BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00011401
         (492 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus ...   172   3e-41
gb|EMJ23285.1| hypothetical protein PRUPE_ppa007576m1g, partial ...   172   4e-41
ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase-like ...   172   4e-41
ref|XP_006389535.1| hypothetical protein POPTR_0022s00690g [Popu...   171   7e-41
ref|XP_002331109.1| predicted protein [Populus trichocarpa]           171   7e-41
ref|XP_006598748.1| PREDICTED: uncharacterized protein LOC100799...   171   1e-40
ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycin...   171   1e-40
ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vi...   167   1e-39
ref|XP_006349329.1| PREDICTED: tRNA pseudouridine synthase-like ...   162   6e-38
gb|EOX97061.1| Pseudouridine synthase family protein isoform 3 [...   162   6e-38
gb|EOX97059.1| Pseudouridine synthase family protein isoform 1 [...   162   6e-38
ref|XP_004230453.1| PREDICTED: tRNA pseudouridine synthase A-lik...   161   7e-38
gb|ESW20555.1| hypothetical protein PHAVU_006G218900g [Phaseolus...   159   4e-37
gb|ESW20554.1| hypothetical protein PHAVU_006G218900g [Phaseolus...   159   4e-37
ref|XP_004161929.1| PREDICTED: tRNA pseudouridine synthase A-lik...   158   6e-37
ref|XP_004135354.1| PREDICTED: tRNA pseudouridine synthase A-lik...   158   6e-37
ref|XP_004309887.1| PREDICTED: tRNA pseudouridine synthase A-lik...   155   7e-36
ref|XP_003592926.1| tRNA pseudouridine synthase A [Medicago trun...   153   3e-35
gb|ABE79574.2| tRNA pseudouridine synthase [Medicago truncatula]      153   3e-35
ref|NP_172451.2| pseudouridine synthase family protein [Arabidop...   151   8e-35

>ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus communis]
           gi|223534233|gb|EEF35948.1| pseudouridylate synthase,
           putative [Ricinus communis]
          Length = 372

 Score =  172 bits (437), Expect = 3e-41
 Identities = 100/157 (63%), Positives = 114/157 (72%)
 Frame = +2

Query: 2   AKSPIRTLEELTVTEVASSPYFPSLLEREQSNYATLGSFSNSNKSETDCPPCVTGPSNQL 181
           AKSPIRTL E++V+EVAS+ YFPS+ EREQ+     G  S   K +TD P      +N +
Sbjct: 230 AKSPIRTLAEISVSEVASTLYFPSITEREQN--CENGENSCCKKFKTDLPMGSHSNTN-V 286

Query: 182 IENSGGEVIQGFGIRKRHRCFVVTARARSFLYHQVRLLVGVLKSVGTGDLTVSDGTTM*K 361
            E+S GE   GFGIR+RHRCFVVTARARSFLYHQVRLLVGVLKSVG GDLT SD      
Sbjct: 287 AESSFGETDLGFGIRRRHRCFVVTARARSFLYHQVRLLVGVLKSVGIGDLTTSD------ 340

Query: 362 ICSVCGVERILEAKNVSAASPMAPASGLYLGHVKYDI 472
                 VERIL AK+V+AASPMAPA GLYLGHVKYD+
Sbjct: 341 ------VERILSAKSVTAASPMAPARGLYLGHVKYDL 371


>gb|EMJ23285.1| hypothetical protein PRUPE_ppa007576m1g, partial [Prunus persica]
          Length = 234

 Score =  172 bits (436), Expect = 4e-41
 Identities = 95/157 (60%), Positives = 112/157 (71%)
 Frame = +2

Query: 2   AKSPIRTLEELTVTEVASSPYFPSLLEREQSNYATLGSFSNSNKSETDCPPCVTGPSNQL 181
           AKSPIRTL+EL V+EV S+P FPS++ER+Q+N       + +NKSETD PP   G ++  
Sbjct: 101 AKSPIRTLDELNVSEVVSTPCFPSIMERKQNNLGE-DPHAGTNKSETDPPPSFNGGADL- 158

Query: 182 IENSGGEVIQGFGIRKRHRCFVVTARARSFLYHQVRLLVGVLKSVGTGDLTVSDGTTM*K 361
                     GFG+RK+HRCFVVTARAR+FLYHQVRLLVGVLK+VGTGDL V D      
Sbjct: 159 ----------GFGLRKKHRCFVVTARARAFLYHQVRLLVGVLKAVGTGDLKVPD------ 202

Query: 362 ICSVCGVERILEAKNVSAASPMAPASGLYLGHVKYDI 472
                 VERIL AK V+AASPMAPA GLYLGHVKYD+
Sbjct: 203 ------VERILNAKTVTAASPMAPACGLYLGHVKYDL 233


>ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Glycine max]
          Length = 369

 Score =  172 bits (436), Expect = 4e-41
 Identities = 96/157 (61%), Positives = 112/157 (71%)
 Frame = +2

Query: 2   AKSPIRTLEELTVTEVASSPYFPSLLEREQSNYATLGSFSNSNKSETDCPPCVTGPSNQL 181
           AKSPIRTL+EL+V EV  SPYFPSL++REQ N  +    S SN +ETD PP ++ PS   
Sbjct: 225 AKSPIRTLDELSVNEVIESPYFPSLMDREQHNKVSGDLRSCSNNTETDIPP-ISNPSIDK 283

Query: 182 IENSGGEVIQGFGIRKRHRCFVVTARARSFLYHQVRLLVGVLKSVGTGDLTVSDGTTM*K 361
           +  S  +   GFG R+RHRC VVTARARSFLYHQVRLLVGVLK+ GTG+LT+ D      
Sbjct: 284 VITSSQDA--GFGKRRRHRCLVVTARARSFLYHQVRLLVGVLKAAGTGNLTIPD------ 335

Query: 362 ICSVCGVERILEAKNVSAASPMAPASGLYLGHVKYDI 472
                 VERIL AK V+AASPMAPA GLYLG VKYD+
Sbjct: 336 ------VERILNAKTVTAASPMAPACGLYLGEVKYDL 366


>ref|XP_006389535.1| hypothetical protein POPTR_0022s00690g [Populus trichocarpa]
           gi|550312358|gb|ERP48449.1| hypothetical protein
           POPTR_0022s00690g [Populus trichocarpa]
          Length = 370

 Score =  171 bits (434), Expect = 7e-41
 Identities = 99/160 (61%), Positives = 117/160 (73%), Gaps = 4/160 (2%)
 Frame = +2

Query: 2   AKSPIRTLEELTVTEVASSPYFPSLLEREQSNYATLGSFSNSNKSETDCPPCVTGP-SNQ 178
           AKSP RTLEEL+V EV S+PYFPS+ EREQ++    G  S  NK +T  P   TG  SN 
Sbjct: 226 AKSPFRTLEELSVLEVVSTPYFPSITEREQNSSNGEGPHSFHNKCKTGLP---TGSISNG 282

Query: 179 LI---ENSGGEVIQGFGIRKRHRCFVVTARARSFLYHQVRLLVGVLKSVGTGDLTVSDGT 349
            +    NSG ++  GFGIR+RHRC+V+TAR+RSFLYHQVRLLVGVLKSVGTGDLTVSD  
Sbjct: 283 FMAGGSNSGTDL--GFGIRRRHRCYVITARSRSFLYHQVRLLVGVLKSVGTGDLTVSD-- 338

Query: 350 TM*KICSVCGVERILEAKNVSAASPMAPASGLYLGHVKYD 469
                     VERIL A++++AASPMAPA GLYLGHVKY+
Sbjct: 339 ----------VERILNARSITAASPMAPACGLYLGHVKYE 368


>ref|XP_002331109.1| predicted protein [Populus trichocarpa]
          Length = 326

 Score =  171 bits (434), Expect = 7e-41
 Identities = 99/160 (61%), Positives = 117/160 (73%), Gaps = 4/160 (2%)
 Frame = +2

Query: 2   AKSPIRTLEELTVTEVASSPYFPSLLEREQSNYATLGSFSNSNKSETDCPPCVTGP-SNQ 178
           AKSP RTLEEL+V EV S+PYFPS+ EREQ++    G  S  NK +T  P   TG  SN 
Sbjct: 182 AKSPFRTLEELSVLEVVSTPYFPSITEREQNSSNGEGPHSFHNKCKTGLP---TGSISNG 238

Query: 179 LI---ENSGGEVIQGFGIRKRHRCFVVTARARSFLYHQVRLLVGVLKSVGTGDLTVSDGT 349
            +    NSG ++  GFGIR+RHRC+V+TAR+RSFLYHQVRLLVGVLKSVGTGDLTVSD  
Sbjct: 239 FMAGGSNSGTDL--GFGIRRRHRCYVITARSRSFLYHQVRLLVGVLKSVGTGDLTVSD-- 294

Query: 350 TM*KICSVCGVERILEAKNVSAASPMAPASGLYLGHVKYD 469
                     VERIL A++++AASPMAPA GLYLGHVKY+
Sbjct: 295 ----------VERILNARSITAASPMAPACGLYLGHVKYE 324


>ref|XP_006598748.1| PREDICTED: uncharacterized protein LOC100799818 isoform X1 [Glycine
           max]
          Length = 349

 Score =  171 bits (432), Expect = 1e-40
 Identities = 96/157 (61%), Positives = 112/157 (71%)
 Frame = +2

Query: 2   AKSPIRTLEELTVTEVASSPYFPSLLEREQSNYATLGSFSNSNKSETDCPPCVTGPSNQL 181
           AKSPIRTL+EL+V EV  SPYFPSL++REQ N  +    S  N SETD PP  + PS   
Sbjct: 205 AKSPIRTLDELSVNEVIESPYFPSLMDREQHNKVSGDLRSCPNNSETDIPP-TSNPSIDK 263

Query: 182 IENSGGEVIQGFGIRKRHRCFVVTARARSFLYHQVRLLVGVLKSVGTGDLTVSDGTTM*K 361
           +  S  +V  GFG R+RHRC VVTARAR+FLYHQVRLLVGVLK+VGTG+LT+ D      
Sbjct: 264 VMASSQDV--GFGKRRRHRCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTIPD------ 315

Query: 362 ICSVCGVERILEAKNVSAASPMAPASGLYLGHVKYDI 472
                 VERIL A+ V+AASPMAPA GLYLG VKYD+
Sbjct: 316 ------VERILNARTVTAASPMAPACGLYLGEVKYDL 346


>ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycine max]
           gi|255637177|gb|ACU18919.1| unknown [Glycine max]
          Length = 370

 Score =  171 bits (432), Expect = 1e-40
 Identities = 96/157 (61%), Positives = 112/157 (71%)
 Frame = +2

Query: 2   AKSPIRTLEELTVTEVASSPYFPSLLEREQSNYATLGSFSNSNKSETDCPPCVTGPSNQL 181
           AKSPIRTL+EL+V EV  SPYFPSL++REQ N  +    S  N SETD PP  + PS   
Sbjct: 226 AKSPIRTLDELSVNEVIESPYFPSLMDREQHNKVSGDLRSCPNNSETDIPP-TSNPSIDK 284

Query: 182 IENSGGEVIQGFGIRKRHRCFVVTARARSFLYHQVRLLVGVLKSVGTGDLTVSDGTTM*K 361
           +  S  +V  GFG R+RHRC VVTARAR+FLYHQVRLLVGVLK+VGTG+LT+ D      
Sbjct: 285 VMASSQDV--GFGKRRRHRCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTIPD------ 336

Query: 362 ICSVCGVERILEAKNVSAASPMAPASGLYLGHVKYDI 472
                 VERIL A+ V+AASPMAPA GLYLG VKYD+
Sbjct: 337 ------VERILNARTVTAASPMAPACGLYLGEVKYDL 367


>ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vitis vinifera]
           gi|297739525|emb|CBI29707.3| unnamed protein product
           [Vitis vinifera]
          Length = 380

 Score =  167 bits (423), Expect = 1e-39
 Identities = 92/157 (58%), Positives = 107/157 (68%)
 Frame = +2

Query: 2   AKSPIRTLEELTVTEVASSPYFPSLLEREQSNYATLGSFSNSNKSETDCPPCVTGPSNQL 181
           AKSPIRTL+EL V+EV  +PYFPS+ ER Q+N+      + SN +E    P         
Sbjct: 238 AKSPIRTLDELCVSEVLPTPYFPSITERAQNNFTEENPLACSNNAEVPDSPSTANHDRLD 297

Query: 182 IENSGGEVIQGFGIRKRHRCFVVTARARSFLYHQVRLLVGVLKSVGTGDLTVSDGTTM*K 361
             N  G   QGFG+R+RHRCF+VTARARSFLYHQVRLLVGV+K VGTGDLTVSD      
Sbjct: 298 GFNGAG---QGFGVRRRHRCFLVTARARSFLYHQVRLLVGVIKCVGTGDLTVSD------ 348

Query: 362 ICSVCGVERILEAKNVSAASPMAPASGLYLGHVKYDI 472
                 VERIL AK V+AASPMAPA GLYLG+V YD+
Sbjct: 349 ------VERILNAKTVTAASPMAPACGLYLGNVNYDL 379


>ref|XP_006349329.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Solanum
           tuberosum]
          Length = 389

 Score =  162 bits (409), Expect = 6e-38
 Identities = 90/159 (56%), Positives = 111/159 (69%)
 Frame = +2

Query: 2   AKSPIRTLEELTVTEVASSPYFPSLLEREQSNYATLGSFSNSNKSETDCPPCVTGPSNQL 181
           A SPIRTL+EL V EV S+P+FPS+ ER +S+ + +   + S  S+T+        + + 
Sbjct: 239 ANSPIRTLDELNVIEVVSTPFFPSISERLKSS-SVMEDPTVSLGSDTNHSQISLNTNEEK 297

Query: 182 IENSGGEVIQGFGIRKRHRCFVVTARARSFLYHQVRLLVGVLKSVGTGDLTVSDGTTM*K 361
           +E S GE  Q FG+R+RHRCFVVTARARSFLYHQVRLLVGVLKSVG G LT  D      
Sbjct: 298 LEGSNGEACQEFGLRRRHRCFVVTARARSFLYHQVRLLVGVLKSVGAGVLTDPD------ 351

Query: 362 ICSVCGVERILEAKNVSAASPMAPASGLYLGHVKYDISP 478
                 V+RILEAK+++AA PMAPA GLYLGHVKYD+ P
Sbjct: 352 ------VKRILEAKSITAAPPMAPACGLYLGHVKYDLPP 384


>gb|EOX97061.1| Pseudouridine synthase family protein isoform 3 [Theobroma cacao]
          Length = 373

 Score =  162 bits (409), Expect = 6e-38
 Identities = 92/157 (58%), Positives = 109/157 (69%)
 Frame = +2

Query: 2   AKSPIRTLEELTVTEVASSPYFPSLLEREQSNYATLGSFSNSNKSETDCPPCVTGPSNQL 181
           AKSPIRTL+EL V+E   +PYFPS+ E++Q+N +T  S + S + E D P      S+  
Sbjct: 226 AKSPIRTLDELHVSEAPPTPYFPSISEKKQNNSSTEDSHACSREPEIDLPIDSFSNSDDE 285

Query: 182 IENSGGEVIQGFGIRKRHRCFVVTARARSFLYHQVRLLVGVLKSVGTGDLTVSDGTTM*K 361
           +  S G    GFGIR+RH C+VVTARARSFLYHQVRLLVGVLK VGTG+LT SD      
Sbjct: 286 V-GSNGITDLGFGIRRRHHCYVVTARARSFLYHQVRLLVGVLKCVGTGELTTSD------ 338

Query: 362 ICSVCGVERILEAKNVSAASPMAPASGLYLGHVKYDI 472
                 VERIL AK V+AASPMAPA GLYLG VKYD+
Sbjct: 339 ------VERILNAKTVTAASPMAPAYGLYLGCVKYDL 369


>gb|EOX97059.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
          Length = 374

 Score =  162 bits (409), Expect = 6e-38
 Identities = 92/157 (58%), Positives = 109/157 (69%)
 Frame = +2

Query: 2   AKSPIRTLEELTVTEVASSPYFPSLLEREQSNYATLGSFSNSNKSETDCPPCVTGPSNQL 181
           AKSPIRTL+EL V+E   +PYFPS+ E++Q+N +T  S + S + E D P      S+  
Sbjct: 227 AKSPIRTLDELHVSEAPPTPYFPSISEKKQNNSSTEDSHACSREPEIDLPIDSFSNSDDE 286

Query: 182 IENSGGEVIQGFGIRKRHRCFVVTARARSFLYHQVRLLVGVLKSVGTGDLTVSDGTTM*K 361
           +  S G    GFGIR+RH C+VVTARARSFLYHQVRLLVGVLK VGTG+LT SD      
Sbjct: 287 V-GSNGITDLGFGIRRRHHCYVVTARARSFLYHQVRLLVGVLKCVGTGELTTSD------ 339

Query: 362 ICSVCGVERILEAKNVSAASPMAPASGLYLGHVKYDI 472
                 VERIL AK V+AASPMAPA GLYLG VKYD+
Sbjct: 340 ------VERILNAKTVTAASPMAPAYGLYLGCVKYDL 370


>ref|XP_004230453.1| PREDICTED: tRNA pseudouridine synthase A-like [Solanum
           lycopersicum]
          Length = 389

 Score =  161 bits (408), Expect = 7e-38
 Identities = 92/163 (56%), Positives = 111/163 (68%), Gaps = 4/163 (2%)
 Frame = +2

Query: 2   AKSPIRTLEELTVTEVASSPYFPSLLEREQSNYA----TLGSFSNSNKSETDCPPCVTGP 169
           A SPIRTL+EL V EV S+P+FPS+ ER +S+      T+   S++N S+          
Sbjct: 239 ANSPIRTLDELNVIEVVSTPFFPSISERLKSSSVMEDPTVYLGSDTNHSQISF-----NT 293

Query: 170 SNQLIENSGGEVIQGFGIRKRHRCFVVTARARSFLYHQVRLLVGVLKSVGTGDLTVSDGT 349
           +   +E S GE  Q FG+R+RHRCFVVTARARSFLYHQVRLLVGVLKSVG GDLT  D  
Sbjct: 294 NEGKLEGSNGEACQEFGLRRRHRCFVVTARARSFLYHQVRLLVGVLKSVGAGDLTDPD-- 351

Query: 350 TM*KICSVCGVERILEAKNVSAASPMAPASGLYLGHVKYDISP 478
                     V+RILEAK+++AA PMAPA GLYLGHVKYD+ P
Sbjct: 352 ----------VKRILEAKSIAAAPPMAPACGLYLGHVKYDLPP 384


>gb|ESW20555.1| hypothetical protein PHAVU_006G218900g [Phaseolus vulgaris]
          Length = 373

 Score =  159 bits (402), Expect = 4e-37
 Identities = 90/157 (57%), Positives = 110/157 (70%)
 Frame = +2

Query: 2   AKSPIRTLEELTVTEVASSPYFPSLLEREQSNYATLGSFSNSNKSETDCPPCVTGPSNQL 181
           AKSPIRTL+EL V+EV  S +FPS+++RE  +  +    S  + SETD PP  + P    
Sbjct: 229 AKSPIRTLDELNVSEVIESLHFPSVMDREGHDKVSSDPRSYPSNSETDIPPS-SSPCIDK 287

Query: 182 IENSGGEVIQGFGIRKRHRCFVVTARARSFLYHQVRLLVGVLKSVGTGDLTVSDGTTM*K 361
           +  S  +V  GFG R+RHRC VVTARARSFLYHQVRLLVGVLK+VGTG+LT+ D      
Sbjct: 288 VTTSSEDV--GFGKRRRHRCLVVTARARSFLYHQVRLLVGVLKAVGTGNLTIPD------ 339

Query: 362 ICSVCGVERILEAKNVSAASPMAPASGLYLGHVKYDI 472
                 VERIL AK+V++ASPMAPA GLYLG VKYD+
Sbjct: 340 ------VERILNAKSVTSASPMAPACGLYLGEVKYDL 370


>gb|ESW20554.1| hypothetical protein PHAVU_006G218900g [Phaseolus vulgaris]
          Length = 372

 Score =  159 bits (402), Expect = 4e-37
 Identities = 90/157 (57%), Positives = 110/157 (70%)
 Frame = +2

Query: 2   AKSPIRTLEELTVTEVASSPYFPSLLEREQSNYATLGSFSNSNKSETDCPPCVTGPSNQL 181
           AKSPIRTL+EL V+EV  S +FPS+++RE  +  +    S  + SETD PP  + P    
Sbjct: 228 AKSPIRTLDELNVSEVIESLHFPSVMDREGHDKVSSDPRSYPSNSETDIPPS-SSPCIDK 286

Query: 182 IENSGGEVIQGFGIRKRHRCFVVTARARSFLYHQVRLLVGVLKSVGTGDLTVSDGTTM*K 361
           +  S  +V  GFG R+RHRC VVTARARSFLYHQVRLLVGVLK+VGTG+LT+ D      
Sbjct: 287 VTTSSEDV--GFGKRRRHRCLVVTARARSFLYHQVRLLVGVLKAVGTGNLTIPD------ 338

Query: 362 ICSVCGVERILEAKNVSAASPMAPASGLYLGHVKYDI 472
                 VERIL AK+V++ASPMAPA GLYLG VKYD+
Sbjct: 339 ------VERILNAKSVTSASPMAPACGLYLGEVKYDL 369


>ref|XP_004161929.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 352

 Score =  158 bits (400), Expect = 6e-37
 Identities = 91/159 (57%), Positives = 107/159 (67%)
 Frame = +2

Query: 2   AKSPIRTLEELTVTEVASSPYFPSLLEREQSNYATLGSFSNSNKSETDCPPCVTGPSNQL 181
           A SPIRTL+EL V EVAS+PYFP+ +ER+Q             K E++    +  P ++ 
Sbjct: 224 ANSPIRTLDELNVCEVASTPYFPTSMERKQ----------RQGKEESE----IEVPCSET 269

Query: 182 IENSGGEVIQGFGIRKRHRCFVVTARARSFLYHQVRLLVGVLKSVGTGDLTVSDGTTM*K 361
            E        GFGIR+RHRCFVVTARARSFLYHQVRL+VGVLK+VG+GDLTV D      
Sbjct: 270 CE-------VGFGIRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGSGDLTVGD------ 316

Query: 362 ICSVCGVERILEAKNVSAASPMAPASGLYLGHVKYDISP 478
                 V RILEAKNVS+A PMAPA GLYLGHVKYD+ P
Sbjct: 317 ------VGRILEAKNVSSARPMAPACGLYLGHVKYDLPP 349


>ref|XP_004135354.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 350

 Score =  158 bits (400), Expect = 6e-37
 Identities = 91/159 (57%), Positives = 107/159 (67%)
 Frame = +2

Query: 2   AKSPIRTLEELTVTEVASSPYFPSLLEREQSNYATLGSFSNSNKSETDCPPCVTGPSNQL 181
           A SPIRTL+EL V EVAS+PYFP+ +ER+Q             K E++    +  P ++ 
Sbjct: 222 ANSPIRTLDELNVCEVASTPYFPTSMERKQ----------RQGKEESE----IEVPCSET 267

Query: 182 IENSGGEVIQGFGIRKRHRCFVVTARARSFLYHQVRLLVGVLKSVGTGDLTVSDGTTM*K 361
            E        GFGIR+RHRCFVVTARARSFLYHQVRL+VGVLK+VG+GDLTV D      
Sbjct: 268 CE-------VGFGIRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGSGDLTVGD------ 314

Query: 362 ICSVCGVERILEAKNVSAASPMAPASGLYLGHVKYDISP 478
                 V RILEAKNVS+A PMAPA GLYLGHVKYD+ P
Sbjct: 315 ------VGRILEAKNVSSARPMAPACGLYLGHVKYDLPP 347


>ref|XP_004309887.1| PREDICTED: tRNA pseudouridine synthase A-like [Fragaria vesca
           subsp. vesca]
          Length = 350

 Score =  155 bits (391), Expect = 7e-36
 Identities = 87/157 (55%), Positives = 103/157 (65%)
 Frame = +2

Query: 2   AKSPIRTLEELTVTEVASSPYFPSLLEREQSNYATLGSFSNSNKSETDCPPCVTGPSNQL 181
           AKSPIRTL+EL V+EV SSP FP++ ER ++          +N  E DC     G ++Q 
Sbjct: 218 AKSPIRTLDELNVSEVVSSPNFPTIAERTRN--LVQKDIQCTNNPEADCHSSFNGGTDQ- 274

Query: 182 IENSGGEVIQGFGIRKRHRCFVVTARARSFLYHQVRLLVGVLKSVGTGDLTVSDGTTM*K 361
                     GFG+RK+HRC VVTARAR+FLYHQVRLLVGVLK VGTGDL + D      
Sbjct: 275 ----------GFGLRKKHRCIVVTARARAFLYHQVRLLVGVLKCVGTGDLKIPD------ 318

Query: 362 ICSVCGVERILEAKNVSAASPMAPASGLYLGHVKYDI 472
                 VERIL AK V+AASPMAPA GLYLGHV+YD+
Sbjct: 319 ------VERILNAKTVTAASPMAPACGLYLGHVRYDL 349


>ref|XP_003592926.1| tRNA pseudouridine synthase A [Medicago truncatula]
           gi|355481974|gb|AES63177.1| tRNA pseudouridine synthase
           A [Medicago truncatula]
          Length = 375

 Score =  153 bits (386), Expect = 3e-35
 Identities = 88/157 (56%), Positives = 105/157 (66%)
 Frame = +2

Query: 2   AKSPIRTLEELTVTEVASSPYFPSLLEREQSNYATLGSFSNSNKSETDCPPCVTGPSNQL 181
           AKSPIR+L+EL+V EV  SPYFPS+++RE     T       + SET  P    G S ++
Sbjct: 232 AKSPIRSLDELSVVEVTRSPYFPSVMDRENPINVTDDLHCFHSNSETVIP---LGSSARI 288

Query: 182 IENSGGEVIQGFGIRKRHRCFVVTARARSFLYHQVRLLVGVLKSVGTGDLTVSDGTTM*K 361
            E S  +   GFG R+ HRC VVTARAR+FLYHQVRLLVGVLK VGTG++TV+D      
Sbjct: 289 DEVSASKEDVGFGKRRYHRCLVVTARARAFLYHQVRLLVGVLKDVGTGNITVTD------ 342

Query: 362 ICSVCGVERILEAKNVSAASPMAPASGLYLGHVKYDI 472
                 VERIL AK V+A SPMAPA GLYLG VKYD+
Sbjct: 343 ------VERILNAKTVTATSPMAPACGLYLGEVKYDL 373


>gb|ABE79574.2| tRNA pseudouridine synthase [Medicago truncatula]
          Length = 361

 Score =  153 bits (386), Expect = 3e-35
 Identities = 88/157 (56%), Positives = 105/157 (66%)
 Frame = +2

Query: 2   AKSPIRTLEELTVTEVASSPYFPSLLEREQSNYATLGSFSNSNKSETDCPPCVTGPSNQL 181
           AKSPIR+L+EL+V EV  SPYFPS+++RE     T       + SET  P    G S ++
Sbjct: 218 AKSPIRSLDELSVVEVTRSPYFPSVMDRENPINVTDDLHCFHSNSETVIP---LGSSARI 274

Query: 182 IENSGGEVIQGFGIRKRHRCFVVTARARSFLYHQVRLLVGVLKSVGTGDLTVSDGTTM*K 361
            E S  +   GFG R+ HRC VVTARAR+FLYHQVRLLVGVLK VGTG++TV+D      
Sbjct: 275 DEVSASKEDVGFGKRRYHRCLVVTARARAFLYHQVRLLVGVLKDVGTGNITVTD------ 328

Query: 362 ICSVCGVERILEAKNVSAASPMAPASGLYLGHVKYDI 472
                 VERIL AK V+A SPMAPA GLYLG VKYD+
Sbjct: 329 ------VERILNAKTVTATSPMAPACGLYLGEVKYDL 359


>ref|NP_172451.2| pseudouridine synthase family protein [Arabidopsis thaliana]
           gi|332190374|gb|AEE28495.1| pseudouridine synthase
           family protein [Arabidopsis thaliana]
          Length = 372

 Score =  151 bits (382), Expect = 8e-35
 Identities = 84/156 (53%), Positives = 104/156 (66%)
 Frame = +2

Query: 2   AKSPIRTLEELTVTEVASSPYFPSLLEREQSNYATLGSFSNSNKSETDCPPCVTGPSNQL 181
           AKSP+R+L+EL +TEV S+PYFPS+ ER  SN       + SN+ +++      G +  +
Sbjct: 231 AKSPMRSLDELNITEVPSTPYFPSITERTLSNLNNGDPLACSNQPKSE----TAGVTTNV 286

Query: 182 IENSGGEVIQGFGIRKRHRCFVVTARARSFLYHQVRLLVGVLKSVGTGDLTVSDGTTM*K 361
            E  G      FG R+RHRC+VVTAR+R FLYHQVRL+VG LK VGTG+LTVSD      
Sbjct: 287 GEVEGSTEGDSFGRRRRHRCYVVTARSRGFLYHQVRLIVGALKCVGTGELTVSD------ 340

Query: 362 ICSVCGVERILEAKNVSAASPMAPASGLYLGHVKYD 469
                 VERILEAK VSAA PMAPASGLYL  V+Y+
Sbjct: 341 ------VERILEAKTVSAAKPMAPASGLYLARVRYE 370