BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00011846
         (646 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOX98005.1| Cryptochrome-interacting basic-helix-loop-helix 1...    84   5e-14
gb|EOX98004.1| Cryptochrome-interacting basic-helix-loop-helix 1...    84   5e-14
gb|EOX98002.1| Cryptochrome-interacting basic-helix-loop-helix 1...    84   5e-14
gb|EOX98001.1| Cryptochrome-interacting basic-helix-loop-helix 1...    84   5e-14
gb|EOX98000.1| Cryptochrome-interacting basic-helix-loop-helix 1...    84   5e-14
ref|XP_006365113.1| PREDICTED: transcription factor bHLH64-like ...    77   4e-12
ref|XP_004289668.1| PREDICTED: transcription factor bHLH63-like ...    75   1e-11
ref|XP_006469145.1| PREDICTED: transcription factor bHLH63-like ...    70   7e-10
ref|XP_006423284.1| hypothetical protein CICLE_v10028494mg [Citr...    70   7e-10
gb|EXB37137.1| hypothetical protein L484_018560 [Morus notabilis]      69   9e-10
ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like ...    69   2e-09
ref|XP_004230908.1| PREDICTED: transcription factor bHLH63-like ...    67   4e-09
ref|XP_006469146.1| PREDICTED: transcription factor bHLH63-like ...    65   1e-08
ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like ...    65   1e-08
ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like ...    65   1e-08
ref|XP_002313497.2| hypothetical protein POPTR_0009s12000g [Popu...    64   4e-08
ref|XP_002313791.1| basic helix-loop-helix family protein [Popul...    64   4e-08
ref|XP_002305434.2| hypothetical protein POPTR_0004s16330g [Popu...    62   1e-07
ref|XP_002512912.1| conserved hypothetical protein [Ricinus comm...    62   1e-07
gb|EOX98003.1| Cryptochrome-interacting basic-helix-loop-helix 1...    57   4e-06

>gb|EOX98005.1| Cryptochrome-interacting basic-helix-loop-helix 1, putative isoform
           6, partial [Theobroma cacao]
          Length = 377

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 27/142 (19%)
 Frame = -3

Query: 581 MKSGFPEMLHFLNSENTEMSVLERQRSRLKWQQQ-------EQLIQPIAYFNEENVQLGS 423
           M    PEML     + ++M+VLERQR+RLKWQQ+       +Q  Q  +YF+E    L  
Sbjct: 1   MNRALPEML-----QCSDMTVLERQRARLKWQQEQLQQQQLQQQEQQQSYFSE----LSG 51

Query: 422 VFSG------------LNGDQGLGELLMGGAMKPDPGIEPGWGDDIRRVL--------SY 303
           VFS             ++GD  LG+++M   +KPDPG+E  W + ++  +         Y
Sbjct: 52  VFSSQPSHVEGFQGGLMSGDSVLGDMVMTRQLKPDPGLETAWPELVKVDMPGMGFGPCGY 111

Query: 302 GNGSELEMGYAIPRTLSCPPNV 237
           GNG   +M YAI RT SCPP V
Sbjct: 112 GNGPSFDMNYAISRTSSCPPAV 133


>gb|EOX98004.1| Cryptochrome-interacting basic-helix-loop-helix 1, putative isoform
           5 [Theobroma cacao]
          Length = 301

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 27/142 (19%)
 Frame = -3

Query: 581 MKSGFPEMLHFLNSENTEMSVLERQRSRLKWQQQ-------EQLIQPIAYFNEENVQLGS 423
           M    PEML     + ++M+VLERQR+RLKWQQ+       +Q  Q  +YF+E    L  
Sbjct: 1   MNRALPEML-----QCSDMTVLERQRARLKWQQEQLQQQQLQQQEQQQSYFSE----LSG 51

Query: 422 VFSG------------LNGDQGLGELLMGGAMKPDPGIEPGWGDDIRRVL--------SY 303
           VFS             ++GD  LG+++M   +KPDPG+E  W + ++  +         Y
Sbjct: 52  VFSSQPSHVEGFQGGLMSGDSVLGDMVMTRQLKPDPGLETAWPELVKVDMPGMGFGPCGY 111

Query: 302 GNGSELEMGYAIPRTLSCPPNV 237
           GNG   +M YAI RT SCPP V
Sbjct: 112 GNGPSFDMNYAISRTSSCPPAV 133


>gb|EOX98002.1| Cryptochrome-interacting basic-helix-loop-helix 1, putative isoform
           3 [Theobroma cacao]
          Length = 418

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 27/142 (19%)
 Frame = -3

Query: 581 MKSGFPEMLHFLNSENTEMSVLERQRSRLKWQQQ-------EQLIQPIAYFNEENVQLGS 423
           M    PEML     + ++M+VLERQR+RLKWQQ+       +Q  Q  +YF+E    L  
Sbjct: 1   MNRALPEML-----QCSDMTVLERQRARLKWQQEQLQQQQLQQQEQQQSYFSE----LSG 51

Query: 422 VFSG------------LNGDQGLGELLMGGAMKPDPGIEPGWGDDIRRVL--------SY 303
           VFS             ++GD  LG+++M   +KPDPG+E  W + ++  +         Y
Sbjct: 52  VFSSQPSHVEGFQGGLMSGDSVLGDMVMTRQLKPDPGLETAWPELVKVDMPGMGFGPCGY 111

Query: 302 GNGSELEMGYAIPRTLSCPPNV 237
           GNG   +M YAI RT SCPP V
Sbjct: 112 GNGPSFDMNYAISRTSSCPPAV 133


>gb|EOX98001.1| Cryptochrome-interacting basic-helix-loop-helix 1, putative isoform
           2, partial [Theobroma cacao]
          Length = 408

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 27/142 (19%)
 Frame = -3

Query: 581 MKSGFPEMLHFLNSENTEMSVLERQRSRLKWQQQ-------EQLIQPIAYFNEENVQLGS 423
           M    PEML     + ++M+VLERQR+RLKWQQ+       +Q  Q  +YF+E    L  
Sbjct: 1   MNRALPEML-----QCSDMTVLERQRARLKWQQEQLQQQQLQQQEQQQSYFSE----LSG 51

Query: 422 VFSG------------LNGDQGLGELLMGGAMKPDPGIEPGWGDDIRRVL--------SY 303
           VFS             ++GD  LG+++M   +KPDPG+E  W + ++  +         Y
Sbjct: 52  VFSSQPSHVEGFQGGLMSGDSVLGDMVMTRQLKPDPGLETAWPELVKVDMPGMGFGPCGY 111

Query: 302 GNGSELEMGYAIPRTLSCPPNV 237
           GNG   +M YAI RT SCPP V
Sbjct: 112 GNGPSFDMNYAISRTSSCPPAV 133


>gb|EOX98000.1| Cryptochrome-interacting basic-helix-loop-helix 1, putative isoform
           1 [Theobroma cacao]
          Length = 440

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 27/142 (19%)
 Frame = -3

Query: 581 MKSGFPEMLHFLNSENTEMSVLERQRSRLKWQQQ-------EQLIQPIAYFNEENVQLGS 423
           M    PEML     + ++M+VLERQR+RLKWQQ+       +Q  Q  +YF+E    L  
Sbjct: 1   MNRALPEML-----QCSDMTVLERQRARLKWQQEQLQQQQLQQQEQQQSYFSE----LSG 51

Query: 422 VFSG------------LNGDQGLGELLMGGAMKPDPGIEPGWGDDIRRVL--------SY 303
           VFS             ++GD  LG+++M   +KPDPG+E  W + ++  +         Y
Sbjct: 52  VFSSQPSHVEGFQGGLMSGDSVLGDMVMTRQLKPDPGLETAWPELVKVDMPGMGFGPCGY 111

Query: 302 GNGSELEMGYAIPRTLSCPPNV 237
           GNG   +M YAI RT SCPP V
Sbjct: 112 GNGPSFDMNYAISRTSSCPPAV 133


>ref|XP_006365113.1| PREDICTED: transcription factor bHLH64-like [Solanum tuberosum]
          Length = 442

 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 67/201 (33%), Positives = 85/201 (42%), Gaps = 28/201 (13%)
 Frame = -3

Query: 581 MKSGFPEMLHFLNSEN--TEMSVLERQRSRLKWQQQEQLIQPIAYFNEENVQLGSVFSGL 408
           M    PEMLH   + N     SVLERQ +R+KW Q++   Q ++YFN +N QL S F   
Sbjct: 1   MNIALPEMLHNNTTSNGGNGSSVLERQPARMKWHQEQVQQQEMSYFNGQNDQLMSSFHQT 60

Query: 407 N-----------GDQGLGELLMGGAMKPDPGIEPGWGDDIRRVLSYGNG----------- 294
           +            DQ L EL+   A+KPDP +E  W DD     + G G           
Sbjct: 61  SEAQQFHGLINVNDQSLNELVT-RAIKPDPCMENNW-DDFGTTDNNGFGYVPVGVGHGGM 118

Query: 293 -SELEMGYAIPRTLSCPPNVXXXXXXXXXXXXXXXXXXXXXXXXXADKTPNLKVVAXXXX 117
               EM YAI RT SCPP +                         ADK  +LK VA    
Sbjct: 119 SHPTEMNYAISRTTSCPPTMADNAVKSKETMLSSNRGSENFKKRKADKNQHLKEVAEEET 178

Query: 116 XXXXXKGC---GEDESKITEQ 63
                K C   G+D SK+T +
Sbjct: 179 KDKKLKECIEEGDDSSKVTTE 199


>ref|XP_004289668.1| PREDICTED: transcription factor bHLH63-like [Fragaria vesca subsp.
           vesca]
          Length = 422

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 69/196 (35%), Positives = 87/196 (44%), Gaps = 23/196 (11%)
 Frame = -3

Query: 581 MKSGFPEMLHFLNSEN-------TEMSVLERQRSRLKWQQQEQLIQPIAYFNEENVQLGS 423
           M    PEML+ +N+         T+M+VL+RQR+R+KWQQ +   Q   YF     +L  
Sbjct: 1   MNRALPEMLNCMNAPGSLVAGNCTDMTVLDRQRARMKWQQDQFQQQQQGYFGGN--ELNG 58

Query: 422 VFSGL-------NGDQGL----GELLMGGAMKPDPGIEPGWGDDIRRVLSYGN-GSELEM 279
           VFS +          QGL    G+L MG A+KPDP  E GW +     L YG+ G E+  
Sbjct: 59  VFSHMPIQASQVQSFQGLIGLGGDLGMGQAVKPDPSSENGWTE-----LGYGSCGFEMN- 112

Query: 278 GYAIPRTLSCPPNV---XXXXXXXXXXXXXXXXXXXXXXXXXADKTPNLKVVAXXXXXXX 108
              I RT SCPP V                            ADK  N K V        
Sbjct: 113 --NIARTFSCPPKVAAETKSNNAVASPKISSPAGKESFKKRKADKAQNNKAVGEDDSSDK 170

Query: 107 XXKGCGED-ESKITEQ 63
             KGC E+ +SKITEQ
Sbjct: 171 RMKGCAEEGDSKITEQ 186


>ref|XP_006469145.1| PREDICTED: transcription factor bHLH63-like isoform X1 [Citrus
           sinensis]
          Length = 440

 Score = 69.7 bits (169), Expect = 7e-10
 Identities = 52/126 (41%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
 Frame = -3

Query: 566 PEMLHFLNSENTEMSVLERQRSRLKWQ-------QQEQLIQPIAYFNEENVQLGSV--FS 414
           PEMLH       +++VLERQR+RLKWQ       QQ+Q +Q   +  ++  Q   V  FS
Sbjct: 9   PEMLHC-----ADITVLERQRARLKWQQDQLQQPQQQQELQQQQHQEQQQQQQQEVRYFS 63

Query: 413 GLNG--DQGL--GELLMGGAMKPDPGIEPGW---GDDIRRVLSYGNGSELEMGYAIPRTL 255
            L+    QG   G L+MG  +KPDP  E GW   G  +     YG G   E  YAI RT 
Sbjct: 64  ELSQLISQGYDEGGLMMGQQVKPDPAFENGWPDLGKIVAPAAGYGFGPGFEASYAISRTS 123

Query: 254 SCPPNV 237
           S PP V
Sbjct: 124 SSPPAV 129


>ref|XP_006423284.1| hypothetical protein CICLE_v10028494mg [Citrus clementina]
           gi|557525218|gb|ESR36524.1| hypothetical protein
           CICLE_v10028494mg [Citrus clementina]
          Length = 430

 Score = 69.7 bits (169), Expect = 7e-10
 Identities = 52/126 (41%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
 Frame = -3

Query: 566 PEMLHFLNSENTEMSVLERQRSRLKWQ-------QQEQLIQPIAYFNEENVQLGSV--FS 414
           PEMLH       +++VLERQR+RLKWQ       QQ+Q +Q   +  ++  Q   V  FS
Sbjct: 9   PEMLHC-----ADITVLERQRARLKWQQDQLQQPQQQQELQQQQHQEQQQQQQQEVRYFS 63

Query: 413 GLNG--DQGL--GELLMGGAMKPDPGIEPGW---GDDIRRVLSYGNGSELEMGYAIPRTL 255
            L+    QG   G L+MG  +KPDP  E GW   G  +     YG G   E  YAI RT 
Sbjct: 64  ELSQLISQGYDEGGLMMGQQVKPDPAFENGWPDLGKIVAPAAGYGFGPGFEASYAISRTS 123

Query: 254 SCPPNV 237
           S PP V
Sbjct: 124 SSPPAV 129


>gb|EXB37137.1| hypothetical protein L484_018560 [Morus notabilis]
          Length = 470

 Score = 69.3 bits (168), Expect = 9e-10
 Identities = 56/150 (37%), Positives = 69/150 (46%), Gaps = 35/150 (23%)
 Frame = -3

Query: 581 MKSGFPEMLHFLNSEN-------TEMSVLERQRSRLKW-----QQQEQLIQPIAYFNEEN 438
           M    PEMLH LNS         T+M+VL+RQR+RLKW     QQ+EQ  Q   YFN  +
Sbjct: 1   MNRTLPEMLHCLNSVGNLLAGNCTDMTVLDRQRARLKWQQEQLQQEEQQQQQDGYFNGSD 60

Query: 437 VQLGSVF------SGLNGDQGL-------GELLMGGAMKPDPGIEPGWGDDIRRVLS--- 306
            QL  +F          G QGL       G+      +KPDP +E GW +  R  +S   
Sbjct: 61  -QLNGIFFNPAQAGQFPGFQGLVGGVSVIGDTTANRPVKPDPSLENGWSELDRFEMSGIG 119

Query: 305 -------YGNGSELEMGYAIPRTLSCPPNV 237
                    NG   +M  AI RT S PP V
Sbjct: 120 FGSSATGLANGPGFQMTGAISRTSSSPPTV 149


>ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
          Length = 456

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 72/212 (33%), Positives = 90/212 (42%), Gaps = 39/212 (18%)
 Frame = -3

Query: 584 LMKSGFPEMLHFLNSEN------TEMSVLERQRSRLKWQ----QQEQLIQPIAYFNEENV 435
           +M    PEMLH L++        T+M+V ERQR R+KWQ    QQ+Q  Q  +YF     
Sbjct: 1   MMNMASPEMLHCLSTSGNVAGNGTDMTVFERQRVRMKWQQEQFQQQQQQQQQSYFGGNEF 60

Query: 434 QLGSV---------FSGL-NGDQ-GLGELLMGGAMKPDPGIE-----------PGWGDDI 321
            + S+         F GL NGD  G+G+LL G A+K DPG+E           PG G ++
Sbjct: 61  SMFSMGGQVGQAQQFHGLINGDSAGVGDLL-GRAVKADPGLENVWPEFGKLTMPGTGFNV 119

Query: 320 RRV----LSYGNGSELEMGYAIPRTLSCP--PNVXXXXXXXXXXXXXXXXXXXXXXXXXA 159
                      N S  EM +   RT SCP                              A
Sbjct: 120 ENAGFESAGILNCSGFEMNHTTSRTSSCPLAAAEAKVRESVLPEKIASAVGRESFKKRKA 179

Query: 158 DKTPNLKVVAXXXXXXXXXKGCGED-ESKITE 66
           DK  + KVVA         KGC ED ESKITE
Sbjct: 180 DKVQSPKVVAEEETKDKRIKGCAEDGESKITE 211


>ref|XP_004230908.1| PREDICTED: transcription factor bHLH63-like [Solanum lycopersicum]
          Length = 434

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 67/199 (33%), Positives = 87/199 (43%), Gaps = 26/199 (13%)
 Frame = -3

Query: 581 MKSGFPEMLHFLNSE-NTEMSVLERQRSRLKWQQQEQLIQPIAYFNEENVQL-------- 429
           M    PEMLH + S  ++E+SVL+R     KWQ Q+Q    ++YFN +N QL        
Sbjct: 1   MNIALPEMLHNITSNGSSELSVLDRT----KWQVQQQ---EMSYFNGQNDQLMNSFHQTA 53

Query: 428 -GSVFSGLNG--DQGLGELLMGGAMKPDPGIEPGWG----------DDIRRVLSYGNGSE 288
               F GL    DQ L EL+   A+KPDP +E  WG          D +   + +G  S 
Sbjct: 54  EAQQFHGLINVNDQSLNELVTR-AIKPDPCMENSWGGFGTTGTNGFDYVPVGVGHGGMSH 112

Query: 287 -LEMGYAIPRTLSCPPNVXXXXXXXXXXXXXXXXXXXXXXXXXADKTPNLKVVAXXXXXX 111
             EM YAI RT SCPP +                         ADK  +LK VA      
Sbjct: 113 PSEMNYAISRTTSCPPTMADNVVKPKDTRLSSNRGRESFKKRKADKNQHLKEVAEEETKD 172

Query: 110 XXXKGCGEDE---SKITEQ 63
              K C E+E   SK+T +
Sbjct: 173 KKLKECIEEEDDSSKVTTE 191


>ref|XP_006469146.1| PREDICTED: transcription factor bHLH63-like isoform X2 [Citrus
           sinensis]
          Length = 430

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 47/114 (41%), Positives = 60/114 (52%), Gaps = 16/114 (14%)
 Frame = -3

Query: 530 EMSVLERQRSRLKWQ-------QQEQLIQPIAYFNEENVQLGSV--FSGLNG--DQGL-- 390
           +++VLERQR+RLKWQ       QQ+Q +Q   +  ++  Q   V  FS L+    QG   
Sbjct: 6   DITVLERQRARLKWQQDQLQQPQQQQELQQQQHQEQQQQQQQEVRYFSELSQLISQGYDE 65

Query: 389 GELLMGGAMKPDPGIEPGW---GDDIRRVLSYGNGSELEMGYAIPRTLSCPPNV 237
           G L+MG  +KPDP  E GW   G  +     YG G   E  YAI RT S PP V
Sbjct: 66  GGLMMGQQVKPDPAFENGWPDLGKIVAPAAGYGFGPGFEASYAISRTSSSPPAV 119


>ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
          Length = 456

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 51/144 (35%), Positives = 68/144 (47%), Gaps = 28/144 (19%)
 Frame = -3

Query: 584 LMKSGFPEMLHFLNSENT---EMSVLERQRSRLKWQQQEQLIQPIAYFNEENVQLGSVF- 417
           +M    PEMLH LNS       +SVLERQR+RLKWQQ     QP+          G  F 
Sbjct: 1   MMNRALPEMLHCLNSTGNCSDTLSVLERQRARLKWQQDMLFQQPLNQSCFSRADYGGGFP 60

Query: 416 --------------SGLNGDQGLG------ELLMGGAMKPDPGIEPGWGD----DIRRVL 309
                           ++G  G+G      E++M GA+KPDPG+E GW +    D   +L
Sbjct: 61  PPVSVPADHLTGFPGYMSGGGGVGGGLSHVEMVM-GAVKPDPGLEDGWSEMGKFDPSLLL 119

Query: 308 SYGNGSELEMGYAIPRTLSCPPNV 237
              N +  E+  ++ RT SC P V
Sbjct: 120 ---NPTACELNSSLSRTSSCLPVV 140


>ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
          Length = 523

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 51/144 (35%), Positives = 68/144 (47%), Gaps = 28/144 (19%)
 Frame = -3

Query: 584 LMKSGFPEMLHFLNSENT---EMSVLERQRSRLKWQQQEQLIQPIAYFNEENVQLGSVF- 417
           +M    PEMLH LNS       +SVLERQR+RLKWQQ     QP+          G  F 
Sbjct: 1   MMNRALPEMLHCLNSTGNCSDTLSVLERQRARLKWQQDMLFQQPLNQSCFSRADYGGGFP 60

Query: 416 --------------SGLNGDQGLG------ELLMGGAMKPDPGIEPGWGD----DIRRVL 309
                           ++G  G+G      E++M GA+KPDPG+E GW +    D   +L
Sbjct: 61  PPVSVPADHLTGFPGYMSGGGGVGGGLSHVEMVM-GAVKPDPGLEDGWSEMGKFDPSLLL 119

Query: 308 SYGNGSELEMGYAIPRTLSCPPNV 237
              N +  E+  ++ RT SC P V
Sbjct: 120 ---NPTACELNSSLSRTSSCLPVV 140


>ref|XP_002313497.2| hypothetical protein POPTR_0009s12000g [Populus trichocarpa]
           gi|550331556|gb|EEE87452.2| hypothetical protein
           POPTR_0009s12000g [Populus trichocarpa]
          Length = 440

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 62/194 (31%), Positives = 84/194 (43%), Gaps = 19/194 (9%)
 Frame = -3

Query: 587 LLMKSGFPEMLHFLNSENTEMSVLERQRSRLKWQQQEQLIQPIAYFNEE---NVQLGSVF 417
           LL   G   MLH      T+++VLERQR+ +KWQQ++Q  Q +    +E     +L  VF
Sbjct: 6   LLPAGGGENMLHC-----TDITVLERQRACIKWQQEQQQQQQVQLQQQEISYFTELTGVF 60

Query: 416 SGLNGDQGLGELLMGGAMKPDPG-IEPGWGDDIRRVLS----YGNGSELEMGY-AIPRTL 255
                 +G    ++  ++KPDPG ++ GW +D    L     Y NGS  E+ Y AI R  
Sbjct: 61  QQAGFHEGGLSEVVTRSVKPDPGLVDNGWNNDHVVGLGVGPLYDNGSGFELNYGAISRIS 120

Query: 254 SCPP---------NVXXXXXXXXXXXXXXXXXXXXXXXXXADKTPNLKVVAXXXXXXXXX 102
           SCPP          V                          +K  N KV A         
Sbjct: 121 SCPPAAVAAVAAATVKGSESVVSDKISSGVGRESSKKRKVDNKQNNSKVDAEEDTRDKRI 180

Query: 101 KGCGED-ESKITEQ 63
           KGC E+ ESKITE+
Sbjct: 181 KGCAEEGESKITEK 194


>ref|XP_002313791.1| basic helix-loop-helix family protein [Populus trichocarpa]
           gi|222850199|gb|EEE87746.1| basic helix-loop-helix
           family protein [Populus trichocarpa]
          Length = 439

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 62/194 (31%), Positives = 84/194 (43%), Gaps = 19/194 (9%)
 Frame = -3

Query: 587 LLMKSGFPEMLHFLNSENTEMSVLERQRSRLKWQQQEQLIQPIAYFNEE---NVQLGSVF 417
           LL   G   MLH      T+++VLERQR+ +KWQQ++Q  Q +    +E     +L  VF
Sbjct: 6   LLPAGGGENMLHC-----TDITVLERQRACIKWQQEQQQQQQVQLQQQEISYFTELTGVF 60

Query: 416 SGLNGDQGLGELLMGGAMKPDPG-IEPGWGDDIRRVLS----YGNGSELEMGY-AIPRTL 255
                 +G    ++  ++KPDPG ++ GW +D    L     Y NGS  E+ Y AI R  
Sbjct: 61  QQAGFHEGGLSEVVTRSVKPDPGLVDNGWNNDHVVGLGVGPLYDNGSGFELNYGAISRIS 120

Query: 254 SCPP---------NVXXXXXXXXXXXXXXXXXXXXXXXXXADKTPNLKVVAXXXXXXXXX 102
           SCPP          V                          +K  N KV A         
Sbjct: 121 SCPPAAVAAVAAATVKGSESVVSDKISSGVGRESSKKRKVDNKQNNSKVDAEEDTRDKRI 180

Query: 101 KGCGED-ESKITEQ 63
           KGC E+ ESKITE+
Sbjct: 181 KGCAEEGESKITEK 194


>ref|XP_002305434.2| hypothetical protein POPTR_0004s16330g [Populus trichocarpa]
           gi|550341152|gb|EEE85945.2| hypothetical protein
           POPTR_0004s16330g [Populus trichocarpa]
          Length = 413

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 44/113 (38%), Positives = 64/113 (56%), Gaps = 14/113 (12%)
 Frame = -3

Query: 533 TEMSVLERQRSRLKWQQQEQL------IQPIAYFNEENVQLGSVFSGLNGDQGLGELLMG 372
           T+M+VL+RQR+R+KWQQ++Q        Q I+YF+E    L  VF      +G    ++ 
Sbjct: 5   TDMTVLDRQRARIKWQQEQQQHQVQLPQQEISYFSE----LSRVFQQAGFHEGGLSEVVT 60

Query: 371 GAMKPDPG-IEPGWGDDIRRVLSYG------NGSELEMGY-AIPRTLSCPPNV 237
            ++KPDPG ++  W +D   V+ +G      NG   E+ Y AI RT SCPP V
Sbjct: 61  RSVKPDPGFVDNRWHND--HVVGFGVGPPYTNGLGFELNYGAISRTSSCPPAV 111


>ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
           gi|223547923|gb|EEF49415.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 444

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 49/129 (37%), Positives = 71/129 (55%), Gaps = 19/129 (14%)
 Frame = -3

Query: 566 PEMLHFLNSENTEMSVLERQRSRLKWQQQEQLIQPIAYFNE----ENVQLGSVF------ 417
           PEMLH      T+++VLERQR+RLKWQQ++Q +Q   + ++    EN  LG +       
Sbjct: 7   PEMLHC-----TDLTVLERQRARLKWQQEQQHLQLEQHQHQHHQGENYFLGDLSGVFQLQ 61

Query: 416 ------SGLNGDQGLGELLMGGAMKPDPG-IEPG-WGD-DIRRVLSYGNGSELEMGYAIP 264
                  G  GD  LGE+++  ++KPDPG ++ G W +     ++ YG      M +AI 
Sbjct: 62  QQQQQQQGFQGD--LGEVVI-RSVKPDPGFLDNGCWSNTSSTDLVGYGPCGFGNMNFAIS 118

Query: 263 RTLSCPPNV 237
           RT SCPP V
Sbjct: 119 RTSSCPPTV 127


>gb|EOX98003.1| Cryptochrome-interacting basic-helix-loop-helix 1, putative isoform
           4 [Theobroma cacao]
          Length = 319

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 8/66 (12%)
 Frame = -3

Query: 410 LNGDQGLGELLMGGAMKPDPGIEPGWGDDIRRVL--------SYGNGSELEMGYAIPRTL 255
           ++GD  LG+++M   +KPDPG+E  W + ++  +         YGNG   +M YAI RT 
Sbjct: 1   MSGDSVLGDMVMTRQLKPDPGLETAWPELVKVDMPGMGFGPCGYGNGPSFDMNYAISRTS 60

Query: 254 SCPPNV 237
           SCPP V
Sbjct: 61  SCPPAV 66