BLASTX nr result
ID: Rehmannia25_contig00012110
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00012110
(1353 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 333 1e-88
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 324 5e-86
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665... 317 1e-83
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664... 303 1e-79
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 301 5e-79
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 301 5e-79
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268... 293 1e-76
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663... 291 6e-76
gb|ABD96948.1| hypothetical protein [Cleome spinosa] 280 8e-73
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 275 3e-71
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 271 4e-70
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 271 4e-70
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 271 4e-70
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 271 6e-70
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali... 268 4e-69
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 267 9e-69
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal... 265 3e-68
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta... 265 3e-68
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ... 264 7e-68
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 261 4e-67
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 333 bits (853), Expect = 1e-88
Identities = 172/456 (37%), Positives = 259/456 (56%), Gaps = 6/456 (1%)
Frame = +1
Query: 1 FDSIS*DFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSINGGTYGLFKGQRGLRQGDPLS 180
+DS+ FL +L LGFP +F+ WIM CV T SYS+ +NG F Q+GLRQGDPLS
Sbjct: 592 YDSVEWVFLESMLKELGFPSMFIRWIMACVKTVSYSILLNGIPSIPFDAQKGLRQGDPLS 651
Query: 181 PYLFVICLEYLSRLINKKTTNTHFNYHPKCGPLNITHLAFADDLMLLSRGDSISIQILMD 360
P+LF + +EYLSR + + FN+HPKC + +THL FADDL++ +R D+ SI +M
Sbjct: 652 PFLFALSMEYLSRCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLMFARADASSISKIMA 711
Query: 361 CLKDFGLKSGLQMNVLKSNIYMAGIGERETGEILEFSQLVPGTMPFRYLGVPLAAERLKV 540
F SGLQ ++ KS IY G+ E ++ + Q+ G++PFRYLGVPLA+++L
Sbjct: 712 AFNSFSKASGLQASIEKSCIYFGGVCHEEAEQLADRIQMPIGSLPFRYLGVPLASKKLNF 771
Query: 541 VYFEPLMDKIRSYINGWSGPTLSYAGRTELIRSVLQGVASFWISIFPLPDQVRKNVIKLC 720
+PL+DKI + GW LSYAGR +L++++L + ++W IFPLP ++ K V C
Sbjct: 772 SQCKPLIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIFPLPKKLIKAVETTC 831
Query: 721 RNFLW-----GSKKACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWY 885
R FLW S KA VAW PK GGL + ++ WN A + K+L I + LW
Sbjct: 832 RKFLWTGTVDTSYKAPVAWDFLQQPKSTGGLNVTNMVLWNKAAILKLLWAITFKQDKLWV 891
Query: 886 RWIHHYYLRNRSIWDWNVHTSDSPLIKNILRIRDRLIDTCGSQQSAEQKIEYWSTGLLSK 1065
RW++ YY++ ++I + V ++ S +++ I R+ L T G + + ++
Sbjct: 892 RWVNAYYIKRQNIENVTVSSNTSWILRKIFESRELLTRTGGWEAVSNH---------MNF 942
Query: 1066 CTRDAYETFRPHGNNVCWKSVIWGPSIPPKHSFIMWLCILGRLKTKNRLGFMDIE-NDTC 1242
+ Y+ + NV WK +I PK FI+WL +L RL T R+ + + + C
Sbjct: 943 SIKKTYKLLQEDYENVVWKRLICNNKATPKSQFILWLAMLNRLATAERVSRWNRDVSPLC 1002
Query: 1243 VFCGEQQESIYHLYFECTFCKQVWDATRQWIGLHRQ 1350
CG + E+I HL+F C + K++W ++ L Q
Sbjct: 1003 KMCGNEIETIQHLFFNCIYSKEIWGKVLLYLNLQPQ 1038
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 324 bits (831), Expect = 5e-86
Identities = 169/446 (37%), Positives = 248/446 (55%), Gaps = 8/446 (1%)
Frame = +1
Query: 1 FDSIS*DFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSINGGTYGLFKGQRGLRQGDPLS 180
+DS+ FL +L GFP FV WIMECVST SYS+ +NG F+ ++GLRQGDP+S
Sbjct: 589 YDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQPFQARKGLRQGDPMS 648
Query: 181 PYLFVICLEYLSRLINKKTTNTHFNYHPKCGPLNITHLAFADDLMLLSRGDSISIQILMD 360
P+LF +C+EYLSR + + + FN+HPKC LNITHL FADDL++ R D S+ +
Sbjct: 649 PFLFALCMEYLSRCLEELKGSPDFNFHPKCERLNITHLMFADDLLMFCRADKSSLDHMNV 708
Query: 361 CLKDFGLKSGLQMNVLKSNIYMAGIGERETGEILEFSQLVPGTMPFRYLGVPLAAERLKV 540
+ F SGL + KSNIY G+ + E+ ++ + G +PFRYLGVPL +++L
Sbjct: 709 AFQKFSHASGLAASHEKSNIYFCGVDDETARELADYVHMQLGELPFRYLGVPLTSKKLTY 768
Query: 541 VYFEPLMDKIRSYINGWSGPTLSYAGRTELIRSVLQGVASFWISIFPLPDQVRKNVIKLC 720
+PL++ I + W LSYAGR +LI+S+L + ++W IFPL +V + V K+C
Sbjct: 769 AQCKPLVEMITNRAQTWMAKLLSYAGRLQLIKSILSSMQNYWAHIFPLSKKVIQAVEKVC 828
Query: 721 RNFLW-----GSKKACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWY 885
R FLW +KKA VAW T PK GG + ++K WN A + K+L I + LW
Sbjct: 829 RKFLWTGKTEETKKAPVAWATIQRPKSRGGWNVINMKYWNRAAMLKLLWAIEFKRDKLWV 888
Query: 886 RWIHHYYLRNRSIWDWNVHTSDSPLIKNILRIRDRLIDTCGSQQSAEQKIEYWSTGLLSK 1065
RWIH YY++ + I N+ + +++ I++ RD L I W +
Sbjct: 889 RWIHSYYIKRQDILTVNISNQTTWILRKIVKARDHL-----------SNIGDWDEICIGD 937
Query: 1066 --CTRDAYETFRPHGNNVCWKSVIWGPSIPPKHSFIMWLCILGRLKTKNRLGFMDIEND- 1236
+ AY+ +G V W+ +I PK FI+W+ + RL T +R+ ++ D
Sbjct: 938 KFSMKKAYKKISENGERVRWRRLICNNYATPKSKFILWMMLHERLPTVDRISRWGVQCDL 997
Query: 1237 TCVFCGEQQESIYHLYFECTFCKQVW 1314
C E+I HL+F C++ VW
Sbjct: 998 NYRLCRNDGETIQHLFFSCSYSAGVW 1023
>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
Length = 506
Score = 317 bits (811), Expect = 1e-83
Identities = 167/425 (39%), Positives = 250/425 (58%), Gaps = 6/425 (1%)
Frame = +1
Query: 79 MECVSTTSYSLSINGGTYGLFKGQRGLRQGDPLSPYLFVICLEYLSRLINKKTTNTHFNY 258
M VST SY ++NG + +RGLRQGDP+SP LFVI +E L+R + K + FNY
Sbjct: 1 MIAVSTVSYRFNVNGYKTEIMGARRGLRQGDPISPMLFVIVMECLNRYLYKMQKDGDFNY 60
Query: 259 HPKCGPLNITHLAFADDLMLLSRGDSISIQILMDCLKDFGLKSGLQMNVLKSNIYMAGIG 438
HPKC L IT+L FADDL+L SRGD IS+ ++M + F +GL +N K ++ AGI
Sbjct: 61 HPKCDKLKITNLCFADDLLLFSRGDKISVGMMMRAYESFSKATGLLVNPQKCSLLCAGID 120
Query: 439 ERETGEILEFSQLVPGTMPFRYLGVPLAAERLKVVYFEPLMDKIRSYINGWSGPTLSYAG 618
EILE S G +PF+YLGVP+ +++L +++ PL+DKI I W+ LSYAG
Sbjct: 121 AVTKREILEVSGFQEGQLPFKYLGVPVTSKKLSTIHYSPLIDKIVGKIKHWTARLLSYAG 180
Query: 619 RTELIRSVLQGVASFWISIFPLPDQVRKNVIKLCRNFLW-----GSKKACVAWKTCCLPK 783
R +L+ SV+ + ++W++ FP P V + + +CR FLW GS+K+ VAWK C P+
Sbjct: 181 RLQLVNSVMFALTNYWLNCFPFPKSVLQKIEAICRIFLWTGGFEGSRKSPVAWKQICSPR 240
Query: 784 HEGGLGLRDIKSWNHALLAKILRNIHANKQTLWYRWIHHYYLRNRSIWDWNVHTSDSPLI 963
GGL + DI WN A L K+L N+ + + +LW +WI YY++ + + +DS ++
Sbjct: 241 SCGGLNIIDIDIWNKANLMKLLWNLSSKEDSLWVKWIQAYYVKRSELMHIEMKNTDSWIM 300
Query: 964 KNILRIRDRLIDTCGSQQSAEQKIEYWSTGLLSKCTRDAYETFRPHGNNVCWKSVIWGPS 1143
K IL+ R+ L + + E G ++ Y + G WK++++G +
Sbjct: 301 KAILKQREDL-------EKIDNMEELMIRGSIN--MGKLYRKLQDCGQRKEWKNLLYGNT 351
Query: 1144 IPPKHSFIMWLCILGRLKTKNRL-GFMDIENDTCVFCGEQQESIYHLYFECTFCKQVWDA 1320
P+ +FI+WL GRL TK+RL + I++ +C FC E +ES+ HL+F C K+VW
Sbjct: 352 ARPRANFILWLACHGRLSTKDRLCKYGMIDDKSCCFCSE-EESMNHLFFVCDNSKRVWME 410
Query: 1321 TRQWI 1335
QW+
Sbjct: 411 VLQWV 415
>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
Length = 939
Score = 303 bits (775), Expect = 1e-79
Identities = 158/451 (35%), Positives = 245/451 (54%), Gaps = 6/451 (1%)
Frame = +1
Query: 1 FDSIS*DFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSINGGTYGLFKGQRGLRQGDPLS 180
+D++ D L +L LGFP F+ WIM V + +Y +ING + +RG+RQGDP+S
Sbjct: 417 YDTVHWDALEHILRELGFPDQFIKWIMIAVRSVTYVFNINGRFTRRLEARRGIRQGDPIS 476
Query: 181 PYLFVICLEYLSRLINKKTTNTHFNYHPKCGPLNITHLAFADDLMLLSRGDSISIQILMD 360
P LF++ +EYL+R++++ +FNYH KC + IT+L FADDL+L SRGD S+QI++D
Sbjct: 477 PLLFILVMEYLNRILSQLDKIPNFNYHSKCEKMKITNLCFADDLLLFSRGDIGSVQIMLD 536
Query: 361 CLKDFGLKSGLQMNVLKSNIYMAGIGERETGEILEFSQLVPGTMPFRYLGVPLAAERLKV 540
F GL +N K NIY + ++L S G MPFRYLG+PL++++L +
Sbjct: 537 KFNTFLRSMGLHVNPSKCNIYCGSVDINVKEQLLLISGFKEGKMPFRYLGIPLSSKKLNI 596
Query: 541 VYFEPLMDKIRSYINGWSGPTLSYAGRTELIRSVLQGVASFWISIFPLPDQVRKNVIKLC 720
+++ L+DKI I WS LSYAGR +LI+SV+ +FW+ PLP V + +C
Sbjct: 597 KHYQVLIDKIVGRITHWSAGLLSYAGRVQLIQSVIFATINFWMQCLPLPKFVIMRINAIC 656
Query: 721 RNFLW-----GSKKACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWY 885
R+FLW S+K+ +AW+ C PK GGL + ++ WN + K+L N+ LW
Sbjct: 657 RSFLWIGNSNISRKSPIAWEKVCSPKINGGLNIINLAIWNKISILKLLWNVCNKSDNLWI 716
Query: 886 RWIHHYYLRNRSIWDWNVHTSDSPLIKNILRIRDRLIDTCGSQQSAEQKIEYWSTGLLSK 1065
+W+H YY+R +SIW + S S ++ +++++R L+ Q +
Sbjct: 717 KWLHTYYIRGQSIWSMVLKKSHSWIMSSMMKLRPLLLQYQSRMQDVFK------------ 764
Query: 1066 CTRDAYETFRPHGNNVCWKSVIWGPSIPPKHSFIMWLCILGRLKTKNRLGFMDIEND-TC 1242
+ Y + W++++ P+ F +W RL +K+RL + D C
Sbjct: 765 -MKKIYLALFEESEKMSWRTLMCNNLARPRALFCLWQACHFRLASKDRLIKFGLNVDANC 823
Query: 1243 VFCGEQQESIYHLYFECTFCKQVWDATRQWI 1335
FC ES HL+F C K +W A W+
Sbjct: 824 AFC-SSMESHEHLFFGCIELKTIWTAVLNWL 853
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 301 bits (770), Expect = 5e-79
Identities = 179/528 (33%), Positives = 270/528 (51%), Gaps = 83/528 (15%)
Frame = +1
Query: 1 FDSIS*DFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSINGGTYGLFKGQRGLRQGDPLS 180
FDS+ FL + L+ + F F+ WI C++T S+S+ +NG G F+ +RGLRQG LS
Sbjct: 251 FDSVQWSFLTNTLVAMNFSPTFIHWINLCITTASFSVQVNGDLVGYFQSKRGLRQGCSLS 310
Query: 181 PYLFVICLEYLSRLINKKTTNTHFNYHPKCGPLNITHLAFADDLMLLSRGDSISIQILMD 360
PYLFVIC++ LS++++K F +HPKC L +THL+FADDLM+LS G + SI+ +++
Sbjct: 311 PYLFVICMDVLSKMLDKAAGVRKFGFHPKCQRLGLTHLSFADDLMVLSDGKTRSIEGILE 370
Query: 361 CLKDFGLKSGLQMNVLKSNIYMAGIGERETGEILEFSQLVPGTMPFRYLGVPLAAERLKV 540
+F +SGL++++ KS +YMAG+ EI G +P RYLG+PL +RL
Sbjct: 371 VFDEFCKRSGLRISLEKSTLYMAGVSPIIKQEIAAKFLFDVGQLPVRYLGLPLVTKRLTS 430
Query: 541 VYFEPLMDKIRSYINGWSGPTLSYAGRTELIRSVLQGVASFWISIFPLPDQVRKNVIKLC 720
+ PL+++I+ I W+ S+AGR LI+SVL + +FW++ F LP Q + + KLC
Sbjct: 431 ADYSPLLEQIKKRIATWTFRFFSFAGRFNLIKSVLWSICNFWLAAFRLPRQCIREIDKLC 490
Query: 721 RNFLW-----GSKKACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWY 885
+FLW S KA ++W C PK EGGLGLR++K N K++ I +N +LW
Sbjct: 491 SSFLWSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKEANDVSCLKLVWRIISNSNSLWT 550
Query: 886 RWIHHYYLRNRSIWDWNVHTS-DSPLIKNILRIRD------------------------- 987
+W+ Y +R +SIW TS S + + IL+IRD
Sbjct: 551 KWVAEYLIRKKSIWSLKQSTSMGSWIWRKILKIRDVAKSFSRVEVGNGESASFWYDHWSA 610
Query: 988 --RLIDTCGSQQSAEQKI-------EYWS--------TGLLSKCTR----------DAYE 1086
RLIDT G + + + I + W+ T LL++ DA +
Sbjct: 611 HGRLIDTVGDKGTIDLGIPREASVADAWTRRSRRRHRTSLLNEIEEMMAYQRIHHSDAED 670
Query: 1087 T---------FRPH-------------GNNVCWKSVIWGPSIPPKHSFIMWLCILGRLKT 1200
T F+PH + V W +W PK++ WL I RL T
Sbjct: 671 TVLWRGKNDVFKPHFSTRDTWHLIKATSSTVSWHKGVWFRHATPKYALCTWLAIHNRLPT 730
Query: 1201 KNRL---GFMDIENDTCVFCGEQQESIYHLYFECTFCKQVWDATRQWI 1335
+R+ + CV C +++ HL+F C++ VW A + I
Sbjct: 731 GDRMLKWNSSGSVSGNCVLCTNNSKTLEHLFFSCSYASTVWAALAKGI 778
>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 301 bits (770), Expect = 5e-79
Identities = 165/446 (36%), Positives = 242/446 (54%), Gaps = 7/446 (1%)
Frame = +1
Query: 1 FDSIS*DFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSINGGTYGLFKGQRGLRQGDPLS 180
F+S+ F+R++L+ + FP FV WIM C+ST S+S+ +NG G F+ +RGLRQG LS
Sbjct: 131 FNSVQWSFIRNILLSMDFPMEFVHWIMLCISTASFSVQVNGELVGFFQSKRGLRQGCSLS 190
Query: 181 PYLFVICLEYLSRLINKKTTNTHFNYHPKCGPLNITHLAFADDLMLLSRGDSISIQILMD 360
PYLFV+ ++ LS+L+++ + F YH +C L++THL+FADDLM+LS G SI +++
Sbjct: 191 PYLFVMSMDVLSKLLDQAASAKKFGYHSRCKELSLTHLSFADDLMVLSDGKVRSIDGIVE 250
Query: 361 CLKDFGLKSGLQMNVLKSNIYMAGIGERETGEILEFSQLVPGTMPFRYLGVPLAAERLKV 540
F SGL++++ KS IY+AG+ E EI Q G +P RYLG+PL +RL
Sbjct: 251 VFDIFAKFSGLKISMEKSTIYLAGVTEDVYHEIQNRYQFDVGQLPVRYLGLPLVTKRLTA 310
Query: 541 VYFEPLMDKIRSYINGWSGPTLSYAGRTELIRSVLQGVASFWISIFPLPDQVRKNVIKLC 720
+ PL++ I+ I W+ LSYAGR LI SVL + +FW++ F LP + + + K+C
Sbjct: 311 TDYSPLLEHIKKKIGTWTTRYLSYAGRLNLITSVLWSICNFWLAAFRLPRECIREIDKIC 370
Query: 721 RNFLWGS-----KKACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWY 885
FLW +K V W C PK EGGLGLR +K N K++ I ++ +LW
Sbjct: 371 SAFLWSGPDLNPRKTRVCWGDVCKPKQEGGLGLRSLKEMNEVSCLKLIWRIVSHTNSLWV 430
Query: 886 RWIHHYYLRNRSIWDWNVHTS-DSPLIKNILRIRDRLIDTCGSQQSAEQKIEYWSTGLLS 1062
RWI Y L++ + W T+ DS L + + EY +
Sbjct: 431 RWIEQYLLKHDTFWSVQTTTNMDSVLWRG-------------------RNDEY----MPK 467
Query: 1063 KCTRDAYETFRPHGNNVCWKSVIWGPSIPPKHSFIMWLCILGRLKTKNR-LGFMDIENDT 1239
TRD + R V W IW PK SF WL + RL T ++ L + + T
Sbjct: 468 FSTRDTWNQTRNTSTPVTWHMGIWFAHATPKFSFCAWLAVQNRLSTGDKMLQWNRRLSPT 527
Query: 1240 CVFCGEQQESIYHLYFECTFCKQVWD 1317
CV C E+ HL+F C + ++W+
Sbjct: 528 CVLCNNNIETRNHLFFSCCYTAEIWE 553
>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
lycopersicum]
Length = 717
Score = 293 bits (750), Expect = 1e-76
Identities = 135/314 (42%), Positives = 201/314 (64%), Gaps = 5/314 (1%)
Frame = +1
Query: 1 FDSIS*DFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSINGGTYGLFKGQRGLRQGDPLS 180
+DS+ FL V+ GLGFP LF W+M+CV T +Y++ +NG F +GLRQGDP+S
Sbjct: 397 YDSVEWPFLEQVMEGLGFPDLFTKWVMKCVKTVNYTIVVNGQNTQRFDAAKGLRQGDPMS 456
Query: 181 PYLFVICLEYLSRLINKKTTNTHFNYHPKCGPLNITHLAFADDLMLLSRGDSISIQILMD 360
P+LF I +EYLSRL+ + F YHPK L++THL FADDL+L SRGD SI+ L
Sbjct: 457 PFLFAIAMEYLSRLLKGLKEDKSFKYHPKYAKLDVTHLCFADDLLLFSRGDLNSIKALQK 516
Query: 361 CLKDFGLKSGLQMNVLKSNIYMAGIGERETGEILEFSQLVPGTMPFRYLGVPLAAERLKV 540
C +F SGLQ N+ KS+IY G+ +I++ +PF+YLGVPL++++L
Sbjct: 517 CFTEFSQASGLQANLNKSSIYCGGVQMEVRQQIIQQLGYTIEELPFKYLGVPLSSKKLNT 576
Query: 541 VYFEPLMDKIRSYINGWSGPTLSYAGRTELIRSVLQGVASFWISIFPLPDQVRKNVIKLC 720
+ + PL++K+ + IN W+ LSYAGR +L+++VL GV + W +F +P ++ K + LC
Sbjct: 577 IQWYPLIEKVMARINSWTAKKLSYAGRAQLVKTVLFGVQALWAQLFIIPAKIIKLIEGLC 636
Query: 721 RNFLWG-----SKKACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWY 885
R++LW +KKA +AW C PK+EGGLGL ++K WN + + K+ ++ + LW
Sbjct: 637 RSYLWSGVGYVTKKALIAWDKVCSPKYEGGLGLINLKIWNRSAVTKLCWDLANKEDKLWI 696
Query: 886 RWIHHYYLRNRSIW 927
+WIH YY++ + W
Sbjct: 697 KWIHAYYIKGQREW 710
>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
Length = 514
Score = 291 bits (744), Expect = 6e-76
Identities = 147/446 (32%), Positives = 244/446 (54%), Gaps = 8/446 (1%)
Frame = +1
Query: 1 FDSIS*DFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSINGGTYGLFKGQRGLRQGDPLS 180
+D + L VL G P F+ W+M+ ++T +Y +ING + + + G+ QGDP+S
Sbjct: 78 YDMVDWGALEGVLTEFGLPKKFIGWVMKVITTVNYRFNINGELSNVLETKIGIWQGDPIS 137
Query: 181 PYLFVICLEYLSRLINKKTTNTHFNYHPKCGPLNITHLAFADDLMLLSRGDSISIQILMD 360
P LFV+ +EY +R++ K N FN+H +C L ITHL+FADD+ LL RGD SI++++
Sbjct: 138 PLLFVLMMEYFNRIMVKMQRNPSFNHHSQCERLGITHLSFADDVFLLCRGDKKSIKMIIK 197
Query: 361 CLKDFGLKSGLQMNVLKSNIYMAGIGERETGEILEFSQLVPGTMPFRYLGVPLAAERLKV 540
F +GLQ+N K ++ G+ I + + GT+P RYLGVPL+ ++L V
Sbjct: 198 AFSFFSKSTGLQINPAKCKVFCGGLNCDSIQVITKITGFEEGTLPVRYLGVPLSCKKLNV 257
Query: 541 VYFEPLMDKIRSYINGWSGPTLSYAGRTELIRSVLQGVASFWISIFPLPDQVRKNVIKLC 720
++ PL++KI I WS LS AGR +L+RS++ +A +W+S+FP+P +V + + +C
Sbjct: 258 HHYLPLVEKIVGKIRHWSSKLLSIAGRIQLVRSIITAIAQYWMSVFPMPKKVIQKIDSIC 317
Query: 721 RNFLWG-----SKKACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWY 885
R+F+W +K+ VAWK C P GGL L +++ WN + K L NI + + LW
Sbjct: 318 RSFIWSGSAEVKRKSLVAWKQVCKPARCGGLNLINLELWNVTAMLKCLWNICSKEDNLWV 377
Query: 886 RWIHHYYLRNRSIWDWNVHTSDSPLIKNILRIRDRL--IDTCGSQQSAEQKIEYWSTGLL 1059
+WIH Y+L+ ++ + ++ + ++K++++ R ++ + + ++K
Sbjct: 378 KWIHAYFLKGDNVMSATIKSNSTWILKSVMKQRPQVNNLQLVWIEMLRKRKFS------- 430
Query: 1060 SKCTRDAYETFRPHGNNVCWKSVIWGPSIPPKHSFIMWLCILGRLKTKNRLGFMD-IEND 1236
+ Y N + W ++ P+ + +WL RL TK RL M+ I+
Sbjct: 431 ---MKQVYMELVEDHNKIDWFRLLRYNRARPRANVTLWLACQNRLATKTRLKNMNMIQCS 487
Query: 1237 TCVFCGEQQESIYHLYFECTFCKQVW 1314
C C EQ E + HL F C K +W
Sbjct: 488 LCSLCKEQDEDLDHLMFSCRVTKAIW 513
>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
Length = 539
Score = 280 bits (717), Expect = 8e-73
Identities = 161/457 (35%), Positives = 242/457 (52%), Gaps = 19/457 (4%)
Frame = +1
Query: 1 FDSIS*DFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSINGGTYGLFKGQRGLRQGDPLS 180
FD++S +F+ ++ L P FV+W+ C+ T +S+SING G FKG+RGLRQGDPLS
Sbjct: 51 FDTVSWEFITKIMQALNLPRTFVTWVKVCMETPKFSVSINGELAGYFKGRRGLRQGDPLS 110
Query: 181 PYLFVICLEYLSRLINKKTTNTHFNYHPKCGPLNITHLAFADDLMLLSRGDSISIQILMD 360
PYLF++ +E LSR++++ + + HPKC ITHLAFADD+M+ + G++ S+ + +
Sbjct: 111 PYLFIMSMEVLSRMLDRCAAESRLSLHPKCHSPVITHLAFADDIMIFTSGETRSLLEVKN 170
Query: 361 CLKDFGLKSGLQMNVLKSNIYMAGIGERETGEILEFSQLVPGTMPFRYLGVPLAAERLKV 540
L F SGL +N K+ I++ G+ E + G +P RYLGV L+ RL
Sbjct: 171 TLDSFSRASGLYLNTEKTEIFLRGLNGTEASTLCAVIGFTRGYLPVRYLGVSLSPVRLTK 230
Query: 541 VYFEPLMDKIRSYINGWSGPTLSYAGRTELIRSVLQGVASFWISIFPLPDQVRKNVIKLC 720
++PL+D++++ IN W+ LSYAGR +L+ +V+ G+ + W IF LP K V +LC
Sbjct: 231 SDYQPLLDRVKAKINSWTTRYLSYAGRLQLVGTVIYGMVNAWGMIFMLPKFFTKQVDRLC 290
Query: 721 RNFLWGSKKA-CVAWKTCCLPKHEGGLGLRDIKSWNH---ALLAKILRNI---------- 858
FLWG+ V+W TCC P+ EGGLGLR I +N + +LR +
Sbjct: 291 AGFLWGAGTTHRVSWDTCCRPRKEGGLGLRKIAEFNQDPWTIYGSLLRYVGLTGPRSLRI 350
Query: 859 ----HANKQTLWYRWIHHYYLRNRSIWDWNVHTSDSPLIKNILRIRDRLIDTCGSQQSAE 1026
++ WI +R+ + H S P D D+ + E
Sbjct: 351 PLPSSVSQAVAGDSWIFP-GVRSDRLQQVLAHISTIPPPS-----PDGPSDSALWKYKEE 404
Query: 1027 QKIEYWSTGLLSKCTRDAYETFRPHGNNVCWKSVIWGPSIPPKHSFIMWLCILGRLKTKN 1206
Y+S+ TR + P W S++W P P+H+F+ W +L RL TK+
Sbjct: 405 DFRPYFSSSRTWNLTRTVH-VIAP------WSSIVWFPLAIPRHAFLHWQVMLFRLPTKD 457
Query: 1207 RLGFMDIEND-TCVFCGEQQESIYHLYFECTFCKQVW 1314
RL I +D TC C + ES HL+F CT+ +W
Sbjct: 458 RLQQWGITSDATCRLCDGEDESHQHLFFGCTYASHLW 494
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 275 bits (703), Expect = 3e-71
Identities = 137/335 (40%), Positives = 200/335 (59%), Gaps = 6/335 (1%)
Frame = +1
Query: 1 FDSIS*DFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSINGGTYGLFKGQRGLRQGDPLS 180
FDS+ FL +V LGFP F+ WI C++T S+S+ +NG G F+ RGLRQG LS
Sbjct: 604 FDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQVNGELAGYFQSSRGLRQGCALS 663
Query: 181 PYLFVICLEYLSRLINKKTTNTHFNYHPKCGPLNITHLAFADDLMLLSRGDSISIQILMD 360
PYLFVIC++ LS++++K HF YHPKC + +THL+FADDLM+LS G SI+ ++
Sbjct: 664 PYLFVICMDVLSKMLDKAAAARHFGYHPKCKTMGLTHLSFADDLMVLSDGKIRSIERIIK 723
Query: 361 CLKDFGLKSGLQMNVLKSNIYMAGIGERETGEILEFSQLVPGTMPFRYLGVPLAAERLKV 540
+F SGL++++ KS +Y+AG+ E+ + G +P RYLG+PL +RL
Sbjct: 724 VFDEFAKWSGLRISLEKSTVYLAGLSATARNEVADRFPFSSGQLPVRYLGLPLITKRLST 783
Query: 541 VYFEPLMDKIRSYINGWSGPTLSYAGRTELIRSVLQGVASFWISIFPLPDQVRKNVIKLC 720
PL++++R I W+ LSYAGR LI SVL + +FW++ F LP + + + K+C
Sbjct: 784 TDCLPLLEQVRKRIGSWTSRFLSYAGRLNLISSVLWSICNFWLAAFRLPRKCIRELEKMC 843
Query: 721 RNFLW-----GSKKACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWY 885
FLW S KA ++W C PK EGGLGLR +K N K++ I ++ +LW
Sbjct: 844 SAFLWSGTEMNSNKAKISWHMVCKPKDEGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWV 903
Query: 886 RWIHHYYLRNRSIWDWNVHTSDSPLI-KNILRIRD 987
+W+ + LRN S W+ S I K +L+ R+
Sbjct: 904 KWVDQHLLRNASFWEVKQTVSQGSWIWKKLLKYRE 938
Score = 58.5 bits (140), Expect = 6e-06
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +1
Query: 1069 TRDAYETFRPHGNNVCWKSVIWGPSIPPKHSFIMWLCILGRLKTKNR-LGFMDIENDTCV 1245
TRD + R V W VIW PK+SF WL GRL T +R + + + C+
Sbjct: 1040 TRDTWHHTRSTSARVPWHKVIWFSHATPKYSFCSWLAAHGRLPTGDRMINWANGIATDCI 1099
Query: 1246 FCGEQQESIYHLYFECTFCKQVW 1314
FC E+ HL+F C+F +W
Sbjct: 1100 FCQGTLETRDHLFFTCSFTSVIW 1122
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 271 bits (694), Expect = 4e-70
Identities = 135/335 (40%), Positives = 200/335 (59%), Gaps = 7/335 (2%)
Frame = +1
Query: 1 FDSIS*DFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSINGGTYGLFKGQRGLRQGDPLS 180
FDS+ +F+ L L P +++WI +C++T S+++S+NG T G F+ +GLRQGDPLS
Sbjct: 458 FDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLS 517
Query: 181 PYLFVICLEYLSRLINKKTTNTHFNYHPKCGPLNITHLAFADDLMLLSRGDSISIQILMD 360
PYLFV+ +E S+L+ + + + +YHPK G L+I+HL FADD+M+ G S S+ + +
Sbjct: 518 PYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICE 577
Query: 361 CLKDFGLKSGLQMNVLKSNIYMAG--IGERETGEILEFSQLVPGTMPFRYLGVPLAAERL 534
L DF SGL++N KS ++ AG + ER T F GT P RYLG+PL +L
Sbjct: 578 TLDDFADWSGLKVNKDKSQLFQAGLDLSERITSAAYGFP---AGTFPIRYLGLPLMCRKL 634
Query: 535 KVVYFEPLMDKIRSYINGWSGPTLSYAGRTELIRSVLQGVASFWISIFPLPDQVRKNVIK 714
++ + PL++K+ + + W LS+AGRT+LI SV+ G+ +FW+S F LP K +
Sbjct: 635 RIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIES 694
Query: 715 LCRNFLW-----GSKKACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTL 879
LC FLW G K + V+W CCLPK EGGLG R WN LL +++ + +L
Sbjct: 695 LCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSL 754
Query: 880 WYRWIHHYYLRNRSIWDWNVHTSDSPLIKNILRIR 984
W +W H+ L + S W N +D K +L +R
Sbjct: 755 WAQWQRHHRLGHASFWQVNALQTDPWTWKMLLNLR 789
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 271 bits (694), Expect = 4e-70
Identities = 136/354 (38%), Positives = 202/354 (57%), Gaps = 6/354 (1%)
Frame = +1
Query: 1 FDSIS*DFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSINGGTYGLFKGQRGLRQGDPLS 180
FDS+ FL + L L FP F WI C+ST ++S+ +NG G F +RGLRQG LS
Sbjct: 177 FDSVQWQFLLNTLEALNFPENFCHWIKLCISTATFSVQVNGELAGFFGSKRGLRQGCALS 236
Query: 181 PYLFVICLEYLSRLINKKTTNTHFNYHPKCGPLNITHLAFADDLMLLSRGDSISIQILMD 360
PYLFVIC+ LS +I+ + + YHPKC L++THL FADDLM+ G S++ +++
Sbjct: 237 PYLFVICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVIN 296
Query: 361 CLKDFGLKSGLQMNVLKSNIYMAGIGERETGEILEFSQLVPGTMPFRYLGVPLAAERLKV 540
K+F KSGL +++ KS +Y+AG+ E IL G +P RYLG+PL +++
Sbjct: 297 IFKEFAGKSGLHISLEKSTLYLAGVSELNRNNILSAFPFASGQLPVRYLGLPLLTKQMTT 356
Query: 541 VYFEPLMDKIRSYINGWSGPTLSYAGRTELIRSVLQGVASFWISIFPLPDQVRKNVIKLC 720
+ PL+DK+RS I+ W+ +LSYAGR LI SV+ +++FW+S + LP K + KLC
Sbjct: 357 ADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLC 416
Query: 721 RNFLWGS-----KKACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWY 885
FLW KKA + W + C K EGGLG++ + N K++ + + + +LW
Sbjct: 417 SAFLWSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWV 476
Query: 886 RWIHHYYLRNRSIWDWNVHTS-DSPLIKNILRIRDRLIDTCGSQQSAEQKIEYW 1044
W+ Y +R S W N +S S + K +L+ RD C + + +W
Sbjct: 477 NWVWTYIIRKGSFWSANDRSSLGSWMWKKLLKYRDVAKSMCKVEIKSGSSTSFW 530
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 271 bits (694), Expect = 4e-70
Identities = 135/335 (40%), Positives = 200/335 (59%), Gaps = 7/335 (2%)
Frame = +1
Query: 1 FDSIS*DFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSINGGTYGLFKGQRGLRQGDPLS 180
FDS+ +F+ L L P +++WI +C++T S+++S+NG T G F+ +GLRQGDPLS
Sbjct: 458 FDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLS 517
Query: 181 PYLFVICLEYLSRLINKKTTNTHFNYHPKCGPLNITHLAFADDLMLLSRGDSISIQILMD 360
PYLFV+ +E S+L+ + + + +YHPK G L+I+HL FADD+M+ G S S+ + +
Sbjct: 518 PYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICE 577
Query: 361 CLKDFGLKSGLQMNVLKSNIYMAG--IGERETGEILEFSQLVPGTMPFRYLGVPLAAERL 534
L DF SGL++N KS ++ AG + ER T F GT P RYLG+PL +L
Sbjct: 578 TLDDFADWSGLKVNKDKSQLFQAGLDLSERITSAAYGFP---AGTFPIRYLGLPLMCRKL 634
Query: 535 KVVYFEPLMDKIRSYINGWSGPTLSYAGRTELIRSVLQGVASFWISIFPLPDQVRKNVIK 714
++ + PL++K+ + + W LS+AGRT+LI SV+ G+ +FW+S F LP K +
Sbjct: 635 RIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIES 694
Query: 715 LCRNFLW-----GSKKACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTL 879
LC FLW G K + V+W CCLPK EGGLG R WN LL +++ + +L
Sbjct: 695 LCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSL 754
Query: 880 WYRWIHHYYLRNRSIWDWNVHTSDSPLIKNILRIR 984
W +W H+ L + S W N +D K +L +R
Sbjct: 755 WAQWQRHHRLGHASFWQVNALQTDPWTWKMLLNLR 789
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 271 bits (692), Expect = 6e-70
Identities = 139/353 (39%), Positives = 204/353 (57%), Gaps = 5/353 (1%)
Frame = +1
Query: 1 FDSIS*DFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSINGGTYGLFKGQRGLRQGDPLS 180
FDS+ +F+ L L P F++WI +C+ST ++++SINGG G FK +GLRQGDPLS
Sbjct: 598 FDSVRWEFVIAALRALAIPEKFINWISQCISTPTFTVSINGGNGGFFKSTKGLRQGDPLS 657
Query: 181 PYLFVICLEYLSRLINKKTTNTHFNYHPKCGPLNITHLAFADDLMLLSRGDSISIQILMD 360
PYLFV+ +E S L++ + + +YHPK L+I+HL FADD+M+ G S S+ + +
Sbjct: 658 PYLFVLAMEAFSNLLHSRYESGLIHYHPKASNLSISHLMFADDVMIFFDGGSFSLHGICE 717
Query: 361 CLKDFGLKSGLQMNVLKSNIYMAGIGERETGEILEFSQLVPGTMPFRYLGVPLAAERLKV 540
L DF SGL++N KS++Y+AG+ + E+ + + GT+P RYLG+PL +L++
Sbjct: 718 TLDDFASWSGLKVNKDKSHLYLAGLNQLESNANAAYGFPI-GTLPIRYLGLPLMNRKLRI 776
Query: 541 VYFEPLMDKIRSYINGWSGPTLSYAGRTELIRSVLQGVASFWISIFPLPDQVRKNVIKLC 720
+EPL++KI + W LS+AGR +LI SV+ G +FW+S F LP K + LC
Sbjct: 777 AEYEPLLEKITARFRSWVNKCLSFAGRIQLISSVIFGSINFWMSTFLLPKGCIKRIESLC 836
Query: 721 RNFLWG-----SKKACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWY 885
FLW +K V+W CLPK EGGLGLR + WN L +++ + K +LW
Sbjct: 837 SRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWNKTLSMRLIWRLFVAKDSLWA 896
Query: 886 RWIHHYYLRNRSIWDWNVHTSDSPLIKNILRIRDRLIDTCGSQQSAEQKIEYW 1044
W H ++L S W SDS K +L +R + K +YW
Sbjct: 897 DWQHLHHLSRGSFWAVEGGQSDSWTWKRLLSLRPLAHQFLVCKVGNGLKADYW 949
Score = 62.0 bits (149), Expect = 6e-07
Identities = 32/79 (40%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +1
Query: 1081 YETFRPHGNNVCWKSVIWGPSIPPKHSFIMWLCILGRLKTKNRL-GFMDIENDTCVFCGE 1257
+E RP W S IW PK++F MW+ L RL T+ RL + I++D CV C
Sbjct: 1039 WEAIRPKATVKSWASSIWFKGAVPKYAFNMWVSHLNRLLTRQRLASWGHIQSDACVLCSF 1098
Query: 1258 QQESIYHLYFECTFCKQVW 1314
ES HL C F QVW
Sbjct: 1099 ASESRDHLLLICEFSAQVW 1117
>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|20197043|gb|AAM14892.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 1412
Score = 268 bits (685), Expect = 4e-69
Identities = 154/450 (34%), Positives = 228/450 (50%), Gaps = 11/450 (2%)
Frame = +1
Query: 1 FDSIS*DFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSINGGTYGLFKGQRGLRQGDPLS 180
FDS+ FL + L L P F+ WI C+ST S+S+ +NG LRQG LS
Sbjct: 870 FDSVQWPFLLNTLAALDIPEKFIHWINLCISTASFSVQVNG-----------LRQGCSLS 918
Query: 181 PYLFVICLEYLSRLINKKTTNTHFNYHPKCGPLNITHLAFADDLMLLSRGDSISIQILMD 360
PYLFVIC+ LS +++K F YHP+C + +THL FADD+M+ S G + S++ ++
Sbjct: 919 PYLFVICMNVLSAMLDKGAVEKRFGYHPRCRNMGLTHLCFADDIMVFSAGSAHSLEGVLA 978
Query: 361 CLKDFGLKSGLQMNVLKSNIYMAGIGERETGEILEFSQLVPGTMPFRYLGVPLAAERLKV 540
KDF SGL +++ KS ++MA I IL G++P RYLG+PL +R+ +
Sbjct: 979 IFKDFAAFSGLNISLEKSTLFMASISSETCASILARFPFDSGSLPVRYLGLPLMTKRMTL 1038
Query: 541 VYFEPLMDKIRSYINGWSGPTLSYAGRTELIRSVLQGVASFWISIFPLPDQVRKNVIKLC 720
PL++KIRS I+ W LSYAGR +L+ SV+ + FWIS F LP + + ++
Sbjct: 1039 ADCLPLLEKIRSRISSWKNRFLSYAGRLQLLNSVISSLTKFWISAFRLPRACIREIEQIS 1098
Query: 721 RNFLWGS-----KKACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWY 885
FLW KA VAW C PK EGGLGLR + N K++ + + K +LW
Sbjct: 1099 AAFLWSGTDLNPHKAKVAWHDVCKPKSEGGLGLRSLVDANKICCFKLIWRLVSAKHSLWV 1158
Query: 886 RWIHHYYLRN--RSIWDWNVHTSDSPLIKNILRIRDRLIDTCGSQQSAEQKIEYWSTGLL 1059
WI + +R ++ + ++ +I ++L+ C + + + S G
Sbjct: 1159 NWIQNNLIRTVAEALSSHRRRSHRDDILNDIEEELEKLL--CRGICTEQDRSLCRSIGGQ 1216
Query: 1060 SKC---TRDAYETFRPHGNNVCWKSVIWGPSIPPKHSFIMWLCILGRLKTKNRLGFMDIE 1230
K + + + R G W IW PK +FI WL RL T +++ +
Sbjct: 1217 FKAKFFSPEIWHQIREQGLVKQWHKAIWFSGATPKFTFISWLAAHDRLTTGDKMASWNRG 1276
Query: 1231 -NDTCVFCGEQQESIYHLYFECTFCKQVWD 1317
+ CV C ES HL+F C F +WD
Sbjct: 1277 ISSVCVLCNISAESRDHLFFSCNFSSHIWD 1306
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 267 bits (682), Expect = 9e-69
Identities = 140/353 (39%), Positives = 205/353 (58%), Gaps = 5/353 (1%)
Frame = +1
Query: 1 FDSIS*DFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSINGGTYGLFKGQRGLRQGDPLS 180
FDS+ F+ + L P FV+WI +C+++TS+S++++G G FKG +GLRQGDPLS
Sbjct: 597 FDSVGWGFIIETLKAANAPPRFVNWIKQCITSTSFSINVSGSLCGYFKGSKGLRQGDPLS 656
Query: 181 PYLFVICLEYLSRLINKKTTNTHFNYHPKCGPLNITHLAFADDLMLLSRGDSISIQILMD 360
P LFVI +E LSRL+ K ++ YHPK + I+ LAFADDLM+ G + S++ +
Sbjct: 657 PSLFVIAMEILSRLLENKFSDGSIGYHPKASEVRISSLAFADDLMIFYDGKASSLRGIKS 716
Query: 361 CLKDFGLKSGLQMNVLKSNIYMAGIGERETGEILEFSQLVPGTMPFRYLGVPLAAERLKV 540
L+ F SGL+MN KS +Y AG+ + + + L F V GT PFRYLG+PL +L+
Sbjct: 717 VLESFKNLSGLEMNTEKSAVYTAGLEDTDKEDTLAFG-FVNGTFPFRYLGLPLLHRKLRR 775
Query: 541 VYFEPLMDKIRSYINGWSGPTLSYAGRTELIRSVLQGVASFWISIFPLPDQVRKNVIKLC 720
+ L+DKI + N W+ TLS+AGR +LI SV+ +FW+S F LP K + ++C
Sbjct: 776 SDYSQLIDKIAARFNHWATKTLSFAGRLQLISSVIYSTVNFWLSSFILPKCCLKTIEQMC 835
Query: 721 RNFLWGSK-----KACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWY 885
FLWG+ V+W+ CLPK EGGLGLR+ +WN L +++ + A + +LW
Sbjct: 836 NRFLWGNDITRRGDIKVSWQNSCLPKAEGGLGLRNFWTWNKTLNLRLIWMLFARRDSLWV 895
Query: 886 RWIHHYYLRNRSIWDWNVHTSDSPLIKNILRIRDRLIDTCGSQQSAEQKIEYW 1044
W H LR+ + W+ + S + K IL +R Q + YW
Sbjct: 896 AWNHANRLRHVNFWNAEAASHHSWIWKAILGLRPLAKRFLRGAVGNGQLLSYW 948
>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|7267919|emb|CAB78261.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 662
Score = 265 bits (677), Expect = 3e-68
Identities = 134/334 (40%), Positives = 198/334 (59%), Gaps = 5/334 (1%)
Frame = +1
Query: 1 FDSIS*DFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSINGGTYGLFKGQRGLRQGDPLS 180
FDS+ FLR+VL+ L FP FV WIM CV+T S+S+ +N G F RGLRQG L+
Sbjct: 122 FDSVQWSFLRNVLLTLDFPQEFVHWIMLCVTTASFSVQVNRELAGYFNSLRGLRQGCSLT 181
Query: 181 PYLFVICLEYLSRLINKKTTNTHFNYHPKCGPLNITHLAFADDLMLLSRGDSISIQILMD 360
PYLFVI ++ LS+ +++ F YHPKC L +THL+FADD+M+L+ G S++ +++
Sbjct: 182 PYLFVIVMDVLSKKLDRAAGLRKFGYHPKCKNLGLTHLSFADDIMVLTDGKLRSLEGIVE 241
Query: 361 CLKDFGLKSGLQMNVLKSNIYMAGIGERETGEILEFSQLVPGTMPFRYLGVPLAAERLKV 540
F +SGL++++ K+ IY AGI + E + G +P RYL +PL +R
Sbjct: 242 VFDSFAKQSGLKISMAKTTIYFAGISKSVCKEFEDQFHFAVGRLPVRYLCLPLVTKRFTS 301
Query: 541 VYFEPLMDKIRSYINGWSGPTLSYAGRTELIRSVLQGVASFWISIFPLPDQVRKNVIKLC 720
+ PL+++I+ I W+ LSYAGR L+ SVL + +FW+S F LP + + + KLC
Sbjct: 302 QDYSPLLEQIKRRIGTWTARFLSYAGRLNLVSSVLWSICNFWLSAFRLPRECVREIDKLC 361
Query: 721 RNFLW-----GSKKACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWY 885
FLW + KA +AW+T C PK EGGLGL+ IK N K++ I + +LW
Sbjct: 362 SAFLWSGPELSTNKAKIAWETVCRPKREGGLGLQSIKEANDVCCLKLIWRIVSQGDSLWV 421
Query: 886 RWIHHYYLRNRSIWDWNVHTSDSPLIKNILRIRD 987
+WI Y L+ + W + + S + K +L+ RD
Sbjct: 422 QWIRTYLLKRNTFWSFRSASQGSWMWKKLLKYRD 455
>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1277
Score = 265 bits (677), Expect = 3e-68
Identities = 135/354 (38%), Positives = 198/354 (55%), Gaps = 6/354 (1%)
Frame = +1
Query: 1 FDSIS*DFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSINGGTYGLFKGQRGLRQGDPLS 180
FDS+ FL + L L FP F WI C+ST ++S+ +N G F +RGLRQG LS
Sbjct: 746 FDSVQWQFLLNTLEALKFPEKFRHWIKLCISTATFSVQVNSEQAGFFGSKRGLRQGCALS 805
Query: 181 PYLFVICLEYLSRLINKKTTNTHFNYHPKCGPLNITHLAFADDLMLLSRGDSISIQILMD 360
PYLFVIC+ LS +I+ + + YHPKC L++THL FADDLM+ G S++ +++
Sbjct: 806 PYLFVICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVIN 865
Query: 361 CLKDFGLKSGLQMNVLKSNIYMAGIGERETGEILEFSQLVPGTMPFRYLGVPLAAERLKV 540
KDF KSGL +++ KS +Y+A + E IL G +P RYLG PL +++
Sbjct: 866 IFKDFAGKSGLHISLEKSTLYLAEVSELNRNNILSAFPFASGQLPVRYLGFPLLTKQMTT 925
Query: 541 VYFEPLMDKIRSYINGWSGPTLSYAGRTELIRSVLQGVASFWISIFPLPDQVRKNVIKLC 720
+ PL+DK+RS I+ W+ +LSYAGR LI SV+ +++FW+S + LP K + KLC
Sbjct: 926 ADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLC 985
Query: 721 RNFLWGS-----KKACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWY 885
FLW KKA + W + C K EGGLG++ + N K++ + + + +LW
Sbjct: 986 SAFLWSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWV 1045
Query: 886 RWIHHYYLRNRSIWDWNVHTS-DSPLIKNILRIRDRLIDTCGSQQSAEQKIEYW 1044
W+ Y +R S W N +S S + K +L RD C + + +W
Sbjct: 1046 NWVWTYIIRKGSFWSANDRSSLGSWMWKKLLNYRDVAKSMCKVEIKSGSSTSFW 1099
>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 489
Score = 264 bits (674), Expect = 7e-68
Identities = 133/337 (39%), Positives = 196/337 (58%), Gaps = 6/337 (1%)
Frame = +1
Query: 52 FPHLFVSWIMECVSTTSYSLSINGGTYGLFKGQRGLRQGDPLSPYLFVICLEYLSRLINK 231
FP +F+ WIM CV+T S+ + +NG G F RGLRQG LSPYLFV+ + LS+L++K
Sbjct: 3 FPPVFIHWIMLCVTTASFLVQVNGELAGYFNSTRGLRQGCSLSPYLFVVSMNVLSKLLDK 62
Query: 232 KTTNTHFNYHPKCGPLNITHLAFADDLMLLSRGDSISIQILMDCLKDFGLKSGLQMNVLK 411
T F YHP+C + +THL+FADDLM+LS G SI+ +++ + F SGL++++ K
Sbjct: 63 ATGQRRFGYHPRCKQMGLTHLSFADDLMVLSDGKVRSIEGIVEVFETFAKCSGLRISMEK 122
Query: 412 SNIYMAGIGERETGEILEFSQLVPGTMPFRYLGVPLAAERLKVVYFEPLMDKIRSYINGW 591
S +Y AG+ E++ GT+P RYLG+PL ++L + PL++ I+ I W
Sbjct: 123 STVYFAGLSHTSPQEVMAHFPFAVGTLPVRYLGLPLVTKQLSSTDYLPLIEHIKKKIGSW 182
Query: 592 SGPTLSYAGRTELIRSVLQGVASFWISIFPLPDQVRKNVIKLCRNFLW-----GSKKACV 756
S LSYAGR LI SVL + +FW+ F LP + + + K+C +LW + KA +
Sbjct: 183 SARFLSYAGRLNLISSVLWSICNFWMGAFRLPRECIREIDKMCSAYLWSGGDLNTSKAKI 242
Query: 757 AWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWYRWIHHYYLRNRSIWDWN 936
AW C PK EGGLGLR +K N K++ I ++ +LW +WIH L+ S W
Sbjct: 243 AWTDVCKPKDEGGLGLRSLKEANDVSCLKLIWRIISHADSLWVKWIHATLLKQVSFWAVR 302
Query: 937 VHTS-DSPLIKNILRIRDRLIDTCGSQQSAEQKIEYW 1044
+TS S + K +L+ RD I C ++ + +W
Sbjct: 303 ENTSLGSWMWKKVLKFRDAAIQLCKAEVNNGAHTFFW 339
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 261 bits (668), Expect = 4e-67
Identities = 132/336 (39%), Positives = 201/336 (59%), Gaps = 6/336 (1%)
Frame = +1
Query: 1 FDSIS*DFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSINGGTYGLFKGQRGLRQGDPLS 180
FD + FL +VL + P +F+ WI C+ T S+S+ +NG G F+ +RGLRQG LS
Sbjct: 751 FDFVQWPFLINVLKAIHLPEMFIHWIELCIGTASFSVQVNGELSGFFRSERGLRQGCSLS 810
Query: 181 PYLFVICLEYLSRLINKKTTNTHFNYHPKCGPLNITHLAFADDLMLLSRGDSISIQILMD 360
PYL+VIC+ LS +++K +YHP+C +N+THL FADD+M+ S G S SIQ +
Sbjct: 811 PYLYVICMNVLSCMLDKAAVEKKISYHPRCRNMNLTHLCFADDIMVFSDGTSKSIQGTLA 870
Query: 361 CLKDFGLKSGLQMNVLKSNIYMAGIGERETGEILEFSQLVPGTMPFRYLGVPLAAERLKV 540
+ F S L++++ KS I+MAGI IL+ GT+P +YLG+PL +R+
Sbjct: 871 IFEKFAAMSWLKISLEKSTIFMAGISPNAKTSILQQFPFELGTLPVKYLGLPLLTKRMTQ 930
Query: 541 VYFEPLMDKIRSYINGWSGPTLSYAGRTELIRSVLQGVASFWISIFPLPDQVRKNVIKLC 720
+ PL++KIR+ I W+ LS+AGR +LI+SVL + +FW+S+F LP + + K+
Sbjct: 931 SDYLPLVEKIRARITSWTNRFLSFAGRLQLIKSVLSSITNFWLSVFRLPKACLQEIEKMF 990
Query: 721 RNFLW-----GSKKACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWY 885
FLW +KKA +AW C K EGGLGL+ +K N L K++ I + + +LW
Sbjct: 991 SAFLWSGPDLNTKKAKIAWSEVCKLKEEGGLGLKPLKEANEVSLLKLIWRILSARDSLWV 1050
Query: 886 RWIHHYYLRNRSIWDWNVHTS-DSPLIKNILRIRDR 990
+W++ + +R + W +T S L + IL+ RD+
Sbjct: 1051 KWVNKHLIRKETFWSVKENTGLGSWLWRKILKQRDK 1086
Score = 58.5 bits (140), Expect = 6e-06
Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 1/181 (0%)
Frame = +1
Query: 775 LPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWYRWIHHYYLRNRSIWDWNVHTSDS 954
L +H G G D+ N+A +A+++ N H K+ H N+
Sbjct: 1114 LHQHMGSRGTIDLGIPNNATVAEVM-NTHRRKR-------HRADFLNQ------------ 1153
Query: 955 PLIKNILRIRDRLIDTCGSQQSAEQKIEYWSTGLLSKCTRDAYETFRPHGNNVCWKSVIW 1134
IK+ + + + T G + +QK + + + S T ++ R W +W
Sbjct: 1154 --IKSQIELARQDRSTDGDRSLWKQKEDTFKSSFSSSKT---WQQIRSISLRCDWYRGVW 1208
Query: 1135 GPSIPPKHSFIMWLCILGRLKTKNRL-GFMDIENDTCVFCGEQQESIYHLYFECTFCKQV 1311
+ PK+SF+ WL RL T +++ + CVFCGE+ E+ HL+F C + V
Sbjct: 1209 FSASTPKYSFVTWLAFHNRLTTSDKICKWNSGARYDCVFCGEELETRDHLFFSCPYSSHV 1268
Query: 1312 W 1314
W
Sbjct: 1269 W 1269