BLASTX nr result
ID: Rehmannia25_contig00011635
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00011635
(496 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB90004.1| hypothetical protein L484_023657 [Morus notabilis] 138 9e-31
ref|XP_002330082.1| predicted protein [Populus trichocarpa] 136 2e-30
gb|EMJ08247.1| hypothetical protein PRUPE_ppb025182mg [Prunus pe... 130 2e-28
ref|XP_002512521.1| pentatricopeptide repeat-containing protein,... 130 2e-28
ref|XP_004304899.1| PREDICTED: pentatricopeptide repeat-containi... 124 1e-26
ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containi... 114 1e-23
emb|CBI39605.3| unnamed protein product [Vitis vinifera] 114 1e-23
ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containi... 114 2e-23
emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera] 114 2e-23
ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containi... 113 3e-23
ref|XP_006841470.1| hypothetical protein AMTR_s00003p00103190 [A... 70 3e-10
ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi... 65 9e-09
emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera] 65 9e-09
gb|EXB86239.1| hypothetical protein L484_005950 [Morus notabilis] 64 2e-08
ref|XP_006475804.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
ref|XP_006450982.1| hypothetical protein CICLE_v10010823mg [Citr... 64 2e-08
emb|CBI27471.3| unnamed protein product [Vitis vinifera] 63 3e-08
ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containi... 63 3e-08
emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera] 63 3e-08
gb|EMJ05156.1| hypothetical protein PRUPE_ppa022872mg [Prunus pe... 62 1e-07
>gb|EXB90004.1| hypothetical protein L484_023657 [Morus notabilis]
Length = 616
Score = 138 bits (347), Expect = 9e-31
Identities = 66/112 (58%), Positives = 81/112 (72%)
Frame = +3
Query: 153 TATTTELLYHPPPAEHSTENFTTSNPSQKTILHLLNTKCISSLENLKQAHALILKTGYLQ 332
T TTT L YH P E STE TS SQKTIL L+NTKC +SL LKQAHAL+L++G+ Q
Sbjct: 32 TITTTNLPYHFKPTELSTETIPTSKLSQKTILDLINTKCSNSLHYLKQAHALVLRSGHFQ 91
Query: 333 DHYVAGSLIKCYANPHFGNLSNLLQVLEQVSEPNVFVWNNIIKGCLDLREPF 488
DHYV+G+L+K YANPH N + +V + V PNVFVWN +++GCLD EPF
Sbjct: 92 DHYVSGTLLKHYANPHLRNFAFAFKVFDHVPRPNVFVWNILLQGCLDNNEPF 143
>ref|XP_002330082.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 136 bits (343), Expect = 2e-30
Identities = 69/113 (61%), Positives = 82/113 (72%)
Frame = +3
Query: 156 ATTTELLYHPPPAEHSTENFTTSNPSQKTILHLLNTKCISSLENLKQAHALILKTGYLQD 335
+TTT L YH + STEN TS SQKTIL LLNTK +SL +LKQ HA+ L+TG+ QD
Sbjct: 2 STTTNLPYHLASKDFSTENKFTSQLSQKTILDLLNTKSSTSLHHLKQVHAVALRTGHFQD 61
Query: 336 HYVAGSLIKCYANPHFGNLSNLLQVLEQVSEPNVFVWNNIIKGCLDLREPFDA 494
HYV+G+L+KCYANPHF NL+ L+V E V PNVFV+N IIKGCL EP A
Sbjct: 62 HYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKA 114
>gb|EMJ08247.1| hypothetical protein PRUPE_ppb025182mg [Prunus persica]
Length = 672
Score = 130 bits (327), Expect = 2e-28
Identities = 62/111 (55%), Positives = 82/111 (73%), Gaps = 1/111 (0%)
Frame = +3
Query: 153 TATTTELLYHPPPAEHSTENF-TTSNPSQKTILHLLNTKCISSLENLKQAHALILKTGYL 329
+ TTT L +H P E S E+ +TS SQKTILH+LNTKC +SL++LKQAH + L++G+
Sbjct: 4 STTTTNLPHHIKPKEVSAESTASTSKLSQKTILHILNTKCTTSLQHLKQAHGVALRSGHF 63
Query: 330 QDHYVAGSLIKCYANPHFGNLSNLLQVLEQVSEPNVFVWNNIIKGCLDLRE 482
QDHYVAG+++KCYA+ HF N L+V + V PNVFVWN +IKGCL+ E
Sbjct: 64 QDHYVAGAIVKCYASQHFSNFGFALKVFDSVWRPNVFVWNIVIKGCLENNE 114
>ref|XP_002512521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548482|gb|EEF49973.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 422
Score = 130 bits (326), Expect = 2e-28
Identities = 67/117 (57%), Positives = 84/117 (71%), Gaps = 1/117 (0%)
Frame = +3
Query: 147 LHTATTT-ELLYHPPPAEHSTENFTTSNPSQKTILHLLNTKCISSLENLKQAHALILKTG 323
+HTATTT L YH PAE N TS +QKTIL LLN+KC +S + LKQ HA+IL++G
Sbjct: 1 MHTATTTTHLPYHLSPAE----NKPTSKLTQKTILDLLNSKCNASFQYLKQIHAVILRSG 56
Query: 324 YLQDHYVAGSLIKCYANPHFGNLSNLLQVLEQVSEPNVFVWNNIIKGCLDLREPFDA 494
+ +DHYV+G+L+KCYANPHF N+ V + V +PNVFV+N IIK CLD EPF A
Sbjct: 57 HFEDHYVSGTLLKCYANPHFKNIDLAFTVFDHVPKPNVFVYNIIIKACLDNDEPFKA 113
>ref|XP_004304899.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 673
Score = 124 bits (311), Expect = 1e-26
Identities = 58/108 (53%), Positives = 81/108 (75%), Gaps = 1/108 (0%)
Frame = +3
Query: 153 TATTTELLYHPPPAEHSTENFT-TSNPSQKTILHLLNTKCISSLENLKQAHALILKTGYL 329
T TTT L +H P + S E+ T SQKTILH+LN+KC +SL+NLKQAH ++L++G+
Sbjct: 7 TTTTTNLPHHVKPKQASPESKPPTFKLSQKTILHILNSKCTTSLQNLKQAHGVVLRSGHF 66
Query: 330 QDHYVAGSLIKCYANPHFGNLSNLLQVLEQVSEPNVFVWNNIIKGCLD 473
QDHYVAG+++KCYA+ +F N L+V + V +PNVFVWN +IKGC++
Sbjct: 67 QDHYVAGTILKCYASSNFNNFGFALKVFDNVWKPNVFVWNIMIKGCVE 114
>ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 114 bits (286), Expect = 1e-23
Identities = 53/103 (51%), Positives = 72/103 (69%), Gaps = 1/103 (0%)
Frame = +3
Query: 189 PAEHSTE-NFTTSNPSQKTILHLLNTKCISSLENLKQAHALILKTGYLQDHYVAGSLIKC 365
P + S E N TS QKT+L L ++K I+SL+ L Q HAL+L++G+ QDHYV+G+L+KC
Sbjct: 15 PVDFSAEKNIPTSKLPQKTVLKLFDSKSITSLQYLTQLHALVLRSGHFQDHYVSGALLKC 74
Query: 366 YANPHFGNLSNLLQVLEQVSEPNVFVWNNIIKGCLDLREPFDA 494
YANPHF N L+V + PNVF+WN +IKGCL+ + F A
Sbjct: 75 YANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKA 117
>emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 114 bits (285), Expect = 1e-23
Identities = 67/132 (50%), Positives = 86/132 (65%), Gaps = 7/132 (5%)
Frame = +3
Query: 120 PAGQVKMGALHTATT-TELLYHPP---PAEHSTENFTTSNPSQKTILHLLNTKCISSLEN 287
P ++ TATT TE YH P HSTE TS S K ILHLLNT+C +SL +
Sbjct: 14 PLQTIRKRMSSTATTATEAPYHHHHLIPNGHSTE---TSKLSHKAILHLLNTQCTTSLHH 70
Query: 288 LKQAHALILKTGYLQDHYVAGSLIKCYAN---PHFGNLSNLLQVLEQVSEPNVFVWNNII 458
LKQAHALIL+TG+LQD Y+AGSL+K YAN + + + L+V + V +PNVF+WN +I
Sbjct: 71 LKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMI 130
Query: 459 KGCLDLREPFDA 494
K C++ EPF A
Sbjct: 131 KVCIENNEPFKA 142
>ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 114 bits (284), Expect = 2e-23
Identities = 66/121 (54%), Positives = 83/121 (68%), Gaps = 7/121 (5%)
Frame = +3
Query: 153 TATT-TELLYHPP---PAEHSTENFTTSNPSQKTILHLLNTKCISSLENLKQAHALILKT 320
TATT TE YH P HSTE TS S K ILHLLNT+C +SL +LKQAHALIL+T
Sbjct: 4 TATTATEAPYHHHHLIPNGHSTE---TSKLSHKAILHLLNTQCTTSLHHLKQAHALILRT 60
Query: 321 GYLQDHYVAGSLIKCYAN---PHFGNLSNLLQVLEQVSEPNVFVWNNIIKGCLDLREPFD 491
G+LQD Y+AGSL+K YAN + + + L+V + V +PNVF+WN +IK C++ EPF
Sbjct: 61 GHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFK 120
Query: 492 A 494
A
Sbjct: 121 A 121
>emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 114 bits (284), Expect = 2e-23
Identities = 66/122 (54%), Positives = 83/122 (68%), Gaps = 8/122 (6%)
Frame = +3
Query: 153 TATT-TELLYHPP----PAEHSTENFTTSNPSQKTILHLLNTKCISSLENLKQAHALILK 317
TATT TE YH P HSTE TS S K ILHLLNT+C +SL +LKQAHALIL+
Sbjct: 4 TATTATEAPYHHHHHLIPKGHSTE---TSKLSHKAILHLLNTQCTTSLHHLKQAHALILR 60
Query: 318 TGYLQDHYVAGSLIKCYAN---PHFGNLSNLLQVLEQVSEPNVFVWNNIIKGCLDLREPF 488
TG+LQD Y+AGSL+K YAN + + + L+V + V +PNVF+WN +IK C++ EPF
Sbjct: 61 TGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPF 120
Query: 489 DA 494
A
Sbjct: 121 KA 122
>ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 113 bits (282), Expect = 3e-23
Identities = 52/103 (50%), Positives = 71/103 (68%), Gaps = 1/103 (0%)
Frame = +3
Query: 189 PAEHSTE-NFTTSNPSQKTILHLLNTKCISSLENLKQAHALILKTGYLQDHYVAGSLIKC 365
P + S E N TS QKT+L L ++K I+SL+ L Q H L+L++G+ QDHYV+G+L+KC
Sbjct: 15 PVDFSAEKNIPTSKLPQKTVLKLFDSKSITSLQYLTQLHGLVLRSGHFQDHYVSGALLKC 74
Query: 366 YANPHFGNLSNLLQVLEQVSEPNVFVWNNIIKGCLDLREPFDA 494
YANPHF N L+V + PNVF+WN +IKGCL+ + F A
Sbjct: 75 YANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKA 117
>ref|XP_006841470.1| hypothetical protein AMTR_s00003p00103190 [Amborella trichopoda]
gi|548843491|gb|ERN03145.1| hypothetical protein
AMTR_s00003p00103190 [Amborella trichopoda]
Length = 297
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/93 (36%), Positives = 55/93 (59%)
Frame = +3
Query: 189 PAEHSTENFTTSNPSQKTILHLLNTKCISSLENLKQAHALILKTGYLQDHYVAGSLIKCY 368
P+ T+ S P+ + LL +KC +S+ +LKQ HA I + G Q++++ SL+K
Sbjct: 76 PSTSPTKQALISTPTAHQFITLLESKC-TSMNHLKQIHAQITRHGLSQNNFLMASLVKFC 134
Query: 369 ANPHFGNLSNLLQVLEQVSEPNVFVWNNIIKGC 467
A P GNL+ V Q+ +P+ F+WN +I+GC
Sbjct: 135 AEPTSGNLNYARAVFNQLKDPHPFIWNTMIRGC 167
>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 65.1 bits (157), Expect = 9e-09
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
Frame = +3
Query: 156 ATTTELLYHPPPAEHSTENFTTSNPSQKTI-----LHLLNTKCISSLENLKQAHALILKT 320
A+ + L PPP H TS+P K + L LL+T S +NLKQ H+ I+KT
Sbjct: 4 ASFSPSLVMPPPTLHFQP---TSDPPYKLLQNHPSLTLLST--CKSFQNLKQIHSQIIKT 58
Query: 321 GYLQDHYVAGSLIKCYANPHFGNLSNLLQVLEQVSEPNVFVWNNIIKG 464
G + LI+ A FGNLS L + E + +PN F+WN +I+G
Sbjct: 59 GLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRG 106
>emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 65.1 bits (157), Expect = 9e-09
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
Frame = +3
Query: 156 ATTTELLYHPPPAEHSTENFTTSNPSQKTI-----LHLLNTKCISSLENLKQAHALILKT 320
A+ + L PPP H TS+P K + L LL+T S +NLKQ H+ I+KT
Sbjct: 4 ASFSPSLVMPPPTLHFQP---TSDPPYKLLQNHPSLTLLST--CKSFQNLKQIHSQIIKT 58
Query: 321 GYLQDHYVAGSLIKCYANPHFGNLSNLLQVLEQVSEPNVFVWNNIIKG 464
G + LI+ A FGNLS L + E + +PN F+WN +I+G
Sbjct: 59 GLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRG 106
>gb|EXB86239.1| hypothetical protein L484_005950 [Morus notabilis]
Length = 737
Score = 64.3 bits (155), Expect = 2e-08
Identities = 35/96 (36%), Positives = 55/96 (57%)
Frame = +3
Query: 177 YHPPPAEHSTENFTTSNPSQKTILHLLNTKCISSLENLKQAHALILKTGYLQDHYVAGSL 356
+H PP+ S+PS L+LL+ KC SL+ LKQ H I+KTG + + L
Sbjct: 16 FHVPPSSDPPYKLLQSHPS----LNLLS-KC-KSLQTLKQIHTHIIKTGLHKTQFALSKL 69
Query: 357 IKCYANPHFGNLSNLLQVLEQVSEPNVFVWNNIIKG 464
++ + FG+LS L +L+ + EPN F+WN +++G
Sbjct: 70 VEFCSLSPFGDLSYALAILDTIEEPNRFIWNTVLRG 105
>ref|XP_006475804.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Citrus sinensis]
Length = 736
Score = 63.9 bits (154), Expect = 2e-08
Identities = 38/102 (37%), Positives = 56/102 (54%)
Frame = +3
Query: 159 TTTELLYHPPPAEHSTENFTTSNPSQKTILHLLNTKCISSLENLKQAHALILKTGYLQDH 338
T + + H PP+ + PS L LL+ KC ++++N+KQ H+ I+KTG
Sbjct: 9 TLSPSILHFPPSSDPPYKLLQNQPS----LALLS-KC-TNMQNIKQVHSQIIKTGLHNTQ 62
Query: 339 YVAGSLIKCYANPHFGNLSNLLQVLEQVSEPNVFVWNNIIKG 464
+ LI+ A FG+LS L V E + EPN +WNNII+G
Sbjct: 63 FALSKLIEICAVSPFGDLSYALLVFETIREPNQVIWNNIIRG 104
>ref|XP_006450982.1| hypothetical protein CICLE_v10010823mg [Citrus clementina]
gi|557554208|gb|ESR64222.1| hypothetical protein
CICLE_v10010823mg [Citrus clementina]
Length = 736
Score = 63.9 bits (154), Expect = 2e-08
Identities = 38/102 (37%), Positives = 56/102 (54%)
Frame = +3
Query: 159 TTTELLYHPPPAEHSTENFTTSNPSQKTILHLLNTKCISSLENLKQAHALILKTGYLQDH 338
T + + H PP+ + PS L LL+ KC ++++N+KQ H+ I+KTG
Sbjct: 9 TLSPSILHFPPSSDPPYKLLQNQPS----LALLS-KC-TNMQNIKQVHSQIIKTGLHNTQ 62
Query: 339 YVAGSLIKCYANPHFGNLSNLLQVLEQVSEPNVFVWNNIIKG 464
+ LI+ A FG+LS L V E + EPN +WNNII+G
Sbjct: 63 FALSKLIEICAVSPFGDLSYALLVFETIREPNQVIWNNIIRG 104
>emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 63.2 bits (152), Expect = 3e-08
Identities = 38/103 (36%), Positives = 62/103 (60%)
Frame = +3
Query: 186 PPAEHSTENFTTSNPSQKTILHLLNTKCISSLENLKQAHALILKTGYLQDHYVAGSLIKC 365
P ++ S+E SN +Q LHLL +C S++E L+Q H +LKTG + D A L+
Sbjct: 8 PTSQLSSE----SNAAQT--LHLLQ-RC-SNMEELRQIHGQMLKTGLILDEIPASKLLAF 59
Query: 366 YANPHFGNLSNLLQVLEQVSEPNVFVWNNIIKGCLDLREPFDA 494
A+P+ G+L+ V +++ PN F+WN +I+G + +EP +A
Sbjct: 60 CASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEA 102
>ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 63.2 bits (152), Expect = 3e-08
Identities = 38/103 (36%), Positives = 62/103 (60%)
Frame = +3
Query: 186 PPAEHSTENFTTSNPSQKTILHLLNTKCISSLENLKQAHALILKTGYLQDHYVAGSLIKC 365
P ++ S+E SN +Q LHLL +C S++E L+Q H +LKTG + D A L+
Sbjct: 8 PTSQLSSE----SNAAQT--LHLLQ-RC-SNMEELRQIHGQMLKTGLILDEIPASKLLAF 59
Query: 366 YANPHFGNLSNLLQVLEQVSEPNVFVWNNIIKGCLDLREPFDA 494
A+P+ G+L+ V +++ PN F+WN +I+G + +EP +A
Sbjct: 60 CASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEA 102
>emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 63.2 bits (152), Expect = 3e-08
Identities = 38/103 (36%), Positives = 62/103 (60%)
Frame = +3
Query: 186 PPAEHSTENFTTSNPSQKTILHLLNTKCISSLENLKQAHALILKTGYLQDHYVAGSLIKC 365
P ++ S+E SN +Q LHLL +C S++E L+Q H +LKTG + D A L+
Sbjct: 8 PTSQLSSE----SNAAQT--LHLLQ-RC-SNMEELRQIHGQMLKTGLILDEIPASKLLAF 59
Query: 366 YANPHFGNLSNLLQVLEQVSEPNVFVWNNIIKGCLDLREPFDA 494
A+P+ G+L+ V +++ PN F+WN +I+G + +EP +A
Sbjct: 60 CASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEA 102
>gb|EMJ05156.1| hypothetical protein PRUPE_ppa022872mg [Prunus persica]
Length = 714
Score = 61.6 bits (148), Expect = 1e-07
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Frame = +3
Query: 219 TSNPSQKTI-----LHLLNTKCISSLENLKQAHALILKTGYLQDHYVAGSLIKCYANPHF 383
TS+P K + L LL+ KC S++NLKQ HA I+KTG H+ L++ A F
Sbjct: 23 TSDPPYKLLQTQPSLTLLS-KC-KSMQNLKQVHAHIIKTGLHNTHFALSKLVEFCAISPF 80
Query: 384 GNLSNLLQVLEQVSEPNVFVWNNIIKG 464
G+LS L V + + PN +WN II+G
Sbjct: 81 GDLSYALLVFQSIENPNQIIWNTIIRG 107