BLASTX nr result
ID: Rehmannia25_contig00011178
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00011178
(1159 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004245638.1| PREDICTED: replication factor C subunit 2-li... 584 e-164
ref|XP_006358877.1| PREDICTED: replication factor C subunit 2-li... 583 e-164
gb|EMJ01585.1| hypothetical protein PRUPE_ppa008426mg [Prunus pe... 572 e-160
ref|XP_002304476.1| replication factor C 40 kDa family protein [... 571 e-160
ref|XP_006391776.1| hypothetical protein EUTSA_v10023584mg [Eutr... 569 e-160
ref|XP_004298747.1| PREDICTED: replication factor C subunit 2-li... 569 e-160
ref|XP_002509739.1| replication factor C / DNA polymerase III ga... 568 e-159
gb|EXC34102.1| Replication factor C subunit 2 [Morus notabilis] 568 e-159
gb|EOY24642.1| Replication factor C 2 isoform 1 [Theobroma cacao... 568 e-159
ref|XP_004515806.1| PREDICTED: replication factor C subunit 2-li... 566 e-159
ref|XP_004147970.1| PREDICTED: replication factor C subunit 2-li... 565 e-159
ref|XP_006302449.1| hypothetical protein CARUB_v10020535mg, part... 564 e-158
gb|AFK40126.1| unknown [Medicago truncatula] 563 e-158
gb|EOY24643.1| Replication factor C / DNA polymerase III gamma-t... 562 e-157
ref|XP_002886430.1| hypothetical protein ARALYDRAFT_475032 [Arab... 561 e-157
ref|XP_002283246.1| PREDICTED: replication factor C subunit 2 [V... 561 e-157
gb|ESW27549.1| hypothetical protein PHAVU_003G211700g [Phaseolus... 558 e-156
ref|NP_176504.1| replication factor C 2 [Arabidopsis thaliana] g... 558 e-156
dbj|BAB69675.1| replication factor C 40kDa subunit [Oryza sativa... 558 e-156
ref|XP_006857848.1| hypothetical protein AMTR_s00069p00063160 [A... 558 e-156
>ref|XP_004245638.1| PREDICTED: replication factor C subunit 2-like [Solanum lycopersicum]
Length = 331
Score = 584 bits (1506), Expect = e-164
Identities = 294/321 (91%), Positives = 303/321 (94%)
Frame = -3
Query: 1067 AGPEIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAH 888
+GPEIPWVEK+RPTKV+DIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAH
Sbjct: 9 SGPEIPWVEKFRPTKVSDIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAH 68
Query: 887 ELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQ 708
ELLGPNY+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQ
Sbjct: 69 ELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQ 128
Query: 707 QALRRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQV 528
QALRRTMEIYSNSTRF LACNTSSKIIEPIQSRCALVRFARLSDQEILGRLM VVAAE+V
Sbjct: 129 QALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMAVVAAEKV 188
Query: 527 PYVPEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVI 348
YVPEGLEAIIFTADGDMRQ LNNLQAT+SGFGFVNQENVFKVCDQPHPLHVKNMVR V+
Sbjct: 189 AYVPEGLEAIIFTADGDMRQGLNNLQATHSGFGFVNQENVFKVCDQPHPLHVKNMVRNVL 248
Query: 347 EGKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGV 168
EGKFDDACAGLK LYDLGYSPTDIITTLFRIIKNYDM EY+KLEF+KETGFAHMRICDGV
Sbjct: 249 EGKFDDACAGLKALYDLGYSPTDIITTLFRIIKNYDMAEYVKLEFLKETGFAHMRICDGV 308
Query: 167 GSYXXXXXXXXXXXLVRETAK 105
GSY LVRETAK
Sbjct: 309 GSYLQMCGLLAKLSLVRETAK 329
>ref|XP_006358877.1| PREDICTED: replication factor C subunit 2-like [Solanum tuberosum]
Length = 331
Score = 583 bits (1503), Expect = e-164
Identities = 293/321 (91%), Positives = 303/321 (94%)
Frame = -3
Query: 1067 AGPEIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAH 888
+GPEIPWVEK+RPTKV+DIVGNEDAV+RLQVIARDGNMPNLILAGPPGTGKTTSILALAH
Sbjct: 9 SGPEIPWVEKFRPTKVSDIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAH 68
Query: 887 ELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQ 708
ELLGPNY+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQ
Sbjct: 69 ELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQ 128
Query: 707 QALRRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQV 528
QALRRTMEIYSNSTRF LACNTSSKIIEPIQSRCALVRFARLSDQEILGRLM VVAAE+V
Sbjct: 129 QALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMAVVAAEKV 188
Query: 527 PYVPEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVI 348
YVPEGLEAIIFTADGDMRQ LNNLQAT+SGFGFVNQENVFKVCDQPHPLHVKNMVR V+
Sbjct: 189 AYVPEGLEAIIFTADGDMRQGLNNLQATHSGFGFVNQENVFKVCDQPHPLHVKNMVRNVL 248
Query: 347 EGKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGV 168
EGKFDDACAGLK LYDLGYSPTDIITTLFRIIKNYDM EY+KLEF+KETGFAHMRICDGV
Sbjct: 249 EGKFDDACAGLKALYDLGYSPTDIITTLFRIIKNYDMAEYVKLEFLKETGFAHMRICDGV 308
Query: 167 GSYXXXXXXXXXXXLVRETAK 105
GSY LVRETAK
Sbjct: 309 GSYLQMCGLLAKLSLVRETAK 329
>gb|EMJ01585.1| hypothetical protein PRUPE_ppa008426mg [Prunus persica]
Length = 332
Score = 572 bits (1473), Expect = e-160
Identities = 285/318 (89%), Positives = 298/318 (93%)
Frame = -3
Query: 1058 EIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELL 879
+IPWVEKYRP+ VADIVGNEDAV+RLQVIARDGNMPNLILAGPPGTGKTTSILALAHELL
Sbjct: 13 DIPWVEKYRPSNVADIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHELL 72
Query: 878 GPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQAL 699
GPNY+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEADSMTSGAQQAL
Sbjct: 73 GPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQAL 132
Query: 698 RRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYV 519
RRTMEIYSNSTRF LACN SSKIIEPIQSRCALVRF+RLSDQEILGRLM+VV AE+VPYV
Sbjct: 133 RRTMEIYSNSTRFALACNVSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVVQAEKVPYV 192
Query: 518 PEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGK 339
PEGLEAIIFTADGDMRQALNNLQATNSGF FVNQENVFKVCDQPHPLHVKNMV V+EGK
Sbjct: 193 PEGLEAIIFTADGDMRQALNNLQATNSGFRFVNQENVFKVCDQPHPLHVKNMVCNVLEGK 252
Query: 338 FDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSY 159
FDDAC+GLK+LYDLGYSPTDIITT FRIIKNYDM EYLKLEFMKETGFAHMRICDGVGSY
Sbjct: 253 FDDACSGLKQLYDLGYSPTDIITTFFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSY 312
Query: 158 XXXXXXXXXXXLVRETAK 105
L+RETAK
Sbjct: 313 LQLCGLLAKLSLIRETAK 330
>ref|XP_002304476.1| replication factor C 40 kDa family protein [Populus trichocarpa]
gi|222841908|gb|EEE79455.1| replication factor C 40 kDa
family protein [Populus trichocarpa]
Length = 330
Score = 571 bits (1472), Expect = e-160
Identities = 285/318 (89%), Positives = 300/318 (94%)
Frame = -3
Query: 1058 EIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELL 879
+IPWVEKYRP KVADIVGN+DAV+RLQVIARDGNMPNLILAGPPGTGKTTSILALAHELL
Sbjct: 11 DIPWVEKYRPNKVADIVGNQDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHELL 70
Query: 878 GPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQAL 699
GPN +EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPG+HKI+ILDEADSMTSGAQQAL
Sbjct: 71 GPNSKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIVILDEADSMTSGAQQAL 130
Query: 698 RRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYV 519
RRTMEIYSNSTRF LACNTSSKIIEPIQSRCA+VRF+RLSDQEILGRLMVVV AEQVPYV
Sbjct: 131 RRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVGAEQVPYV 190
Query: 518 PEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGK 339
PEGLEAIIFTADGDMRQALNNLQAT+SGF FVNQENVFKVCDQPHPLHVKNMVRQV+EGK
Sbjct: 191 PEGLEAIIFTADGDMRQALNNLQATHSGFHFVNQENVFKVCDQPHPLHVKNMVRQVLEGK 250
Query: 338 FDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSY 159
FDDAC+GLK LYD+GYSPTDIITTLFRIIKNYDM EY+KLEFMKETGFAHMRICDGVGSY
Sbjct: 251 FDDACSGLKHLYDMGYSPTDIITTLFRIIKNYDMAEYMKLEFMKETGFAHMRICDGVGSY 310
Query: 158 XXXXXXXXXXXLVRETAK 105
LVR+TA+
Sbjct: 311 LQLCGLLAKLALVRDTAR 328
>ref|XP_006391776.1| hypothetical protein EUTSA_v10023584mg [Eutrema salsugineum]
gi|557088282|gb|ESQ29062.1| hypothetical protein
EUTSA_v10023584mg [Eutrema salsugineum]
Length = 333
Score = 569 bits (1466), Expect = e-160
Identities = 284/320 (88%), Positives = 298/320 (93%)
Frame = -3
Query: 1064 GPEIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHE 885
G EIPWVEKYRP+KV DIVGNEDAV+RLQVIARDGNMPNLILAGPPGTGKTTSILALAHE
Sbjct: 12 GYEIPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHE 71
Query: 884 LLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQ 705
LLGPNY+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEADSMTSGAQQ
Sbjct: 72 LLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQ 131
Query: 704 ALRRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVP 525
ALRRT+EIYSNSTRF LACNTS+KIIEPIQSRCALVRF+RLSDQEILGRLMVVV AE VP
Sbjct: 132 ALRRTIEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDQEILGRLMVVVQAENVP 191
Query: 524 YVPEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIE 345
++PEGLEAIIFTADGDMRQALNNLQAT SGF FVNQENVFKVCDQPHPLHVKNMVR V+E
Sbjct: 192 FIPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQPHPLHVKNMVRNVLE 251
Query: 344 GKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVG 165
KFDDAC G+K+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVG
Sbjct: 252 SKFDDACHGMKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 311
Query: 164 SYXXXXXXXXXXXLVRETAK 105
SY +VRETAK
Sbjct: 312 SYLQLCGLLAKLAVVRETAK 331
>ref|XP_004298747.1| PREDICTED: replication factor C subunit 2-like [Fragaria vesca subsp.
vesca]
Length = 329
Score = 569 bits (1466), Expect = e-160
Identities = 282/318 (88%), Positives = 298/318 (93%)
Frame = -3
Query: 1058 EIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELL 879
++PWVEKYRPTKV+DIVGNEDAV+RLQVIARDGNMPNLILAGPPG GKTTSILALAHELL
Sbjct: 10 DMPWVEKYRPTKVSDIVGNEDAVSRLQVIARDGNMPNLILAGPPGIGKTTSILALAHELL 69
Query: 878 GPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQAL 699
GPNYRE VLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKI+ILDEADSMTSGAQQAL
Sbjct: 70 GPNYREGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSGAQQAL 129
Query: 698 RRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYV 519
RRTMEIYSNSTRF LACNTSSKIIEPIQSRCALVRF+RL+DQEILGRLM+VV AE+VPYV
Sbjct: 130 RRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLTDQEILGRLMIVVQAEKVPYV 189
Query: 518 PEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGK 339
PEGLEAIIFTADGDMRQALNNLQATNSGF FVNQENVFKVCDQPHPLHVKNMV ++EGK
Sbjct: 190 PEGLEAIIFTADGDMRQALNNLQATNSGFRFVNQENVFKVCDQPHPLHVKNMVHNILEGK 249
Query: 338 FDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSY 159
FDDAC+GLK+LYD+GYSPTDIITT FRIIKNYDM E+LKLEFMKETGFAHMRICDGVGSY
Sbjct: 250 FDDACSGLKQLYDMGYSPTDIITTFFRIIKNYDMAEFLKLEFMKETGFAHMRICDGVGSY 309
Query: 158 XXXXXXXXXXXLVRETAK 105
LVR+TAK
Sbjct: 310 LQLCGLLAKLSLVRDTAK 327
>ref|XP_002509739.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
[Ricinus communis] gi|223549638|gb|EEF51126.1|
replication factor C / DNA polymerase III gamma-tau
subunit, putative [Ricinus communis]
Length = 333
Score = 568 bits (1465), Expect = e-159
Identities = 281/318 (88%), Positives = 300/318 (94%)
Frame = -3
Query: 1058 EIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELL 879
++PWVEKYRP+K+ DIVGNEDAV+RLQVIARDGNMPNLIL+GPPGTGKTTSILALAHELL
Sbjct: 14 DVPWVEKYRPSKICDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELL 73
Query: 878 GPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQAL 699
GPNY+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEADSMTSGAQQAL
Sbjct: 74 GPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQAL 133
Query: 698 RRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYV 519
RRTMEIYSNSTRF LACNTSSKIIEPIQSRCALVRF+RLSDQEILGRL++VV AE+VPYV
Sbjct: 134 RRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLIIVVQAEKVPYV 193
Query: 518 PEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGK 339
PEGLEAIIFTADGDMRQALNNLQAT SGF FVNQENVFKVCDQPHPLHVKNMVR V+EGK
Sbjct: 194 PEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRHVMEGK 253
Query: 338 FDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSY 159
+DDAC+GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVGSY
Sbjct: 254 YDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSY 313
Query: 158 XXXXXXXXXXXLVRETAK 105
LVR+TA+
Sbjct: 314 LQLCGLLAKLALVRDTAR 331
>gb|EXC34102.1| Replication factor C subunit 2 [Morus notabilis]
Length = 330
Score = 568 bits (1464), Expect = e-159
Identities = 286/321 (89%), Positives = 298/321 (92%)
Frame = -3
Query: 1067 AGPEIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAH 888
+G +IPWVEKYRPT V DIVGNEDAV+RLQVIARDGNMPNLIL+GPPGTGKTTSILALAH
Sbjct: 8 SGYDIPWVEKYRPTNVIDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAH 67
Query: 887 ELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQ 708
ELLGPNYRE VLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKI+ILDEADSMTSGAQ
Sbjct: 68 ELLGPNYREGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSGAQ 127
Query: 707 QALRRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQV 528
QALRRTMEIYSNSTRF LACNTSSKIIEPIQSRCALVRF+RLSDQEIL RLMVVV AE+V
Sbjct: 128 QALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILVRLMVVVDAEKV 187
Query: 527 PYVPEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVI 348
PYVPEGLEAIIFTADGDMRQALNNLQAT SGF F+NQENVFKVCDQPHPLHVKNMVR V+
Sbjct: 188 PYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFLNQENVFKVCDQPHPLHVKNMVRHVL 247
Query: 347 EGKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGV 168
EGKFDDAC+GLK+LYDLGYSPTDIITT FRIIKNYDM EYLKL+FMKETGFAHMRICDGV
Sbjct: 248 EGKFDDACSGLKQLYDLGYSPTDIITTFFRIIKNYDMAEYLKLQFMKETGFAHMRICDGV 307
Query: 167 GSYXXXXXXXXXXXLVRETAK 105
GSY LVRETAK
Sbjct: 308 GSYLQLCGLLAKLSLVRETAK 328
>gb|EOY24642.1| Replication factor C 2 isoform 1 [Theobroma cacao]
gi|508777388|gb|EOY24644.1| Replication factor C 2
isoform 1 [Theobroma cacao]
Length = 332
Score = 568 bits (1464), Expect = e-159
Identities = 286/320 (89%), Positives = 298/320 (93%)
Frame = -3
Query: 1064 GPEIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHE 885
G ++PWVEKYRP KV+DIVGNEDAV+RLQVIA DGNMPNLIL+GPPGTGKTTSILALAHE
Sbjct: 11 GYDVPWVEKYRPNKVSDIVGNEDAVSRLQVIAHDGNMPNLILSGPPGTGKTTSILALAHE 70
Query: 884 LLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQ 705
LLG NY+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKI+ILDEADSMTSGAQQ
Sbjct: 71 LLGTNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSGAQQ 130
Query: 704 ALRRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVP 525
ALRRTMEIYSNSTRF LACNTSSKIIEPIQSRCALVRF+RLSDQEILGRLMVVV AE+VP
Sbjct: 131 ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMVVVDAEKVP 190
Query: 524 YVPEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIE 345
YVPEGLEAIIFTADGDMRQALNNLQAT SGF FVNQENVFKVCDQPHPLHVKNMVR V+E
Sbjct: 191 YVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQPHPLHVKNMVRYVLE 250
Query: 344 GKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVG 165
G+FDDAC GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVG
Sbjct: 251 GRFDDACLGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 310
Query: 164 SYXXXXXXXXXXXLVRETAK 105
SY LVRETAK
Sbjct: 311 SYLQLCGLLAKFSLVRETAK 330
>ref|XP_004515806.1| PREDICTED: replication factor C subunit 2-like [Cicer arietinum]
Length = 332
Score = 567 bits (1460), Expect = e-159
Identities = 284/318 (89%), Positives = 297/318 (93%)
Frame = -3
Query: 1058 EIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELL 879
++PWVEKYRP+KV DIVGNEDAV+RLQVIARDGNMPN+IL+GP GTGKTTSILALAHELL
Sbjct: 13 DVPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNIILSGPSGTGKTTSILALAHELL 72
Query: 878 GPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQAL 699
GPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKI+ILDEADSMTSGAQQAL
Sbjct: 73 GPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSGAQQAL 132
Query: 698 RRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYV 519
RRTMEIYSNSTRF LACNTSSKIIEPIQSRCA+VRF+RLSDQEILGRLMVVV AE+VPYV
Sbjct: 133 RRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVQAEKVPYV 192
Query: 518 PEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGK 339
PEGLEAIIFTADGDMRQALNNLQAT SGF FVNQ NVFKVCDQPHPLHVKNMVR VIEG
Sbjct: 193 PEGLEAIIFTADGDMRQALNNLQATYSGFQFVNQANVFKVCDQPHPLHVKNMVRNVIEGN 252
Query: 338 FDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSY 159
FD+AC+GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVGSY
Sbjct: 253 FDEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSY 312
Query: 158 XXXXXXXXXXXLVRETAK 105
LVRETAK
Sbjct: 313 LQMCGLLAKLSLVRETAK 330
>ref|XP_004147970.1| PREDICTED: replication factor C subunit 2-like [Cucumis sativus]
gi|449494241|ref|XP_004159490.1| PREDICTED: replication
factor C subunit 2-like [Cucumis sativus]
Length = 331
Score = 565 bits (1457), Expect = e-159
Identities = 278/318 (87%), Positives = 298/318 (93%)
Frame = -3
Query: 1058 EIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELL 879
+IPWVEKYRP KV DIVGNEDAV+RLQVIARDGNMPNLIL+GPPGTGKTTSILALAHELL
Sbjct: 12 DIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELL 71
Query: 878 GPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQAL 699
GPNY+E VLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEADSMT+GAQQAL
Sbjct: 72 GPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTTGAQQAL 131
Query: 698 RRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYV 519
RRTMEIYSN+TRF LACNTSSKIIEPIQSRCA+VRF+RL+DQEILGRLMVV+ AE+VPYV
Sbjct: 132 RRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMVVIQAEKVPYV 191
Query: 518 PEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGK 339
PEGLEAIIFTADGDMRQALNNLQAT+SGF FVNQ+NVFKVCDQPHPLHVKN+VR V+EGK
Sbjct: 192 PEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGK 251
Query: 338 FDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSY 159
FDDAC GL++LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVGSY
Sbjct: 252 FDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSY 311
Query: 158 XXXXXXXXXXXLVRETAK 105
+VRETAK
Sbjct: 312 LQLCGLLAKLSMVRETAK 329
>ref|XP_006302449.1| hypothetical protein CARUB_v10020535mg, partial [Capsella rubella]
gi|482571159|gb|EOA35347.1| hypothetical protein
CARUB_v10020535mg, partial [Capsella rubella]
Length = 360
Score = 564 bits (1453), Expect = e-158
Identities = 282/321 (87%), Positives = 297/321 (92%)
Frame = -3
Query: 1067 AGPEIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAH 888
+G E PWVEKYRP+KV DIVGNEDAV+RLQVIARDGNMPNLILAGPPGTGKTTSILALAH
Sbjct: 38 SGGEEPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAH 97
Query: 887 ELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQ 708
ELLG NY+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEADSMTSGAQ
Sbjct: 98 ELLGKNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQ 157
Query: 707 QALRRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQV 528
QALRRT+EIYSNSTRF LACNTS+KIIEPIQSRCALVRF+RLSD++ILGRLMVVV AE V
Sbjct: 158 QALRRTIEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDEQILGRLMVVVQAENV 217
Query: 527 PYVPEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVI 348
PYVPEGLEAIIFTADGDMRQALNNLQATNSGF VNQENVFKVCDQPHPLHVKN+VR V+
Sbjct: 218 PYVPEGLEAIIFTADGDMRQALNNLQATNSGFRLVNQENVFKVCDQPHPLHVKNIVRNVL 277
Query: 347 EGKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGV 168
E KFDDAC GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGV
Sbjct: 278 ESKFDDACHGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGV 337
Query: 167 GSYXXXXXXXXXXXLVRETAK 105
GSY +VRETAK
Sbjct: 338 GSYLQLCGLLAKLAIVRETAK 358
>gb|AFK40126.1| unknown [Medicago truncatula]
Length = 333
Score = 563 bits (1452), Expect = e-158
Identities = 282/320 (88%), Positives = 297/320 (92%)
Frame = -3
Query: 1067 AGPEIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAH 888
A ++PWVEKYRP+KV DIVGNEDAV+RLQVIARDGNMPNLIL+GPPGTGKTTSILALAH
Sbjct: 11 ASYDVPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAH 70
Query: 887 ELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQ 708
ELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEADSMTSGAQ
Sbjct: 71 ELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQ 130
Query: 707 QALRRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQV 528
QALRRTMEIYSNSTRF LACNTSSKIIEPIQSRCA+VRF+RLSDQEILGRLMVVV AE+V
Sbjct: 131 QALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVQAEKV 190
Query: 527 PYVPEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVI 348
PYVPEGLEAIIFTADGDMRQ LNNLQAT SGF FVNQ NVFKVCDQPHPLHVKNMVR VI
Sbjct: 191 PYVPEGLEAIIFTADGDMRQGLNNLQATFSGFQFVNQANVFKVCDQPHPLHVKNMVRNVI 250
Query: 347 EGKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGV 168
EG FD+AC+GLK+LYDLGYSPTDIITTLFRIIK+YDM EYLKLEFMKETGFAHMRICDGV
Sbjct: 251 EGNFDEACSGLKQLYDLGYSPTDIITTLFRIIKSYDMAEYLKLEFMKETGFAHMRICDGV 310
Query: 167 GSYXXXXXXXXXXXLVRETA 108
GSY LVR+TA
Sbjct: 311 GSYLQMCGLLAKFALVRDTA 330
>gb|EOY24643.1| Replication factor C / DNA polymerase III gamma-tau subunit isoform 2
[Theobroma cacao]
Length = 393
Score = 562 bits (1448), Expect = e-157
Identities = 279/302 (92%), Positives = 291/302 (96%)
Frame = -3
Query: 1064 GPEIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHE 885
G ++PWVEKYRP KV+DIVGNEDAV+RLQVIA DGNMPNLIL+GPPGTGKTTSILALAHE
Sbjct: 11 GYDVPWVEKYRPNKVSDIVGNEDAVSRLQVIAHDGNMPNLILSGPPGTGKTTSILALAHE 70
Query: 884 LLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQ 705
LLG NY+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKI+ILDEADSMTSGAQQ
Sbjct: 71 LLGTNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSGAQQ 130
Query: 704 ALRRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVP 525
ALRRTMEIYSNSTRF LACNTSSKIIEPIQSRCALVRF+RLSDQEILGRLMVVV AE+VP
Sbjct: 131 ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMVVVDAEKVP 190
Query: 524 YVPEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIE 345
YVPEGLEAIIFTADGDMRQALNNLQAT SGF FVNQENVFKVCDQPHPLHVKNMVR V+E
Sbjct: 191 YVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQPHPLHVKNMVRYVLE 250
Query: 344 GKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVG 165
G+FDDAC GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVG
Sbjct: 251 GRFDDACLGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 310
Query: 164 SY 159
SY
Sbjct: 311 SY 312
>ref|XP_002886430.1| hypothetical protein ARALYDRAFT_475032 [Arabidopsis lyrata subsp.
lyrata] gi|297332271|gb|EFH62689.1| hypothetical protein
ARALYDRAFT_475032 [Arabidopsis lyrata subsp. lyrata]
Length = 334
Score = 561 bits (1447), Expect = e-157
Identities = 280/316 (88%), Positives = 294/316 (93%)
Frame = -3
Query: 1052 PWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGP 873
PWVEKYRP+KV DIVGNEDAV+RLQVIARDGNMPNLIL+GPPGTGKTTSILALAHELLGP
Sbjct: 17 PWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGP 76
Query: 872 NYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQALRR 693
NY+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEADSMTSGAQQALRR
Sbjct: 77 NYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQALRR 136
Query: 692 TMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYVPE 513
T+EIYSNSTRF LACNTSSKIIEPIQSRCALVRF+RLSDQ+ILGRL+VVV AE VPYVPE
Sbjct: 137 TIEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQQILGRLLVVVEAENVPYVPE 196
Query: 512 GLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGKFD 333
GLEAIIFTADGDMRQALNNLQAT SGF FVNQENVFKVCDQPHPLHVKN+VR V+E KFD
Sbjct: 197 GLEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQPHPLHVKNIVRNVLESKFD 256
Query: 332 DACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSYXX 153
DAC GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVGSY
Sbjct: 257 DACHGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQ 316
Query: 152 XXXXXXXXXLVRETAK 105
+ RETAK
Sbjct: 317 LCGLLAKLSIARETAK 332
>ref|XP_002283246.1| PREDICTED: replication factor C subunit 2 [Vitis vinifera]
gi|297742576|emb|CBI34725.3| unnamed protein product
[Vitis vinifera]
Length = 330
Score = 561 bits (1446), Expect = e-157
Identities = 281/318 (88%), Positives = 295/318 (92%)
Frame = -3
Query: 1058 EIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELL 879
++PWVEKYRPTKVADIVGNED V+RLQVIARDGNMPNLIL+GPPGTGKTTS+LALAHELL
Sbjct: 11 DMPWVEKYRPTKVADIVGNEDTVSRLQVIARDGNMPNLILSGPPGTGKTTSVLALAHELL 70
Query: 878 GPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQAL 699
G NYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLP G HKI+ILDEADSMT+GAQQAL
Sbjct: 71 GANYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPSGSHKIVILDEADSMTTGAQQAL 130
Query: 698 RRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYV 519
RRTMEIYSNSTRF LACN SSKIIEPIQSRCA+VRF+RLSDQEILGRLMVVV AE+VP+V
Sbjct: 131 RRTMEIYSNSTRFALACNISSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVEAEKVPFV 190
Query: 518 PEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGK 339
PEGLEAIIFTADGDMRQALNNLQAT SGF FVNQENVFKVCDQPHPLHVKNMVR V+EGK
Sbjct: 191 PEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNVLEGK 250
Query: 338 FDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSY 159
FDDAC GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVGSY
Sbjct: 251 FDDACYGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSY 310
Query: 158 XXXXXXXXXXXLVRETAK 105
+VRETAK
Sbjct: 311 LQLCGLLAKLAVVRETAK 328
>gb|ESW27549.1| hypothetical protein PHAVU_003G211700g [Phaseolus vulgaris]
Length = 330
Score = 558 bits (1439), Expect = e-156
Identities = 279/318 (87%), Positives = 294/318 (92%)
Frame = -3
Query: 1058 EIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELL 879
++PWVEKYRP KVADIVGNEDAV+RLQVIARDGNMPNLIL+GPPGTGKTTSILALAHELL
Sbjct: 11 DVPWVEKYRPNKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELL 70
Query: 878 GPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQAL 699
GPN +E VLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKI+ILDEADSMT+GAQQAL
Sbjct: 71 GPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTTGAQQAL 130
Query: 698 RRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYV 519
RRTMEIYSNSTRF LACNTS+KIIEPIQSRCA+VRF+RL DQEILGRLM+VV AE+VPYV
Sbjct: 131 RRTMEIYSNSTRFALACNTSAKIIEPIQSRCAIVRFSRLLDQEILGRLMIVVQAEKVPYV 190
Query: 518 PEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGK 339
PEGLEAIIFTADGDMRQALNNLQAT SGF FVNQ NVFKVCDQPHPLHVKNMVR VIEG
Sbjct: 191 PEGLEAIIFTADGDMRQALNNLQATYSGFQFVNQANVFKVCDQPHPLHVKNMVRNVIEGN 250
Query: 338 FDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSY 159
FD+AC+GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVGSY
Sbjct: 251 FDEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSY 310
Query: 158 XXXXXXXXXXXLVRETAK 105
LVRE AK
Sbjct: 311 LQLCGLLAKLSLVRENAK 328
>ref|NP_176504.1| replication factor C 2 [Arabidopsis thaliana]
gi|75169912|sp|Q9CAM7.1|RFC2_ARATH RecName:
Full=Replication factor C subunit 2; Short=AtRFC2;
AltName: Full=Activator 1 subunit 2; AltName:
Full=Protein EMBRYO DEFECTIVE 2811
gi|12323266|gb|AAG51618.1|AC010795_22 replication factor,
putative; 74998-73295 [Arabidopsis thaliana]
gi|182623790|gb|ACB88833.1| At1g63160 [Arabidopsis
thaliana] gi|332195942|gb|AEE34063.1| replication factor
C 2 [Arabidopsis thaliana]
Length = 333
Score = 558 bits (1439), Expect = e-156
Identities = 279/316 (88%), Positives = 295/316 (93%)
Frame = -3
Query: 1052 PWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGP 873
PWVEKYRP+KV DIVGNEDAV+RLQVIARDGNMPNLIL+GPPGTGKTTSILALAHELLG
Sbjct: 16 PWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGT 75
Query: 872 NYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQALRR 693
NY+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEADSMTSGAQQALRR
Sbjct: 76 NYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQALRR 135
Query: 692 TMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYVPE 513
T+EIYSNSTRF LACNTS+KIIEPIQSRCALVRF+RLSDQ+ILGRL+VVVAAE+VPYVPE
Sbjct: 136 TIEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDQQILGRLLVVVAAEKVPYVPE 195
Query: 512 GLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGKFD 333
GLEAIIFTADGDMRQALNNLQAT SGF FVNQENVFKVCDQPHPLHVKN+VR V+E KFD
Sbjct: 196 GLEAIIFTADGDMRQALNNLQATFSGFSFVNQENVFKVCDQPHPLHVKNIVRNVLESKFD 255
Query: 332 DACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSYXX 153
AC GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVGSY
Sbjct: 256 IACDGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQ 315
Query: 152 XXXXXXXXXLVRETAK 105
+VRETAK
Sbjct: 316 LCGLLAKLSIVRETAK 331
>dbj|BAB69675.1| replication factor C 40kDa subunit [Oryza sativa Japonica Group]
gi|116310007|emb|CAH67033.1| OSIGBa0139P06.6 [Oryza
sativa Indica Group] gi|218195393|gb|EEC77820.1|
hypothetical protein OsI_17026 [Oryza sativa Indica
Group]
Length = 335
Score = 558 bits (1438), Expect = e-156
Identities = 276/318 (86%), Positives = 298/318 (93%)
Frame = -3
Query: 1058 EIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELL 879
+IPWVEKYRPT+VAD+VGN DAVARLQVIARDGNMPNLIL+GPPGTGKTTSIL+LAHELL
Sbjct: 16 DIPWVEKYRPTRVADVVGNSDAVARLQVIARDGNMPNLILSGPPGTGKTTSILSLAHELL 75
Query: 878 GPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQAL 699
GP+YREAVLELNASDDRG+DVVRNKIKMFAQKKVTL PGRHKI+ILDEADSMTSGAQQAL
Sbjct: 76 GPSYREAVLELNASDDRGLDVVRNKIKMFAQKKVTLQPGRHKIVILDEADSMTSGAQQAL 135
Query: 698 RRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYV 519
RRTMEIYSN+TRF LACNTSSKIIEPIQSRCA+VRF+RLSDQEILGRLM+VVAAE+VPYV
Sbjct: 136 RRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMIVVAAEKVPYV 195
Query: 518 PEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGK 339
PEGLEAIIFTADGDMRQALNNLQAT SGF FVNQENVFKVCDQPHPLHVKNMV+ V++GK
Sbjct: 196 PEGLEAIIFTADGDMRQALNNLQATVSGFRFVNQENVFKVCDQPHPLHVKNMVKNVLDGK 255
Query: 338 FDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSY 159
FD+AC+ LK+LYDLGYSPTDIITTLFR+IKNYDM EYLKLE +KETGFAHMRICDGVGS+
Sbjct: 256 FDEACSALKQLYDLGYSPTDIITTLFRVIKNYDMAEYLKLELLKETGFAHMRICDGVGSF 315
Query: 158 XXXXXXXXXXXLVRETAK 105
LVRETAK
Sbjct: 316 LQLSGLLAKFALVRETAK 333
>ref|XP_006857848.1| hypothetical protein AMTR_s00069p00063160 [Amborella trichopoda]
gi|548861950|gb|ERN19315.1| hypothetical protein
AMTR_s00069p00063160 [Amborella trichopoda]
Length = 331
Score = 558 bits (1438), Expect = e-156
Identities = 276/320 (86%), Positives = 298/320 (93%)
Frame = -3
Query: 1064 GPEIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHE 885
G E+PWVEKYRP KVA++VGN+DAV+RLQVIARDGNMPNLIL+GPPGTGKT+SILALAHE
Sbjct: 10 GYELPWVEKYRPVKVAEVVGNQDAVSRLQVIARDGNMPNLILSGPPGTGKTSSILALAHE 69
Query: 884 LLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQ 705
LLG N++EAVLELNASDDRGIDVVRNKIKMFAQKKVTL PGRHKII+LDEADSMT+GAQQ
Sbjct: 70 LLGTNFKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLSPGRHKIIVLDEADSMTTGAQQ 129
Query: 704 ALRRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVP 525
ALRRTMEIYSNSTRF LACNTSSKIIEPIQSRCA+VRF+RLSDQEILGRLM+VV AE+VP
Sbjct: 130 ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMIVVDAEKVP 189
Query: 524 YVPEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIE 345
YVPEGLEA+IFTADGDMRQALNNLQAT SGF FVNQENVFKVCDQPHPLHVKNMVR VI+
Sbjct: 190 YVPEGLEAVIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNVID 249
Query: 344 GKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVG 165
GKF++AC+GLK+LYDLGYSPTDIITTLFRIIKNYDMPEYLKLEF+KETGFAHMRICDGVG
Sbjct: 250 GKFEEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFLKETGFAHMRICDGVG 309
Query: 164 SYXXXXXXXXXXXLVRETAK 105
S VRETAK
Sbjct: 310 SLLQLCGLLAKLSRVRETAK 329