BLASTX nr result
ID: Rehmannia25_contig00010992
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00010992
(776 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003613959.1| Exosome complex exonuclease RRP40 [Medicago ... 66 1e-08
gb|EMJ10724.1| hypothetical protein PRUPE_ppa010609mg [Prunus pe... 65 2e-08
ref|XP_004138110.1| PREDICTED: putative exosome complex componen... 65 2e-08
ref|XP_002282635.1| PREDICTED: putative exosome complex componen... 65 3e-08
ref|XP_006412506.1| hypothetical protein EUTSA_v10026115mg [Eutr... 64 4e-08
ref|NP_565592.1| PNAS-3 related protein [Arabidopsis thaliana] g... 64 6e-08
ref|XP_004298940.1| PREDICTED: putative exosome complex componen... 63 1e-07
ref|XP_002869291.1| hypothetical protein ARALYDRAFT_491516 [Arab... 62 2e-07
gb|ESW26341.1| hypothetical protein PHAVU_003G111100g [Phaseolus... 62 3e-07
ref|XP_006294895.1| hypothetical protein CARUB_v10023945mg [Caps... 61 4e-07
gb|ESW29698.1| hypothetical protein PHAVU_002G091200g [Phaseolus... 60 8e-07
ref|XP_003518749.1| PREDICTED: putative exosome complex componen... 60 8e-07
ref|XP_002318044.1| exonuclease-related family protein [Populus ... 60 8e-07
ref|XP_006572879.1| PREDICTED: uncharacterized protein LOC100809... 60 1e-06
ref|NP_001241402.1| uncharacterized protein LOC100809941 [Glycin... 60 1e-06
gb|EOY20706.1| PNAS-3 related isoform 3 [Theobroma cacao] 59 2e-06
gb|EOY20704.1| PNAS-3 related isoform 1 [Theobroma cacao] 59 2e-06
ref|XP_006439811.1| hypothetical protein CICLE_v10021986mg [Citr... 58 4e-06
ref|XP_004969374.1| PREDICTED: putative exosome complex componen... 57 7e-06
>ref|XP_003613959.1| Exosome complex exonuclease RRP40 [Medicago truncatula]
gi|217074508|gb|ACJ85614.1| unknown [Medicago
truncatula] gi|355515294|gb|AES96917.1| Exosome complex
exonuclease RRP40 [Medicago truncatula]
gi|388510130|gb|AFK43131.1| unknown [Medicago
truncatula]
Length = 240
Score = 66.2 bits (160), Expect = 1e-08
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = -3
Query: 774 KPSTTPSSFIDQQVFPGDVVMDLSKMANQTIKLGGGLRQDGDV 646
K + + ++F+DQ V+PGDVV+DLS M NQTIKLGGGLRQDGDV
Sbjct: 4 KSAGSSTNFVDQLVYPGDVVLDLSTMTNQTIKLGGGLRQDGDV 46
>gb|EMJ10724.1| hypothetical protein PRUPE_ppa010609mg [Prunus persica]
Length = 243
Score = 65.5 bits (158), Expect = 2e-08
Identities = 30/42 (71%), Positives = 36/42 (85%)
Frame = -3
Query: 774 KPSTTPSSFIDQQVFPGDVVMDLSKMANQTIKLGGGLRQDGD 649
K + +P+SF+DQ V PGDVV+DL+ MANQTIKLGGGLRQD D
Sbjct: 4 KATGSPASFVDQSVVPGDVVLDLTSMANQTIKLGGGLRQDCD 45
>ref|XP_004138110.1| PREDICTED: putative exosome complex component rrp40-like [Cucumis
sativus] gi|449477413|ref|XP_004155016.1| PREDICTED:
putative exosome complex component rrp40-like [Cucumis
sativus]
Length = 243
Score = 65.5 bits (158), Expect = 2e-08
Identities = 30/42 (71%), Positives = 36/42 (85%)
Frame = -3
Query: 774 KPSTTPSSFIDQQVFPGDVVMDLSKMANQTIKLGGGLRQDGD 649
KPS++ S+ +DQ V PGDVV+DLS MAN+TIKLGGGLRQD D
Sbjct: 4 KPSSSSSTLVDQPVVPGDVVLDLSNMANETIKLGGGLRQDQD 45
>ref|XP_002282635.1| PREDICTED: putative exosome complex component rrp40 [Vitis
vinifera] gi|297733775|emb|CBI15022.3| unnamed protein
product [Vitis vinifera]
Length = 237
Score = 64.7 bits (156), Expect = 3e-08
Identities = 30/38 (78%), Positives = 33/38 (86%)
Frame = -3
Query: 762 TPSSFIDQQVFPGDVVMDLSKMANQTIKLGGGLRQDGD 649
TP+SF+DQ V PGDVV+DLSKM NQTIKLGGGL QD D
Sbjct: 5 TPASFVDQLVVPGDVVLDLSKMGNQTIKLGGGLHQDCD 42
>ref|XP_006412506.1| hypothetical protein EUTSA_v10026115mg [Eutrema salsugineum]
gi|557113676|gb|ESQ53959.1| hypothetical protein
EUTSA_v10026115mg [Eutrema salsugineum]
Length = 240
Score = 64.3 bits (155), Expect = 4e-08
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = -3
Query: 774 KPSTTPSSFIDQQVFPGDVVMDLSKMANQTIKLGGGLRQDGD 649
K S +P S IDQ V PGDVV+DLS M NQTIKLG GLRQDGD
Sbjct: 4 KVSVSPKSLIDQIVVPGDVVLDLSNMTNQTIKLGSGLRQDGD 45
>ref|NP_565592.1| PNAS-3 related protein [Arabidopsis thaliana]
gi|15010706|gb|AAK74012.1| At2g25350/F13B15.1
[Arabidopsis thaliana] gi|20197753|gb|AAM15233.1|
Expressed protein [Arabidopsis thaliana]
gi|20198061|gb|AAM15377.1| Expressed protein
[Arabidopsis thaliana] gi|23308267|gb|AAN18103.1|
At2g25350/F13B15.1 [Arabidopsis thaliana]
gi|330252599|gb|AEC07693.1| PNAS-3 related protein
[Arabidopsis thaliana]
Length = 241
Score = 63.9 bits (154), Expect = 6e-08
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = -3
Query: 768 STTPSSFIDQQVFPGDVVMDLSKMANQTIKLGGGLRQDGDV 646
ST+P+S IDQ V PGDVV+DLS M NQTIKLG GLRQD +V
Sbjct: 6 STSPTSLIDQTVVPGDVVLDLSNMTNQTIKLGSGLRQDNEV 46
>ref|XP_004298940.1| PREDICTED: putative exosome complex component rrp40-like [Fragaria
vesca subsp. vesca]
Length = 241
Score = 62.8 bits (151), Expect = 1e-07
Identities = 28/37 (75%), Positives = 33/37 (89%)
Frame = -3
Query: 759 PSSFIDQQVFPGDVVMDLSKMANQTIKLGGGLRQDGD 649
P++F+DQ V PGDVV+DL+ MANQTIKLGGGLRQD D
Sbjct: 6 PANFVDQSVVPGDVVLDLTNMANQTIKLGGGLRQDCD 42
>ref|XP_002869291.1| hypothetical protein ARALYDRAFT_491516 [Arabidopsis lyrata subsp.
lyrata] gi|297315127|gb|EFH45550.1| hypothetical protein
ARALYDRAFT_491516 [Arabidopsis lyrata subsp. lyrata]
Length = 241
Score = 62.0 bits (149), Expect = 2e-07
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3
Query: 774 KPSTTPSSFIDQQVFPGDVVMDLSKMANQTIKLGGGLRQDGDV 646
K S +P+S IDQ V PGDVV+DLS M NQTIKLG GL QD DV
Sbjct: 4 KVSVSPTSLIDQIVVPGDVVLDLSNMTNQTIKLGSGLHQDNDV 46
>gb|ESW26341.1| hypothetical protein PHAVU_003G111100g [Phaseolus vulgaris]
Length = 240
Score = 61.6 bits (148), Expect = 3e-07
Identities = 29/42 (69%), Positives = 34/42 (80%)
Frame = -3
Query: 774 KPSTTPSSFIDQQVFPGDVVMDLSKMANQTIKLGGGLRQDGD 649
KPS+ ++ +DQ V PGDVV+DLS M NQTIKLGGGLRQD D
Sbjct: 4 KPSSYSTNLVDQLVCPGDVVLDLSSMTNQTIKLGGGLRQDCD 45
>ref|XP_006294895.1| hypothetical protein CARUB_v10023945mg [Capsella rubella]
gi|482563603|gb|EOA27793.1| hypothetical protein
CARUB_v10023945mg [Capsella rubella]
Length = 241
Score = 61.2 bits (147), Expect = 4e-07
Identities = 29/40 (72%), Positives = 32/40 (80%)
Frame = -3
Query: 768 STTPSSFIDQQVFPGDVVMDLSKMANQTIKLGGGLRQDGD 649
ST+P+S I Q V PGDVV+DLS M NQTIKLG GLRQD D
Sbjct: 6 STSPTSLIGQTVVPGDVVLDLSNMTNQTIKLGSGLRQDND 45
>gb|ESW29698.1| hypothetical protein PHAVU_002G091200g [Phaseolus vulgaris]
Length = 240
Score = 60.1 bits (144), Expect = 8e-07
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = -3
Query: 774 KPSTTPSSFIDQQVFPGDVVMDLSKMANQTIKLGGGLRQDGD 649
KPS+ ++ +DQ V PGDV++DLS M NQTIKLGGGLRQD D
Sbjct: 4 KPSSYFANLVDQLVCPGDVILDLSSMTNQTIKLGGGLRQDCD 45
>ref|XP_003518749.1| PREDICTED: putative exosome complex component rrp40-like isoform X1
[Glycine max] gi|571439680|ref|XP_006574927.1|
PREDICTED: putative exosome complex component rrp40-like
isoform X2 [Glycine max]
Length = 240
Score = 60.1 bits (144), Expect = 8e-07
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = -3
Query: 774 KPSTTPSSFIDQQVFPGDVVMDLSKMANQTIKLGGGLRQDGD 649
K S++ ++ +DQ V PGDV++DLS M NQTIKLGGGLRQD D
Sbjct: 4 KSSSSSTNLVDQSVCPGDVILDLSNMTNQTIKLGGGLRQDCD 45
>ref|XP_002318044.1| exonuclease-related family protein [Populus trichocarpa]
gi|118482713|gb|ABK93275.1| unknown [Populus
trichocarpa] gi|222858717|gb|EEE96264.1|
exonuclease-related family protein [Populus trichocarpa]
Length = 242
Score = 60.1 bits (144), Expect = 8e-07
Identities = 29/42 (69%), Positives = 33/42 (78%)
Frame = -3
Query: 774 KPSTTPSSFIDQQVFPGDVVMDLSKMANQTIKLGGGLRQDGD 649
K S +P++FID V PGDVV+DLS M NQTIKLG GLRQD D
Sbjct: 4 KSSGSPATFIDNLVVPGDVVVDLSSMTNQTIKLGSGLRQDCD 45
>ref|XP_006572879.1| PREDICTED: uncharacterized protein LOC100809941 isoform X1 [Glycine
max] gi|571433381|ref|XP_006572880.1| PREDICTED:
uncharacterized protein LOC100809941 isoform X2 [Glycine
max] gi|571433383|ref|XP_006572881.1| PREDICTED:
uncharacterized protein LOC100809941 isoform X3 [Glycine
max] gi|571433385|ref|XP_006572882.1| PREDICTED:
uncharacterized protein LOC100809941 isoform X4 [Glycine
max]
Length = 240
Score = 59.7 bits (143), Expect = 1e-06
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = -3
Query: 774 KPSTTPSSFIDQQVFPGDVVMDLSKMANQTIKLGGGLRQDGD 649
K +++ ++ +DQ V PGDVV+DLSKM NQTIKLGGGLRQD D
Sbjct: 4 KSTSSFTNLVDQSVCPGDVVLDLSKMINQTIKLGGGLRQDCD 45
>ref|NP_001241402.1| uncharacterized protein LOC100809941 [Glycine max]
gi|255636017|gb|ACU18353.1| unknown [Glycine max]
Length = 179
Score = 59.7 bits (143), Expect = 1e-06
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = -3
Query: 774 KPSTTPSSFIDQQVFPGDVVMDLSKMANQTIKLGGGLRQDGD 649
K +++ ++ +DQ V PGDVV+DLSKM NQTIKLGGGLRQD D
Sbjct: 4 KSTSSFTNLVDQSVCPGDVVLDLSKMINQTIKLGGGLRQDCD 45
>gb|EOY20706.1| PNAS-3 related isoform 3 [Theobroma cacao]
Length = 230
Score = 58.9 bits (141), Expect = 2e-06
Identities = 29/42 (69%), Positives = 31/42 (73%)
Frame = -3
Query: 774 KPSTTPSSFIDQQVFPGDVVMDLSKMANQTIKLGGGLRQDGD 649
K S +P S ID V PGDVV+DLS M NQTI LGGGLRQD D
Sbjct: 4 KQSGSPPSLIDSTVVPGDVVLDLSSMTNQTIMLGGGLRQDCD 45
>gb|EOY20704.1| PNAS-3 related isoform 1 [Theobroma cacao]
Length = 240
Score = 58.9 bits (141), Expect = 2e-06
Identities = 29/42 (69%), Positives = 31/42 (73%)
Frame = -3
Query: 774 KPSTTPSSFIDQQVFPGDVVMDLSKMANQTIKLGGGLRQDGD 649
K S +P S ID V PGDVV+DLS M NQTI LGGGLRQD D
Sbjct: 4 KQSGSPPSLIDSTVVPGDVVLDLSSMTNQTIMLGGGLRQDCD 45
>ref|XP_006439811.1| hypothetical protein CICLE_v10021986mg [Citrus clementina]
gi|567894648|ref|XP_006439812.1| hypothetical protein
CICLE_v10021986mg [Citrus clementina]
gi|557542073|gb|ESR53051.1| hypothetical protein
CICLE_v10021986mg [Citrus clementina]
gi|557542074|gb|ESR53052.1| hypothetical protein
CICLE_v10021986mg [Citrus clementina]
Length = 238
Score = 57.8 bits (138), Expect = 4e-06
Identities = 29/42 (69%), Positives = 34/42 (80%)
Frame = -3
Query: 774 KPSTTPSSFIDQQVFPGDVVMDLSKMANQTIKLGGGLRQDGD 649
KPSTT + +D+ V PGDVV+DLS M NQTIKLGGGLRQ+ D
Sbjct: 4 KPSTT--NLVDKIVVPGDVVLDLSSMTNQTIKLGGGLRQECD 43
>ref|XP_004969374.1| PREDICTED: putative exosome complex component rrp40-like [Setaria
italica]
Length = 239
Score = 57.0 bits (136), Expect = 7e-06
Identities = 26/37 (70%), Positives = 30/37 (81%)
Frame = -3
Query: 759 PSSFIDQQVFPGDVVMDLSKMANQTIKLGGGLRQDGD 649
PS +D V PGDVV+DLS+M NQTIKLG GLRQ+GD
Sbjct: 8 PSPLVDTYVVPGDVVLDLSEMTNQTIKLGTGLRQEGD 44