BLASTX nr result
ID: Rehmannia25_contig00012181
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00012181
(1214 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 290 1e-75
ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mit... 266 1e-68
ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 265 2e-68
ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citr... 260 7e-67
gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis] 259 1e-66
ref|XP_006487001.1| PREDICTED: RNA pseudouridine synthase 4, mit... 256 1e-65
ref|XP_006486999.1| PREDICTED: RNA pseudouridine synthase 4, mit... 256 1e-65
ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Popu... 256 1e-65
ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [... 256 1e-65
gb|EMJ01009.1| hypothetical protein PRUPE_ppa004969mg [Prunus pe... 255 2e-65
gb|ESW29223.1| hypothetical protein PHAVU_002G053600g [Phaseolus... 251 3e-64
ref|XP_004511295.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 250 7e-64
ref|XP_006573909.1| PREDICTED: RNA pseudouridine synthase 4, mit... 250 9e-64
ref|XP_003516775.1| PREDICTED: RNA pseudouridine synthase 4, mit... 250 9e-64
gb|EMJ01008.1| hypothetical protein PRUPE_ppa004969mg [Prunus pe... 248 3e-63
ref|XP_003635999.1| RNA pseudourine synthase [Medicago truncatul... 247 6e-63
gb|EOX98365.1| Ribosomal pseudouridine synthase, putative [Theob... 244 5e-62
ref|XP_004305959.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 240 7e-61
ref|NP_188575.1| RNA pseudourine synthase 4 [Arabidopsis thalian... 237 6e-60
ref|XP_006297582.1| hypothetical protein CARUB_v10013603mg [Caps... 236 1e-59
>ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial [Vitis
vinifera] gi|296090438|emb|CBI40257.3| unnamed protein
product [Vitis vinifera]
Length = 476
Score = 290 bits (741), Expect = 1e-75
Identities = 145/216 (67%), Positives = 173/216 (80%), Gaps = 5/216 (2%)
Frame = +1
Query: 1 FREKTFGASN-DVPGSDRILQKKYYALVIGSPRRREGLISVPLMKVVVDNGKSERITVVD 177
FREKTFGASN D+ RILQ++Y+ALVIGSPRR GLIS PL KVVVD+GKSERIT+VD
Sbjct: 260 FREKTFGASNNDIDTKKRILQRRYWALVIGSPRRPRGLISAPLGKVVVDDGKSERITIVD 319
Query: 178 NNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ 357
N T+S QH+ TEYRVI SS GYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ
Sbjct: 320 NVQTMSSQHAITEYRVIKSSCHGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ 379
Query: 358 AHKKLGQYFNSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLA 537
AH+K Q F S + D+ ++ K + GL+LE+GSI DKQP LHLHCK+M+LPN+SLA
Sbjct: 380 AHRKWKQLFQSNIEKNLDENLSNRKTHPFGLDLESGSILDKQPHLHLHCKQMVLPNVSLA 439
Query: 538 LQRGRIIS----NQMESIRLDAPLPAHMQRSWDLLN 633
LQ ++ + +++ES+ APLP+HMQRSWD+LN
Sbjct: 440 LQNLQLSAECDLSELESLEFVAPLPSHMQRSWDILN 475
>ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like
[Solanum tuberosum]
Length = 467
Score = 266 bits (681), Expect = 1e-68
Identities = 136/216 (62%), Positives = 163/216 (75%), Gaps = 5/216 (2%)
Frame = +1
Query: 1 FREKTFGASN-DVPGSDRILQKKYYALVIGSPRRREGLISVPLMKVVVDNGKSERITVVD 177
FREKTF + N D+ RILQKKY+ALVIG PRR G+IS PL K+V+DNGKSERIT++
Sbjct: 251 FREKTFDSQNEDLESKKRILQKKYWALVIGCPRRSGGIISAPLGKLVLDNGKSERITIMS 310
Query: 178 NNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ 357
+ S Q++ TEYR+I SS GYTWLELSPLTGRKHQLRVHCAE LGTPIVGDYKYGWQ
Sbjct: 311 DVRAPSAQYAVTEYRIIGSSEKGYTWLELSPLTGRKHQLRVHCAEALGTPIVGDYKYGWQ 370
Query: 358 AHKKLGQYFNSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLA 537
AH+KL S L ++ + K + L L NGSISDKQP LHLHCK+M+LPNISLA
Sbjct: 371 AHRKLKHLPLPTSVLNLGVQIPRQKPDPFNLRLGNGSISDKQPHLHLHCKEMVLPNISLA 430
Query: 538 LQRGRIISN----QMESIRLDAPLPAHMQRSWDLLN 633
LQR +++S+ +ESI+L APLP HMQ+SWD L+
Sbjct: 431 LQRAQVVSDTDLVDVESIKLVAPLPFHMQKSWDCLS 466
>ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Solanum
lycopersicum]
Length = 467
Score = 265 bits (678), Expect = 2e-68
Identities = 136/216 (62%), Positives = 163/216 (75%), Gaps = 5/216 (2%)
Frame = +1
Query: 1 FREKTFGASN-DVPGSDRILQKKYYALVIGSPRRREGLISVPLMKVVVDNGKSERITVVD 177
FREKTF + N D+ RILQKKY+ALVIG PRR G+IS PL K+V+DNGKSERIT++
Sbjct: 251 FREKTFDSQNEDLESKKRILQKKYWALVIGCPRRSGGIISAPLGKLVLDNGKSERITIMS 310
Query: 178 NNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ 357
+ S Q++ TEYR+I SS GYTWLELSPLTGRKHQLRVHCAE LGTPIVGDYKYGWQ
Sbjct: 311 DVREPSAQYAVTEYRIIGSSEKGYTWLELSPLTGRKHQLRVHCAEALGTPIVGDYKYGWQ 370
Query: 358 AHKKLGQYFNSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLA 537
AH+KL S L ++ + K + L L NGSISDKQP LHLHCK+M+LPNISLA
Sbjct: 371 AHRKLKHLPLPTSVLNLVVEIPRQKPDPFNLRLGNGSISDKQPHLHLHCKEMVLPNISLA 430
Query: 538 LQRGRIISN----QMESIRLDAPLPAHMQRSWDLLN 633
LQR +++S+ +ESI+L APLP HMQ+SWD L+
Sbjct: 431 LQRAQVVSDADLVDVESIKLVAPLPFHMQKSWDCLS 466
>ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citrus clementina]
gi|557524859|gb|ESR36165.1| hypothetical protein
CICLE_v10028283mg [Citrus clementina]
Length = 494
Score = 260 bits (665), Expect = 7e-67
Identities = 131/216 (60%), Positives = 166/216 (76%), Gaps = 5/216 (2%)
Frame = +1
Query: 1 FREKTFGASN-DVPGSDRILQKKYYALVIGSPRRREGLISVPLMKVVVDNGKSERITVVD 177
FREKTF AS D RILQ+ Y+ALV+G+PR +G+IS PL KVVVDNGKS+RITVV+
Sbjct: 278 FREKTFSASKEDNDNEKRILQRWYWALVVGTPRCSKGVISAPLRKVVVDNGKSDRITVVN 337
Query: 178 NNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ 357
N+ +S QH+ T Y+VI S GYTWL+LSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ
Sbjct: 338 NDQIMSAQHAVTRYQVIKPSCHGYTWLKLSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ 397
Query: 358 AHKKLGQYFNSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLA 537
H+K Q+ S + +D+ + K GL+LE+GSI +KQP LHLHCK+M LPN+S A
Sbjct: 398 THRKWKQFHPSDLNKDSNDETPKEKTLHFGLDLESGSILEKQPGLHLHCKEMTLPNVSQA 457
Query: 538 LQRGRIIS----NQMESIRLDAPLPAHMQRSWDLLN 633
+Q+ ++ S +++ES++L APLP+HMQRSWD+LN
Sbjct: 458 IQKVQLSSGCDVSKLESLKLVAPLPSHMQRSWDVLN 493
>gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis]
Length = 470
Score = 259 bits (663), Expect = 1e-66
Identities = 133/216 (61%), Positives = 163/216 (75%), Gaps = 5/216 (2%)
Frame = +1
Query: 1 FREKTFGASNDVPGSDRI-LQKKYYALVIGSPRRREGLISVPLMKVVVDNGKSERITVVD 177
FREKTFGASND +I LQ++Y+A VIGSPR GLIS PL KVV+DNGKS+RITVV+
Sbjct: 254 FREKTFGASNDETVKGKIVLQRRYWAFVIGSPRHPNGLISAPLRKVVLDNGKSDRITVVN 313
Query: 178 NNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ 357
+HTLS QH+ T+Y+VI SS GYTWLELSPLTGRKHQLRVHCAEVLGTP+VGDYKYGWQ
Sbjct: 314 GSHTLSSQHAITKYKVIGSSSHGYTWLELSPLTGRKHQLRVHCAEVLGTPMVGDYKYGWQ 373
Query: 358 AHKKLGQYFNSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLA 537
AH+ D K + + + K+ GL ++NGSIS+K P LHLHCK+M+LPNIS
Sbjct: 374 AHRDWKPLHWPDPDNKCIEVLPKRKNLPFGLNMDNGSISEKHPRLHLHCKQMVLPNISHV 433
Query: 538 LQRGRIIS----NQMESIRLDAPLPAHMQRSWDLLN 633
LQ + S +++E ++LDAPLP++MQRSW L N
Sbjct: 434 LQNVQRYSDYELSRLERLKLDAPLPSYMQRSWHLTN 469
>ref|XP_006487001.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
X3 [Citrus sinensis]
Length = 275
Score = 256 bits (654), Expect = 1e-65
Identities = 128/216 (59%), Positives = 166/216 (76%), Gaps = 5/216 (2%)
Frame = +1
Query: 1 FREKTFGASN-DVPGSDRILQKKYYALVIGSPRRREGLISVPLMKVVVDNGKSERITVVD 177
FREKTF AS D +ILQ+ Y+ALV+G+PR +G+IS PL KVVVDNGKS+RITVV+
Sbjct: 59 FREKTFSASKEDNDNEKKILQRWYWALVVGTPRCSKGVISAPLGKVVVDNGKSDRITVVN 118
Query: 178 NNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ 357
N+ +S QH+ T Y+VI S GYTWL+LSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ
Sbjct: 119 NDQIMSAQHAVTRYQVIKPSCHGYTWLKLSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ 178
Query: 358 AHKKLGQYFNSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLA 537
H+K Q+ S ++++ + K GL+LE+GSI +KQP LHLHCK+M LPN+S A
Sbjct: 179 THRKWKQFHPSDLSKDSNEEIPKEKTLHFGLDLESGSILEKQPRLHLHCKEMTLPNVSQA 238
Query: 538 LQRGRIIS----NQMESIRLDAPLPAHMQRSWDLLN 633
+Q+ ++ S +++E+++L APLP+HMQRSWD+LN
Sbjct: 239 IQKVQLSSGCDVSKLETLKLVAPLPSHMQRSWDVLN 274
>ref|XP_006486999.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
X1 [Citrus sinensis] gi|568867349|ref|XP_006487000.1|
PREDICTED: RNA pseudouridine synthase 4,
mitochondrial-like isoform X2 [Citrus sinensis]
Length = 362
Score = 256 bits (654), Expect = 1e-65
Identities = 128/216 (59%), Positives = 166/216 (76%), Gaps = 5/216 (2%)
Frame = +1
Query: 1 FREKTFGASN-DVPGSDRILQKKYYALVIGSPRRREGLISVPLMKVVVDNGKSERITVVD 177
FREKTF AS D +ILQ+ Y+ALV+G+PR +G+IS PL KVVVDNGKS+RITVV+
Sbjct: 146 FREKTFSASKEDNDNEKKILQRWYWALVVGTPRCSKGVISAPLGKVVVDNGKSDRITVVN 205
Query: 178 NNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ 357
N+ +S QH+ T Y+VI S GYTWL+LSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ
Sbjct: 206 NDQIMSAQHAVTRYQVIKPSCHGYTWLKLSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ 265
Query: 358 AHKKLGQYFNSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLA 537
H+K Q+ S ++++ + K GL+LE+GSI +KQP LHLHCK+M LPN+S A
Sbjct: 266 THRKWKQFHPSDLSKDSNEEIPKEKTLHFGLDLESGSILEKQPRLHLHCKEMTLPNVSQA 325
Query: 538 LQRGRIIS----NQMESIRLDAPLPAHMQRSWDLLN 633
+Q+ ++ S +++E+++L APLP+HMQRSWD+LN
Sbjct: 326 IQKVQLSSGCDVSKLETLKLVAPLPSHMQRSWDVLN 361
>ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Populus trichocarpa]
gi|550331407|gb|EEE87831.2| hypothetical protein
POPTR_0009s09860g [Populus trichocarpa]
Length = 471
Score = 256 bits (654), Expect = 1e-65
Identities = 134/215 (62%), Positives = 165/215 (76%), Gaps = 5/215 (2%)
Frame = +1
Query: 1 FREKTFGASNDVPGSDR-ILQKKYYALVIGSPRRREGLISVPLMKVVVDNGKSERITVVD 177
FREKT ASND G+ R ILQ+KY+ALVIGSPRR +GLIS PL KVVVDNGKS+RITVV+
Sbjct: 256 FREKTLAASNDDVGNKRRILQRKYWALVIGSPRRPKGLISAPLGKVVVDNGKSDRITVVE 315
Query: 178 NNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ 357
N+ LS QH+ T+YRVI SS G+TWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKY WQ
Sbjct: 316 NSQNLSSQHAVTQYRVIESS-HGFTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYAWQ 374
Query: 358 AHKKLGQYFNSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLA 537
AH+ Q S + +DK K L+L++GSIS+K P LHLHCK+M+LP++S A
Sbjct: 375 AHRNWKQLQWSNIEDNSNDKSLSEKILPFALDLDSGSISEKHPRLHLHCKQMVLPDVSKA 434
Query: 538 LQRGRIIS----NQMESIRLDAPLPAHMQRSWDLL 630
LQ ++ S +Q+ S++ DAPLP +M++SWD+L
Sbjct: 435 LQDVQLSSDYDFSQLASLKFDAPLPPYMKKSWDIL 469
>ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
gi|223542055|gb|EEF43599.1| ribosomal pseudouridine
synthase, putative [Ricinus communis]
Length = 536
Score = 256 bits (654), Expect = 1e-65
Identities = 133/217 (61%), Positives = 169/217 (77%), Gaps = 6/217 (2%)
Frame = +1
Query: 1 FREKTFGASN-DVPGSDRILQKKYYALVIGSPRRREGLISVPLMKVVVDNGKSERITVVD 177
FREKTF ASN D+ RILQ+KY+ALVIGSPRR++G+IS PL KVVVD+GKS+RITVV+
Sbjct: 321 FREKTFAASNHDIGERRRILQRKYWALVIGSPRRQKGIISAPLGKVVVDDGKSDRITVVE 380
Query: 178 NNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ 357
N + S QH+ T+YRV+ SS GY WLELSP+TGRKHQLRVHCAEVLGTPIVGDYKYGWQ
Sbjct: 381 NAESTSFQHAVTQYRVMESS-HGYAWLELSPITGRKHQLRVHCAEVLGTPIVGDYKYGWQ 439
Query: 358 AHKKLGQY-FNSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISL 534
H+K Q F + + ++ + + K G++LE+GSIS+K P LHLHCK+M+LP++S
Sbjct: 440 VHRKWKQLPFPNLEKISNENALCK-KILPFGIDLESGSISEKHPRLHLHCKQMVLPDVSQ 498
Query: 535 ALQRGRIISN----QMESIRLDAPLPAHMQRSWDLLN 633
AL+ + SN ++SI LDAPLP++MQRSWD+LN
Sbjct: 499 ALRGVQTSSNYDFSDLKSIELDAPLPSYMQRSWDILN 535
>gb|EMJ01009.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
Length = 483
Score = 255 bits (652), Expect = 2e-65
Identities = 127/216 (58%), Positives = 167/216 (77%), Gaps = 5/216 (2%)
Frame = +1
Query: 1 FREKTFGASND-VPGSDRILQKKYYALVIGSPRRREGLISVPLMKVVVDNGKSERITVVD 177
FREKTFGASND + + RILQ++Y+ALVIGSPR+R+GLIS PL KVVVDNGKS+RIT+V+
Sbjct: 267 FREKTFGASNDEIDDAKRILQRRYWALVIGSPRQRKGLISAPLGKVVVDNGKSDRITIVN 326
Query: 178 NNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ 357
++ TL QH+ T+Y+VI S GYTWLEL+PLTGRKHQLRVHCAEVL TPIVGDYKYGWQ
Sbjct: 327 DSQTLPSQHAITKYKVIGSPCPGYTWLELTPLTGRKHQLRVHCAEVLRTPIVGDYKYGWQ 386
Query: 358 AHKKLGQYFNSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLA 537
H+ S ++ D++ + K+ L +E+GS+S+K P LHLHCK+M+LPN++LA
Sbjct: 387 THRNWKPLAWSNNECHSDEEFPKRKNLPFDLNMESGSVSEKNPRLHLHCKQMVLPNVNLA 446
Query: 538 LQRGRIIS----NQMESIRLDAPLPAHMQRSWDLLN 633
LQ ++ S +++ES+ L A LP+ MQRSW++ N
Sbjct: 447 LQNVKLHSDSDLSELESLELVAALPSFMQRSWNITN 482
>gb|ESW29223.1| hypothetical protein PHAVU_002G053600g [Phaseolus vulgaris]
Length = 432
Score = 251 bits (642), Expect = 3e-64
Identities = 130/213 (61%), Positives = 161/213 (75%), Gaps = 4/213 (1%)
Frame = +1
Query: 1 FREKTFGASNDVPGSDRILQKKYYALVIGSPRRREGLISVPLMKVVVDNGKSERITVVDN 180
FREKT A +D RILQ++Y+ALV+G PR +GL++ L KVVVDNGKS+RITVVDN
Sbjct: 218 FREKTSRALDDTEEEKRILQRRYWALVLGRPRCSKGLVTASLGKVVVDNGKSDRITVVDN 277
Query: 181 NHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQA 360
+ +LS QH+ TEYRVI+SS GYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQA
Sbjct: 278 STSLSSQHAITEYRVIASSSQGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQA 337
Query: 361 HKKLGQYFNSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLAL 540
H+K G + S + ++ + + + GL L NGSIS+ +P LHLHCKK++LPNIS AL
Sbjct: 338 HRKWGNFDLSNVEDSCEEHLKE-ETLPFGLNLNNGSISENRPRLHLHCKKIVLPNISEAL 396
Query: 541 QRGRIISN----QMESIRLDAPLPAHMQRSWDL 627
Q + SN Q+E ++L A LP +MQRSWD+
Sbjct: 397 QNVQSFSNCDLSQVEGLQLVADLPPYMQRSWDI 429
>ref|XP_004511295.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cicer
arietinum]
Length = 458
Score = 250 bits (639), Expect = 7e-64
Identities = 130/217 (59%), Positives = 163/217 (75%), Gaps = 6/217 (2%)
Frame = +1
Query: 1 FREKTFGASNDVPGSDRILQKKYYALVIGSPRRREGLISVPLMKVVVDNGKSERITVVDN 180
FR+KT AS+ RILQ++Y+ALVIG PRR GLI+ PL KVVVDNGKS+RIT+V+N
Sbjct: 242 FRDKTSRASDHNDTEKRILQRRYWALVIGRPRRSGGLITSPLGKVVVDNGKSDRITIVNN 301
Query: 181 NHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQA 360
+ +S QH+ TEYRV+ SS GYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQA
Sbjct: 302 STLVSSQHAVTEYRVLGSSSDGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQA 361
Query: 361 HKKLGQYFNSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLAL 540
HKK G +F+ + +++ + + GL L GSISDK P LHLHCK++ILPNIS AL
Sbjct: 362 HKKWG-HFDLCNLEDSTEELLKEETLPFGLNLNKGSISDKHPRLHLHCKQIILPNISQAL 420
Query: 541 QRGRIIS------NQMESIRLDAPLPAHMQRSWDLLN 633
Q + +S + +E+++L+A LP +MQRSWD+ N
Sbjct: 421 QDVQSLSASNCDLSVVEALKLEAELPPYMQRSWDVTN 457
>ref|XP_006573909.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
X2 [Glycine max]
Length = 429
Score = 250 bits (638), Expect = 9e-64
Identities = 127/215 (59%), Positives = 160/215 (74%), Gaps = 4/215 (1%)
Frame = +1
Query: 1 FREKTFGASNDVPGSDRILQKKYYALVIGSPRRREGLISVPLMKVVVDNGKSERITVVDN 180
FREKT AS+D+ RILQ++Y+ALV+G PRR +GL++ L KVVVDNG+S+RIT+VDN
Sbjct: 215 FREKTSRASDDIGKEKRILQRRYWALVLGCPRRPKGLVTASLGKVVVDNGRSDRITIVDN 274
Query: 181 NHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQA 360
+ +S QH+ TEYRVI+SS GYTWLEL+PLTGRKHQLRVHCAEVLGTPIVGDYKYGWQA
Sbjct: 275 STLMSSQHAITEYRVIASSSQGYTWLELTPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQA 334
Query: 361 HKKLGQYFNSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLAL 540
H+K G + + R++ + + K GL L GSIS+ P LHLHCK+M+LPNIS AL
Sbjct: 335 HRKWGHFDLPNVEDSREELLNEEKLP-FGLNLNKGSISENHPRLHLHCKQMVLPNISQAL 393
Query: 541 QRGRIIS----NQMESIRLDAPLPAHMQRSWDLLN 633
Q + S + +E + L A LP +MQRSWD+ N
Sbjct: 394 QNVQSASSCDLSLVEELELVADLPPYMQRSWDVTN 428
>ref|XP_003516775.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
X1 [Glycine max]
Length = 427
Score = 250 bits (638), Expect = 9e-64
Identities = 127/215 (59%), Positives = 160/215 (74%), Gaps = 4/215 (1%)
Frame = +1
Query: 1 FREKTFGASNDVPGSDRILQKKYYALVIGSPRRREGLISVPLMKVVVDNGKSERITVVDN 180
FREKT AS+D+ RILQ++Y+ALV+G PRR +GL++ L KVVVDNG+S+RIT+VDN
Sbjct: 213 FREKTSRASDDIGKEKRILQRRYWALVLGCPRRPKGLVTASLGKVVVDNGRSDRITIVDN 272
Query: 181 NHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQA 360
+ +S QH+ TEYRVI+SS GYTWLEL+PLTGRKHQLRVHCAEVLGTPIVGDYKYGWQA
Sbjct: 273 STLMSSQHAITEYRVIASSSQGYTWLELTPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQA 332
Query: 361 HKKLGQYFNSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLAL 540
H+K G + + R++ + + K GL L GSIS+ P LHLHCK+M+LPNIS AL
Sbjct: 333 HRKWGHFDLPNVEDSREELLNEEKLP-FGLNLNKGSISENHPRLHLHCKQMVLPNISQAL 391
Query: 541 QRGRIIS----NQMESIRLDAPLPAHMQRSWDLLN 633
Q + S + +E + L A LP +MQRSWD+ N
Sbjct: 392 QNVQSASSCDLSLVEELELVADLPPYMQRSWDVTN 426
>gb|EMJ01008.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
Length = 481
Score = 248 bits (634), Expect = 3e-63
Identities = 126/216 (58%), Positives = 166/216 (76%), Gaps = 5/216 (2%)
Frame = +1
Query: 1 FREKTFGASND-VPGSDRILQKKYYALVIGSPRRREGLISVPLMKVVVDNGKSERITVVD 177
FREKTFGASND + + RILQ++Y+ALVIGSPR+R+GLIS PL KVVVDNGKS+RIT+V+
Sbjct: 267 FREKTFGASNDEIDDAKRILQRRYWALVIGSPRQRKGLISAPLGKVVVDNGKSDRITIVN 326
Query: 178 NNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ 357
++ TL QH+ T+Y+VI S YTWLEL+PLTGRKHQLRVHCAEVL TPIVGDYKYGWQ
Sbjct: 327 DSQTLPSQHAITKYKVIGSPC--YTWLELTPLTGRKHQLRVHCAEVLRTPIVGDYKYGWQ 384
Query: 358 AHKKLGQYFNSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLA 537
H+ S ++ D++ + K+ L +E+GS+S+K P LHLHCK+M+LPN++LA
Sbjct: 385 THRNWKPLAWSNNECHSDEEFPKRKNLPFDLNMESGSVSEKNPRLHLHCKQMVLPNVNLA 444
Query: 538 LQRGRIIS----NQMESIRLDAPLPAHMQRSWDLLN 633
LQ ++ S +++ES+ L A LP+ MQRSW++ N
Sbjct: 445 LQNVKLHSDSDLSELESLELVAALPSFMQRSWNITN 480
>ref|XP_003635999.1| RNA pseudourine synthase [Medicago truncatula]
gi|355501934|gb|AES83137.1| RNA pseudourine synthase
[Medicago truncatula]
Length = 430
Score = 247 bits (631), Expect = 6e-63
Identities = 129/219 (58%), Positives = 164/219 (74%), Gaps = 8/219 (3%)
Frame = +1
Query: 1 FREKTFGASNDVPGSDRI-LQKKYYALVIGSPRRREGLISVPLMKVVVDNGKSERITVVD 177
FREKT ASN+ +++I LQ++Y+ALV+G PRR G+++ PL KVVVDNGKS+RIT+VD
Sbjct: 213 FREKTSRASNEENDTEKIILQRRYWALVLGCPRRSGGVVNAPLGKVVVDNGKSDRITIVD 272
Query: 178 NNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ 357
N+ LS QH+ TEYRVISSS G+TWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYG Q
Sbjct: 273 NSALLSSQHAVTEYRVISSSSHGFTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGRQ 332
Query: 358 AHKKLGQY-FNSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISL 534
AHKK GQ+ F++ D + + GL L GSISDK P LHLHCK+++LPNIS
Sbjct: 333 AHKKWGQFDFSNLEDSTEEHLKEEALP--FGLNLNKGSISDKHPRLHLHCKQIVLPNISQ 390
Query: 535 ALQRGRIISNQ------MESIRLDAPLPAHMQRSWDLLN 633
ALQ + +S+ +ES+ L+A LP +M++SW++ N
Sbjct: 391 ALQNVQSVSDSSYDLSAVESLELEADLPPYMKKSWEVTN 429
>gb|EOX98365.1| Ribosomal pseudouridine synthase, putative [Theobroma cacao]
Length = 477
Score = 244 bits (623), Expect = 5e-62
Identities = 126/218 (57%), Positives = 166/218 (76%), Gaps = 7/218 (3%)
Frame = +1
Query: 1 FREKTFGAS-NDVPGSDRILQKKYYALVIGSPRRREGLISVPLMKVVVDNGKSERITVVD 177
FRE+T AS +DV RILQK+Y+ALVIGSPRR +G+I PL KVVVD+GKS+RITV D
Sbjct: 261 FREETNDASKDDVDNEKRILQKRYWALVIGSPRRPKGMIVAPLRKVVVDDGKSDRITVFD 320
Query: 178 NNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ 357
N+ +S Q + TEY+VI ++ GYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ
Sbjct: 321 NSQIVSSQRAKTEYQVIKTTSHGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ 380
Query: 358 AHKKLGQYFNSASDLKR--DDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNIS 531
AH++ SDLK+ +DK + GL +++GSIS K+P LHLHC++MI PN+S
Sbjct: 381 AHRRWQHL--PESDLKKSSNDKCPEENMLPFGLNMDSGSISAKRPRLHLHCREMIFPNVS 438
Query: 532 LALQRGRIIS----NQMESIRLDAPLPAHMQRSWDLLN 633
ALQ ++ + ++++S+ + APLP++MQ+SWD++N
Sbjct: 439 QALQNLQLSTDHDLSKLKSLEVVAPLPSYMQKSWDIMN 476
>ref|XP_004305959.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Fragaria
vesca subsp. vesca]
Length = 476
Score = 240 bits (613), Expect = 7e-61
Identities = 123/216 (56%), Positives = 163/216 (75%), Gaps = 5/216 (2%)
Frame = +1
Query: 1 FREKTFGASNDV-PGSDRILQKKYYALVIGSPRRREGLISVPLMKVVVDNGKSERITVVD 177
FREKTFGAS+DV + ILQ++Y ALVIGSPR++EGLISVPL KVVVDNGKS+RIT+++
Sbjct: 250 FREKTFGASDDVIKHAKSILQRRYLALVIGSPRQQEGLISVPLGKVVVDNGKSDRITILN 309
Query: 178 NNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ 357
L QH+ T+Y+VI SS G+TWLEL PLTGRKHQLRVHCAEVLGTPIVGDYKYGW+
Sbjct: 310 KAQCLPSQHAITKYKVIGSSCPGFTWLELIPLTGRKHQLRVHCAEVLGTPIVGDYKYGWR 369
Query: 358 AHKKLGQYFNSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLA 537
HK S ++ +++ ++ K+ L +++GSI +K LHLH K+M+LPN+SLA
Sbjct: 370 THKDWKPVAWSKTECHSNEERSKRKNLPFDLNMDSGSIDEKNLRLHLHSKQMVLPNVSLA 429
Query: 538 LQRGRIIS----NQMESIRLDAPLPAHMQRSWDLLN 633
LQ ++ + + +ESI L AP+P++MQ+SWD+ N
Sbjct: 430 LQNVKLHAECDLSGLESIELVAPMPSYMQKSWDITN 465
>ref|NP_188575.1| RNA pseudourine synthase 4 [Arabidopsis thaliana]
gi|75274073|sp|Q9LT72.1|PUS4_ARATH RecName: Full=RNA
pseudouridine synthase 4, mitochondrial; AltName:
Full=RNA pseudouridylate synthase 4; AltName:
Full=RNA-uridine isomerase 4; Flags: Precursor
gi|11994467|dbj|BAB02469.1| unnamed protein product
[Arabidopsis thaliana] gi|110737723|dbj|BAF00800.1|
hypothetical protein [Arabidopsis thaliana]
gi|134031916|gb|ABO45695.1| At3g19440 [Arabidopsis
thaliana] gi|332642719|gb|AEE76240.1| RNA pseudourine
synthase 4 [Arabidopsis thaliana]
Length = 477
Score = 237 bits (605), Expect = 6e-60
Identities = 125/215 (58%), Positives = 156/215 (72%), Gaps = 5/215 (2%)
Frame = +1
Query: 1 FREKTFGASN-DVPGSDRILQKKYYALVIGSPRRREGLISVPLMKVVVDNGKSERITVVD 177
FREKT GAS V + + L++KY ALVIG P R+ G IS PL KVVVD+GKSERITV D
Sbjct: 259 FREKTTGASAYGVKKNVKSLKRKYMALVIGCPPRQRGQISAPLRKVVVDDGKSERITVND 318
Query: 178 NNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ 357
N +S QH+ TEYRVI SSP GYTWLEL PLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ
Sbjct: 319 NGELVSTQHAITEYRVIESSPHGYTWLELRPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ 378
Query: 358 AHKKLGQYFNSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLA 537
AHK + +S ++ T+ + GL+L+ G +S KQP LHLH K++ LPNIS
Sbjct: 379 AHKAREPFVSS------ENNPTKQSSSPFGLDLDGGDVSSKQPHLHLHSKQIDLPNISQL 432
Query: 538 LQRGRIIS----NQMESIRLDAPLPAHMQRSWDLL 630
L++ ++ S + ++S++ DAPLP+HMQ S++LL
Sbjct: 433 LEKMQVSSDSDISDLDSLKFDAPLPSHMQLSFNLL 467
>ref|XP_006297582.1| hypothetical protein CARUB_v10013603mg [Capsella rubella]
gi|482566291|gb|EOA30480.1| hypothetical protein
CARUB_v10013603mg [Capsella rubella]
Length = 476
Score = 236 bits (603), Expect = 1e-59
Identities = 125/215 (58%), Positives = 155/215 (72%), Gaps = 5/215 (2%)
Frame = +1
Query: 1 FREKTFGASN-DVPGSDRILQKKYYALVIGSPRRREGLISVPLMKVVVDNGKSERITVVD 177
FREKT GAS V + + L++KY ALVIG PRR+ G IS PL KVVVD+GKS+RITV D
Sbjct: 258 FREKTSGASAYGVKKNIKSLKRKYMALVIGCPRRQRGQISAPLRKVVVDDGKSDRITVND 317
Query: 178 NNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ 357
N +S QH+ TEYRVI SSP GYTWLEL PLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ
Sbjct: 318 NGELVSTQHAITEYRVIESSPHGYTWLELRPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ 377
Query: 358 AHKKLGQYFNSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLA 537
AHK S ++ T+ + + GL+L+ G +S KQP LHLH K++ LPNIS
Sbjct: 378 AHKSREPLVTS------ENTPTKPQSSPFGLDLDGGDVSSKQPHLHLHSKQIDLPNISQL 431
Query: 538 LQRGRIIS----NQMESIRLDAPLPAHMQRSWDLL 630
L++ ++ S + ++S++ DAPLP HMQ S++LL
Sbjct: 432 LEKMQVSSDSDISDIDSLKFDAPLPTHMQLSFNLL 466