BLASTX nr result
ID: Rehmannia25_contig00012056
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00012056
(939 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002320305.2| hypothetical protein POPTR_0014s11650g, part... 375 e-101
emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera] 374 e-101
ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containi... 373 e-101
gb|EXB53232.1| hypothetical protein L484_007175 [Morus notabilis] 361 3e-97
ref|XP_006347731.1| PREDICTED: pentatricopeptide repeat-containi... 358 2e-96
gb|EOY32024.1| Pentatricopeptide repeat (PPR) superfamily protei... 352 1e-94
ref|XP_004486276.1| PREDICTED: pentatricopeptide repeat-containi... 351 3e-94
ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containi... 350 3e-94
ref|XP_002515292.1| pentatricopeptide repeat-containing protein,... 350 4e-94
ref|XP_004230081.1| PREDICTED: pentatricopeptide repeat-containi... 349 1e-93
ref|XP_006595405.1| PREDICTED: pentatricopeptide repeat-containi... 348 2e-93
ref|NP_191806.1| pentatricopeptide repeat-containing protein [Ar... 340 6e-91
ref|XP_006827738.1| hypothetical protein AMTR_s00009p00261890 [A... 340 6e-91
gb|ESW20009.1| hypothetical protein PHAVU_006G173400g [Phaseolus... 338 2e-90
gb|ESW20008.1| hypothetical protein PHAVU_006G173400g [Phaseolus... 338 2e-90
ref|NP_191813.1| pentatricopeptide repeat-containing protein [Ar... 337 3e-90
emb|CAB82968.1| putative protein [Arabidopsis thaliana] 337 3e-90
ref|XP_002878464.1| pentatricopeptide repeat-containing protein ... 337 3e-90
ref|NP_196986.1| pentatricopeptide repeat-containing protein [Ar... 337 3e-90
ref|XP_006492325.1| PREDICTED: pentatricopeptide repeat-containi... 335 2e-89
>ref|XP_002320305.2| hypothetical protein POPTR_0014s11650g, partial [Populus trichocarpa]
gi|550324008|gb|EEE98620.2| hypothetical protein
POPTR_0014s11650g, partial [Populus trichocarpa]
Length = 614
Score = 375 bits (962), Expect = e-101
Identities = 176/237 (74%), Positives = 207/237 (87%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
KK SDAIK FEVMK+KGP P+ RSYTILI+DLCK M+EA+ YFY+M++SGC PDAA+Y
Sbjct: 364 KKRSDAIKFFEVMKAKGPSPDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAVY 423
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
TCLMTG+ N K+MDMVY LLKEMKEKGC PDG+TYNALIK+M +++MPDDAV+IYKKMIQ
Sbjct: 424 TCLMTGYGNHKRMDMVYELLKEMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRIYKKMIQ 483
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNE 542
+ I+PSIH+YNMIMKSYF RN EMG+AVW+EM +KG CPD+NSYTV IGGLI QGRS E
Sbjct: 484 NGIEPSIHSYNMIMKSYFRIRNYEMGHAVWDEMSKKGFCPDDNSYTVFIGGLISQGRSEE 543
Query: 543 ACKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSGNSEVANLFVR 713
ACKYLEEMI+KGMKAPQLDY K ADFSRAG+ +ILE+LAQ+MKFSG EV+N+F R
Sbjct: 544 ACKYLEEMIEKGMKAPQLDYNKFAADFSRAGKPDILEELAQKMKFSGKFEVSNVFAR 600
Score = 105 bits (261), Expect = 3e-20
Identities = 56/190 (29%), Positives = 94/190 (49%)
Frame = +3
Query: 60 PNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIYTCLMTGFANQKKMDMVYRL 239
PN R+YT+L+ C+ N+ EA + +ML+ G +PD + ++ G KK +
Sbjct: 313 PNLRTYTVLLNGWCRVKNLMEAGRIWNEMLDEGFKPDIVTHNIMLEGLLRSKKRSDAIKF 372
Query: 240 LKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQSDIKPSIHTYNMIMKSYFI 419
+ MK KG PD R+Y LI+ + + +AV + +M+ S P Y +M Y
Sbjct: 373 FEVMKAKGPSPDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAVYTCLMTGYGN 432
Query: 420 ARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNEACKYLEEMIDKGMKAPQLD 599
+ +M Y + +EMK KGC PD +Y LI + Q ++A + ++MI G++
Sbjct: 433 HKRMDMVYELLKEMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRIYKKMIQNGIEPSIHS 492
Query: 600 YKKLKADFSR 629
Y + + R
Sbjct: 493 YNMIMKSYFR 502
Score = 73.2 bits (178), Expect = 1e-10
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Frame = +3
Query: 270 PDGRTYNALIKMMANRQMPDDAVKIYKKMIQSDIKPSIHTYNMIMKSYFIARNCEMGYAV 449
P+ RTY L+ + +A +I+ +M+ KP I T+N++++ ++
Sbjct: 313 PNLRTYTVLLNGWCRVKNLMEAGRIWNEMLDEGFKPDIVTHNIMLEGLLRSKKRSDAIKF 372
Query: 450 WEEMKRKGCCPDENSYTVLIGGLIRQGRSNEACKYLEEMIDKGMKAPQLDYKKLKADFSR 629
+E MK KG PD SYT+LI L +Q + EA Y EM+D G Y L +
Sbjct: 373 FEVMKAKGPSPDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAVYTCLMTGYGN 432
Query: 630 AGRVNILEDLAQRMKFSG---NSEVANLFVRLM 719
R++++ +L + MK G + + N ++LM
Sbjct: 433 HKRMDMVYELLKEMKEKGCPPDGKTYNALIKLM 465
>emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
Length = 927
Score = 374 bits (961), Expect = e-101
Identities = 181/252 (71%), Positives = 215/252 (85%), Gaps = 3/252 (1%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
KK SDAIKLFEVMK+KGP PN R+YTILI+DLCK M+EA++YF +M++SGC+PDAA+Y
Sbjct: 421 KKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMKEAVEYFDEMVDSGCQPDAAVY 480
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
TCL+TGF NQKKMD VY LLKEMKEKGC DGRTYNALIK+M NRQMPDDAV+IYKKMIQ
Sbjct: 481 TCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQ 540
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNE 542
+ I+P++HTYNM+MKSYF RN EMG AVW+EM RKGCCPD+NSY V IGGLIR GRS E
Sbjct: 541 NGIQPTLHTYNMMMKSYFYTRNYEMGCAVWKEMGRKGCCPDDNSYIVFIGGLIRHGRSEE 600
Query: 543 ACKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSGNSEVANLFVR--- 713
AC+YLEEMI+KGMKAPQLDY K ADFSRAG+ +ILE+LA++MKF G EV+N+F R
Sbjct: 601 ACRYLEEMIEKGMKAPQLDYNKFAADFSRAGKPDILEELARKMKFEGKFEVSNVFARWAE 660
Query: 714 LMR**RQVK*RD 749
+M+ ++VK RD
Sbjct: 661 MMK--KRVKRRD 670
Score = 98.6 bits (244), Expect = 3e-18
Identities = 55/203 (27%), Positives = 103/203 (50%)
Frame = +3
Query: 15 DAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIYTCLM 194
+A LFE ++ + PN R+YT+L+ C+ N+ EA + +M++ G +PD + ++
Sbjct: 356 EAQALFEKLEDRFT-PNLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTML 414
Query: 195 TGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQSDIK 374
G KK +L + MK KG P+ RTY LI+ + + +AV+ + +M+ S +
Sbjct: 415 EGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMKEAVEYFDEMVDSGCQ 474
Query: 375 PSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNEACKY 554
P Y ++ + + + YA+ +EMK KGC D +Y LI + + ++A +
Sbjct: 475 PDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRI 534
Query: 555 LEEMIDKGMKAPQLDYKKLKADF 623
++MI G++ Y + +
Sbjct: 535 YKKMIQNGIQPTLHTYNMMMKSY 557
Score = 71.2 bits (173), Expect = 5e-10
Identities = 54/230 (23%), Positives = 100/230 (43%), Gaps = 3/230 (1%)
Frame = +3
Query: 39 MKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIYTCLMTGFANQKK 218
M KG L +++I IK ++A+ F M + CL+ K
Sbjct: 295 MGEKGLL-TMETFSIAIKAFAAAKERKKAVGVFELMKRYNFDAGVDTINCLLDNLGRAKL 353
Query: 219 MDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQSDIKPSIHTYNM 398
L ++++++ P+ RTY L+ + +A + + +MI KP I ++
Sbjct: 354 GKEAQALFEKLEDR-FTPNLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHT 412
Query: 399 IMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNEACKYLEEMIDKG 578
+++ + ++E MK KG P+ +YT+LI L +Q + EA +Y +EM+D G
Sbjct: 413 MLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMKEAVEYFDEMVDSG 472
Query: 579 MKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSG---NSEVANLFVRLM 719
+ Y L F +++ + L + MK G + N ++LM
Sbjct: 473 CQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKLM 522
>ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Vitis vinifera]
Length = 679
Score = 373 bits (958), Expect = e-101
Identities = 181/252 (71%), Positives = 214/252 (84%), Gaps = 3/252 (1%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
KK SDAIKLFEVMK+KGP PN R+YTILI+DLCK M+EA++YF +M++SGC+PDAA+Y
Sbjct: 421 KKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVY 480
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
TCL+TGF NQKKMD VY LLKEMKEKGC DGRTYNALIK+M NRQMPDDAV+IYKKMIQ
Sbjct: 481 TCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQ 540
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNE 542
+ I+ ++HTYNM+MKSYF RN EMG AVWEEM RKGCCPD+NSY V IGGLIR GRS E
Sbjct: 541 NGIQSTLHTYNMMMKSYFYTRNYEMGCAVWEEMGRKGCCPDDNSYIVFIGGLIRHGRSEE 600
Query: 543 ACKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSGNSEVANLFVR--- 713
AC+YLEEMI+KGMKAPQLDY K ADFSRAG+ +ILE+LA++MKF G EV+N+F R
Sbjct: 601 ACRYLEEMIEKGMKAPQLDYNKFAADFSRAGKPDILEELARKMKFEGKFEVSNVFARWAE 660
Query: 714 LMR**RQVK*RD 749
+M+ ++VK RD
Sbjct: 661 MMK--KRVKRRD 670
Score = 99.8 bits (247), Expect = 1e-18
Identities = 55/203 (27%), Positives = 104/203 (51%)
Frame = +3
Query: 15 DAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIYTCLM 194
+A LFE ++ + PN R+YT+L+ C+ N+ EA + +M++ G +PD + ++
Sbjct: 356 EAQALFEKLEDRFT-PNLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTML 414
Query: 195 TGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQSDIK 374
G KK +L + MK KG P+ RTY LI+ + + +AV+ + +M+ S +
Sbjct: 415 EGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQ 474
Query: 375 PSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNEACKY 554
P Y ++ + + + YA+ +EMK KGC D +Y LI + + ++A +
Sbjct: 475 PDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRI 534
Query: 555 LEEMIDKGMKAPQLDYKKLKADF 623
++MI G+++ Y + +
Sbjct: 535 YKKMIQNGIQSTLHTYNMMMKSY 557
Score = 71.2 bits (173), Expect = 5e-10
Identities = 54/230 (23%), Positives = 100/230 (43%), Gaps = 3/230 (1%)
Frame = +3
Query: 39 MKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIYTCLMTGFANQKK 218
M KG L +++I IK ++A+ F M + CL+ K
Sbjct: 295 MGEKGLL-TMETFSIAIKAFAAAKERKKAVGVFELMKRYNFDAGVDTINCLLDNLGRAKL 353
Query: 219 MDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQSDIKPSIHTYNM 398
L ++++++ P+ RTY L+ + +A + + +MI KP I ++
Sbjct: 354 GKEAQALFEKLEDR-FTPNLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHT 412
Query: 399 IMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNEACKYLEEMIDKG 578
+++ + ++E MK KG P+ +YT+LI L +Q + EA +Y +EM+D G
Sbjct: 413 MLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSG 472
Query: 579 MKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSG---NSEVANLFVRLM 719
+ Y L F +++ + L + MK G + N ++LM
Sbjct: 473 CQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKLM 522
>gb|EXB53232.1| hypothetical protein L484_007175 [Morus notabilis]
Length = 567
Score = 361 bits (926), Expect = 3e-97
Identities = 170/237 (71%), Positives = 201/237 (84%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
KK SDAIKLFEVMK+KGP PN R YT+LI+D CK G M+EA++ F D+L SG +PDAA+Y
Sbjct: 309 KKRSDAIKLFEVMKAKGPRPNIRCYTVLIRDFCKQGKMKEAVECFNDLLESGNQPDAAVY 368
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
TCL+TGF NQ+ MDMV+ +LKEMKEKG PDGR YNALIK+M +R+MPDDA +IYK+MIQ
Sbjct: 369 TCLVTGFGNQRNMDMVFEVLKEMKEKGHTPDGRLYNALIKLMTSRKMPDDAARIYKRMIQ 428
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNE 542
S IKP+IHTYNM+MKSYF RN EMG VW+EM +KGCCPD+NSYTV IG LIRQGRS E
Sbjct: 429 SGIKPTIHTYNMMMKSYFQRRNFEMGCVVWDEMIQKGCCPDDNSYTVFIGALIRQGRSGE 488
Query: 543 ACKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSGNSEVANLFVR 713
ACKY+EEMI+KGMKAPQLDY K ADFSRAG+ NILE+LAQ+MKF+G EV+N+F R
Sbjct: 489 ACKYIEEMIEKGMKAPQLDYNKFAADFSRAGKPNILEELAQKMKFAGKFEVSNVFAR 545
Score = 101 bits (252), Expect = 4e-19
Identities = 61/206 (29%), Positives = 105/206 (50%), Gaps = 1/206 (0%)
Frame = +3
Query: 15 DAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIYTCLM 194
+A LFE +K G PN ++YT+L+ C+ N+ EA + +M+++G +PD +T ++
Sbjct: 244 EAQVLFEKLKG-GFTPNLQTYTVLLNGWCRVKNLMEAGRLWNEMIDAGFKPDVVAHTIML 302
Query: 195 TGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQSDIK 374
G KK +L + MK KG P+ R Y LI+ + +AV+ + +++S +
Sbjct: 303 EGLLRSKKRSDAIKLFEVMKAKGPRPNIRCYTVLIRDFCKQGKMKEAVECFNDLLESGNQ 362
Query: 375 PSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNEACKY 554
P Y ++ + RN +M + V +EMK KG PD Y LI + + ++A +
Sbjct: 363 PDAAVYTCLVTGFGNQRNMDMVFEVLKEMKEKGHTPDGRLYNALIKLMTSRKMPDDAARI 422
Query: 555 LEEMIDKGMKAPQLDYK-KLKADFSR 629
+ MI G+K Y +K+ F R
Sbjct: 423 YKRMIQSGIKPTIHTYNMMMKSYFQR 448
Score = 66.2 bits (160), Expect = 2e-08
Identities = 48/240 (20%), Positives = 108/240 (45%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
++ + + E M+ KG L ++ I IK ++A+ F M + +
Sbjct: 171 RQFETMVSMLEEMREKGEL-TMETFMIAIKAFADAKERKKAVGMFELMKKYKFKVGVDTF 229
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
L+ + ++ ++L E + G P+ +TY L+ + +A +++ +MI
Sbjct: 230 NFLLDTLG-KARLGKEAQVLFEKLKGGFTPNLQTYTVLLNGWCRVKNLMEAGRLWNEMID 288
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNE 542
+ KP + + ++++ ++ ++E MK KG P+ YTVLI +QG+ E
Sbjct: 289 AGFKPDVVAHTIMLEGLLRSKKRSDAIKLFEVMKAKGPRPNIRCYTVLIRDFCKQGKMKE 348
Query: 543 ACKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSGNSEVANLFVRLMR 722
A + ++++ G + Y L F ++++ ++ + MK G++ L+ L++
Sbjct: 349 AVECFNDLLESGNQPDAAVYTCLVTGFGNQRNMDMVFEVLKEMKEKGHTPDGRLYNALIK 408
Score = 60.1 bits (144), Expect = 1e-06
Identities = 45/218 (20%), Positives = 92/218 (42%), Gaps = 34/218 (15%)
Frame = +3
Query: 168 DAAIYTCLMTGFANQKKMDMVYRLLKEMKEKG------------CLPDGR---------- 281
D+ Y +M ++ + + +L+EM+EKG D +
Sbjct: 156 DSRTYNSMMNILGKTRQFETMVSMLEEMREKGELTMETFMIAIKAFADAKERKKAVGMFE 215
Query: 282 ------------TYNALIKMMANRQMPDDAVKIYKKMIQSDIKPSIHTYNMIMKSYFIAR 425
T+N L+ + ++ +A +++K ++ P++ TY +++ + +
Sbjct: 216 LMKKYKFKVGVDTFNFLLDTLGKARLGKEAQVLFEK-LKGGFTPNLQTYTVLLNGWCRVK 274
Query: 426 NCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNEACKYLEEMIDKGMKAPQLDYK 605
N +W EM G PD ++T+++ GL+R + ++A K E M KG + Y
Sbjct: 275 NLMEAGRLWNEMIDAGFKPDVVAHTIMLEGLLRSKKRSDAIKLFEVMKAKGPRPNIRCYT 334
Query: 606 KLKADFSRAGRVNILEDLAQRMKFSGNSEVANLFVRLM 719
L DF + G++ + + SGN A ++ L+
Sbjct: 335 VLIRDFCKQGKMKEAVECFNDLLESGNQPDAAVYTCLV 372
>ref|XP_006347731.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Solanum tuberosum]
Length = 687
Score = 358 bits (918), Expect = 2e-96
Identities = 170/237 (71%), Positives = 201/237 (84%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
KK SDAIKLFEVMK+KGP PN RSYTILI+DLCK G M+EA+ F +ML+SGCE DAA +
Sbjct: 436 KKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAVAGFEEMLSSGCEADAATF 495
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
TCL+TGF N+KKMD V+ LL+EMKEKGC PD R YNALIK++ NR+MPDDAV +YKKMI+
Sbjct: 496 TCLVTGFGNKKKMDKVFALLREMKEKGCPPDARLYNALIKLIINRRMPDDAVTLYKKMIR 555
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNE 542
+ I+P+IHTYNM+MKS+F+ +N +M +A WEEM +GCCPDENSYTV IGGLI QGRS E
Sbjct: 556 NGIQPTIHTYNMLMKSFFMTKNYDMAHATWEEMSLRGCCPDENSYTVFIGGLIGQGRSME 615
Query: 543 ACKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSGNSEVANLFVR 713
ACKYLEEMIDKGMKAPQLDY K ADFSR GR +ILE+LA+RMKFSG EV++LF R
Sbjct: 616 ACKYLEEMIDKGMKAPQLDYNKFAADFSRGGRPDILEELAKRMKFSGKFEVSSLFAR 672
Score = 94.7 bits (234), Expect = 4e-17
Identities = 57/223 (25%), Positives = 107/223 (47%)
Frame = +3
Query: 15 DAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIYTCLM 194
+A LFE ++ + PN +YT+L+ C+ N+ +A + +M++ G +PD + ++
Sbjct: 371 EAQLLFEKLEHRFT-PNLLTYTVLLNGWCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTML 429
Query: 195 TGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQSDIK 374
G KK +L + MK KG P+ R+Y LI+ + + D+AV +++M+ S +
Sbjct: 430 EGLLKCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAVAGFEEMLSSGCE 489
Query: 375 PSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNEACKY 554
T+ ++ + + + +A+ EMK KGC PD Y LI +I + ++A
Sbjct: 490 ADAATFTCLVTGFGNKKKMDKVFALLREMKEKGCPPDARLYNALIKLIINRRMPDDAVTL 549
Query: 555 LEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSG 683
++MI G++ Y L F ++ + M G
Sbjct: 550 YKKMIRNGIQPTIHTYNMLMKSFFMTKNYDMAHATWEEMSLRG 592
Score = 77.4 bits (189), Expect = 7e-12
Identities = 61/240 (25%), Positives = 104/240 (43%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
++ + + E M KG L ++ I +K ++AI F M +
Sbjct: 298 RQFETMVSVLEEMGEKGLL-TMEAFLISMKAFAAAKERKKAIGMFELMKKYKFKVGVETI 356
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
CL+ + K+ +LL E E P+ TY L+ + DA K++ +MI
Sbjct: 357 NCLLDALG-RAKLGKEAQLLFEKLEHRFTPNLLTYTVLLNGWCRVKNLMDAGKVWNEMID 415
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNE 542
KP I +N +++ + ++E MK KG P+ SYT+LI L +QG+ +E
Sbjct: 416 KGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDE 475
Query: 543 ACKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSGNSEVANLFVRLMR 722
A EEM+ G +A + L F +++ + L + MK G A L+ L++
Sbjct: 476 AVAGFEEMLSSGCEADAATFTCLVTGFGNKKKMDKVFALLREMKEKGCPPDARLYNALIK 535
>gb|EOY32024.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao]
Length = 627
Score = 352 bits (903), Expect = 1e-94
Identities = 161/237 (67%), Positives = 202/237 (85%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
+K SDA+KLFEVMK+KGPLPN RSYTI+I++LCK M EA+ YF ++L+SGC+PDAA+Y
Sbjct: 369 RKRSDAVKLFEVMKAKGPLPNVRSYTIIIRELCKQAKMNEAVGYFDELLDSGCQPDAAVY 428
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
TCL+TGF NQK+MD+VYRLLKEM+EKGC PDG+TYNALIK++ ++MP+DA+++YKKMIQ
Sbjct: 429 TCLITGFGNQKRMDVVYRLLKEMQEKGCPPDGQTYNALIKLLTRQRMPEDAMRVYKKMIQ 488
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNE 542
S I+P+IHT+NMIMKS+F RN +MG A+W+EM KG CPD+N+Y V IGGLI GRS E
Sbjct: 489 SGIQPTIHTFNMIMKSFFQTRNYDMGRAIWDEMNEKGFCPDDNAYAVFIGGLISLGRSGE 548
Query: 543 ACKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSGNSEVANLFVR 713
ACK+LEEM++KGMKAP LDY K ADFSRAG+ + LEDLAQ+MKFSG E AN+F R
Sbjct: 549 ACKFLEEMMEKGMKAPHLDYNKFGADFSRAGKPDKLEDLAQKMKFSGKFEAANVFTR 605
Score = 101 bits (252), Expect = 4e-19
Identities = 55/194 (28%), Positives = 102/194 (52%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
K +A LFE ++ + PN +YTIL+ C+ N+ EA + +ML+ G +PD +
Sbjct: 300 KLAKEAQALFEKLRDRFT-PNLSTYTILLNGWCRVRNLMEAGRVWNEMLDKGFKPDIVAH 358
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
++ G +K +L + MK KG LP+ R+Y +I+ + + ++AV + +++
Sbjct: 359 NVMIEGLLRSRKRSDAVKLFEVMKAKGPLPNVRSYTIIIRELCKQAKMNEAVGYFDELLD 418
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNE 542
S +P Y ++ + + ++ Y + +EM+ KGC PD +Y LI L RQ +
Sbjct: 419 SGCQPDAAVYTCLITGFGNQKRMDVVYRLLKEMQEKGCPPDGQTYNALIKLLTRQRMPED 478
Query: 543 ACKYLEEMIDKGMK 584
A + ++MI G++
Sbjct: 479 AMRVYKKMIQSGIQ 492
Score = 79.0 bits (193), Expect = 2e-12
Identities = 62/242 (25%), Positives = 110/242 (45%), Gaps = 2/242 (0%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
K+ AI +FE+MK + L+ L + +EA ++ L P+ + Y
Sbjct: 265 KERKKAIGIFELMKKYKYKAGVDTINCLLDSLVRVKLAKEA-QALFEKLRDRFTPNLSTY 323
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
T L+ G+ + + R+ EM +KG PD +N +I+ + + DAVK+++ M
Sbjct: 324 TILLNGWCRVRNLMEAGRVWNEMLDKGFKPDIVAHNVMIEGLLRSRKRSDAVKLFEVMKA 383
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAV--WEEMKRKGCCPDENSYTVLIGGLIRQGRS 536
P++ +Y +I++ + + +M AV ++E+ GC PD YT LI G Q R
Sbjct: 384 KGPLPNVRSYTIIIRE--LCKQAKMNEAVGYFDELLDSGCQPDAAVYTCLITGFGNQKRM 441
Query: 537 NEACKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSGNSEVANLFVRL 716
+ + L+EM +KG Y L +R + ++M SG + F +
Sbjct: 442 DVVYRLLKEMQEKGCPPDGQTYNALIKLLTRQRMPEDAMRVYKKMIQSGIQPTIHTFNMI 501
Query: 717 MR 722
M+
Sbjct: 502 MK 503
>ref|XP_004486276.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cicer arietinum]
Length = 685
Score = 351 bits (900), Expect = 3e-94
Identities = 162/234 (69%), Positives = 198/234 (84%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
+K SD+IKLFEVMK+KGP PN SYTILI+DLCK M EA+DYF +M++ GC+PD A+Y
Sbjct: 427 RKKSDSIKLFEVMKAKGPSPNVHSYTILIQDLCKQKMMREAVDYFDEMVDRGCQPDVALY 486
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
TCL+TGF QKKMD+VY LLKEM+E+GC PDGRTYNALIK+M ++ MPDDAV++Y+KMIQ
Sbjct: 487 TCLITGFGKQKKMDIVYDLLKEMRERGCPPDGRTYNALIKLMVSQHMPDDAVRVYRKMIQ 546
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNE 542
S I+P+IHTYNMIMKSYF+ +N EMG AVW+EM+ KGCCPD+NSY V IGGLIRQGR +E
Sbjct: 547 SGIEPTIHTYNMIMKSYFVTKNYEMGRAVWDEMRHKGCCPDDNSYIVFIGGLIRQGRPDE 606
Query: 543 ACKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSGNSEVANL 704
ACKYLEEM+ KGMKAPQLDY K ADFS+ G ILE+LA++M F+G EV+N+
Sbjct: 607 ACKYLEEMMQKGMKAPQLDYNKFAADFSKYGNPVILEELARKMNFAGKFEVSNV 660
Score = 97.8 bits (242), Expect = 5e-18
Identities = 52/194 (26%), Positives = 103/194 (53%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
K I +A +FE +K + +PN ++YTIL+ C+ N+ EA + +M++ G PD +
Sbjct: 358 KLIKEAQVVFEKLKDRF-VPNLQTYTILLNGWCRVRNLLEAGTVWNEMIDKGFMPDIVAH 416
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
++ G +K +L + MK KG P+ +Y LI+ + ++M +AV + +M+
Sbjct: 417 NIMLVGLLRCRKKSDSIKLFEVMKAKGPSPNVHSYTILIQDLCKQKMMREAVDYFDEMVD 476
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNE 542
+P + Y ++ + + ++ Y + +EM+ +GC PD +Y LI ++ Q ++
Sbjct: 477 RGCQPDVALYTCLITGFGKQKKMDIVYDLLKEMRERGCPPDGRTYNALIKLMVSQHMPDD 536
Query: 543 ACKYLEEMIDKGMK 584
A + +MI G++
Sbjct: 537 AVRVYRKMIQSGIE 550
Score = 71.6 bits (174), Expect = 4e-10
Identities = 55/242 (22%), Positives = 107/242 (44%), Gaps = 3/242 (1%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
++ + + + M KG L ++ I IK ++A+ F M +
Sbjct: 289 RQFETMVAMLDEMGEKGLL-TMETFAIAIKAFASAKERKKAVGIFDLMKKYKFKVGVDAV 347
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
L+ K + + +++K++ +P+ +TY L+ + +A ++ +MI
Sbjct: 348 NFLLDSLCAAKLIKEAQVVFEKLKDR-FVPNLQTYTILLNGWCRVRNLLEAGTVWNEMID 406
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNE 542
P I +N+++ R ++E MK KG P+ +SYT+LI L +Q E
Sbjct: 407 KGFMPDIVAHNIMLVGLLRCRKKSDSIKLFEVMKAKGPSPNVHSYTILIQDLCKQKMMRE 466
Query: 543 ACKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSG---NSEVANLFVR 713
A Y +EM+D+G + Y L F + +++I+ DL + M+ G + N ++
Sbjct: 467 AVDYFDEMVDRGCQPDVALYTCLITGFGKQKKMDIVYDLLKEMRERGCPPDGRTYNALIK 526
Query: 714 LM 719
LM
Sbjct: 527 LM 528
>ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
gi|449490811|ref|XP_004158714.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
Length = 621
Score = 350 bits (899), Expect = 3e-94
Identities = 166/237 (70%), Positives = 195/237 (82%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
KK SDAIKLFEVMK+KGP P+ +SYTIL++D CK M+EA+ YF +M +GC PDAAIY
Sbjct: 361 KKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIY 420
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
TCL+TGF NQK+MD VY LLKEMK GC PDG+TYNALIK+M N++MPDDAV+IYKKMI+
Sbjct: 421 TCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIE 480
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNE 542
+ IKP+ HTY+M+MKSYF RN EMG A W+EMK KGCCPD+NSYTV IGGLI GR E
Sbjct: 481 NGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAE 540
Query: 543 ACKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSGNSEVANLFVR 713
A KYLEEMI+KGMKAPQLDY K ADFSRAGR +ILE+LAQ+MKFSG E +N+ R
Sbjct: 541 AGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIAR 597
Score = 92.4 bits (228), Expect = 2e-16
Identities = 52/223 (23%), Positives = 105/223 (47%)
Frame = +3
Query: 15 DAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIYTCLM 194
+A+ +FE + + PN ++YT+L+ C+ N+ EA + M++ +PD + ++
Sbjct: 296 EALTIFEKLHGRFT-PNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTML 354
Query: 195 TGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQSDIK 374
G KK +L + MK KG PD ++Y L++ + +AV+ +++M + +
Sbjct: 355 EGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCR 414
Query: 375 PSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNEACKY 554
P Y ++ + + + Y + +EMK GC PD +Y LI + + ++A +
Sbjct: 415 PDAAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRI 474
Query: 555 LEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSG 683
++MI+ G+K Y + + + + MK G
Sbjct: 475 YKKMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKG 517
>ref|XP_002515292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545772|gb|EEF47276.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 533
Score = 350 bits (898), Expect = 4e-94
Identities = 167/234 (71%), Positives = 197/234 (84%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
K+ SDAIKLF VMK+KGP P+ RSYTILI+ LC+ MEEA++YF +M++SGC+PDAA+Y
Sbjct: 281 KQRSDAIKLFMVMKAKGPSPDVRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVY 340
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
TCL+TGF N+K+MDMVY LLKEMKE+GC PDG TYNALIK+M +MPDDA +IYKKM Q
Sbjct: 341 TCLITGFGNRKRMDMVYDLLKEMKEEGCPPDGLTYNALIKLMTRLKMPDDAARIYKKMTQ 400
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNE 542
S I+P+IHTYNMIMKSYF RN EMG AVW+EM RKG CPD+NSYTVLIGGLI QGRS E
Sbjct: 401 SGIEPTIHTYNMIMKSYFQTRNYEMGRAVWDEMSRKGFCPDDNSYTVLIGGLISQGRSGE 460
Query: 543 ACKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSGNSEVANL 704
ACKYLEEM++KGMKAPQLDY K AD SR G +ILE+LAQR+KFSG V+N+
Sbjct: 461 ACKYLEEMLEKGMKAPQLDYNKFGADLSRGGNPDILEELAQRLKFSGKFGVSNV 514
Score = 106 bits (264), Expect = 1e-20
Identities = 57/190 (30%), Positives = 101/190 (53%)
Frame = +3
Query: 15 DAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIYTCLM 194
+A LFE +K + PN R+YT+L+ CK N+ EA + +M++ G +PD + ++
Sbjct: 216 EAQALFENLKGRFT-PNLRTYTVLLNGWCKVKNLMEAGSVWNEMIDKGFKPDIVAHNIML 274
Query: 195 TGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQSDIK 374
G K+ +L MK KG PD R+Y LI+ + + ++AV+ +++MI S K
Sbjct: 275 EGLLRSKQRSDAIKLFMVMKAKGPSPDVRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCK 334
Query: 375 PSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNEACKY 554
P Y ++ + + +M Y + +EMK +GC PD +Y LI + R ++A +
Sbjct: 335 PDAAVYTCLITGFGNRKRMDMVYDLLKEMKEEGCPPDGLTYNALIKLMTRLKMPDDAARI 394
Query: 555 LEEMIDKGMK 584
++M G++
Sbjct: 395 YKKMTQSGIE 404
Score = 79.0 bits (193), Expect = 2e-12
Identities = 60/242 (24%), Positives = 105/242 (43%), Gaps = 3/242 (1%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
++ + + E M KG L +++I ++ ++A+ F M +
Sbjct: 143 RQFETVVSMLEEMGGKGVL-TMDTFSIAMRAFAAAKERKKAVAMFELMKKYNYKVGVETI 201
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
L+ K L + +K + P+ RTY L+ + +A ++ +MI
Sbjct: 202 NHLLDSLGRAKLGKEAQALFENLKGR-FTPNLRTYTVLLNGWCKVKNLMEAGSVWNEMID 260
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNE 542
KP I +N++++ ++ ++ MK KG PD SYT+LI L RQ + E
Sbjct: 261 KGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMVMKAKGPSPDVRSYTILIRYLCRQSKMEE 320
Query: 543 ACKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSG---NSEVANLFVR 713
A +Y +EMID G K Y L F R++++ DL + MK G + N ++
Sbjct: 321 AVEYFQEMIDSGCKPDAAVYTCLITGFGNRKRMDMVYDLLKEMKEEGCPPDGLTYNALIK 380
Query: 714 LM 719
LM
Sbjct: 381 LM 382
Score = 74.3 bits (181), Expect = 6e-11
Identities = 59/244 (24%), Positives = 109/244 (44%), Gaps = 4/244 (1%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDL--CKHGNMEEAIDYFYDMLNSGCEPDAA 176
K+ A+ +FE+MK + L+ L K G +A+ ++ L P+
Sbjct: 177 KERKKAVAMFELMKKYNYKVGVETINHLLDSLGRAKLGKEAQAL---FENLKGRFTPNLR 233
Query: 177 IYTCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKM 356
YT L+ G+ K + + EM +KG PD +N +++ + + DA+K++ M
Sbjct: 234 TYTVLLNGWCKVKNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMVM 293
Query: 357 IQSDIKPSIHTYNMIMKSYFIARNCEMGYAV--WEEMKRKGCCPDENSYTVLIGGLIRQG 530
P + +Y ++++ ++ R +M AV ++EM GC PD YT LI G +
Sbjct: 294 KAKGPSPDVRSYTILIR--YLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCLITGFGNRK 351
Query: 531 RSNEACKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSGNSEVANLFV 710
R + L+EM ++G L Y L +R + + ++M SG + +
Sbjct: 352 RMDMVYDLLKEMKEEGCPPDGLTYNALIKLMTRLKMPDDAARIYKKMTQSGIEPTIHTYN 411
Query: 711 RLMR 722
+M+
Sbjct: 412 MIMK 415
>ref|XP_004230081.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Solanum lycopersicum]
Length = 691
Score = 349 bits (895), Expect = 1e-93
Identities = 166/237 (70%), Positives = 198/237 (83%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
KK SDAI LFEVMK+KGP PN RSYTILI+DLCK G M+EA+ F +ML+SGCE DAA +
Sbjct: 440 KKRSDAITLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAVAGFEEMLSSGCEADAATF 499
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
TCL+TGF N+K+MD V+ LL EMKEKGC PD R YNALIK++ NR+MP DAV +YKKMI+
Sbjct: 500 TCLVTGFGNKKRMDKVFALLTEMKEKGCPPDARLYNALIKLLINRRMPVDAVTLYKKMIR 559
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNE 542
+ I+P+IHTYNM+MKS+F+ +N +M +A WEEM +GCCPDENSYTV IGGLI QGRS E
Sbjct: 560 NGIQPTIHTYNMLMKSFFMTKNYDMAHATWEEMSLRGCCPDENSYTVFIGGLIGQGRSME 619
Query: 543 ACKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSGNSEVANLFVR 713
ACKYLEEMIDKGMKAPQLDY K ADFSR G+ +ILE+LA+RMKFSG EV++LF R
Sbjct: 620 ACKYLEEMIDKGMKAPQLDYNKFAADFSRGGKPDILEELAKRMKFSGKFEVSSLFAR 676
Score = 93.6 bits (231), Expect = 1e-16
Identities = 58/223 (26%), Positives = 106/223 (47%)
Frame = +3
Query: 15 DAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIYTCLM 194
+A LFE ++ + PN ++YT+L+ C+ N+ +A + +M++ G +PD + ++
Sbjct: 375 EAQLLFEKLEHRFT-PNLQTYTVLLNGWCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTML 433
Query: 195 TGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQSDIK 374
G KK L + MK KG P+ R+Y LI+ + + D+AV +++M+ S +
Sbjct: 434 EGLLKCKKRSDAITLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAVAGFEEMLSSGCE 493
Query: 375 PSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNEACKY 554
T+ ++ + + + +A+ EMK KGC PD Y LI LI + +A
Sbjct: 494 ADAATFTCLVTGFGNKKRMDKVFALLTEMKEKGCPPDARLYNALIKLLINRRMPVDAVTL 553
Query: 555 LEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSG 683
++MI G++ Y L F ++ + M G
Sbjct: 554 YKKMIRNGIQPTIHTYNMLMKSFFMTKNYDMAHATWEEMSLRG 596
Score = 79.3 bits (194), Expect = 2e-12
Identities = 62/240 (25%), Positives = 104/240 (43%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
++ + + E M KG L ++ I +K ++AI F M +
Sbjct: 302 RQFETMVSVLEEMGEKGLL-TMEAFLISMKAFAAAKERKKAIGMFELMKKYKFKVGVETI 360
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
CL+ + K+ +LL E E P+ +TY L+ + DA K++ +MI
Sbjct: 361 NCLLDALG-RAKLGKEAQLLFEKLEHRFTPNLQTYTVLLNGWCRVKNLMDAGKVWNEMID 419
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNE 542
KP I +N +++ + ++E MK KG P+ SYT+LI L +QG+ +E
Sbjct: 420 KGFKPDIVAHNTMLEGLLKCKKRSDAITLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDE 479
Query: 543 ACKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSGNSEVANLFVRLMR 722
A EEM+ G +A + L F R++ + L MK G A L+ L++
Sbjct: 480 AVAGFEEMLSSGCEADAATFTCLVTGFGNKKRMDKVFALLTEMKEKGCPPDARLYNALIK 539
>ref|XP_006595405.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14820,
mitochondrial-like [Glycine max]
Length = 593
Score = 348 bits (893), Expect = 2e-93
Identities = 162/234 (69%), Positives = 196/234 (83%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
KK SDAIKLFE+MK+KGP PN RSYTI+I+D CK M EAI+YF M++ GC+PDAA+Y
Sbjct: 335 KKKSDAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMGEAIEYFDVMVDRGCQPDAALY 394
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
TCL+TGF QKKMDMVY LLKEM+E+GC PDGRTYNALIK+M ++ MPDDAV+IYKKMIQ
Sbjct: 395 TCLITGFGRQKKMDMVYSLLKEMRERGCPPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQ 454
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNE 542
S IKP+IHTYNMIMKSYF+ +N EMG+ +W+EM +KGCCPD+NSY V IGGLIRQ RS E
Sbjct: 455 SGIKPTIHTYNMIMKSYFVTKNYEMGHEIWDEMHQKGCCPDDNSYIVYIGGLIRQDRSGE 514
Query: 543 ACKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSGNSEVANL 704
ACKYLEEM++KGMKAP+LDY K +D S+ G ILE+LA++M F G EV+N+
Sbjct: 515 ACKYLEEMLEKGMKAPKLDYNKFASDISKTGNAVILEELARKMNFVGKFEVSNV 568
Score = 94.7 bits (234), Expect = 4e-17
Identities = 50/190 (26%), Positives = 100/190 (52%)
Frame = +3
Query: 15 DAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIYTCLM 194
+A +FE +K + P+ ++YTIL+ C+ N+ EA + +M++ G PD + ++
Sbjct: 270 EAQAVFEKLKDRFT-PSLQTYTILLSGWCRLKNLLEAGRVWNEMIDRGFNPDVVAHNVML 328
Query: 195 TGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQSDIK 374
G KK +L + MK KG P+ R+Y +I+ +++ +A++ + M+ +
Sbjct: 329 EGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMGEAIEYFDVMVDRGCQ 388
Query: 375 PSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNEACKY 554
P Y ++ + + +M Y++ +EM+ +GC PD +Y LI + Q ++A +
Sbjct: 389 PDAALYTCLITGFGRQKKMDMVYSLLKEMRERGCPPDGRTYNALIKLMTSQHMPDDAVRI 448
Query: 555 LEEMIDKGMK 584
++MI G+K
Sbjct: 449 YKKMIQSGIK 458
Score = 71.6 bits (174), Expect = 4e-10
Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 4/207 (1%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDL--CKHGNMEEAIDYFYDMLNSGCEPDAA 176
K+ A+ +F++MK G L+ L K G +A+ ++ L P
Sbjct: 231 KQRKKAVGIFDLMKKYGFKVGVDVINFLLDSLSTAKLGKEAQAV---FEKLKDRFTPSLQ 287
Query: 177 IYTCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKM 356
YT L++G+ K + R+ EM ++G PD +N +++ + + DA+K+++ M
Sbjct: 288 TYTILLSGWCRLKNLLEAGRVWNEMIDRGFNPDVVAHNVMLEGLLKCKKKSDAIKLFEIM 347
Query: 357 IQSDIKPSIHTYNMIMKSYFIARNCEMGYAV--WEEMKRKGCCPDENSYTVLIGGLIRQG 530
P++ +Y ++++ + + MG A+ ++ M +GC PD YT LI G RQ
Sbjct: 348 KAKGPSPNVRSYTIMIQDF--CKQKLMGEAIEYFDVMVDRGCQPDAALYTCLITGFGRQK 405
Query: 531 RSNEACKYLEEMIDKGMKAPQLDYKKL 611
+ + L+EM ++G Y L
Sbjct: 406 KMDMVYSLLKEMRERGCPPDGRTYNAL 432
Score = 71.2 bits (173), Expect = 5e-10
Identities = 51/242 (21%), Positives = 108/242 (44%), Gaps = 3/242 (1%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
++ + + E M KG L +++I IK + ++A+ F M G + +
Sbjct: 197 RQFETMVAMLEEMGEKGLL-TMETFSIAIKAFAEAKQRKKAVGIFDLMKKYGFKVGVDVI 255
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
L+ + K + +++K++ P +TY L+ + +A +++ +MI
Sbjct: 256 NFLLDSLSTAKLGKEAQAVFEKLKDR-FTPSLQTYTILLSGWCRLKNLLEAGRVWNEMID 314
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNE 542
P + +N++++ + ++E MK KG P+ SYT++I +Q E
Sbjct: 315 RGFNPDVVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMGE 374
Query: 543 ACKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSG---NSEVANLFVR 713
A +Y + M+D+G + Y L F R +++++ L + M+ G + N ++
Sbjct: 375 AIEYFDVMVDRGCQPDAALYTCLITGFGRQKKMDMVYSLLKEMRERGCPPDGRTYNALIK 434
Query: 714 LM 719
LM
Sbjct: 435 LM 436
>ref|NP_191806.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181319|sp|Q9LZP3.1|PP293_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g62470, mitochondrial; Flags: Precursor
gi|7340718|emb|CAB82961.1| putative protein [Arabidopsis
thaliana] gi|34365579|gb|AAQ65101.1| At3g62470
[Arabidopsis thaliana] gi|332646835|gb|AEE80356.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 599
Score = 340 bits (871), Expect = 6e-91
Identities = 161/237 (67%), Positives = 194/237 (81%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
+K SDAIKLF VMKSKGP PN RSYTI+I+D CK +ME AI+YF DM++SG +PDAA+Y
Sbjct: 347 RKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVY 406
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
TCL+TGF QKK+D VY LLKEM+EKG PDG+TYNALIK+MAN++MP+ A +IY KMIQ
Sbjct: 407 TCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQ 466
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNE 542
++I+PSIHT+NMIMKSYF+ARN EMG AVWEEM +KG CPD+NSYTVLI GLI +G+S E
Sbjct: 467 NEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSRE 526
Query: 543 ACKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSGNSEVANLFVR 713
AC+YLEEM+DKGMK P +DY K ADF R G+ I E+LAQR KFSG A +F R
Sbjct: 527 ACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFAR 583
Score = 89.7 bits (221), Expect = 1e-15
Identities = 48/185 (25%), Positives = 90/185 (48%)
Frame = +3
Query: 15 DAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIYTCLM 194
+A LF+ +K + PN +YT+L+ C+ N+ EA + DM++ G +PD + ++
Sbjct: 282 EAQVLFDKLKERFT-PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVML 340
Query: 195 TGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQSDIK 374
G +K +L MK KG P+ R+Y +I+ + + A++ + M+ S ++
Sbjct: 341 EGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 400
Query: 375 PSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNEACKY 554
P Y ++ + + + Y + +EM+ KG PD +Y LI + Q A +
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRI 460
Query: 555 LEEMI 569
+MI
Sbjct: 461 YNKMI 465
Score = 79.3 bits (194), Expect = 2e-12
Identities = 55/242 (22%), Positives = 107/242 (44%), Gaps = 3/242 (1%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
++ + + E M +KG L ++TI +K ++A+ F M +
Sbjct: 209 RQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETI 267
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
CL+ K L ++KE+ P+ TY L+ + +A +I+ MI
Sbjct: 268 NCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID 326
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNE 542
+KP I +N++++ +R ++ MK KG CP+ SYT++I +Q
Sbjct: 327 QGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 386
Query: 543 ACKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSG---NSEVANLFVR 713
A +Y ++M+D G++ Y L F +++ + +L + M+ G + + N ++
Sbjct: 387 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 446
Query: 714 LM 719
LM
Sbjct: 447 LM 448
>ref|XP_006827738.1| hypothetical protein AMTR_s00009p00261890 [Amborella trichopoda]
gi|548832358|gb|ERM95154.1| hypothetical protein
AMTR_s00009p00261890 [Amborella trichopoda]
Length = 575
Score = 340 bits (871), Expect = 6e-91
Identities = 160/247 (64%), Positives = 201/247 (81%), Gaps = 1/247 (0%)
Frame = +3
Query: 12 SDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIYTCL 191
S+AIKLF++MK+KGP PN RSYTI+I+ LCK MEEA+D+F +ML GC PD A+YTCL
Sbjct: 319 SEAIKLFKLMKAKGPSPNVRSYTIVIRHLCKGKKMEEAMDFFNEMLAKGCLPDPAVYTCL 378
Query: 192 MTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQSDI 371
+ GF N +KMD VY LL+EM+EKGC PDGRTYNALIK+M NR MP DA ++YKKMI +
Sbjct: 379 IVGFGNARKMDCVYGLLREMREKGCPPDGRTYNALIKLMTNRNMPGDAARVYKKMIADGL 438
Query: 372 KPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNEACK 551
+P+ HTYNM+MKSYF+ ++ E G AVW+EM +KG CPD+NSYTV IGGLIR+G+S+EACK
Sbjct: 439 EPTFHTYNMLMKSYFLVKDYESGRAVWKEMAKKGICPDDNSYTVYIGGLIREGKSDEACK 498
Query: 552 YLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSGNSEVANLFVRLM-R** 728
Y+E+MI+KGMK PQ DY K ADFSRAG+ NILE+LAQ+MKFSG +V+N+F+R R
Sbjct: 499 YIEDMINKGMKLPQFDYNKFAADFSRAGKPNILEELAQKMKFSGKFDVSNIFLRFADRMK 558
Query: 729 RQVK*RD 749
R+VK RD
Sbjct: 559 RRVKRRD 565
Score = 91.7 bits (226), Expect = 4e-16
Identities = 54/199 (27%), Positives = 95/199 (47%)
Frame = +3
Query: 27 LFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIYTCLMTGFA 206
LFE MK + P+ R+Y+IL+ K N+ EA + DM++ G PD Y ++ G
Sbjct: 255 LFEKMKDQFN-PDLRTYSILLFGWSKVKNLSEAGKIWNDMIDKGFRPDIVAYNTMLEGLF 313
Query: 207 NQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQSDIKPSIH 386
+ +L K MK KG P+ R+Y +I+ + + ++A+ + +M+ P
Sbjct: 314 LGNRRSEAIKLFKLMKAKGPSPNVRSYTIVIRHLCKGKKMEEAMDFFNEMLAKGCLPDPA 373
Query: 387 TYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNEACKYLEEM 566
Y ++ + AR + Y + EM+ KGC PD +Y LI + + +A + ++M
Sbjct: 374 VYTCLIVGFGNARKMDCVYGLLREMREKGCPPDGRTYNALIKLMTNRNMPGDAARVYKKM 433
Query: 567 IDKGMKAPQLDYKKLKADF 623
I G++ Y L +
Sbjct: 434 IADGLEPTFHTYNMLMKSY 452
Score = 76.6 bits (187), Expect = 1e-11
Identities = 59/242 (24%), Positives = 108/242 (44%), Gaps = 3/242 (1%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
++ +++ E M K + ++ I I+ + M++A+ F M G E +
Sbjct: 178 RRFESMVEMLEEM-GKVHCLSIETFEIAIRAFARAREMKKAVAMFELMGRHGFEAGIMTF 236
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
L+ A K L ++MK++ PD RTY+ L+ + + +A KI+ MI
Sbjct: 237 NKLIDSLARAKLGKEAQILFEKMKDQ-FNPDLRTYSILLFGWSKVKNLSEAGKIWNDMID 295
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNE 542
+P I YN +++ F+ +++ MK KG P+ SYT++I L + + E
Sbjct: 296 KGFRPDIVAYNTMLEGLFLGNRRSEAIKLFKLMKAKGPSPNVRSYTIVIRHLCKGKKMEE 355
Query: 543 ACKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSG---NSEVANLFVR 713
A + EM+ KG Y L F A +++ + L + M+ G + N ++
Sbjct: 356 AMDFFNEMLAKGCLPDPAVYTCLIVGFGNARKMDCVYGLLREMREKGCPPDGRTYNALIK 415
Query: 714 LM 719
LM
Sbjct: 416 LM 417
Score = 57.8 bits (138), Expect = 6e-06
Identities = 41/157 (26%), Positives = 64/157 (40%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
+K+ L M+ KG P+ R+Y LIK + +A + M+ G EP Y
Sbjct: 386 RKMDCVYGLLREMREKGCPPDGRTYNALIKLMTNRNMPGDAARVYKKMIADGLEPTFHTY 445
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
LM + K + + KEM +KG PD +Y I + D+A K + MI
Sbjct: 446 NMLMKSYFLVKDYESGRAVWKEMAKKGICPDDNSYTVYIGGLIREGKSDEACKYIEDMIN 505
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKG 473
+K YN + A + + ++MK G
Sbjct: 506 KGMKLPQFDYNKFAADFSRAGKPNILEELAQKMKFSG 542
>gb|ESW20009.1| hypothetical protein PHAVU_006G173400g [Phaseolus vulgaris]
Length = 638
Score = 338 bits (866), Expect = 2e-90
Identities = 156/234 (66%), Positives = 191/234 (81%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
KK SDAIKLFE+MK+KGP PN RSYTI+I+D CK EAI+YF DM++ GC+PD A+Y
Sbjct: 380 KKKSDAIKLFEIMKAKGPSPNVRSYTIIIQDFCKQKMTGEAIEYFDDMVDRGCQPDVALY 439
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
TCL+TGF QKKMD VY LLKEM+E+GC PDGRTYNALIK+M ++ MPDDAV+IYKKMIQ
Sbjct: 440 TCLITGFGRQKKMDTVYNLLKEMRERGCSPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQ 499
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNE 542
S I+P+IH+YNMIMKSYF+ +N EMG +W+EM +KGCCPD+NSY V IGGLIRQ RS +
Sbjct: 500 SGIEPTIHSYNMIMKSYFMTKNYEMGQVIWDEMHQKGCCPDDNSYAVFIGGLIRQDRSGD 559
Query: 543 ACKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSGNSEVANL 704
AC+YLEEM+ KGMKAPQLDY K +D S+ G ILE+LA++M G EV+N+
Sbjct: 560 ACRYLEEMLGKGMKAPQLDYNKFASDISKTGNTVILEELARKMNCVGKFEVSNV 613
Score = 97.1 bits (240), Expect = 9e-18
Identities = 51/203 (25%), Positives = 103/203 (50%)
Frame = +3
Query: 15 DAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIYTCLM 194
+A LFE ++ + PN ++YTIL+ C+ N+ EA + +M++ G +PD + ++
Sbjct: 315 EAEALFEKLRDRFT-PNLQTYTILLSGWCRLKNLLEAGKVWNEMIDGGFKPDIVAHNVML 373
Query: 195 TGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQSDIK 374
G KK +L + MK KG P+ R+Y +I+ ++M +A++ + M+ +
Sbjct: 374 EGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIIIQDFCKQKMTGEAIEYFDDMVDRGCQ 433
Query: 375 PSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNEACKY 554
P + Y ++ + + + Y + +EM+ +GC PD +Y LI + Q ++A +
Sbjct: 434 PDVALYTCLITGFGRQKKMDTVYNLLKEMRERGCSPDGRTYNALIKLMTSQHMPDDAVRI 493
Query: 555 LEEMIDKGMKAPQLDYKKLKADF 623
++MI G++ Y + +
Sbjct: 494 YKKMIQSGIEPTIHSYNMIMKSY 516
Score = 73.2 bits (178), Expect = 1e-10
Identities = 54/242 (22%), Positives = 110/242 (45%), Gaps = 3/242 (1%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
++ + L E M KG L +++I IK + ++A+ F M + +
Sbjct: 242 RQFETMVALLEEMGQKGLL-TMETFSIAIKAFAEAKQRKKAVGIFDLMKKHRFKVGVDMI 300
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
L+ K L ++++++ P+ +TY L+ + +A K++ +MI
Sbjct: 301 NFLLESLGAAKLGKEAEALFEKLRDR-FTPNLQTYTILLSGWCRLKNLLEAGKVWNEMID 359
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNE 542
KP I +N++++ + ++E MK KG P+ SYT++I +Q + E
Sbjct: 360 GGFKPDIVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIIIQDFCKQKMTGE 419
Query: 543 ACKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSG---NSEVANLFVR 713
A +Y ++M+D+G + Y L F R +++ + +L + M+ G + N ++
Sbjct: 420 AIEYFDDMVDRGCQPDVALYTCLITGFGRQKKMDTVYNLLKEMRERGCSPDGRTYNALIK 479
Query: 714 LM 719
LM
Sbjct: 480 LM 481
>gb|ESW20008.1| hypothetical protein PHAVU_006G173400g [Phaseolus vulgaris]
Length = 458
Score = 338 bits (866), Expect = 2e-90
Identities = 156/234 (66%), Positives = 191/234 (81%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
KK SDAIKLFE+MK+KGP PN RSYTI+I+D CK EAI+YF DM++ GC+PD A+Y
Sbjct: 200 KKKSDAIKLFEIMKAKGPSPNVRSYTIIIQDFCKQKMTGEAIEYFDDMVDRGCQPDVALY 259
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
TCL+TGF QKKMD VY LLKEM+E+GC PDGRTYNALIK+M ++ MPDDAV+IYKKMIQ
Sbjct: 260 TCLITGFGRQKKMDTVYNLLKEMRERGCSPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQ 319
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNE 542
S I+P+IH+YNMIMKSYF+ +N EMG +W+EM +KGCCPD+NSY V IGGLIRQ RS +
Sbjct: 320 SGIEPTIHSYNMIMKSYFMTKNYEMGQVIWDEMHQKGCCPDDNSYAVFIGGLIRQDRSGD 379
Query: 543 ACKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSGNSEVANL 704
AC+YLEEM+ KGMKAPQLDY K +D S+ G ILE+LA++M G EV+N+
Sbjct: 380 ACRYLEEMLGKGMKAPQLDYNKFASDISKTGNTVILEELARKMNCVGKFEVSNV 433
Score = 97.1 bits (240), Expect = 9e-18
Identities = 51/203 (25%), Positives = 103/203 (50%)
Frame = +3
Query: 15 DAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIYTCLM 194
+A LFE ++ + PN ++YTIL+ C+ N+ EA + +M++ G +PD + ++
Sbjct: 135 EAEALFEKLRDRFT-PNLQTYTILLSGWCRLKNLLEAGKVWNEMIDGGFKPDIVAHNVML 193
Query: 195 TGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQSDIK 374
G KK +L + MK KG P+ R+Y +I+ ++M +A++ + M+ +
Sbjct: 194 EGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIIIQDFCKQKMTGEAIEYFDDMVDRGCQ 253
Query: 375 PSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNEACKY 554
P + Y ++ + + + Y + +EM+ +GC PD +Y LI + Q ++A +
Sbjct: 254 PDVALYTCLITGFGRQKKMDTVYNLLKEMRERGCSPDGRTYNALIKLMTSQHMPDDAVRI 313
Query: 555 LEEMIDKGMKAPQLDYKKLKADF 623
++MI G++ Y + +
Sbjct: 314 YKKMIQSGIEPTIHSYNMIMKSY 336
Score = 73.2 bits (178), Expect = 1e-10
Identities = 54/242 (22%), Positives = 110/242 (45%), Gaps = 3/242 (1%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
++ + L E M KG L +++I IK + ++A+ F M + +
Sbjct: 62 RQFETMVALLEEMGQKGLL-TMETFSIAIKAFAEAKQRKKAVGIFDLMKKHRFKVGVDMI 120
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
L+ K L ++++++ P+ +TY L+ + +A K++ +MI
Sbjct: 121 NFLLESLGAAKLGKEAEALFEKLRDR-FTPNLQTYTILLSGWCRLKNLLEAGKVWNEMID 179
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNE 542
KP I +N++++ + ++E MK KG P+ SYT++I +Q + E
Sbjct: 180 GGFKPDIVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIIIQDFCKQKMTGE 239
Query: 543 ACKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSG---NSEVANLFVR 713
A +Y ++M+D+G + Y L F R +++ + +L + M+ G + N ++
Sbjct: 240 AIEYFDDMVDRGCQPDVALYTCLITGFGRQKKMDTVYNLLKEMRERGCSPDGRTYNALIK 299
Query: 714 LM 719
LM
Sbjct: 300 LM 301
>ref|NP_191813.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214682|sp|Q3EAF8.1|PP294_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g62540, mitochondrial; Flags: Precursor
gi|332646841|gb|AEE80362.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 337 bits (865), Expect = 3e-90
Identities = 159/236 (67%), Positives = 192/236 (81%)
Frame = +3
Query: 6 KISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIYT 185
K SDAIKLF VMKSKGP PN RSYTI+I+D CK +ME AI+YF DM++SG +PDAA+YT
Sbjct: 348 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 407
Query: 186 CLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQS 365
CL+TGF QKK+D VY LLKEM+EKG PDG+TYNALIK+MAN++MP+ +IY KMIQ+
Sbjct: 408 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQN 467
Query: 366 DIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNEA 545
+I+PSIHT+NMIMKSYF+ARN EMG AVW+EM +KG CPD+NSYTVLI GLI +G+S EA
Sbjct: 468 EIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREA 527
Query: 546 CKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSGNSEVANLFVR 713
C+YLEEM+DKGMK P +DY K ADF R G+ I E+LAQR KFSG A +F R
Sbjct: 528 CRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFAR 583
Score = 86.7 bits (213), Expect = 1e-14
Identities = 47/185 (25%), Positives = 88/185 (47%)
Frame = +3
Query: 15 DAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIYTCLM 194
+A LF+ +K + PN +YT+L+ C+ N+ EA + DM++ G +PD + ++
Sbjct: 282 EAQVLFDKLKERFT-PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVML 340
Query: 195 TGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQSDIK 374
G K +L MK KG P+ R+Y +I+ + + A++ + M+ S ++
Sbjct: 341 EGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 400
Query: 375 PSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNEACKY 554
P Y ++ + + + Y + +EM+ KG PD +Y LI + Q +
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 460
Query: 555 LEEMI 569
+MI
Sbjct: 461 YNKMI 465
Score = 76.6 bits (187), Expect = 1e-11
Identities = 54/242 (22%), Positives = 106/242 (43%), Gaps = 3/242 (1%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
++ + + E M +KG L ++TI +K ++A+ F M +
Sbjct: 209 RQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETI 267
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
CL+ K L ++KE+ P+ TY L+ + +A +I+ MI
Sbjct: 268 NCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID 326
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNE 542
+KP I +N++++ + ++ MK KG CP+ SYT++I +Q
Sbjct: 327 HGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 386
Query: 543 ACKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSG---NSEVANLFVR 713
A +Y ++M+D G++ Y L F +++ + +L + M+ G + + N ++
Sbjct: 387 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 446
Query: 714 LM 719
LM
Sbjct: 447 LM 448
>emb|CAB82968.1| putative protein [Arabidopsis thaliana]
Length = 308
Score = 337 bits (865), Expect = 3e-90
Identities = 159/236 (67%), Positives = 192/236 (81%)
Frame = +3
Query: 6 KISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIYT 185
K SDAIKLF VMKSKGP PN RSYTI+I+D CK +ME AI+YF DM++SG +PDAA+YT
Sbjct: 57 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 116
Query: 186 CLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQS 365
CL+TGF QKK+D VY LLKEM+EKG PDG+TYNALIK+MAN++MP+ +IY KMIQ+
Sbjct: 117 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQN 176
Query: 366 DIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNEA 545
+I+PSIHT+NMIMKSYF+ARN EMG AVW+EM +KG CPD+NSYTVLI GLI +G+S EA
Sbjct: 177 EIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREA 236
Query: 546 CKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSGNSEVANLFVR 713
C+YLEEM+DKGMK P +DY K ADF R G+ I E+LAQR KFSG A +F R
Sbjct: 237 CRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFAR 292
Score = 85.1 bits (209), Expect = 3e-14
Identities = 43/170 (25%), Positives = 80/170 (47%)
Frame = +3
Query: 60 PNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIYTCLMTGFANQKKMDMVYRL 239
PN +YT+L+ C+ N+ EA + DM++ G +PD + ++ G K +L
Sbjct: 5 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKL 64
Query: 240 LKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQSDIKPSIHTYNMIMKSYFI 419
MK KG P+ R+Y +I+ + + A++ + M+ S ++P Y ++ +
Sbjct: 65 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 124
Query: 420 ARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNEACKYLEEMI 569
+ + Y + +EM+ KG PD +Y LI + Q + +MI
Sbjct: 125 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMI 174
Score = 65.9 bits (159), Expect = 2e-08
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Frame = +3
Query: 270 PDGRTYNALIKMMANRQMPDDAVKIYKKMIQSDIKPSIHTYNMIMKSYFIARNCEMGYAV 449
P+ TY L+ + +A +I+ MI +KP I +N++++ + +
Sbjct: 5 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKL 64
Query: 450 WEEMKRKGCCPDENSYTVLIGGLIRQGRSNEACKYLEEMIDKGMKAPQLDYKKLKADFSR 629
+ MK KG CP+ SYT++I +Q A +Y ++M+D G++ Y L F
Sbjct: 65 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 124
Query: 630 AGRVNILEDLAQRMKFSG---NSEVANLFVRLM 719
+++ + +L + M+ G + + N ++LM
Sbjct: 125 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLM 157
Score = 61.2 bits (147), Expect = 5e-07
Identities = 33/138 (23%), Positives = 66/138 (47%)
Frame = +3
Query: 165 PDAAIYTCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKI 344
P+ YT L+ G+ + + R+ +M + G PD +N +++ + DA+K+
Sbjct: 5 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKL 64
Query: 345 YKKMIQSDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIR 524
+ M P++ +Y ++++ + + E +++M G PD YT LI G
Sbjct: 65 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 124
Query: 525 QGRSNEACKYLEEMIDKG 578
Q + + + L+EM +KG
Sbjct: 125 QKKLDTVYELLKEMQEKG 142
>ref|XP_002878464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297324302|gb|EFH54723.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 628
Score = 337 bits (865), Expect = 3e-90
Identities = 159/237 (67%), Positives = 194/237 (81%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
+K SDAIKLF VMKSKGP PN RSYTI+I+D CK +ME AI+YF DM++SG +PDAA+Y
Sbjct: 356 RKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVY 415
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
TCL+TGF QKK+D VY LLKEM+EKG PDG+TYNALIK+MAN++MP+ A +IY KMIQ
Sbjct: 416 TCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQ 475
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNE 542
++I+PSIHT+NMIMKSYF+ARN EMG AVW+EM +KG CPD+NSYTVLI GLI +G+S E
Sbjct: 476 NEIEPSIHTFNMIMKSYFMARNYEMGSAVWDEMIKKGICPDDNSYTVLIRGLIGEGKSRE 535
Query: 543 ACKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSGNSEVANLFVR 713
AC+YLEEM+DKGMK P +DY K ADF + G+ I E+LAQR KFSG A +F R
Sbjct: 536 ACRYLEEMLDKGMKTPLIDYNKFAADFHKGGQPEIFEELAQRAKFSGKFAAAEIFAR 592
Score = 89.7 bits (221), Expect = 1e-15
Identities = 48/185 (25%), Positives = 90/185 (48%)
Frame = +3
Query: 15 DAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIYTCLM 194
+A LF+ +K + PN +YT+L+ C+ N+ EA + DM++ G +PD + ++
Sbjct: 291 EAQVLFDKLKERFT-PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVML 349
Query: 195 TGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQSDIK 374
G +K +L MK KG P+ R+Y +I+ + + A++ + M+ S ++
Sbjct: 350 EGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 409
Query: 375 PSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNEACKY 554
P Y ++ + + + Y + +EM+ KG PD +Y LI + Q A +
Sbjct: 410 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRI 469
Query: 555 LEEMI 569
+MI
Sbjct: 470 YNKMI 474
Score = 79.3 bits (194), Expect = 2e-12
Identities = 55/242 (22%), Positives = 107/242 (44%), Gaps = 3/242 (1%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
++ + + E M +KG L ++TI +K ++A+ F M +
Sbjct: 218 RQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETI 276
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
CL+ K L ++KE+ P+ TY L+ + +A +I+ MI
Sbjct: 277 NCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID 335
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNE 542
+KP I +N++++ +R ++ MK KG CP+ SYT++I +Q
Sbjct: 336 QGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 395
Query: 543 ACKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSG---NSEVANLFVR 713
A +Y ++M+D G++ Y L F +++ + +L + M+ G + + N ++
Sbjct: 396 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 455
Query: 714 LM 719
LM
Sbjct: 456 LM 457
>ref|NP_196986.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173968|sp|Q9LEQ7.1|PP382_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g14820, mitochondrial; Flags: Precursor
gi|9755750|emb|CAC01881.1| putative protein [Arabidopsis
thaliana] gi|332004697|gb|AED92080.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 337 bits (865), Expect = 3e-90
Identities = 159/236 (67%), Positives = 192/236 (81%)
Frame = +3
Query: 6 KISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIYT 185
K SDAIKLF VMKSKGP PN RSYTI+I+D CK +ME AI+YF DM++SG +PDAA+YT
Sbjct: 347 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 406
Query: 186 CLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQS 365
CL+TGF QKK+D VY LLKEM+EKG PDG+TYNALIK+MAN++MP+ +IY KMIQ+
Sbjct: 407 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQN 466
Query: 366 DIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNEA 545
+I+PSIHT+NMIMKSYF+ARN EMG AVW+EM +KG CPD+NSYTVLI GLI +G+S EA
Sbjct: 467 EIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREA 526
Query: 546 CKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSGNSEVANLFVR 713
C+YLEEM+DKGMK P +DY K ADF R G+ I E+LAQR KFSG A +F R
Sbjct: 527 CRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFAR 582
Score = 86.7 bits (213), Expect = 1e-14
Identities = 47/185 (25%), Positives = 88/185 (47%)
Frame = +3
Query: 15 DAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIYTCLM 194
+A LF+ +K + PN +YT+L+ C+ N+ EA + DM++ G +PD + ++
Sbjct: 281 EAQVLFDKLKERFT-PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVML 339
Query: 195 TGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQSDIK 374
G K +L MK KG P+ R+Y +I+ + + A++ + M+ S ++
Sbjct: 340 EGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 399
Query: 375 PSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNEACKY 554
P Y ++ + + + Y + +EM+ KG PD +Y LI + Q +
Sbjct: 400 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 459
Query: 555 LEEMI 569
+MI
Sbjct: 460 YNKMI 464
Score = 76.6 bits (187), Expect = 1e-11
Identities = 54/242 (22%), Positives = 106/242 (43%), Gaps = 3/242 (1%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
++ + + E M +KG L ++TI +K ++A+ F M +
Sbjct: 208 RQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETI 266
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
CL+ K L ++KE+ P+ TY L+ + +A +I+ MI
Sbjct: 267 NCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID 325
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNE 542
+KP I +N++++ + ++ MK KG CP+ SYT++I +Q
Sbjct: 326 HGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 385
Query: 543 ACKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSG---NSEVANLFVR 713
A +Y ++M+D G++ Y L F +++ + +L + M+ G + + N ++
Sbjct: 386 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 445
Query: 714 LM 719
LM
Sbjct: 446 LM 447
>ref|XP_006492325.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Citrus sinensis]
Length = 651
Score = 335 bits (858), Expect = 2e-89
Identities = 158/236 (66%), Positives = 194/236 (82%)
Frame = +3
Query: 6 KISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIYT 185
K SDAIKLFEVMK+KGP PN RSYTI+I CK M+EA++YF +ML GC+PDAA+YT
Sbjct: 398 KRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQSKMKEAVEYFDEMLKFGCQPDAAVYT 457
Query: 186 CLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQS 365
CL+TGF N+++MD+VY LLKEM+E+GC PDG TYNALIK+M ++MPD+AV+IYK+M++S
Sbjct: 458 CLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRS 517
Query: 366 DIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNEA 545
KP+IHTYNMIMKSYF N EMG VW+EM R+GCCPD+NSYTVLIGGLI Q RS EA
Sbjct: 518 GFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEA 577
Query: 546 CKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSGNSEVANLFVR 713
KYLEEM++KGMKAP LDY K AD SRAGR +L++LAQ+M+FSG EV+N+ R
Sbjct: 578 YKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDELAQKMRFSGKFEVSNVLAR 633
Score = 90.9 bits (224), Expect = 6e-16
Identities = 53/207 (25%), Positives = 101/207 (48%)
Frame = +3
Query: 15 DAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIYTCLM 194
+A LF+ +K + PN +YT+L+ C+ N+ EA + +M++ G +PD + ++
Sbjct: 332 EAQLLFDKLKHRFT-PNLTTYTVLLGSWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIML 390
Query: 195 TGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQSDIK 374
G K +L + MK KG P+ R+Y +I + +AV+ + +M++ +
Sbjct: 391 EGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQSKMKEAVEYFDEMLKFGCQ 450
Query: 375 PSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNEACKY 554
P Y ++ + R ++ Y + +EM+ +GC PD +Y LI + Q +EA +
Sbjct: 451 PDAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRI 510
Query: 555 LEEMIDKGMKAPQLDYKKLKADFSRAG 635
+EM+ G K Y + + + G
Sbjct: 511 YKEMVRSGFKPTIHTYNMIMKSYFQTG 537
Score = 69.3 bits (168), Expect = 2e-09
Identities = 53/243 (21%), Positives = 103/243 (42%), Gaps = 3/243 (1%)
Frame = +3
Query: 3 KKISDAIKLFEVMKSKGPLPNARSYTILIKDLCKHGNMEEAIDYFYDMLNSGCEPDAAIY 182
++ + + E M KG L + ++ I + ++A+ F M +
Sbjct: 259 RQFETMVSMLEEMGEKGLL-SMETFKIAMNAFAAAKERKKAVAIFELMNKYKFKAGVDTI 317
Query: 183 TCLMTGFANQKKMDMVYRLLKEMKEKGCLPDGRTYNALIKMMANRQMPDDAVKIYKKMIQ 362
CL+ K L ++K + P+ TY L+ + +A +++ +MI
Sbjct: 318 NCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLLGSWCRVKNLMEAGRVWNEMID 376
Query: 363 SDIKPSIHTYNMIMKSYFIARNCEMGYAVWEEMKRKGCCPDENSYTVLIGGLIRQGRSNE 542
KP + +N++++ ++E MK KG P+ SYT++I +Q + E
Sbjct: 377 KGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQSKMKE 436
Query: 543 ACKYLEEMIDKGMKAPQLDYKKLKADFSRAGRVNILEDLAQRMKFSG---NSEVANLFVR 713
A +Y +EM+ G + Y L F R++I+ DL + M+ G + N ++
Sbjct: 437 AVEYFDEMLKFGCQPDAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIK 496
Query: 714 LMR 722
LM+
Sbjct: 497 LMK 499