BLASTX nr result

ID: Rehmannia25_contig00011771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00011771
         (328 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004506427.1| PREDICTED: splicing factor U2af large subuni...    86   7e-15
sp|Q9ZR39.1|U2A2A_NICPL RecName: Full=Splicing factor U2af large...    85   9e-15
ref|XP_006353521.1| PREDICTED: splicing factor U2af large subuni...    85   1e-14
ref|XP_006353520.1| PREDICTED: splicing factor U2af large subuni...    85   1e-14
ref|XP_006353517.1| PREDICTED: splicing factor U2af large subuni...    85   1e-14
ref|XP_006466768.1| PREDICTED: splicing factor U2af large subuni...    84   2e-14
ref|XP_006466767.1| PREDICTED: splicing factor U2af large subuni...    84   2e-14
ref|XP_006466765.1| PREDICTED: splicing factor U2af large subuni...    84   2e-14
ref|XP_006466764.1| PREDICTED: splicing factor U2af large subuni...    84   2e-14
ref|XP_006425715.1| hypothetical protein CICLE_v10025221mg [Citr...    84   2e-14
ref|XP_006425714.1| hypothetical protein CICLE_v10025221mg [Citr...    84   2e-14
ref|XP_003598049.1| Splicing factor U2af large subunit B [Medica...    84   2e-14
ref|XP_003598048.1| Splicing factor U2af large subunit B [Medica...    84   2e-14
ref|XP_003598047.1| Splicing factor U2af large subunit B [Medica...    84   2e-14
ref|XP_003589450.1| Splicing factor U2af large subunit B [Medica...    84   2e-14
gb|EPS64699.1| hypothetical protein M569_10077, partial [Genlise...    84   2e-14
ref|XP_004499573.1| PREDICTED: splicing factor U2af large subuni...    84   3e-14
ref|XP_004499572.1| PREDICTED: splicing factor U2af large subuni...    84   3e-14
ref|XP_006363146.1| PREDICTED: splicing factor U2af large subuni...    83   4e-14
ref|XP_006363145.1| PREDICTED: splicing factor U2af large subuni...    83   4e-14

>ref|XP_004506427.1| PREDICTED: splicing factor U2af large subunit B-like [Cicer
           arietinum]
          Length = 576

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 38/45 (84%), Positives = 41/45 (91%)
 Frame = +3

Query: 3   VFLEYADTEGATKARQGLNGRKFGGNEVVAVFYPENKFSEGDYSG 137
           VFLEY D EGATKAR GLNGRKFGGNEV+AVFYPENKF++GDY G
Sbjct: 532 VFLEYVDIEGATKARTGLNGRKFGGNEVIAVFYPENKFAQGDYEG 576


>sp|Q9ZR39.1|U2A2A_NICPL RecName: Full=Splicing factor U2af large subunit A; AltName:
           Full=NpU2AF65a; AltName: Full=U2 auxiliary factor 65 kDa
           subunit A; AltName: Full=U2 small nuclear
           ribonucleoprotein auxiliary factor large subunit A;
           Short=U2 snRNP auxiliary factor large subunit A
           gi|3850823|emb|CAA77136.1| U2 snRNP auxiliary factor,
           large subunit [Nicotiana plumbaginifolia]
          Length = 555

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 38/43 (88%), Positives = 42/43 (97%)
 Frame = +3

Query: 3   VFLEYADTEGATKARQGLNGRKFGGNEVVAVFYPENKFSEGDY 131
           VFLEYAD +G++KARQGLNGRKFGGN+VVAVFYPENKFSEGDY
Sbjct: 511 VFLEYADVDGSSKARQGLNGRKFGGNQVVAVFYPENKFSEGDY 553


>ref|XP_006353521.1| PREDICTED: splicing factor U2af large subunit B-like isoform X5
           [Solanum tuberosum] gi|565373936|ref|XP_006353522.1|
           PREDICTED: splicing factor U2af large subunit B-like
           isoform X6 [Solanum tuberosum]
          Length = 367

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 38/45 (84%), Positives = 42/45 (93%)
 Frame = +3

Query: 3   VFLEYADTEGATKARQGLNGRKFGGNEVVAVFYPENKFSEGDYSG 137
           VFLEYAD E +++A+QGLNGRKFGGNEVVAVFYPENKFSEGDY G
Sbjct: 323 VFLEYADVESSSRAQQGLNGRKFGGNEVVAVFYPENKFSEGDYEG 367


>ref|XP_006353520.1| PREDICTED: splicing factor U2af large subunit B-like isoform X4
           [Solanum tuberosum]
          Length = 602

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 38/45 (84%), Positives = 42/45 (93%)
 Frame = +3

Query: 3   VFLEYADTEGATKARQGLNGRKFGGNEVVAVFYPENKFSEGDYSG 137
           VFLEYAD E +++A+QGLNGRKFGGNEVVAVFYPENKFSEGDY G
Sbjct: 558 VFLEYADVESSSRAQQGLNGRKFGGNEVVAVFYPENKFSEGDYEG 602


>ref|XP_006353517.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
           [Solanum tuberosum] gi|565373928|ref|XP_006353518.1|
           PREDICTED: splicing factor U2af large subunit B-like
           isoform X2 [Solanum tuberosum]
           gi|565373930|ref|XP_006353519.1| PREDICTED: splicing
           factor U2af large subunit B-like isoform X3 [Solanum
           tuberosum]
          Length = 605

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 38/45 (84%), Positives = 42/45 (93%)
 Frame = +3

Query: 3   VFLEYADTEGATKARQGLNGRKFGGNEVVAVFYPENKFSEGDYSG 137
           VFLEYAD E +++A+QGLNGRKFGGNEVVAVFYPENKFSEGDY G
Sbjct: 561 VFLEYADVESSSRAQQGLNGRKFGGNEVVAVFYPENKFSEGDYEG 605


>ref|XP_006466768.1| PREDICTED: splicing factor U2af large subunit B-like isoform X6
           [Citrus sinensis]
          Length = 368

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 37/45 (82%), Positives = 42/45 (93%)
 Frame = +3

Query: 3   VFLEYADTEGATKARQGLNGRKFGGNEVVAVFYPENKFSEGDYSG 137
           VFLEYAD +GATKAR G+NGRKFGGN+VVAVFYPENKF++GDY G
Sbjct: 324 VFLEYADIDGATKARTGMNGRKFGGNQVVAVFYPENKFAQGDYEG 368


>ref|XP_006466767.1| PREDICTED: splicing factor U2af large subunit B-like isoform X5
           [Citrus sinensis]
          Length = 380

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 37/45 (82%), Positives = 42/45 (93%)
 Frame = +3

Query: 3   VFLEYADTEGATKARQGLNGRKFGGNEVVAVFYPENKFSEGDYSG 137
           VFLEYAD +GATKAR G+NGRKFGGN+VVAVFYPENKF++GDY G
Sbjct: 336 VFLEYADIDGATKARTGMNGRKFGGNQVVAVFYPENKFAQGDYEG 380


>ref|XP_006466765.1| PREDICTED: splicing factor U2af large subunit B-like isoform X3
           [Citrus sinensis] gi|568824768|ref|XP_006466766.1|
           PREDICTED: splicing factor U2af large subunit B-like
           isoform X4 [Citrus sinensis]
          Length = 394

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 37/45 (82%), Positives = 42/45 (93%)
 Frame = +3

Query: 3   VFLEYADTEGATKARQGLNGRKFGGNEVVAVFYPENKFSEGDYSG 137
           VFLEYAD +GATKAR G+NGRKFGGN+VVAVFYPENKF++GDY G
Sbjct: 350 VFLEYADIDGATKARTGMNGRKFGGNQVVAVFYPENKFAQGDYEG 394


>ref|XP_006466764.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
           [Citrus sinensis]
          Length = 581

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 37/45 (82%), Positives = 42/45 (93%)
 Frame = +3

Query: 3   VFLEYADTEGATKARQGLNGRKFGGNEVVAVFYPENKFSEGDYSG 137
           VFLEYAD +GATKAR G+NGRKFGGN+VVAVFYPENKF++GDY G
Sbjct: 537 VFLEYADIDGATKARTGMNGRKFGGNQVVAVFYPENKFAQGDYEG 581


>ref|XP_006425715.1| hypothetical protein CICLE_v10025221mg [Citrus clementina]
           gi|557527705|gb|ESR38955.1| hypothetical protein
           CICLE_v10025221mg [Citrus clementina]
          Length = 592

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 37/45 (82%), Positives = 42/45 (93%)
 Frame = +3

Query: 3   VFLEYADTEGATKARQGLNGRKFGGNEVVAVFYPENKFSEGDYSG 137
           VFLEYAD +GATKAR G+NGRKFGGN+VVAVFYPENKF++GDY G
Sbjct: 548 VFLEYADIDGATKARTGMNGRKFGGNQVVAVFYPENKFAQGDYEG 592


>ref|XP_006425714.1| hypothetical protein CICLE_v10025221mg [Citrus clementina]
           gi|568824761|ref|XP_006466763.1| PREDICTED: splicing
           factor U2af large subunit B-like isoform X1 [Citrus
           sinensis] gi|557527704|gb|ESR38954.1| hypothetical
           protein CICLE_v10025221mg [Citrus clementina]
          Length = 593

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 37/45 (82%), Positives = 42/45 (93%)
 Frame = +3

Query: 3   VFLEYADTEGATKARQGLNGRKFGGNEVVAVFYPENKFSEGDYSG 137
           VFLEYAD +GATKAR G+NGRKFGGN+VVAVFYPENKF++GDY G
Sbjct: 549 VFLEYADIDGATKARTGMNGRKFGGNQVVAVFYPENKFAQGDYEG 593


>ref|XP_003598049.1| Splicing factor U2af large subunit B [Medicago truncatula]
           gi|355487097|gb|AES68300.1| Splicing factor U2af large
           subunit B [Medicago truncatula]
          Length = 627

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 36/45 (80%), Positives = 42/45 (93%)
 Frame = +3

Query: 3   VFLEYADTEGATKARQGLNGRKFGGNEVVAVFYPENKFSEGDYSG 137
           VFLEYAD +G+TKAR GLNGRKFGGN+V+AVFYPENKF++GDY G
Sbjct: 583 VFLEYADVDGSTKARSGLNGRKFGGNQVIAVFYPENKFAQGDYEG 627


>ref|XP_003598048.1| Splicing factor U2af large subunit B [Medicago truncatula]
           gi|355487096|gb|AES68299.1| Splicing factor U2af large
           subunit B [Medicago truncatula]
          Length = 629

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 36/45 (80%), Positives = 42/45 (93%)
 Frame = +3

Query: 3   VFLEYADTEGATKARQGLNGRKFGGNEVVAVFYPENKFSEGDYSG 137
           VFLEYAD +G+TKAR GLNGRKFGGN+V+AVFYPENKF++GDY G
Sbjct: 585 VFLEYADVDGSTKARSGLNGRKFGGNQVIAVFYPENKFAQGDYEG 629


>ref|XP_003598047.1| Splicing factor U2af large subunit B [Medicago truncatula]
           gi|355487095|gb|AES68298.1| Splicing factor U2af large
           subunit B [Medicago truncatula]
          Length = 626

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 36/45 (80%), Positives = 42/45 (93%)
 Frame = +3

Query: 3   VFLEYADTEGATKARQGLNGRKFGGNEVVAVFYPENKFSEGDYSG 137
           VFLEYAD +G+TKAR GLNGRKFGGN+V+AVFYPENKF++GDY G
Sbjct: 582 VFLEYADVDGSTKARSGLNGRKFGGNQVIAVFYPENKFAQGDYEG 626


>ref|XP_003589450.1| Splicing factor U2af large subunit B [Medicago truncatula]
           gi|355478498|gb|AES59701.1| Splicing factor U2af large
           subunit B [Medicago truncatula]
          Length = 611

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 36/45 (80%), Positives = 42/45 (93%)
 Frame = +3

Query: 3   VFLEYADTEGATKARQGLNGRKFGGNEVVAVFYPENKFSEGDYSG 137
           VFLEYAD +G+TKAR GLNGRKFGGN+V+AVFYPENKF++GDY G
Sbjct: 567 VFLEYADVDGSTKARSGLNGRKFGGNQVIAVFYPENKFAQGDYEG 611


>gb|EPS64699.1| hypothetical protein M569_10077, partial [Genlisea aurea]
          Length = 529

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 38/43 (88%), Positives = 40/43 (93%)
 Frame = +3

Query: 3   VFLEYADTEGATKARQGLNGRKFGGNEVVAVFYPENKFSEGDY 131
           VFLEYAD E AT+ARQGLNGRKFGGN+VV VFYPENKFSEGDY
Sbjct: 487 VFLEYADVESATRARQGLNGRKFGGNQVVGVFYPENKFSEGDY 529


>ref|XP_004499573.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
           [Cicer arietinum]
          Length = 621

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 36/45 (80%), Positives = 42/45 (93%)
 Frame = +3

Query: 3   VFLEYADTEGATKARQGLNGRKFGGNEVVAVFYPENKFSEGDYSG 137
           VFLEYAD +G+TKAR GLNGRKFGGN+V+AVFYPENKF++GDY G
Sbjct: 577 VFLEYADVDGSTKARGGLNGRKFGGNQVIAVFYPENKFAQGDYEG 621


>ref|XP_004499572.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
           [Cicer arietinum]
          Length = 623

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 36/45 (80%), Positives = 42/45 (93%)
 Frame = +3

Query: 3   VFLEYADTEGATKARQGLNGRKFGGNEVVAVFYPENKFSEGDYSG 137
           VFLEYAD +G+TKAR GLNGRKFGGN+V+AVFYPENKF++GDY G
Sbjct: 579 VFLEYADVDGSTKARGGLNGRKFGGNQVIAVFYPENKFAQGDYEG 623


>ref|XP_006363146.1| PREDICTED: splicing factor U2af large subunit A-like isoform X2
           [Solanum tuberosum]
          Length = 367

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 37/43 (86%), Positives = 41/43 (95%)
 Frame = +3

Query: 3   VFLEYADTEGATKARQGLNGRKFGGNEVVAVFYPENKFSEGDY 131
           VFLEYAD + ++KARQGLNGRKFGGN+VVAVFYPENKFSEGDY
Sbjct: 323 VFLEYADVDSSSKARQGLNGRKFGGNQVVAVFYPENKFSEGDY 365


>ref|XP_006363145.1| PREDICTED: splicing factor U2af large subunit A-like isoform X1
           [Solanum tuberosum]
          Length = 556

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 37/43 (86%), Positives = 41/43 (95%)
 Frame = +3

Query: 3   VFLEYADTEGATKARQGLNGRKFGGNEVVAVFYPENKFSEGDY 131
           VFLEYAD + ++KARQGLNGRKFGGN+VVAVFYPENKFSEGDY
Sbjct: 512 VFLEYADVDSSSKARQGLNGRKFGGNQVVAVFYPENKFSEGDY 554


Top