSSRNHHGSVRNLLNNYLSSDFAPSGAVLVDRLINCSDKFGFGLKPPVFNYSLN 153
           VL+HIL SS + H    NLL  ++SS+     +V+V+ L+  ++++GF L    FNY LN
Sbjct: 124 VLVHILFSSPHTHDRASNLLVMFVSSNPTLIPSVIVNYLVESAERYGFELSSRAFNYLLN 183

Query: 152 GYVKARRYRDAEECFNALVSRGIKPCVRILNHFLNSLVKENMIDEARGLF 3
            Y++ RR   A +CFN +V R + P V  +N+ L+SLV+ N+IDEA+ ++
Sbjct: 184 AYIRNRRMDYAVDCFNLMVERNVIPFVPYVNNVLSSLVRSNLIDEAKEIY 233


>ref|NP_181456.1| pentatricopeptide repeat protein LOJ [Arabidopsis thaliana]
           gi|75100007|sp|O80958.1|PP194_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g39230, mitochondrial; AltName: Full=Protein LATERAL
           ORGAN JUNCTION; Flags: Precursor
           gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis
           thaliana] gi|330254554|gb|AEC09648.1| pentatricopeptide
           repeat protein LOJ [Arabidopsis thaliana]
          Length = 867

 Score =  119 bits (297), Expect = 7e-25
 Identities = 73/192 (38%), Positives = 111/192 (57%)
 Frame = -2

Query: 578 EETTSIPLPNSDSIEANPTSEPQTSIKIPTCQTPISENTRLSQAFVVDPLLSHINNPSSA 399
           E  +++  P+  S+   P   P TS       T  +EN  +  A V++ LL   N+P SA
Sbjct: 48  ETISTLEFPHKTSV---PNHSPLTS-------TSETEN-HVDDARVIEVLLGRRNDPVSA 96

Query: 398 LEYFNWVEKQRGFVREIGDSFFVLIHILVSSRNHHGSVRNLLNNYLSSDFAPSGAVLVDR 219
           L+Y NWV+       E GD F+VLIHIL+SS + H    NLL  ++S++      V+V+ 
Sbjct: 97  LQYCNWVKPLHRLC-EGGDVFWVLIHILLSSIHTHDRASNLLVMFVSNNPTLIPNVMVNN 155

Query: 218 LINCSDKFGFGLKPPVFNYSLNGYVKARRYRDAEECFNALVSRGIKPCVRILNHFLNSLV 39
           L++ S +FGF L P  FNY LN Y++ +R   A +CF  +V R + P V  +N+ L+SLV
Sbjct: 156 LVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLV 215

Query: 38  KENMIDEARGLF 3
           + N+IDEA+ ++
Sbjct: 216 RSNLIDEAKEIY 227


>ref|XP_006403509.1| hypothetical protein EUTSA_v10010921mg [Eutrema salsugineum]
           gi|557104628|gb|ESQ44962.1| hypothetical protein
           EUTSA_v10010921mg [Eutrema salsugineum]
          Length = 851

 Score =  113 bits (283), Expect = 3e-23
 Identities = 65/151 (43%), Positives = 92/151 (60%), Gaps = 1/151 (0%)
 Frame = -2

Query: 452 QAFVVDPLLSHINNPSSALEYFNWVEKQRGFVREIGDSFFVLIHILVSSRNHHGSVRNLL 273
           +A V+D LLS  +NP SAL ++NWV   RG   + GD+F+VLIHILV S   +G   +LL
Sbjct: 72  EARVIDVLLSRRDNPESALRFYNWVRPWRGSFED-GDAFWVLIHILVGSPETYGRASDLL 130

Query: 272 NNYLSSDFAPS-GAVLVDRLINCSDKFGFGLKPPVFNYSLNGYVKARRYRDAEECFNALV 96
             Y+SS    +  +VLV  L+  +  FGF +KP  FNY LN Y K R+   A +C N ++
Sbjct: 131 VRYVSSSNPVAMPSVLVSNLMESAKSFGFEVKPRAFNYLLNAYSKDRQTDYAVDCINLMI 190

Query: 95  SRGIKPCVRILNHFLNSLVKENMIDEARGLF 3
             G+   V  +N+ LN+LV+ N I EA+ L+
Sbjct: 191 ELGLALFVPYVNNTLNALVRRNSIYEAKELY 221


>ref|XP_006411149.1| hypothetical protein EUTSA_v10017602mg [Eutrema salsugineum]
           gi|557112318|gb|ESQ52602.1| hypothetical protein
           EUTSA_v10017602mg [Eutrema salsugineum]
          Length = 855

 Score =  110 bits (275), Expect = 3e-22
 Identities = 73/198 (36%), Positives = 112/198 (56%), Gaps = 14/198 (7%)
 Frame = -2

Query: 554 PNSDSIE-ANPTSEPQTSIKIPTCQTPISENTRLSQAF-------------VVDPLLSHI 417
           P++ S++ A+ TSE  + +K P   TP  +   L   F             V++ LL   
Sbjct: 35  PDNWSLDTADSTSETISELKFPNL-TPGPDRLPLVSTFELQNQCDDVDDARVIEVLLGRK 93

Query: 416 NNPSSALEYFNWVEKQRGFVREIGDSFFVLIHILVSSRNHHGSVRNLLNNYLSSDFAPSG 237
           N+P SAL+Y NWV       +   D F+VLIHILVSS   +    NLL  ++SS+   + 
Sbjct: 94  NDPVSALQYCNWVRPLTRICQG-RDVFWVLIHILVSSPQTYDRACNLLVLFVSSNPLLNP 152

Query: 236 AVLVDRLINCSDKFGFGLKPPVFNYSLNGYVKARRYRDAEECFNALVSRGIKPCVRILNH 57
           +V+V++L++ + +FGFGL    FNY LN Y + RR   + ECFN L+ R + P V  +N+
Sbjct: 153 SVVVNQLLDSAQRFGFGLDSRAFNYLLNAYNRNRRTDYSVECFNLLMDRNVIPFVPYVNN 212

Query: 56  FLNSLVKENMIDEARGLF 3
            L+SLV+ N I+EA+ ++
Sbjct: 213 ILSSLVRSNSINEAKEIY 230


>ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297322117|gb|EFH52538.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 850

 Score =  107 bits (268), Expect = 2e-21
 Identities = 66/185 (35%), Positives = 100/185 (54%), Gaps = 9/185 (4%)
 Frame = -2

Query: 530 NPTSEPQTSIKIPTCQTPISENTRL--------SQAFVVDPLLSHINNPSSALEYFNWVE 375
           NP+ E +      + + P++    L          A V+D LL+  NNP +AL ++NW  
Sbjct: 37  NPSQEQRLVCGSTSEENPVTSKVSLLAAKPEQKDDASVIDVLLNRRNNPEAALRFYNWAR 96

Query: 374 KQRGFVREIGDSFFVLIHILVSSRNHHGSVRNLLNNYLS-SDFAPSGAVLVDRLINCSDK 198
             RG   + GD F+VLIHILV+S   +G   +LL  Y+S S+  P  +VLV  L++ +  
Sbjct: 97  PWRGSFED-GDVFWVLIHILVTSPETYGRASDLLIRYVSTSNPTPMASVLVSNLVDSAKL 155

Query: 197 FGFGLKPPVFNYSLNGYVKARRYRDAEECFNALVSRGIKPCVRILNHFLNSLVKENMIDE 18
           FGF +    FNY LN Y K R+   A +  N ++  G+ P V  +N  L++LV+ N I E
Sbjct: 156 FGFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITE 215

Query: 17  ARGLF 3
           A+ L+
Sbjct: 216 AKELY 220


>ref|XP_006290588.1| hypothetical protein CARUB_v10016679mg [Capsella rubella]
           gi|565465250|ref|XP_006290589.1| hypothetical protein
           CARUB_v10016679mg [Capsella rubella]
           gi|482559295|gb|EOA23486.1| hypothetical protein
           CARUB_v10016679mg [Capsella rubella]
           gi|482559296|gb|EOA23487.1| hypothetical protein
           CARUB_v10016679mg [Capsella rubella]
          Length = 862

 Score =  105 bits (262), Expect = 8e-21
 Identities = 58/148 (39%), Positives = 88/148 (59%), Gaps = 1/148 (0%)
 Frame = -2

Query: 443 VVDPLLSHINNPSSALEYFNWVEKQRGFVREIGDSFFVLIHILVSSRNHHGSVRNLLNNY 264
           V+D LL+  NNP SAL ++NW    RG   + GD F+VL+H+LV S   +G  R+LL  Y
Sbjct: 77  VIDVLLNRRNNPESALRFYNWARPWRGSFED-GDVFWVLVHVLVGSPETYGRARDLLMRY 135

Query: 263 LS-SDFAPSGAVLVDRLINCSDKFGFGLKPPVFNYSLNGYVKARRYRDAEECFNALVSRG 87
           +S S+  P  +VLV  L++ +  FGF +    FNY LN Y + R+   A +  N ++  G
Sbjct: 136 VSTSNPTPMPSVLVSNLVDSAKLFGFEVNSRAFNYLLNAYSQKRQTDYAVDIINQMLELG 195

Query: 86  IKPCVRILNHFLNSLVKENMIDEARGLF 3
           + P V  +N  L++LV+ N + EA+ L+
Sbjct: 196 VIPFVPYVNRTLSALVQRNSMTEAKELY 223