BLASTX nr result

ID: Rehmannia25_contig00011078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00011078
         (374 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidop...   108   6e-22
emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]   101   9e-20
dbj|BAB02145.1| copia-like retroelement pol polyprotein-like [Ar...   101   1e-19
gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thal...   101   1e-19
emb|CAA31653.1| polyprotein [Arabidopsis thaliana]                    100   3e-19
emb|CAA37920.1| unnamed protein product [Arabidopsis thaliana]        100   3e-19
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]    99   8e-19
pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrot...    97   2e-18
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]         97   2e-18
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar...    96   4e-18
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]    94   1e-17
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]    94   1e-17
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi...    93   3e-17
pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis t...    92   5e-17
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...    92   5e-17
emb|CAN69096.1| hypothetical protein VITISV_025437 [Vitis vinifera]    92   7e-17
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...    91   1e-16
emb|CAN74382.1| hypothetical protein VITISV_007945 [Vitis vinifera]    91   2e-16
emb|CAN71688.1| hypothetical protein VITISV_015290 [Vitis vinifera]    91   2e-16
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc...    89   6e-16

>gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1166

 Score =  108 bits (271), Expect = 6e-22
 Identities = 53/118 (44%), Positives = 83/118 (70%), Gaps = 1/118 (0%)
 Frame = +2

Query: 11   ENVDNAEMHDDLVDLNDNEPEELGNYQLARDRTRR-NIRQPTRFDDFQMISYVFSVFESI 187
            EN++ +EM++++V  ++NE + L +Y LARD  RR NIR P+RF+D   ++Y  +  E +
Sbjct: 671  ENLEESEMNEEVVG-SENE-QSLDDYLLARDMKRRSNIRPPSRFEDEDFVAYALATAEDL 728

Query: 188  DNCEPKTYQDALKSEHSQEWLNAMHEEMNSLHVNNTWILVPKPENCSLVDCKWLFKVK 361
            +  EPK+Y++ALKS   ++W NAM EEM+S   ++TW L+ KPE   L+ CKW+FK+K
Sbjct: 729  EEEEPKSYEEALKSSKRKQWENAMKEEMDSHKKSHTWDLIEKPEKQKLIGCKWIFKLK 786


>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
          Length = 939

 Score =  101 bits (252), Expect = 9e-20
 Identities = 50/116 (43%), Positives = 65/116 (56%)
 Frame = +2

Query: 14  NVDNAEMHDDLVDLNDNEPEELGNYQLARDRTRRNIRQPTRFDDFQMISYVFSVFESIDN 193
           N +N E+ D            L NYQL RD  RR+IR P RF    M++Y  S+ E +  
Sbjct: 396 NKENGEVKDKFETKPQQYDIPLENYQLTRDGARRSIRPPQRFGYNDMVAYSLSIGEELSC 455

Query: 194 CEPKTYQDALKSEHSQEWLNAMHEEMNSLHVNNTWILVPKPENCSLVDCKWLFKVK 361
            EPK Y +A+  + S +W+ AM EE  SL  N TW LV KP+ C +V CKW+FK K
Sbjct: 456 AEPKNYLEAISCKDSPKWMTAMQEEFESLLKNGTWQLVDKPKGCKVVGCKWVFKKK 511


>dbj|BAB02145.1| copia-like retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 348

 Score =  101 bits (251), Expect = 1e-19
 Identities = 50/118 (42%), Positives = 81/118 (68%), Gaps = 1/118 (0%)
 Frame = +2

Query: 11  ENVDNAEMHDDLVDLNDNEPEELGNYQLARDRTRR-NIRQPTRFDDFQMISYVFSVFESI 187
           EN++ +E +++ VD ++NE + L +Y LAR+R RR NIR P+RF D   ++Y  +  E +
Sbjct: 143 ENLEESETNEE-VDGSENE-QSLDDYLLARERKRRSNIRPPSRFKDGDFVAYALATEEDL 200

Query: 188 DNCEPKTYQDALKSEHSQEWLNAMHEEMNSLHVNNTWILVPKPENCSLVDCKWLFKVK 361
           +  EPK+Y++A+K    ++W +AM EEM+S   ++TW L+ KPE   L+ CKW+FK+K
Sbjct: 201 EIEEPKSYEEAMKRSKRKQWESAMKEEMDSHQKSHTWDLIEKPEKQKLIGCKWIFKLK 258


>gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thaliana]
          Length = 855

 Score =  101 bits (251), Expect = 1e-19
 Identities = 51/121 (42%), Positives = 73/121 (60%), Gaps = 3/121 (2%)
 Frame = +2

Query: 11  ENVDNAEMHDDLVDLNDNEPEE---LGNYQLARDRTRRNIRQPTRFDDFQMISYVFSVFE 181
           E+ +N E   + V+  D   E    L NYQLA+DR RR I  P RF +   +++   V E
Sbjct: 451 ESDENDEQEPETVNETDPTVESEGSLANYQLAKDRVRRQINPPARFTEESGVAFALVVVE 510

Query: 182 SIDNCEPKTYQDALKSEHSQEWLNAMHEEMNSLHVNNTWILVPKPENCSLVDCKWLFKVK 361
           S+   EP++YQ+A + +   +W NA HEEM+SL  N TW LV KP N  ++ C+WLFK+K
Sbjct: 511 SLSLEEPESYQEATQDKEWLKWKNATHEEMDSLIKNGTWDLVDKPTNRKIIGCRWLFKLK 570

Query: 362 N 364
           +
Sbjct: 571 S 571


>emb|CAA31653.1| polyprotein [Arabidopsis thaliana]
          Length = 1291

 Score =  100 bits (248), Expect = 3e-19
 Identities = 47/119 (39%), Positives = 74/119 (62%), Gaps = 1/119 (0%)
 Frame = +2

Query: 11   ENVDNAEMHDDLVDLNDNEP-EELGNYQLARDRTRRNIRQPTRFDDFQMISYVFSVFESI 187
            E+V+  +  +  V+L + +    L NYQLARDR RR I  P RF +   +++     E++
Sbjct: 782  ESVEEEQEPETQVELPETQTTSSLANYQLARDRERRQIHPPARFTEESGVAFALVTVETL 841

Query: 188  DNCEPKTYQDALKSEHSQEWLNAMHEEMNSLHVNNTWILVPKPENCSLVDCKWLFKVKN 364
               EP++YQ+A   +  ++W  A HEEM+SL  N TW+LV KP+N  ++ C+WLFK+K+
Sbjct: 842  SMEEPQSYQEATSDKEWKKWKLATHEEMDSLIKNGTWVLVDKPQNRKIIGCRWLFKLKS 900


>emb|CAA37920.1| unnamed protein product [Arabidopsis thaliana]
          Length = 494

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 47/119 (39%), Positives = 75/119 (63%), Gaps = 1/119 (0%)
 Frame = +2

Query: 11  ENVDNAEMHDDLVDLNDNEP-EELGNYQLARDRTRRNIRQPTRFDDFQMISYVFSVFESI 187
           E+VD  +  +  V+L + +    L NYQLARDR RR I  P RF +   +++     E++
Sbjct: 7   ESVDEEQEPEPQVELPETQTTSSLANYQLARDRERRQIHPPARFTEESGVAFALVTVETL 66

Query: 188 DNCEPKTYQDALKSEHSQEWLNAMHEEMNSLHVNNTWILVPKPENCSLVDCKWLFKVKN 364
              EP++YQ+A  ++  ++W  A HEEM+SL  N TW+LV KP++  ++ C+WLFK+K+
Sbjct: 67  SMEEPQSYQEATSNKEWKKWKLATHEEMDSLIKNGTWVLVDKPKDRKIIGCRWLFKMKS 125


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 46/109 (42%), Positives = 70/109 (64%), Gaps = 1/109 (0%)
 Frame = +2

Query: 38   DDLVDLNDNEPEE-LGNYQLARDRTRRNIRQPTRFDDFQMISYVFSVFESIDNCEPKTYQ 214
            +++V    NEP + L +Y L RDR +R ++ P R+   +M ++  SV E I + EPKTYQ
Sbjct: 716  EEIVHERQNEPTQGLESYNLVRDRQKRQVKPPKRYGQAEMTAFALSVAEEIVDMEPKTYQ 775

Query: 215  DALKSEHSQEWLNAMHEEMNSLHVNNTWILVPKPENCSLVDCKWLFKVK 361
            +A+ S  + +W+ A+ EEM+SL  N TW LV KP++  +V  KW+FK K
Sbjct: 776  EAINSNEADQWVKAIQEEMDSLRKNETWELVTKPKDRKVVGSKWVFKRK 824


>pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrotransposon Ta1-2
            (strain Landsberg) (fragment) gi|16384|emb|CAA37924.1|
            unnamed protein product [Arabidopsis thaliana]
          Length = 1084

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 46/119 (38%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
 Frame = +2

Query: 11   ENVDNAEMHDDLVDLNDNEP-EELGNYQLARDRTRRNIRQPTRFDDFQMISYVFSVFESI 187
            E+VD  +  +  V+L + +    L NYQL RDR RR I  P RF +   +++     E++
Sbjct: 682  ESVDEEQEPEPQVELPETQTTSSLANYQLVRDRERRQIHPPARFTEESGVAFALVTVETL 741

Query: 188  DNCEPKTYQDALKSEHSQEWLNAMHEEMNSLHVNNTWILVPKPENCSLVDCKWLFKVKN 364
               EP++YQ+A   +  ++W  A HEE NSL  N TW+LV KP++  ++ C+WLFK+K+
Sbjct: 742  SMEEPQSYQEATSDKEWKKWKLATHEEKNSLIKNGTWVLVDKPKDRKIIGCRWLFKMKS 800


>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 44/98 (44%), Positives = 62/98 (63%)
 Frame = +2

Query: 74   ELGNYQLARDRTRRNIRQPTRFDDFQMISYVFSVFESIDNCEPKTYQDALKSEHSQEWLN 253
            +L NYQLARDR RR +R P R+    +I+Y     + +   EP  + +A++S H  +WL 
Sbjct: 772  DLQNYQLARDRVRREVRAPVRYGYADLIAYALLCADEVTIEEPANFSEAMESVHCDKWLE 831

Query: 254  AMHEEMNSLHVNNTWILVPKPENCSLVDCKWLFKVKNE 367
            AM +EM SL  N TW L+P P N  L++CKW+FK +NE
Sbjct: 832  AMQDEMESLQRNQTWTLIPNPGNKRLINCKWIFK-RNE 868


>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 46/120 (38%), Positives = 74/120 (61%), Gaps = 2/120 (1%)
 Frame = +2

Query: 11   ENVDNAEMHDDLVDLNDNEPEELG--NYQLARDRTRRNIRQPTRFDDFQMISYVFSVFES 184
            E   ++E   +  +     P+  G   Y+LARDR RRNI  PTRF +   +++   V E+
Sbjct: 774  EQSSDSEEEVEYSEKTQETPKRTGLTTYKLARDRVRRNINPPTRFTEESSVTFALVVVEN 833

Query: 185  IDNCEPKTYQDALKSEHSQEWLNAMHEEMNSLHVNNTWILVPKPENCSLVDCKWLFKVKN 364
                EP++YQ+A++S+  ++W  A H+EM+SL  N TW LV KP++  ++ C+WLFK+K+
Sbjct: 834  CIVQEPQSYQEAMESQDCEKWDMATHDEMDSLMKNGTWDLVDKPKDRKIIGCRWLFKLKS 893


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 48/126 (38%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
 Frame = +2

Query: 5    MPENVDNAEMHDDLVDLNDNEPEELGNYQLARDRTRRNIRQPTRFDDF------QMISYV 166
            M   VD+      ++D ND++        +A  R RR IR+P R+ D         +++ 
Sbjct: 850  MENGVDDTSEEQPVIDQNDSQ-------SIAAHRPRREIRRPMRYVDCVSANITNPVAFA 902

Query: 167  FSVFESIDNCEPKTYQDALKSEHSQEWLNAMHEEMNSLHVNNTWILVPKPENCSLVDCKW 346
             +V E I   EP++Y++A++S+ S++WL++M +EM SL  N TW LVP PE    VDCKW
Sbjct: 903  LAVAEEIGREEPRSYKEAMESKDSKKWLSSMDDEMASLRKNQTWELVPLPEGVKPVDCKW 962

Query: 347  LFKVKN 364
            LFK+K+
Sbjct: 963  LFKIKD 968


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 48/126 (38%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
 Frame = +2

Query: 5    MPENVDNAEMHDDLVDLNDNEPEELGNYQLARDRTRRNIRQPTRFDDF------QMISYV 166
            M   VD+      ++D ND++        +A  R RR IR+P R+ D         +++ 
Sbjct: 1063 MENGVDDTSEEQPVIDQNDSQ-------SIAAXRPRREIRRPMRYVDCVSANITNPVAFA 1115

Query: 167  FSVFESIDNCEPKTYQDALKSEHSQEWLNAMHEEMNSLHVNNTWILVPKPENCSLVDCKW 346
             +V E I   EP++Y++A++S+ S++WL++M +EM SL  N TW LVP PE    VDCKW
Sbjct: 1116 LAVAEEIGREEPRSYKEAMESKDSKKWLSSMDDEMASLRKNQTWELVPLPEGVKPVDCKW 1175

Query: 347  LFKVKN 364
            LFK+K+
Sbjct: 1176 LFKIKD 1181


>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1342

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 44/110 (40%), Positives = 70/110 (63%), Gaps = 2/110 (1%)
 Frame = +2

Query: 38   DDLVDLNDNEPEELGNYQLARDRTRRNIRQPTRF--DDFQMISYVFSVFESIDNCEPKTY 211
            D  V+  D++ + L NY LARDR RR IR P RF  +D  ++ +  ++ E  +  EP+TY
Sbjct: 767  DKQVEETDSDDDCLENYLLARDRIRRQIRAPQRFVEEDDSLVGFALTMTEDGEVYEPETY 826

Query: 212  QDALKSEHSQEWLNAMHEEMNSLHVNNTWILVPKPENCSLVDCKWLFKVK 361
            ++A++S   ++W  A  EEM+S+  N+TW ++ KPE   ++ CKW+FK K
Sbjct: 827  EEAMRSPECEKWKQATIEEMDSMKKNDTWDVIDKPEGKRVIGCKWIFKRK 876


>pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis thaliana
           retrotransposon Ta1 (fragment) gi|16356|emb|CAA37917.1|
           reverse transcriptase [Arabidopsis thaliana]
          Length = 587

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
 Frame = +2

Query: 11  ENVDNAEMHDDLVDLNDNEP-EELGNYQLARDRTRRNIRQPTRFDDFQMISYVFSVFESI 187
           E V+  +  +  V+L   +    L  YQLA+DR RR I  P RF +   +++     E++
Sbjct: 6   ETVEEEQEPEPQVELPKTQTTSSLAYYQLAKDRERREIHPPARFTEESGVAFALVTVETL 65

Query: 188 DNCEPKTYQDALKSEHSQEWLNAMHEEMNSLHVNNTWILVPKPENCSLVDCKWLFKVKN 364
              EP++YQ+A   +  ++W  A HEEM+SL  N TW+LV KP++  ++ C+WLFK+K+
Sbjct: 66  SMEEPQSYQEATSDKEWKKWKLATHEEMDSLIKNGTWVLVDKPQDRKIIGCRWLFKMKS 124


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 46/119 (38%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
 Frame = +2

Query: 8    PENVDNAEMHDDLVDLNDNEPEELGNYQLARDRTRR-NIRQPTRFDDFQMISYVFSVFES 184
            PE  D     +   D+ ++ P ++ +  +A+DR RR  +R PTR+    M+ Y   V E 
Sbjct: 729  PEEEDQEPQTE--TDIPESMPSDI-HQSIAQDRPRRVGVRPPTRYGFEDMVGYALQVAEE 785

Query: 185  IDNCEPKTYQDALKSEHSQEWLNAMHEEMNSLHVNNTWILVPKPENCSLVDCKWLFKVK 361
            +D  EP TY++A+ S  S++W  AM +EM SLH N TW LV +P    ++ CKW+FK K
Sbjct: 786  VDTSEPSTYKEAILSSDSEKWFAAMGDEMESLHKNQTWDLVIQPSGRKIITCKWVFKKK 844


>emb|CAN69096.1| hypothetical protein VITISV_025437 [Vitis vinifera]
          Length = 992

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 42/101 (41%), Positives = 64/101 (63%)
 Frame = +2

Query: 59   DNEPEELGNYQLARDRTRRNIRQPTRFDDFQMISYVFSVFESIDNCEPKTYQDALKSEHS 238
            D   + L +Y LARDR +R ++ P R+   +M ++  SV E I + EPKT Q+A+ S+ +
Sbjct: 892  DEPTQGLESYSLARDRQKRQVKPPKRYGQAEMTTFALSVAEEIVDMEPKTNQEAINSDEA 951

Query: 239  QEWLNAMHEEMNSLHVNNTWILVPKPENCSLVDCKWLFKVK 361
             +W+  + E+M+SL  N TW LV KP++  LV  KW+FK K
Sbjct: 952  NQWVKVIQEKMDSLRKNETWELVTKPKDRKLVGSKWVFKRK 992


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 48/122 (39%), Positives = 72/122 (59%), Gaps = 4/122 (3%)
 Frame = +2

Query: 8    PENVDNAEMHDDLV--DLNDNEPEELGNYQLARDRTRRNIRQPTRF-DDFQMISYVFSVF 178
            PE  D A   D+ V  D N +  ++     +A+DR +RNI+ P R+ ++  +++Y  SV 
Sbjct: 955  PEKEDVAINQDEPVIEDSNSSIVQQSPKRSIAKDRPKRNIKPPQRYIEEANIVAYALSVA 1014

Query: 179  ESID-NCEPKTYQDALKSEHSQEWLNAMHEEMNSLHVNNTWILVPKPENCSLVDCKWLFK 355
            E I+ N EP TY +A+ S+    W+ AMH+EM SL  N+TW LV  P+    + CKW+FK
Sbjct: 1015 EEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFK 1074

Query: 356  VK 361
             K
Sbjct: 1075 RK 1076


>emb|CAN74382.1| hypothetical protein VITISV_007945 [Vitis vinifera]
          Length = 444

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 51/131 (38%), Positives = 73/131 (55%), Gaps = 15/131 (11%)
 Frame = +2

Query: 14  NVDNAEMHDDL---VDLNDN--------EPEE----LGNYQLARDRTRRNIRQPTRFDDF 148
           N +N E+ D L   ++L D         EP++    L NYQL RDR R++IR   RF   
Sbjct: 114 NKENGEVKDKLEFQMELKDKIDATEFEIEPQQYDIPLENYQLTRDRARKSIRPLQRFGYN 173

Query: 149 QMISYVFSVFESIDNCEPKTYQDALKSEHSQEWLNAMHEEMNSLHVNNTWILVPKPENCS 328
            M++   S+ + +   EPK Y + +  + S +W+NAM EE  SL  N T +LV KP+ C 
Sbjct: 174 DMVACSLSIGKELRCAEPKNYLETVSCKDSPKWMNAMQEEFESLFQNGTRLLVDKPKGCK 233

Query: 329 LVDCKWLFKVK 361
           +V CKW+FK K
Sbjct: 234 VVGCKWVFKKK 244


>emb|CAN71688.1| hypothetical protein VITISV_015290 [Vitis vinifera]
          Length = 259

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 44/102 (43%), Positives = 64/102 (62%)
 Frame = +2

Query: 50  DLNDNEPEELGNYQLARDRTRRNIRQPTRFDDFQMISYVFSVFESIDNCEPKTYQDALKS 229
           D N+N P+E   Y LARDR  R I+ P R+     ++Y FSV ++I+  EP+TY + + +
Sbjct: 143 DDNENTPQEQ-QYCLARDRIMRQIKPPQRYSYVDSVAYAFSVAKNIEKEEPQTYHETITN 201

Query: 230 EHSQEWLNAMHEEMNSLHVNNTWILVPKPENCSLVDCKWLFK 355
             S +W+  M+EE+ SL  N TW LV KP+N  +V  KW+FK
Sbjct: 202 RESTQWIITMNEEIESLQKNLTWQLVEKPKNQKIVRYKWVFK 243


>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1138

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 40/94 (42%), Positives = 62/94 (65%), Gaps = 2/94 (2%)
 Frame = +2

Query: 86  YQLARDRTRRNIRQPTRF-DDFQMISYVFSVFESID-NCEPKTYQDALKSEHSQEWLNAM 259
           + +A+D+ +RN R P R+ ++  +++Y  SV E I+ N EP TY +A+ S+    W+ AM
Sbjct: 611 HSIAKDKPKRNTRPPQRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAM 670

Query: 260 HEEMNSLHVNNTWILVPKPENCSLVDCKWLFKVK 361
           H+EM+SL  N+TW LV  P+   L+ CKW+FK K
Sbjct: 671 HDEMDSLEKNHTWKLVKLPKEKKLIHCKWIFKRK 704


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