BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00011305
         (1207 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY32739.1| Cyclin-like family protein [Theobroma cacao]           500   e-139
ref|XP_002513521.1| transcription initiation factor iib, putativ...   489   e-135
ref|XP_002277679.1| PREDICTED: transcription initiation factor I...   478   e-132
ref|XP_004304334.1| PREDICTED: transcription initiation factor I...   468   e-129
ref|XP_002534470.1| transcription initiation factor iib, putativ...   467   e-129
ref|XP_002284342.1| PREDICTED: transcription initiation factor I...   467   e-129
ref|XP_002269045.1| PREDICTED: transcription initiation factor I...   466   e-129
ref|XP_006660890.1| PREDICTED: transcription initiation factor I...   465   e-128
gb|EMJ03476.1| hypothetical protein PRUPE_ppa008972mg [Prunus pe...   465   e-128
ref|NP_001063775.1| Os09g0534800 [Oryza sativa Japonica Group] g...   465   e-128
ref|XP_002460572.1| hypothetical protein SORBIDRAFT_02g031020 [S...   465   e-128
ref|XP_006421304.1| hypothetical protein CICLE_v10005479mg [Citr...   464   e-128
dbj|BAK05040.1| predicted protein [Hordeum vulgare subsp. vulgare]    464   e-128
ref|XP_004957467.1| PREDICTED: transcription initiation factor I...   464   e-128
ref|XP_004150610.1| PREDICTED: transcription initiation factor I...   464   e-128
gb|ESW34163.1| hypothetical protein PHAVU_001G130000g [Phaseolus...   463   e-128
gb|EOY09190.1| Cyclin-like family protein isoform 1 [Theobroma c...   463   e-128
gb|ABR16853.1| unknown [Picea sitchensis]                             463   e-128
ref|XP_002322722.1| Transcription initiation factor IIB-1 family...   463   e-128
ref|XP_003578512.1| PREDICTED: transcription initiation factor I...   462   e-128

>gb|EOY32739.1| Cyclin-like family protein [Theobroma cacao]
          Length = 312

 Score =  500 bits (1288), Expect = e-139
 Identities = 253/312 (81%), Positives = 265/312 (84%)
 Frame = -1

Query: 1135 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 956
            MAD +CP+CKRPTEVVFDHSAGD VC ECGLVLEAHSIDETSEWRTFANE+GDNDPVRVG
Sbjct: 1    MADSFCPDCKRPTEVVFDHSAGDIVCSECGLVLEAHSIDETSEWRTFANESGDNDPVRVG 60

Query: 955  GPTNPLLADGGLSTVISTPNXXXXXXXXXXXGRWQNRASNPDRSLIQAFKTIATMADRLG 776
            GP+NPLLADGGLSTVIS PN           GRWQNR +NPDRSLIQAFKTIATM+DRLG
Sbjct: 61   GPSNPLLADGGLSTVISKPNGSSGDFLTSSLGRWQNRGANPDRSLIQAFKTIATMSDRLG 120

Query: 775  LVATIKDRANEIYKKVEDQKPLRGRNQDAILAACLYIACRQEDKPRTMKEICSVANGATK 596
            LVATIKDRANEIYKKVEDQKPLRGRNQDAILAACLYIACRQEDKPRT+KEICSVANGATK
Sbjct: 121  LVATIKDRANEIYKKVEDQKPLRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 595  KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXKSEEL 416
            KEIGRAKE+IVKQLE+EMGQ+MEMGTIHAGDFLR FCSHLGM N           KSEEL
Sbjct: 181  KEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMSNQTVKAAQEAVQKSEEL 240

Query: 415  DXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIVPSWY 236
            D               ITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHP A K+VPSWY
Sbjct: 241  DIRRSPISIAAAVIYIITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPHASKLVPSWY 300

Query: 235  AKEEDLRQLCSP 200
            AKEEDL+ LCSP
Sbjct: 301  AKEEDLKNLCSP 312


>ref|XP_002513521.1| transcription initiation factor iib, putative [Ricinus communis]
            gi|223547429|gb|EEF48924.1| transcription initiation
            factor iib, putative [Ricinus communis]
          Length = 312

 Score =  489 bits (1258), Expect = e-135
 Identities = 246/312 (78%), Positives = 263/312 (84%)
 Frame = -1

Query: 1135 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 956
            MAD YCP+CKRPTEVVFDHSAGDTVC ECGLVLE+HSIDETSEWRTFANE+ DNDPVRVG
Sbjct: 1    MADTYCPDCKRPTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESADNDPVRVG 60

Query: 955  GPTNPLLADGGLSTVISTPNXXXXXXXXXXXGRWQNRASNPDRSLIQAFKTIATMADRLG 776
            GP+NPLLADGGLSTVIS P            GRWQNR SNPDRSLIQAFKTIATM+DRLG
Sbjct: 61   GPSNPLLADGGLSTVISKPTGASGDFLTSSLGRWQNRGSNPDRSLIQAFKTIATMSDRLG 120

Query: 775  LVATIKDRANEIYKKVEDQKPLRGRNQDAILAACLYIACRQEDKPRTMKEICSVANGATK 596
            LVATIKDRANEIYKKVEDQKPLRGRNQDA+LAACLYIACRQEDKPRT+KEICSVANGATK
Sbjct: 121  LVATIKDRANEIYKKVEDQKPLRGRNQDAVLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 595  KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXKSEEL 416
            KEIGRAKE+IVKQLE+E+GQ+MEMGTIHAGDFLR FCSHLGM N           KSEEL
Sbjct: 181  KEIGRAKEYIVKQLEVELGQSMEMGTIHAGDFLRRFCSHLGMNNQAVKAAQEAVKKSEEL 240

Query: 415  DXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIVPSWY 236
            D               ITQLS++KKLLKDIS +TGVAEGTIRNSYKDL+P+A +IVPSWY
Sbjct: 241  DIRRSPISIAAAIIYMITQLSEEKKLLKDISTSTGVAEGTIRNSYKDLYPYASRIVPSWY 300

Query: 235  AKEEDLRQLCSP 200
            AKEEDL  LCSP
Sbjct: 301  AKEEDLINLCSP 312


>ref|XP_002277679.1| PREDICTED: transcription initiation factor IIB [Vitis vinifera]
            gi|297734946|emb|CBI17180.3| unnamed protein product
            [Vitis vinifera]
          Length = 314

 Score =  478 bits (1229), Expect = e-132
 Identities = 245/314 (78%), Positives = 258/314 (82%), Gaps = 2/314 (0%)
 Frame = -1

Query: 1135 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 956
            M D YCPECKR TEVV DHSAGDTVC ECGLVLEAHSIDE SEWRTFANE+ DNDPVRVG
Sbjct: 1    MTDTYCPECKRYTEVVLDHSAGDTVCSECGLVLEAHSIDEASEWRTFANESADNDPVRVG 60

Query: 955  GPTNPLLADGGLSTVISTPNXXXXXXXXXXXG--RWQNRASNPDRSLIQAFKTIATMADR 782
            GP+NPLLADGGLST+IS P+              RWQNR SNPDRSLIQAFKTIATM DR
Sbjct: 61   GPSNPLLADGGLSTLISKPSNGGPSNDFLSSSLGRWQNRGSNPDRSLIQAFKTIATMCDR 120

Query: 781  LGLVATIKDRANEIYKKVEDQKPLRGRNQDAILAACLYIACRQEDKPRTMKEICSVANGA 602
            LGLVATIKD ANEIYKKVEDQKPLRGRNQDAILAAC+YIACRQEDKPRT+KEICSVANGA
Sbjct: 121  LGLVATIKDLANEIYKKVEDQKPLRGRNQDAILAACIYIACRQEDKPRTVKEICSVANGA 180

Query: 601  TKKEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXKSE 422
            TKKEIGRAKE+IVKQLE+EMGQ+MEMGTIHAGDFLR FCSHLGM N           KSE
Sbjct: 181  TKKEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNQAVKAAQEAVQKSE 240

Query: 421  ELDXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIVPS 242
            ELD               ITQLSDDKKLLKDISLATGVAEGTIRNSYKDL+P+A +I+PS
Sbjct: 241  ELDIRRSPISVAAAVIYMITQLSDDKKLLKDISLATGVAEGTIRNSYKDLYPYASRIIPS 300

Query: 241  WYAKEEDLRQLCSP 200
             YAKEEDLR LCSP
Sbjct: 301  SYAKEEDLRNLCSP 314


>ref|XP_004304334.1| PREDICTED: transcription initiation factor IIB-like [Fragaria vesca
            subsp. vesca]
          Length = 312

 Score =  468 bits (1204), Expect = e-129
 Identities = 237/312 (75%), Positives = 255/312 (81%)
 Frame = -1

Query: 1135 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 956
            M+D YC +CKR TEVVFDHSAGDTVC ECGLVLE+HSIDETSEWRTFANE+GDNDPVRVG
Sbjct: 1    MSDAYCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 955  GPTNPLLADGGLSTVISTPNXXXXXXXXXXXGRWQNRASNPDRSLIQAFKTIATMADRLG 776
            GPTNPLLADGGLSTVI+ PN           GRWQNR SNPDR LI AFKTIATM+DRLG
Sbjct: 61   GPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 775  LVATIKDRANEIYKKVEDQKPLRGRNQDAILAACLYIACRQEDKPRTMKEICSVANGATK 596
            LVATIKDRANEIYK+VEDQK  RGRNQDA+LAACLYIACRQEDKPRT+KEICSVANGATK
Sbjct: 121  LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 595  KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXKSEEL 416
            KEIGRAKE+IVKQL LE GQ++EMGTIHAGDF+R FCS+LGM N           KSEE 
Sbjct: 181  KEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240

Query: 415  DXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIVPSWY 236
            D               ITQLSDDKK LKDISLATGVAEGTIRNSYKDL+P   KI+P+WY
Sbjct: 241  DIRRSPISIAAAVIYIITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPHVSKIIPNWY 300

Query: 235  AKEEDLRQLCSP 200
            AKEEDL+ LCSP
Sbjct: 301  AKEEDLKNLCSP 312


>ref|XP_002534470.1| transcription initiation factor iib, putative [Ricinus communis]
            gi|223525233|gb|EEF27913.1| transcription initiation
            factor iib, putative [Ricinus communis]
          Length = 312

 Score =  467 bits (1202), Expect = e-129
 Identities = 237/312 (75%), Positives = 254/312 (81%)
 Frame = -1

Query: 1135 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 956
            M D YC +CKR TEVVFDHSAGDTVC ECGLVLE+HSIDETSEWRTFANE+GDNDPVRVG
Sbjct: 1    MGDAYCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 955  GPTNPLLADGGLSTVISTPNXXXXXXXXXXXGRWQNRASNPDRSLIQAFKTIATMADRLG 776
            GPTNPLLADGGLSTVI+ PN           GRWQNR SNPDR LI AFKTIATM+DRLG
Sbjct: 61   GPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 775  LVATIKDRANEIYKKVEDQKPLRGRNQDAILAACLYIACRQEDKPRTMKEICSVANGATK 596
            LVATIKDRANEIYKKVEDQK  RGRNQDA+LAACLYIACRQEDKPRT+KEICSVANGATK
Sbjct: 121  LVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 595  KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXKSEEL 416
            KEIGRAKE+IVKQL LE GQ++EMGTIHAGDF+R FCS+LGM N           KSEE 
Sbjct: 181  KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAMKAAQEAVQKSEEF 240

Query: 415  DXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIVPSWY 236
            D               I+QLSDDKKLL+DIS ATGVAEGTIRNSYKDL+P   KI+PSWY
Sbjct: 241  DIRRSPISIAAAVIYIISQLSDDKKLLRDISHATGVAEGTIRNSYKDLYPHVSKIIPSWY 300

Query: 235  AKEEDLRQLCSP 200
            AKEEDL+ LCSP
Sbjct: 301  AKEEDLKNLCSP 312


>ref|XP_002284342.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
            gi|297739630|emb|CBI29812.3| unnamed protein product
            [Vitis vinifera]
          Length = 312

 Score =  467 bits (1202), Expect = e-129
 Identities = 235/312 (75%), Positives = 255/312 (81%)
 Frame = -1

Query: 1135 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 956
            MAD +C +CK+ TEVVFDHSAGDTVC ECGLVLE+HSIDETSEWRTFANE+GDNDPVRVG
Sbjct: 1    MADAFCTDCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 955  GPTNPLLADGGLSTVISTPNXXXXXXXXXXXGRWQNRASNPDRSLIQAFKTIATMADRLG 776
            GP+NPLL DGGLSTVI+ PN           GRWQNR SNPDR LI AFKTIATM+DRLG
Sbjct: 61   GPSNPLLTDGGLSTVIAKPNGVSGDFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 775  LVATIKDRANEIYKKVEDQKPLRGRNQDAILAACLYIACRQEDKPRTMKEICSVANGATK 596
            LVATIKDRANEIYKKVEDQK  RGRNQDA+LAACLYIACRQEDKPRT+KEICSVANGATK
Sbjct: 121  LVATIKDRANEIYKKVEDQKSTRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 595  KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXKSEEL 416
            KEIGRAKE+IVKQLE E GQ++EMGTIHAGDF+R FCS+LGM N           KSEE 
Sbjct: 181  KEIGRAKEYIVKQLEAEKGQSVEMGTIHAGDFMRRFCSNLGMTNQVVKAAQEAVQKSEEF 240

Query: 415  DXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIVPSWY 236
            D               ITQLSD+KKLL+DIS+ATGVAEGTIRNSYKDL+P   KI+PSWY
Sbjct: 241  DIRRSPVSIAAAVIYIITQLSDEKKLLRDISIATGVAEGTIRNSYKDLYPHISKIIPSWY 300

Query: 235  AKEEDLRQLCSP 200
            AKEEDLR LCSP
Sbjct: 301  AKEEDLRNLCSP 312


>ref|XP_002269045.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
            gi|296088031|emb|CBI35314.3| unnamed protein product
            [Vitis vinifera]
          Length = 312

 Score =  466 bits (1199), Expect = e-129
 Identities = 234/312 (75%), Positives = 255/312 (81%)
 Frame = -1

Query: 1135 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 956
            MAD +C +CK+ TEVVFDHSAGDTVC ECGLVLE+HSIDETSEWRTFANE+GDNDPVRVG
Sbjct: 1    MADAFCTDCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 955  GPTNPLLADGGLSTVISTPNXXXXXXXXXXXGRWQNRASNPDRSLIQAFKTIATMADRLG 776
            GP+NPLL DGGLSTVI+ PN           GRWQNR SNPDR LI AFKTIATM+DRLG
Sbjct: 61   GPSNPLLTDGGLSTVIAKPNGVSGDFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 775  LVATIKDRANEIYKKVEDQKPLRGRNQDAILAACLYIACRQEDKPRTMKEICSVANGATK 596
            LVATIKDRANEIYKKVEDQK  RGRNQDA+LAACLYIACRQEDKPRT+KEICSVANGATK
Sbjct: 121  LVATIKDRANEIYKKVEDQKSTRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 595  KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXKSEEL 416
            KEIGRAKE+IVKQLE E GQ++EMGTIHAGDF+R FCS+LGM N           KSEE 
Sbjct: 181  KEIGRAKEYIVKQLEAEKGQSVEMGTIHAGDFMRRFCSNLGMTNQVVKAAQEAVQKSEEF 240

Query: 415  DXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIVPSWY 236
            D               ITQLSD+KKLL+DIS+ATGVAEGTIRNSYKDL+P   +I+PSWY
Sbjct: 241  DIRRSPVSIAAAVIYIITQLSDEKKLLRDISIATGVAEGTIRNSYKDLYPHISRIIPSWY 300

Query: 235  AKEEDLRQLCSP 200
            AKEEDLR LCSP
Sbjct: 301  AKEEDLRNLCSP 312


>ref|XP_006660890.1| PREDICTED: transcription initiation factor IIB-like [Oryza
            brachyantha]
          Length = 312

 Score =  465 bits (1197), Expect = e-128
 Identities = 234/312 (75%), Positives = 256/312 (82%)
 Frame = -1

Query: 1135 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 956
            M+D +CP+CK+ TEV FDHSAGDTVC ECGLVLEAHS+DETSEWRTFANE+ DNDPVRVG
Sbjct: 1    MSDSFCPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESNDNDPVRVG 60

Query: 955  GPTNPLLADGGLSTVISTPNXXXXXXXXXXXGRWQNRASNPDRSLIQAFKTIATMADRLG 776
            GPTNPLL DGGLSTVI+ PN           GRWQNR SNPDRSLI AF+TIA MADRLG
Sbjct: 61   GPTNPLLTDGGLSTVIAKPNGAQGEFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG 120

Query: 775  LVATIKDRANEIYKKVEDQKPLRGRNQDAILAACLYIACRQEDKPRTMKEICSVANGATK 596
            LVATIKDRANEIYKKVED K +RGRNQDAILAACLYIACRQED+PRT+KEICSVANGATK
Sbjct: 121  LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 180

Query: 595  KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXKSEEL 416
            KEIGRAKEFIVKQLE+EMGQ+MEMGTIHAGDFLR FCS LGM N           +SEEL
Sbjct: 181  KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNQAVKAAQEAVQRSEEL 240

Query: 415  DXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIVPSWY 236
            D               ITQLSDDKK LKDISLATGVAEGTIRNSYKDL+P+A +++P+ Y
Sbjct: 241  DIRRSPISIAAAVIYMITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPYASRLIPNTY 300

Query: 235  AKEEDLRQLCSP 200
            AKEEDL+ LC+P
Sbjct: 301  AKEEDLKNLCTP 312


>gb|EMJ03476.1| hypothetical protein PRUPE_ppa008972mg [Prunus persica]
          Length = 312

 Score =  465 bits (1197), Expect = e-128
 Identities = 235/312 (75%), Positives = 255/312 (81%)
 Frame = -1

Query: 1135 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 956
            M+D YC +CKR TEVVFDHSAGDTVC ECGLVLE+HSIDETSEWRTFANE+GDNDPVRVG
Sbjct: 1    MSDAYCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 955  GPTNPLLADGGLSTVISTPNXXXXXXXXXXXGRWQNRASNPDRSLIQAFKTIATMADRLG 776
            GPTNPLLADGGLSTVI+ PN           GRWQNR SNPDR LI AFKTIATM+DRLG
Sbjct: 61   GPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 775  LVATIKDRANEIYKKVEDQKPLRGRNQDAILAACLYIACRQEDKPRTMKEICSVANGATK 596
            LVATIKDRANEIYK+VEDQK  RGRNQDA+LAACLYIACRQEDKPRT+KEICSVANGA+K
Sbjct: 121  LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGASK 180

Query: 595  KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXKSEEL 416
            KEIGRAKE+IVKQL LE GQ++EMGTIHAGDF+R FCS+LGM N           KSEE 
Sbjct: 181  KEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240

Query: 415  DXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIVPSWY 236
            D               ITQLSDDKK LKDIS+ATGVAEGTIRNSYKDL+P   KI+P+WY
Sbjct: 241  DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPNWY 300

Query: 235  AKEEDLRQLCSP 200
            AKEEDL+ LCSP
Sbjct: 301  AKEEDLKNLCSP 312


>ref|NP_001063775.1| Os09g0534800 [Oryza sativa Japonica Group]
            gi|21362998|sp|Q8W0W3.1|TF2B_ORYSJ RecName:
            Full=Transcription initiation factor IIB; AltName:
            Full=General transcription factor TFIIB
            gi|18481632|gb|AAL73491.1|AF464908_1 general
            transcription factor TFIIB [Oryza sativa]
            gi|50725809|dbj|BAD33339.1| Transcription initiation
            factor IIB [Oryza sativa Japonica Group]
            gi|50726577|dbj|BAD34211.1| Transcription initiation
            factor IIB [Oryza sativa Japonica Group]
            gi|113632008|dbj|BAF25689.1| Os09g0534800 [Oryza sativa
            Japonica Group] gi|125564497|gb|EAZ09877.1| hypothetical
            protein OsI_32170 [Oryza sativa Indica Group]
            gi|125606444|gb|EAZ45480.1| hypothetical protein
            OsJ_30135 [Oryza sativa Japonica Group]
            gi|347737122|gb|AEP20532.1| transcription factor [Oryza
            sativa Japonica Group]
          Length = 312

 Score =  465 bits (1197), Expect = e-128
 Identities = 234/312 (75%), Positives = 256/312 (82%)
 Frame = -1

Query: 1135 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 956
            M+D +CP+CK+ TEV FDHSAGDTVC ECGLVLEAHS+DETSEWRTFANE+ DNDPVRVG
Sbjct: 1    MSDSFCPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESSDNDPVRVG 60

Query: 955  GPTNPLLADGGLSTVISTPNXXXXXXXXXXXGRWQNRASNPDRSLIQAFKTIATMADRLG 776
            GPTNPLL DGGLSTVI+ PN           GRWQNR SNPDRSLI AF+TIA MADRLG
Sbjct: 61   GPTNPLLTDGGLSTVIAKPNGAQGEFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG 120

Query: 775  LVATIKDRANEIYKKVEDQKPLRGRNQDAILAACLYIACRQEDKPRTMKEICSVANGATK 596
            LVATIKDRANEIYKKVED K +RGRNQDAILAACLYIACRQED+PRT+KEICSVANGATK
Sbjct: 121  LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 180

Query: 595  KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXKSEEL 416
            KEIGRAKEFIVKQLE+EMGQ+MEMGTIHAGDFLR FCS LGM N           +SEEL
Sbjct: 181  KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNQAVKAAQEAVQRSEEL 240

Query: 415  DXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIVPSWY 236
            D               ITQLSDDKK LKDISLATGVAEGTIRNSYKDL+P+A +++P+ Y
Sbjct: 241  DIRRSPISIAAAVIYMITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPYASRLIPNTY 300

Query: 235  AKEEDLRQLCSP 200
            AKEEDL+ LC+P
Sbjct: 301  AKEEDLKNLCTP 312


>ref|XP_002460572.1| hypothetical protein SORBIDRAFT_02g031020 [Sorghum bicolor]
            gi|241923949|gb|EER97093.1| hypothetical protein
            SORBIDRAFT_02g031020 [Sorghum bicolor]
          Length = 312

 Score =  465 bits (1196), Expect = e-128
 Identities = 233/312 (74%), Positives = 256/312 (82%)
 Frame = -1

Query: 1135 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 956
            M+D +CP+CK+ TEV FDHSAGDTVC ECGLVLEAHS+DETSEWRTFANE+ DNDPVRVG
Sbjct: 1    MSDSFCPDCKKQTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESNDNDPVRVG 60

Query: 955  GPTNPLLADGGLSTVISTPNXXXXXXXXXXXGRWQNRASNPDRSLIQAFKTIATMADRLG 776
            GPTNPLL DGGLSTVI+ PN           GRWQNR SNPDRSLI AF+TIA MADRLG
Sbjct: 61   GPTNPLLTDGGLSTVIAKPNGAQGEFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG 120

Query: 775  LVATIKDRANEIYKKVEDQKPLRGRNQDAILAACLYIACRQEDKPRTMKEICSVANGATK 596
            LVATIKDRANEIYKKVED K +RGRNQDAILAACLYIACRQED+PRT+KEICSVANGATK
Sbjct: 121  LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 180

Query: 595  KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXKSEEL 416
            KEIGRAKEFIVKQLE+EMGQ+MEMGTIHAGDFLR FCS LGM N           +SEEL
Sbjct: 181  KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNQAVKAAQEAVQRSEEL 240

Query: 415  DXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIVPSWY 236
            D               ITQLS+DKK LKDISLATGVAEGTIRNSYKDL+P+A +++P+ Y
Sbjct: 241  DIRRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDLYPYAARLIPNTY 300

Query: 235  AKEEDLRQLCSP 200
            AKEEDL+ LC+P
Sbjct: 301  AKEEDLKNLCTP 312


>ref|XP_006421304.1| hypothetical protein CICLE_v10005479mg [Citrus clementina]
            gi|568880032|ref|XP_006492943.1| PREDICTED: transcription
            initiation factor IIB-2-like [Citrus sinensis]
            gi|557523177|gb|ESR34544.1| hypothetical protein
            CICLE_v10005479mg [Citrus clementina]
          Length = 312

 Score =  464 bits (1195), Expect = e-128
 Identities = 235/312 (75%), Positives = 254/312 (81%)
 Frame = -1

Query: 1135 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 956
            M D +C +CK+ TEVVFDHSAGDTVC ECGLVLE+HSIDETSEWRTFANE+GDNDPVRVG
Sbjct: 1    MTDAFCSDCKKHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 955  GPTNPLLADGGLSTVISTPNXXXXXXXXXXXGRWQNRASNPDRSLIQAFKTIATMADRLG 776
            GPTNPLLADGGLSTVI+ PN           GRWQNR SNPDR LI AFKTIATM+DRLG
Sbjct: 61   GPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 775  LVATIKDRANEIYKKVEDQKPLRGRNQDAILAACLYIACRQEDKPRTMKEICSVANGATK 596
            LVATIKDRANEIYKKVEDQK  RGRNQDA+LAACLYIACRQEDKPRT+KEICSVANGATK
Sbjct: 121  LVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 595  KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXKSEEL 416
            KEIGRAKE+IVKQL LE GQ++EMGTIHAGDF+R FCS+LGM N           KSEE 
Sbjct: 181  KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240

Query: 415  DXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIVPSWY 236
            D               ITQLSDDKK LKDIS+ATGVAEGTIRNSYKDL+P   KI+P+WY
Sbjct: 241  DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPNWY 300

Query: 235  AKEEDLRQLCSP 200
            AKEEDL+ LCSP
Sbjct: 301  AKEEDLKNLCSP 312


>dbj|BAK05040.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 312

 Score =  464 bits (1195), Expect = e-128
 Identities = 233/312 (74%), Positives = 256/312 (82%)
 Frame = -1

Query: 1135 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 956
            M+D YCP+CK+ TEV FDHSAGDTVC ECGLVLEAHS+DETSEWRTFANE+ DNDPVRVG
Sbjct: 1    MSDTYCPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESNDNDPVRVG 60

Query: 955  GPTNPLLADGGLSTVISTPNXXXXXXXXXXXGRWQNRASNPDRSLIQAFKTIATMADRLG 776
            GP+NPLL DGGLSTVI+ PN           GRWQNR SNPDRSLI AF+TIA MADRLG
Sbjct: 61   GPSNPLLTDGGLSTVIAKPNGAHGDFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG 120

Query: 775  LVATIKDRANEIYKKVEDQKPLRGRNQDAILAACLYIACRQEDKPRTMKEICSVANGATK 596
            LVATIKDRANEIYKKVED K +RGRNQDAILAACLYIACRQED+PRT+KEICSVANGATK
Sbjct: 121  LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 180

Query: 595  KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXKSEEL 416
            KEIGRAKEFIVKQLE+EMGQ+MEMGTIHAGDFLR FCS LGM N           +SEEL
Sbjct: 181  KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNTAVKAAQEAVQRSEEL 240

Query: 415  DXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIVPSWY 236
            D               ITQLS+DKK LKDISLATGVAEGTIRNSYKDL+P+A +++P+ Y
Sbjct: 241  DIRRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDLYPYAARLIPNSY 300

Query: 235  AKEEDLRQLCSP 200
            AKEEDL+ LC+P
Sbjct: 301  AKEEDLKNLCTP 312


>ref|XP_004957467.1| PREDICTED: transcription initiation factor IIB-like [Setaria italica]
          Length = 312

 Score =  464 bits (1194), Expect = e-128
 Identities = 233/312 (74%), Positives = 256/312 (82%)
 Frame = -1

Query: 1135 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 956
            M+D +CP+CK+ TEV FDHSAGDTVC ECGLVLEAHS+DETSEWRTFANE+ DNDPVRVG
Sbjct: 1    MSDSFCPDCKKQTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESNDNDPVRVG 60

Query: 955  GPTNPLLADGGLSTVISTPNXXXXXXXXXXXGRWQNRASNPDRSLIQAFKTIATMADRLG 776
            GPTNPLL DGGLSTVI+ PN           GRWQNR SNPDRSLI AF+TIA MADRLG
Sbjct: 61   GPTNPLLTDGGLSTVIAKPNGAQGEFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG 120

Query: 775  LVATIKDRANEIYKKVEDQKPLRGRNQDAILAACLYIACRQEDKPRTMKEICSVANGATK 596
            LVATIKDRANEIYKKVED K +RGRNQDAILAACLYIACRQED+PRT+KEICSVANGATK
Sbjct: 121  LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 180

Query: 595  KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXKSEEL 416
            KEIGRAKEFIVKQLE+EMGQ+MEMGTIHAGDFLR FCS LGM N           +SEEL
Sbjct: 181  KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNQAVKAAQEAVQRSEEL 240

Query: 415  DXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIVPSWY 236
            D               ITQLS+DKK LKDISLATGVAEGTIRNSYKDL+P+A +++P+ Y
Sbjct: 241  DIRRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDLYPYASRLIPNTY 300

Query: 235  AKEEDLRQLCSP 200
            AKEEDL+ LC+P
Sbjct: 301  AKEEDLKNLCTP 312


>ref|XP_004150610.1| PREDICTED: transcription initiation factor IIB-2-like [Cucumis
            sativus] gi|449529834|ref|XP_004171903.1| PREDICTED:
            transcription initiation factor IIB-2-like [Cucumis
            sativus]
          Length = 312

 Score =  464 bits (1194), Expect = e-128
 Identities = 235/312 (75%), Positives = 254/312 (81%)
 Frame = -1

Query: 1135 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 956
            M+D +C +CKR TEVVFDHSAGDTVC ECGLVLE+HSIDETSEWRTFANE+GDNDPVRVG
Sbjct: 1    MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 955  GPTNPLLADGGLSTVISTPNXXXXXXXXXXXGRWQNRASNPDRSLIQAFKTIATMADRLG 776
            GPTNPLLADGGLSTVI+ PN           GRWQNR SNPDR LI AFKTIATM+DRLG
Sbjct: 61   GPTNPLLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 775  LVATIKDRANEIYKKVEDQKPLRGRNQDAILAACLYIACRQEDKPRTMKEICSVANGATK 596
            LVATIKDRANEIYK+VEDQK  RGRNQDA+LAACLYIACRQEDKPRT+KEICSVANGATK
Sbjct: 121  LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 595  KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXKSEEL 416
            KEIGRAKE+IVKQL LE GQ++EMGTIHAGDF+R FCS+LGM N           KSEE 
Sbjct: 181  KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240

Query: 415  DXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIVPSWY 236
            D               ITQLSDDKK LKDIS+ATGVAEGTIRNSYKDL+P   KI+P WY
Sbjct: 241  DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKILPGWY 300

Query: 235  AKEEDLRQLCSP 200
            AKEEDL+ LCSP
Sbjct: 301  AKEEDLKNLCSP 312


>gb|ESW34163.1| hypothetical protein PHAVU_001G130000g [Phaseolus vulgaris]
          Length = 312

 Score =  463 bits (1192), Expect = e-128
 Identities = 232/312 (74%), Positives = 254/312 (81%)
 Frame = -1

Query: 1135 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 956
            M+D++C +CKR TEVV DHSAGDTVC ECGLVLE+HSIDETSEWRTFANE+GDNDPVRVG
Sbjct: 1    MSDVFCSDCKRQTEVVVDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 955  GPTNPLLADGGLSTVISTPNXXXXXXXXXXXGRWQNRASNPDRSLIQAFKTIATMADRLG 776
            GPTNPLL DGGLSTVI+ PN           GRWQNR SNPDR LI AFK+IATM+DRLG
Sbjct: 61   GPTNPLLTDGGLSTVIAKPNGASGEFLTSSLGRWQNRGSNPDRGLIVAFKSIATMSDRLG 120

Query: 775  LVATIKDRANEIYKKVEDQKPLRGRNQDAILAACLYIACRQEDKPRTMKEICSVANGATK 596
            LVATIKDRANEIYK+VEDQK  RGRNQDA+LAACLYIACRQEDKPRT+KEICSVANGATK
Sbjct: 121  LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 595  KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXKSEEL 416
            KEIGRAKE++VKQL LE GQ++EMGTIHAGDF+R FCS+LGM N           KSEE 
Sbjct: 181  KEIGRAKEYVVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240

Query: 415  DXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIVPSWY 236
            D               ITQLSDDKK LKDIS+ATGVAEGTIRNSYKDLHP+  KI+P+WY
Sbjct: 241  DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLHPYVFKIIPNWY 300

Query: 235  AKEEDLRQLCSP 200
            AKEEDL  LCSP
Sbjct: 301  AKEEDLNNLCSP 312


>gb|EOY09190.1| Cyclin-like family protein isoform 1 [Theobroma cacao]
          Length = 312

 Score =  463 bits (1192), Expect = e-128
 Identities = 235/312 (75%), Positives = 254/312 (81%)
 Frame = -1

Query: 1135 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 956
            MAD +C +CKR TEVVFDHSAGDTVC ECGLVLE+HSIDETSEWRTFANE+GDNDPVRVG
Sbjct: 1    MADAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 955  GPTNPLLADGGLSTVISTPNXXXXXXXXXXXGRWQNRASNPDRSLIQAFKTIATMADRLG 776
            GPTNPLLADGGLSTVI+ PN           GRWQNR SNPDR LI AFKTIATM+DRLG
Sbjct: 61   GPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 775  LVATIKDRANEIYKKVEDQKPLRGRNQDAILAACLYIACRQEDKPRTMKEICSVANGATK 596
            LVATIKDRANEIYKKVEDQK  RGRNQDA+LAACLYIACRQEDKPRT+KEICSVANGATK
Sbjct: 121  LVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 595  KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXKSEEL 416
            KEIGRAKE+IVKQL LE GQ++EMGTIHAGDF+R FCS+LGM N           KSEE 
Sbjct: 181  KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240

Query: 415  DXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIVPSWY 236
            D               ITQLSDDKK L+DIS+ATGVAEGTIRNSYKDL+P   KI+P+WY
Sbjct: 241  DIRRSPISIAAAVIYIITQLSDDKKPLRDISVATGVAEGTIRNSYKDLYPHVSKIIPNWY 300

Query: 235  AKEEDLRQLCSP 200
            AK EDL+ LCSP
Sbjct: 301  AKGEDLKNLCSP 312


>gb|ABR16853.1| unknown [Picea sitchensis]
          Length = 313

 Score =  463 bits (1192), Expect = e-128
 Identities = 231/307 (75%), Positives = 254/307 (82%)
 Frame = -1

Query: 1120 CPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVGGPTNP 941
            CP+CK+ TEVVFDHSAGDTVC+ECGLVLEAHSIDETSEWRTFANETGDNDPVRVGGP+NP
Sbjct: 7    CPDCKKQTEVVFDHSAGDTVCVECGLVLEAHSIDETSEWRTFANETGDNDPVRVGGPSNP 66

Query: 940  LLADGGLSTVISTPNXXXXXXXXXXXGRWQNRASNPDRSLIQAFKTIATMADRLGLVATI 761
            LL DGGLSTVIS PN           GRWQNR SNPDRSLI AFKTI TM+DRLGLVATI
Sbjct: 67   LLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLIMAFKTIGTMSDRLGLVATI 126

Query: 760  KDRANEIYKKVEDQKPLRGRNQDAILAACLYIACRQEDKPRTMKEICSVANGATKKEIGR 581
            KDRANEIYKKVED K +RGRNQDAILAACLYIACRQEDKPRT+KEICSVANGA+KKE+GR
Sbjct: 127  KDRANEIYKKVEDSKSIRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGASKKEVGR 186

Query: 580  AKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXKSEELDXXXX 401
            AKEFIVKQLE EMG++MEMGTIHAGDFLR FCSHLGM +           KSEELD    
Sbjct: 187  AKEFIVKQLEEEMGKSMEMGTIHAGDFLRRFCSHLGMGHQAVKAATEAVKKSEELDIRRS 246

Query: 400  XXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIVPSWYAKEED 221
                       I+QLS++KKLL+DIS ATGVAEGTIRNSYKDL+P A +++P W+AKEED
Sbjct: 247  PISIAAAAIYMISQLSEEKKLLRDISRATGVAEGTIRNSYKDLYPHAARLIPDWFAKEED 306

Query: 220  LRQLCSP 200
            L+ LC+P
Sbjct: 307  LKNLCAP 313


>ref|XP_002322722.1| Transcription initiation factor IIB-1 family protein [Populus
            trichocarpa] gi|222867352|gb|EEF04483.1| Transcription
            initiation factor IIB-1 family protein [Populus
            trichocarpa]
          Length = 312

 Score =  463 bits (1191), Expect = e-128
 Identities = 233/312 (74%), Positives = 251/312 (80%)
 Frame = -1

Query: 1135 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 956
            M D +C +CKR TEVVFDHSAGDTVC ECGLVLE+HSIDETSEWRTFANE+GDNDPVRVG
Sbjct: 1    MGDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 955  GPTNPLLADGGLSTVISTPNXXXXXXXXXXXGRWQNRASNPDRSLIQAFKTIATMADRLG 776
            GPTNPLL DGGLSTVI+ PN           GRWQNR SNPDR LI AFKTIATM+DRLG
Sbjct: 61   GPTNPLLTDGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLITAFKTIATMSDRLG 120

Query: 775  LVATIKDRANEIYKKVEDQKPLRGRNQDAILAACLYIACRQEDKPRTMKEICSVANGATK 596
            LVATIKDRANEIYKKVEDQK  RGRNQDA+LAACLYIACRQEDKPRT+KEICSVANGATK
Sbjct: 121  LVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 595  KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXKSEEL 416
            KEIGRAKE+IVKQL LE GQ++EMGTIHAGDF+R FCS+LGM N            SE+ 
Sbjct: 181  KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMSNHTVKAATEAVKTSEQF 240

Query: 415  DXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIVPSWY 236
            D               ITQLSDDKK L+DISLATGVAEGTIRNSYKDL+P   KI+PSWY
Sbjct: 241  DIRRSPISIAAAVIYIITQLSDDKKPLRDISLATGVAEGTIRNSYKDLYPHVSKIIPSWY 300

Query: 235  AKEEDLRQLCSP 200
            A EEDL+ LCSP
Sbjct: 301  ASEEDLKNLCSP 312


>ref|XP_003578512.1| PREDICTED: transcription initiation factor IIB-like [Brachypodium
            distachyon]
          Length = 312

 Score =  462 bits (1190), Expect = e-128
 Identities = 232/312 (74%), Positives = 256/312 (82%)
 Frame = -1

Query: 1135 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 956
            M+D +CP+CK+ TEV FDHSAGDTVC ECGLVLEAHS+DETSEWRTFANE+ DNDPVRVG
Sbjct: 1    MSDTFCPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESNDNDPVRVG 60

Query: 955  GPTNPLLADGGLSTVISTPNXXXXXXXXXXXGRWQNRASNPDRSLIQAFKTIATMADRLG 776
            GP+NPLL DGGLSTVI+ PN           GRWQNR SNPDRSLI AF+TIA MADRLG
Sbjct: 61   GPSNPLLTDGGLSTVIAKPNGAHGEFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG 120

Query: 775  LVATIKDRANEIYKKVEDQKPLRGRNQDAILAACLYIACRQEDKPRTMKEICSVANGATK 596
            LVATIKDRANEIYKKVED K +RGRNQDAILAACLYIACRQED+PRT+KEICSVANGATK
Sbjct: 121  LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 180

Query: 595  KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXKSEEL 416
            KEIGRAKEFIVKQLE+EMGQ+MEMGTIHAGDFLR FCS LGM N           +SEEL
Sbjct: 181  KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNTAVKAAQEAVQRSEEL 240

Query: 415  DXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIVPSWY 236
            D               ITQLS+DKK LKDISLATGVAEGTIRNSYKDL+P+A +++P+ Y
Sbjct: 241  DIRRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDLYPYASRLIPNTY 300

Query: 235  AKEEDLRQLCSP 200
            AKEEDL+ LC+P
Sbjct: 301  AKEEDLKNLCTP 312