BLASTX nr result
ID: Rehmannia25_contig00012143
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00012143
(776 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002521193.1| conserved hypothetical protein [Ricinus comm... 76 1e-11
ref|XP_002313976.1| ubiquitin family protein [Populus trichocarp... 75 2e-11
ref|XP_006488563.1| PREDICTED: pentatricopeptide repeat-containi... 74 4e-11
gb|ESW18802.1| hypothetical protein PHAVU_006G071400g [Phaseolus... 74 4e-11
ref|XP_006425116.1| hypothetical protein CICLE_v10028251mg [Citr... 74 4e-11
ref|XP_003551233.1| PREDICTED: pentatricopeptide repeat-containi... 74 4e-11
ref|XP_003538312.1| PREDICTED: pentatricopeptide repeat-containi... 74 4e-11
gb|EOY34562.1| Pentatricopeptide repeat-containing protein [Theo... 73 1e-10
ref|XP_002278434.1| PREDICTED: pentatricopeptide repeat-containi... 72 2e-10
ref|XP_004168796.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 72 3e-10
gb|EMJ06247.1| hypothetical protein PRUPE_ppa004609mg [Prunus pe... 71 4e-10
ref|XP_004239038.1| PREDICTED: pentatricopeptide repeat-containi... 71 4e-10
ref|XP_006348674.1| PREDICTED: pentatricopeptide repeat-containi... 69 1e-09
ref|XP_004296059.1| PREDICTED: uncharacterized protein LOC101292... 69 2e-09
gb|EPS70238.1| hypothetical protein M569_04522 [Genlisea aurea] 66 1e-08
ref|XP_004500294.1| PREDICTED: pentatricopeptide repeat-containi... 66 2e-08
gb|EXB37964.1| hypothetical protein L484_011688 [Morus notabilis] 64 6e-08
ref|XP_003568652.1| PREDICTED: pentatricopeptide repeat-containi... 63 1e-07
dbj|BAJ88994.1| predicted protein [Hordeum vulgare subsp. vulgare] 62 2e-07
ref|XP_006293981.1| hypothetical protein CARUB_v10022972mg [Caps... 62 2e-07
>ref|XP_002521193.1| conserved hypothetical protein [Ricinus communis]
gi|223539607|gb|EEF41193.1| conserved hypothetical
protein [Ricinus communis]
Length = 499
Score = 76.3 bits (186), Expect = 1e-11
Identities = 34/45 (75%), Positives = 42/45 (93%)
Frame = -3
Query: 774 RRIQQQGNVDTYLTLCKRLSDANLIGPSLVYLHMRKHKLWIIKML 640
+RIQQ GNV++YL LCKRLSD NLIGPSLVYL+++K+KLWI+KML
Sbjct: 455 KRIQQWGNVESYLNLCKRLSDENLIGPSLVYLYIKKYKLWIMKML 499
>ref|XP_002313976.1| ubiquitin family protein [Populus trichocarpa]
gi|222850384|gb|EEE87931.1| ubiquitin family protein
[Populus trichocarpa]
Length = 500
Score = 75.1 bits (183), Expect = 2e-11
Identities = 33/45 (73%), Positives = 42/45 (93%)
Frame = -3
Query: 774 RRIQQQGNVDTYLTLCKRLSDANLIGPSLVYLHMRKHKLWIIKML 640
+RIQQ GNV++YL LCKRLSD NLIGPSLVYL+++K+KLWI+K+L
Sbjct: 456 KRIQQWGNVESYLKLCKRLSDVNLIGPSLVYLYIKKYKLWIMKLL 500
>ref|XP_006488563.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
chloroplastic-like [Citrus sinensis]
Length = 502
Score = 74.3 bits (181), Expect = 4e-11
Identities = 33/45 (73%), Positives = 40/45 (88%)
Frame = -3
Query: 774 RRIQQQGNVDTYLTLCKRLSDANLIGPSLVYLHMRKHKLWIIKML 640
+RIQQ GNV+ YL LCKRLSD +LIGP LVYL+++K+KLWIIKML
Sbjct: 458 KRIQQSGNVEAYLNLCKRLSDTSLIGPCLVYLYIKKYKLWIIKML 502
>gb|ESW18802.1| hypothetical protein PHAVU_006G071400g [Phaseolus vulgaris]
Length = 510
Score = 74.3 bits (181), Expect = 4e-11
Identities = 32/45 (71%), Positives = 41/45 (91%)
Frame = -3
Query: 774 RRIQQQGNVDTYLTLCKRLSDANLIGPSLVYLHMRKHKLWIIKML 640
+RIQQ GN+DTY+ LCK LSDANLIGP LV+L++RK+KLW++KML
Sbjct: 466 KRIQQYGNLDTYVRLCKSLSDANLIGPCLVHLYIRKYKLWVVKML 510
>ref|XP_006425116.1| hypothetical protein CICLE_v10028251mg [Citrus clementina]
gi|557527050|gb|ESR38356.1| hypothetical protein
CICLE_v10028251mg [Citrus clementina]
Length = 502
Score = 74.3 bits (181), Expect = 4e-11
Identities = 33/45 (73%), Positives = 40/45 (88%)
Frame = -3
Query: 774 RRIQQQGNVDTYLTLCKRLSDANLIGPSLVYLHMRKHKLWIIKML 640
+RIQQ GNV+ YL LCKRLSD +LIGP LVYL+++K+KLWIIKML
Sbjct: 458 KRIQQSGNVEAYLNLCKRLSDTSLIGPCLVYLYIKKYKLWIIKML 502
>ref|XP_003551233.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
chloroplastic-like [Glycine max]
Length = 508
Score = 74.3 bits (181), Expect = 4e-11
Identities = 32/45 (71%), Positives = 41/45 (91%)
Frame = -3
Query: 774 RRIQQQGNVDTYLTLCKRLSDANLIGPSLVYLHMRKHKLWIIKML 640
+RIQQ GN+DTY+ LCK LSDANLIGP LV+L++RK+KLW++KML
Sbjct: 464 KRIQQYGNLDTYVRLCKSLSDANLIGPCLVHLYIRKYKLWVVKML 508
>ref|XP_003538312.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
chloroplastic-like [Glycine max]
Length = 510
Score = 74.3 bits (181), Expect = 4e-11
Identities = 32/45 (71%), Positives = 41/45 (91%)
Frame = -3
Query: 774 RRIQQQGNVDTYLTLCKRLSDANLIGPSLVYLHMRKHKLWIIKML 640
+RIQQ GN+DTY+ LCK LSDANLIGP LV+L++RK+KLW++KML
Sbjct: 466 KRIQQYGNLDTYVRLCKSLSDANLIGPCLVHLYIRKYKLWVVKML 510
>gb|EOY34562.1| Pentatricopeptide repeat-containing protein [Theobroma cacao]
Length = 504
Score = 72.8 bits (177), Expect = 1e-10
Identities = 30/45 (66%), Positives = 41/45 (91%)
Frame = -3
Query: 774 RRIQQQGNVDTYLTLCKRLSDANLIGPSLVYLHMRKHKLWIIKML 640
+RIQQ GN++TY+ LCKRL DA+LIGP L+YL+++K+KLW+IKML
Sbjct: 460 KRIQQPGNIETYVNLCKRLYDASLIGPCLIYLYIKKYKLWVIKML 504
>ref|XP_002278434.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
chloroplastic [Vitis vinifera]
Length = 511
Score = 72.4 bits (176), Expect = 2e-10
Identities = 32/44 (72%), Positives = 39/44 (88%)
Frame = -3
Query: 771 RIQQQGNVDTYLTLCKRLSDANLIGPSLVYLHMRKHKLWIIKML 640
RIQQ GNV+TYL LCK LSDANLIGP LVYL+++K+KLWI+K +
Sbjct: 468 RIQQTGNVETYLKLCKHLSDANLIGPCLVYLYIKKYKLWILKTI 511
>ref|XP_004168796.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g30100, chloroplastic-like [Cucumis sativus]
Length = 501
Score = 71.6 bits (174), Expect = 3e-10
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = -3
Query: 774 RRIQQQGNVDTYLTLCKRLSDANLIGPSLVYLHMRKHKLWIIKML 640
+ I++ +V TYL LCK LSDANLIGPSLVYLH++KHKLWIIKML
Sbjct: 457 KEIREPESVHTYLDLCKCLSDANLIGPSLVYLHLQKHKLWIIKML 501
>gb|EMJ06247.1| hypothetical protein PRUPE_ppa004609mg [Prunus persica]
Length = 500
Score = 71.2 bits (173), Expect = 4e-10
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = -3
Query: 774 RRIQQQGNVDTYLTLCKRLSDANLIGPSLVYLHMRKHKLWIIKML 640
+ IQ+ G VDTYL LCKRLSDA+LIGP LVYL +RK+KLWI KML
Sbjct: 456 KSIQESGGVDTYLKLCKRLSDASLIGPCLVYLFIRKYKLWITKML 500
>ref|XP_004239038.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
chloroplastic-like [Solanum lycopersicum]
Length = 503
Score = 71.2 bits (173), Expect = 4e-10
Identities = 31/45 (68%), Positives = 40/45 (88%)
Frame = -3
Query: 774 RRIQQQGNVDTYLTLCKRLSDANLIGPSLVYLHMRKHKLWIIKML 640
RRIQQ GN++TYL LCK LSDA+LIGP LVYL+++K++LWII+ L
Sbjct: 459 RRIQQSGNLETYLNLCKHLSDASLIGPCLVYLYIKKYRLWIIRTL 503
>ref|XP_006348674.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
chloroplastic-like [Solanum tuberosum]
Length = 503
Score = 69.3 bits (168), Expect = 1e-09
Identities = 30/45 (66%), Positives = 40/45 (88%)
Frame = -3
Query: 774 RRIQQQGNVDTYLTLCKRLSDANLIGPSLVYLHMRKHKLWIIKML 640
RRIQQ G+++TYL LCK LSDA+LIGP LVYL+++K++LWII+ L
Sbjct: 459 RRIQQSGSLETYLNLCKHLSDASLIGPCLVYLYIKKYRLWIIRTL 503
>ref|XP_004296059.1| PREDICTED: uncharacterized protein LOC101292395 [Fragaria vesca
subsp. vesca]
Length = 1304
Score = 68.9 bits (167), Expect = 2e-09
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = -3
Query: 774 RRIQQQGNVDTYLTLCKRLSDANLIGPSLVYLHMRKHKLWIIK 646
+RIQQ G VDTYL LCKRLSDANLI L+YL+++KHKLWII+
Sbjct: 450 KRIQQSGTVDTYLKLCKRLSDANLIESCLLYLYIKKHKLWIIR 492
>gb|EPS70238.1| hypothetical protein M569_04522 [Genlisea aurea]
Length = 504
Score = 66.2 bits (160), Expect = 1e-08
Identities = 28/45 (62%), Positives = 38/45 (84%)
Frame = -3
Query: 774 RRIQQQGNVDTYLTLCKRLSDANLIGPSLVYLHMRKHKLWIIKML 640
RRI++ G VDTYL +C+ L+D +LI PSLVY+H+RKHKLWII ++
Sbjct: 460 RRIRRSGYVDTYLDVCRCLADVDLISPSLVYVHLRKHKLWIISLV 504
>ref|XP_004500294.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
chloroplastic-like [Cicer arietinum]
Length = 508
Score = 65.9 bits (159), Expect = 2e-08
Identities = 27/45 (60%), Positives = 38/45 (84%)
Frame = -3
Query: 774 RRIQQQGNVDTYLTLCKRLSDANLIGPSLVYLHMRKHKLWIIKML 640
+RIQQ GN+DTY+ LCK L +ANLIG + YL++RK+KLW++KM+
Sbjct: 464 KRIQQYGNLDTYIKLCKSLYEANLIGACVCYLYIRKYKLWVVKMI 508
>gb|EXB37964.1| hypothetical protein L484_011688 [Morus notabilis]
Length = 516
Score = 63.9 bits (154), Expect = 6e-08
Identities = 28/45 (62%), Positives = 37/45 (82%)
Frame = -3
Query: 774 RRIQQQGNVDTYLTLCKRLSDANLIGPSLVYLHMRKHKLWIIKML 640
+RI+ V+TYL LCK LSD NLIGP L+YL+++K+KLWI+KML
Sbjct: 472 KRIKGPDTVETYLKLCKHLSDYNLIGPCLIYLYIKKYKLWIMKML 516
>ref|XP_003568652.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
chloroplastic-like [Brachypodium distachyon]
Length = 472
Score = 63.2 bits (152), Expect = 1e-07
Identities = 25/45 (55%), Positives = 38/45 (84%)
Frame = -3
Query: 774 RRIQQQGNVDTYLTLCKRLSDANLIGPSLVYLHMRKHKLWIIKML 640
R IQQ GN+++Y+ LCKRLS+ ++IGP ++YL++RK KLW++ ML
Sbjct: 428 RNIQQSGNLESYMKLCKRLSETDMIGPCVIYLYVRKFKLWMMHML 472
>dbj|BAJ88994.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 470
Score = 62.4 bits (150), Expect = 2e-07
Identities = 25/45 (55%), Positives = 39/45 (86%)
Frame = -3
Query: 774 RRIQQQGNVDTYLTLCKRLSDANLIGPSLVYLHMRKHKLWIIKML 640
R+IQ+ GN+++Y+ LCKRLS+ +LI P +VYL++RK KLW+++ML
Sbjct: 426 RKIQEPGNLESYMKLCKRLSETDLIAPCVVYLYVRKFKLWMMRML 470
>ref|XP_006293981.1| hypothetical protein CARUB_v10022972mg [Capsella rubella]
gi|482562689|gb|EOA26879.1| hypothetical protein
CARUB_v10022972mg [Capsella rubella]
Length = 505
Score = 62.0 bits (149), Expect = 2e-07
Identities = 25/45 (55%), Positives = 37/45 (82%)
Frame = -3
Query: 774 RRIQQQGNVDTYLTLCKRLSDANLIGPSLVYLHMRKHKLWIIKML 640
R+IQ+ +++ Y+ LCKRL DA L+GP LVY++M K+KLWI+KM+
Sbjct: 461 RKIQRPRDIEAYMGLCKRLFDAGLVGPCLVYMYMDKYKLWIVKMM 505