BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00010944
         (1258 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus c...   362   2e-97
ref|XP_002276964.1| PREDICTED: peptide deformylase 1B, chloropla...   357   4e-96
ref|XP_006470303.1| PREDICTED: peptide deformylase 1B, chloropla...   352   2e-94
gb|EOY02424.1| Polypeptide deformylase, putative isoform 1 [Theo...   350   5e-94
ref|XP_006446529.1| hypothetical protein CICLE_v10016231mg [Citr...   349   2e-93
gb|EOY02428.1| Polypeptide deformylase, putative isoform 5 [Theo...   346   1e-92
gb|EMJ17002.1| hypothetical protein PRUPE_ppa009947mg [Prunus pe...   346   1e-92
ref|XP_004306350.1| PREDICTED: peptide deformylase 1B, chloropla...   343   9e-92
ref|XP_006288433.1| hypothetical protein CARUB_v10001691mg [Caps...   343   1e-91
ref|XP_006338575.1| PREDICTED: peptide deformylase 1B, chloropla...   342   2e-91
ref|XP_002300047.2| hypothetical protein POPTR_0001s35190g [Popu...   341   4e-91
ref|XP_006399979.1| hypothetical protein EUTSA_v10014367mg [Eutr...   339   1e-90
ref|XP_002873683.1| predicted protein [Arabidopsis lyrata subsp....   338   2e-90
ref|NP_001234441.1| peptide deformylase 1B, chloroplastic [Solan...   337   6e-90
ref|XP_006369928.1| hypothetical protein POPTR_0001s35190g [Popu...   336   1e-89
gb|AAG33980.1|AF269165_1 peptide deformylase [Arabidopsis thaliana]   336   1e-89
ref|XP_004158319.1| PREDICTED: peptide deformylase 1B, chloropla...   335   2e-89
gb|AAM62644.1| Formylmethionine deformylase [Arabidopsis thaliana]    335   2e-89
ref|NP_196970.1| peptide deformylase 1B [Arabidopsis thaliana] g...   335   2e-89
gb|EXC20304.1| Peptide deformylase 1B [Morus notabilis]               324   5e-86

>ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus communis]
            gi|223539350|gb|EEF40941.1| polypeptide deformylase,
            putative [Ricinus communis]
          Length = 282

 Score =  362 bits (929), Expect = 2e-97
 Identities = 179/232 (77%), Positives = 206/232 (88%)
 Frame = -2

Query: 1077 SNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTF 898
            S++ KP   PV AQA+RSFS   KE  +A+ ADL FE PLKIVEYPDPILR KNKR+ TF
Sbjct: 53   SSIAKPPSIPVRAQAKRSFS--FKEEEIATPADLCFEEPLKIVEYPDPILRRKNKRIDTF 110

Query: 897  DESLKKLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIVLVNPRIKRYS 718
            D++LKKLVDEMFDVMY+TDGIGLSAPQVGINV+LMVFNPVGERGEGEEIVL+NPR+ +YS
Sbjct: 111  DDNLKKLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLINPRLNKYS 170

Query: 717  KKIVPFNEGCLSFPGIYADVERPDSLQVDAQDITGARFEVNLTGLPARVFQHEYDHLQGI 538
            KKIVPFNEGCLSFPGIYADV RP+S+++DA+DI GARF VNL+GLPARVFQHEYDHL+GI
Sbjct: 171  KKIVPFNEGCLSFPGIYADVLRPESVKIDARDINGARFTVNLSGLPARVFQHEYDHLEGI 230

Query: 537  LFFDRMSDEVLDSIRDELQALEKKYEERTGLPSPEKIDARRRKKKAVGFGKS 382
            LFFDRM+DEVLDSIR +LQALEKK+E++TG  SPEKI+ R+ KK A GFGKS
Sbjct: 231  LFFDRMTDEVLDSIRAQLQALEKKFEDKTGYASPEKIETRKTKKAAAGFGKS 282


>ref|XP_002276964.1| PREDICTED: peptide deformylase 1B, chloroplastic [Vitis vinifera]
            gi|296087647|emb|CBI34903.3| unnamed protein product
            [Vitis vinifera]
          Length = 275

 Score =  357 bits (917), Expect = 4e-96
 Identities = 183/278 (65%), Positives = 221/278 (79%), Gaps = 2/278 (0%)
 Frame = -2

Query: 1209 MACATCIHSNPFAHXXXXXXXXXXXXLHSP--VRRLLAGAGFHTLSSNLYKPLVRPVIAQ 1036
            MA A+C+HS+  ++              S   + R  + + F + ++    PL++ V  Q
Sbjct: 1    MAFASCLHSSYLSNTFLPILRHRSALSTSTSHLHRFCSPSRFFSSANRFRLPLMQ-VQVQ 59

Query: 1035 ARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTFDESLKKLVDEMFDV 856
            A+R FS   KE  +AS ADL FE PLKIVEYPDPILRAKNK + TFD++LKKLVDEMFDV
Sbjct: 60   AKRGFS--FKEEVIASPADLSFEAPLKIVEYPDPILRAKNKLISTFDDNLKKLVDEMFDV 117

Query: 855  MYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIVLVNPRIKRYSKKIVPFNEGCLSFP 676
            MY+TDGIGLSAPQVGINV+LMVFNPVGERGEGEEIVLVNPR+ +YSKKIV FNEGCLSFP
Sbjct: 118  MYKTDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLVNPRVNKYSKKIVLFNEGCLSFP 177

Query: 675  GIYADVERPDSLQVDAQDITGARFEVNLTGLPARVFQHEYDHLQGILFFDRMSDEVLDSI 496
            GIYADVERP+S+++DA+DITGARF +NL+GLPARVFQHE+DHLQG LFFDRM++EVLDSI
Sbjct: 178  GIYADVERPESVKIDARDITGARFMINLSGLPARVFQHEFDHLQGTLFFDRMTEEVLDSI 237

Query: 495  RDELQALEKKYEERTGLPSPEKIDARRRKKKAVGFGKS 382
               LQ LE+KYE+RTG PSPE+I+ R+R+K A GFGKS
Sbjct: 238  HANLQDLERKYEDRTGFPSPERIETRKRRKVAAGFGKS 275


>ref|XP_006470303.1| PREDICTED: peptide deformylase 1B, chloroplastic-like isoform X1
            [Citrus sinensis] gi|568832146|ref|XP_006470304.1|
            PREDICTED: peptide deformylase 1B, chloroplastic-like
            isoform X2 [Citrus sinensis]
            gi|568832148|ref|XP_006470305.1| PREDICTED: peptide
            deformylase 1B, chloroplastic-like isoform X3 [Citrus
            sinensis]
          Length = 282

 Score =  352 bits (902), Expect = 2e-94
 Identities = 179/278 (64%), Positives = 219/278 (78%), Gaps = 2/278 (0%)
 Frame = -2

Query: 1209 MACATCIHSNPFAHXXXXXXXXXXXXLHSPVR--RLLAGAGFHTLSSNLYKPLVRPVIAQ 1036
            MACAT + S+  +H                +R  RL + A   +  +    PL    + Q
Sbjct: 9    MACATRLCSSSLSHALFPVLINQTAVSTKLLRFNRLYSTARLFSSPNRTNLPL----LTQ 64

Query: 1035 ARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTFDESLKKLVDEMFDV 856
            A+R +    KE  VAS ADL FE PLKIVEYPDPILRAKNKR+ TFD++LKKLVDEMFD 
Sbjct: 65   AKRRYGFSTKEDPVASPADLRFERPLKIVEYPDPILRAKNKRIDTFDDNLKKLVDEMFDF 124

Query: 855  MYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIVLVNPRIKRYSKKIVPFNEGCLSFP 676
            MY+TDGIGLSAPQVGINV+LMVFNPVGERGEGEEIVLVNPR+ +YS K++P+ EGCLSFP
Sbjct: 125  MYKTDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLVNPRVNKYSNKMIPYEEGCLSFP 184

Query: 675  GIYADVERPDSLQVDAQDITGARFEVNLTGLPARVFQHEYDHLQGILFFDRMSDEVLDSI 496
            GI+ADVERP+S+++DA+DI GARF V+L+ LPARVFQHE+DHLQGILFF+RM+D+VLDSI
Sbjct: 185  GIHADVERPESVKIDARDINGARFSVSLSDLPARVFQHEFDHLQGILFFERMTDDVLDSI 244

Query: 495  RDELQALEKKYEERTGLPSPEKIDARRRKKKAVGFGKS 382
            R++L+ALEKKYE++TGL SPEKI+A +R+K AVGFGKS
Sbjct: 245  REQLEALEKKYEDKTGLQSPEKIEASKRRKAAVGFGKS 282


>gb|EOY02424.1| Polypeptide deformylase, putative isoform 1 [Theobroma cacao]
            gi|508710528|gb|EOY02425.1| Polypeptide deformylase,
            putative isoform 1 [Theobroma cacao]
            gi|508710529|gb|EOY02426.1| Polypeptide deformylase,
            putative isoform 1 [Theobroma cacao]
            gi|508710530|gb|EOY02427.1| Polypeptide deformylase,
            putative isoform 1 [Theobroma cacao]
          Length = 278

 Score =  350 bits (899), Expect = 5e-94
 Identities = 171/235 (72%), Positives = 203/235 (86%)
 Frame = -2

Query: 1086 TLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRV 907
            T S N   P + PV AQA+R F  ++K+  VAS  DL F+ PLKIVEYPDPILR +NKR+
Sbjct: 46   TSSLNQTNPQLTPVHAQAKRGF--LSKDDEVASMEDLRFDSPLKIVEYPDPILRKRNKRI 103

Query: 906  KTFDESLKKLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIVLVNPRIK 727
             TFDE+LKKLVDEMFDVMY+TDGIGLSAPQVG+NV+LMVFNPVGERGEG+EIVLVNPR+ 
Sbjct: 104  DTFDENLKKLVDEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGQEIVLVNPRVN 163

Query: 726  RYSKKIVPFNEGCLSFPGIYADVERPDSLQVDAQDITGARFEVNLTGLPARVFQHEYDHL 547
            +YSKK V FNEGCLSFP IYADVERP+S+++DA+D+ GARF VNL+GL AR+FQHE+DHL
Sbjct: 164  KYSKKTVLFNEGCLSFPRIYADVERPESIKIDARDVNGARFTVNLSGLRARIFQHEFDHL 223

Query: 546  QGILFFDRMSDEVLDSIRDELQALEKKYEERTGLPSPEKIDARRRKKKAVGFGKS 382
            QGILFFDRM+ EVLDSIR +L+ALEKKYE+ TGLPSPEK++ ++RKK A GFGKS
Sbjct: 224  QGILFFDRMTGEVLDSIRAQLEALEKKYEDTTGLPSPEKVETQKRKKAAAGFGKS 278


>ref|XP_006446529.1| hypothetical protein CICLE_v10016231mg [Citrus clementina]
            gi|567908433|ref|XP_006446530.1| hypothetical protein
            CICLE_v10016231mg [Citrus clementina]
            gi|567908435|ref|XP_006446531.1| hypothetical protein
            CICLE_v10016231mg [Citrus clementina]
            gi|557549140|gb|ESR59769.1| hypothetical protein
            CICLE_v10016231mg [Citrus clementina]
            gi|557549141|gb|ESR59770.1| hypothetical protein
            CICLE_v10016231mg [Citrus clementina]
            gi|557549142|gb|ESR59771.1| hypothetical protein
            CICLE_v10016231mg [Citrus clementina]
          Length = 274

 Score =  349 bits (895), Expect = 2e-93
 Identities = 166/223 (74%), Positives = 201/223 (90%)
 Frame = -2

Query: 1050 PVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTFDESLKKLVD 871
            P++ QA+R +    KE +VAS ADL FE PLKIVEYPDPILRAKNKR+ TFD +LKKLVD
Sbjct: 52   PLLTQAKRRYGFSTKEDSVASPADLRFERPLKIVEYPDPILRAKNKRIDTFDYNLKKLVD 111

Query: 870  EMFDVMYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIVLVNPRIKRYSKKIVPFNEG 691
            EMFDVMY+TDGIGLSAPQVGINV+LMVFNPVGERGEGEEIVLVNPR+ +YS K++P+ EG
Sbjct: 112  EMFDVMYKTDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLVNPRVNKYSNKMIPYEEG 171

Query: 690  CLSFPGIYADVERPDSLQVDAQDITGARFEVNLTGLPARVFQHEYDHLQGILFFDRMSDE 511
            CLSFPGI+ADVERP+S+++DA+DI GARF V+L+ LPARVFQHE+DHLQGILFF+RM+ +
Sbjct: 172  CLSFPGIHADVERPESVKIDARDINGARFSVSLSDLPARVFQHEFDHLQGILFFERMTGD 231

Query: 510  VLDSIRDELQALEKKYEERTGLPSPEKIDARRRKKKAVGFGKS 382
            VLD I+++L+ALEKKYE++TGL SPEKI+AR+R+K AVGFGKS
Sbjct: 232  VLDGIQEQLEALEKKYEDKTGLQSPEKIEARKRRKAAVGFGKS 274


>gb|EOY02428.1| Polypeptide deformylase, putative isoform 5 [Theobroma cacao]
          Length = 279

 Score =  346 bits (887), Expect = 1e-92
 Identities = 171/236 (72%), Positives = 203/236 (86%), Gaps = 1/236 (0%)
 Frame = -2

Query: 1086 TLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRV 907
            T S N   P + PV AQA+R F  ++K+  VAS  DL F+ PLKIVEYPDPILR +NKR+
Sbjct: 46   TSSLNQTNPQLTPVHAQAKRGF--LSKDDEVASMEDLRFDSPLKIVEYPDPILRKRNKRI 103

Query: 906  KTFDESLKKLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIVLVNPRIK 727
             TFDE+LKKLVDEMFDVMY+TDGIGLSAPQVG+NV+LMVFNPVGERGEG+EIVLVNPR+ 
Sbjct: 104  DTFDENLKKLVDEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGQEIVLVNPRVN 163

Query: 726  RYSKKIVPFNEGCLSFPGIYADVERPDSLQVDAQDITGARFEVNLTGLPARVFQHEYDHL 547
            +YSKK V FNEGCLSFP IYADVERP+S+++DA+D+ GARF VNL+GL AR+FQHE+DHL
Sbjct: 164  KYSKKTVLFNEGCLSFPRIYADVERPESIKIDARDVNGARFTVNLSGLRARIFQHEFDHL 223

Query: 546  -QGILFFDRMSDEVLDSIRDELQALEKKYEERTGLPSPEKIDARRRKKKAVGFGKS 382
             QGILFFDRM+ EVLDSIR +L+ALEKKYE+ TGLPSPEK++ ++RKK A GFGKS
Sbjct: 224  QQGILFFDRMTGEVLDSIRAQLEALEKKYEDTTGLPSPEKVETQKRKKAAAGFGKS 279


>gb|EMJ17002.1| hypothetical protein PRUPE_ppa009947mg [Prunus persica]
          Length = 271

 Score =  346 bits (887), Expect = 1e-92
 Identities = 171/223 (76%), Positives = 197/223 (88%)
 Frame = -2

Query: 1050 PVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTFDESLKKLVD 871
            PV AQA+R FS   KE  VA+AAD+ FE PLKIVEYPDPILRAKNKR+ +FDE+LK LVD
Sbjct: 51   PVHAQAKRGFS--VKEDEVATAADVEFETPLKIVEYPDPILRAKNKRIDSFDENLKILVD 108

Query: 870  EMFDVMYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIVLVNPRIKRYSKKIVPFNEG 691
            EMFD+MY+TDGIGLSAPQVGINV+LMVFNPVGERGEGEEIVLVNPR+ RYS+K  PFNEG
Sbjct: 109  EMFDIMYKTDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLVNPRVSRYSQKTRPFNEG 168

Query: 690  CLSFPGIYADVERPDSLQVDAQDITGARFEVNLTGLPARVFQHEYDHLQGILFFDRMSDE 511
            CLSFPGIYADV RP+S+++DA+DI GARF VNL+GLPARVFQHE+DHLQGILFFDRMS+ 
Sbjct: 169  CLSFPGIYADVVRPESVKIDARDINGARFTVNLSGLPARVFQHEFDHLQGILFFDRMSEG 228

Query: 510  VLDSIRDELQALEKKYEERTGLPSPEKIDARRRKKKAVGFGKS 382
            VL++I  +LQ LEKKYE++TGLPSPE+I  R+R K A GFGKS
Sbjct: 229  VLETICAQLQTLEKKYEDKTGLPSPERIQTRKRMKAATGFGKS 271


>ref|XP_004306350.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Fragaria vesca
            subsp. vesca]
          Length = 275

 Score =  343 bits (880), Expect = 9e-92
 Identities = 180/254 (70%), Positives = 213/254 (83%), Gaps = 9/254 (3%)
 Frame = -2

Query: 1116 RRLLAGAGFHTLS--SNLYKPL-----VRPVIAQARRSFSPMAKEAAVASAADLLFEGPL 958
            RR L  A FH     S+  +PL        V AQA+R FS   KE  VASAAD+ FE PL
Sbjct: 24   RRPLFPAIFHRFCTFSSADRPLSTANRFTAVRAQAKRGFS--LKEDQVASAADVEFETPL 81

Query: 957  KIVEYPDPILRAKNKRVKTFDESLKKLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPV 778
            +IVEYPDPILRAKNKR+ TFD++LKKLV+EMFD+MYRTDGIGLSAPQVGINV+LMVFNPV
Sbjct: 82   EIVEYPDPILRAKNKRLDTFDDNLKKLVEEMFDIMYRTDGIGLSAPQVGINVQLMVFNPV 141

Query: 777  GERGEGEEIVLVNPRIKRYSKKIVPFNEGCLSFPGIYADVERPDSLQVDAQDITGARFEV 598
            GERGEGEEIVLVNPR+ RYS+K   FNEGCLSFPGIYADV+RP+S+++DA+DI+GARF V
Sbjct: 142  GERGEGEEIVLVNPRVSRYSQKTRLFNEGCLSFPGIYADVQRPESVKIDARDISGARFTV 201

Query: 597  NLTGLPARVFQHEYDHLQGILFFDRMSDEVLDSIRDELQALEKKYEERTGLPSPEKIDAR 418
            NL+GLPARVFQHE+DHLQGILFFDRM++ VL+SI ++LQALEKKYE++TGLPSPE+I++R
Sbjct: 202  NLSGLPARVFQHEFDHLQGILFFDRMTEGVLESISEQLQALEKKYEDKTGLPSPERIESR 261

Query: 417  RRK--KKAVGFGKS 382
            +R   K A GFGKS
Sbjct: 262  KRMKLKAAAGFGKS 275


>ref|XP_006288433.1| hypothetical protein CARUB_v10001691mg [Capsella rubella]
            gi|482557139|gb|EOA21331.1| hypothetical protein
            CARUB_v10001691mg [Capsella rubella]
          Length = 273

 Score =  343 bits (879), Expect = 1e-91
 Identities = 167/242 (69%), Positives = 202/242 (83%)
 Frame = -2

Query: 1110 LLAGAGFHTLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPI 931
            LL   G  + + N   PL  PV A  +R      KE  VASA+DL FE PLKIVEYPDPI
Sbjct: 34   LLKSTGMFSSAVNRSTPLTSPVRAAVKRV---PRKEDEVASASDLEFETPLKIVEYPDPI 90

Query: 930  LRAKNKRVKTFDESLKKLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEI 751
            LRAKNKR+  FDE+LK LVD MFD+MY+TDGIGLSAPQVG+NV+LMVFNP GE GEGEEI
Sbjct: 91   LRAKNKRIGVFDENLKNLVDAMFDIMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGEEI 150

Query: 750  VLVNPRIKRYSKKIVPFNEGCLSFPGIYADVERPDSLQVDAQDITGARFEVNLTGLPARV 571
            VLVNP+I +YS K+VPF+EGCLSFPGIYA+V RP S+++DA+DITGA+F ++L+ LPAR+
Sbjct: 151  VLVNPKINKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGAKFSISLSRLPARI 210

Query: 570  FQHEYDHLQGILFFDRMSDEVLDSIRDELQALEKKYEERTGLPSPEKIDARRRKKKAVGF 391
            FQHEYDHL+G+LFFDRM+DEVLDSIR+EL+ALEKKYEE+TGLPSPE++ AR+++K  VGF
Sbjct: 211  FQHEYDHLEGVLFFDRMTDEVLDSIREELEALEKKYEEKTGLPSPERVQARQKRKAGVGF 270

Query: 390  GK 385
            GK
Sbjct: 271  GK 272


>ref|XP_006338575.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Solanum
            tuberosum]
          Length = 279

 Score =  342 bits (877), Expect = 2e-91
 Identities = 170/237 (71%), Positives = 199/237 (83%)
 Frame = -2

Query: 1092 FHTLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNK 913
            F + SSN  KP    V AQARR  S   K   +A+ ADL FE PLKIVEYPDPILRAKNK
Sbjct: 45   FFSASSN--KPPKLAVYAQARRVLSSKTKGDEIATPADLSFEVPLKIVEYPDPILRAKNK 102

Query: 912  RVKTFDESLKKLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIVLVNPR 733
            R+  FD +LKKLVDEMFD+MY+TDGIGLSAPQVG+NV+LMVFN  GERGEGEEIVLVNPR
Sbjct: 103  RIGKFDANLKKLVDEMFDIMYKTDGIGLSAPQVGMNVQLMVFNAAGERGEGEEIVLVNPR 162

Query: 732  IKRYSKKIVPFNEGCLSFPGIYADVERPDSLQVDAQDITGARFEVNLTGLPARVFQHEYD 553
            + RYS++I+P+ EGCLSFP I+ DVERPDS++V AQDI GARFE++L+ LPARVFQHE+D
Sbjct: 163  VSRYSRRIIPYEEGCLSFPMIHGDVERPDSVKVGAQDINGARFEISLSALPARVFQHEFD 222

Query: 552  HLQGILFFDRMSDEVLDSIRDELQALEKKYEERTGLPSPEKIDARRRKKKAVGFGKS 382
            HLQG+LFFD+M+DEVLD+IR+ L ALEKKYEERTGLP+PE I+ R+ KK AVGFGKS
Sbjct: 223  HLQGVLFFDKMTDEVLDTIRETLVALEKKYEERTGLPTPESINTRKTKKAAVGFGKS 279


>ref|XP_002300047.2| hypothetical protein POPTR_0001s35190g [Populus trichocarpa]
            gi|566152890|ref|XP_006369926.1| hypothetical protein
            POPTR_0001s35190g [Populus trichocarpa]
            gi|566152892|ref|XP_006369927.1| hypothetical protein
            POPTR_0001s35190g [Populus trichocarpa]
            gi|550348928|gb|EEE84852.2| hypothetical protein
            POPTR_0001s35190g [Populus trichocarpa]
            gi|550348929|gb|ERP66495.1| hypothetical protein
            POPTR_0001s35190g [Populus trichocarpa]
            gi|550348930|gb|ERP66496.1| hypothetical protein
            POPTR_0001s35190g [Populus trichocarpa]
          Length = 268

 Score =  341 bits (874), Expect = 4e-91
 Identities = 167/248 (67%), Positives = 200/248 (80%)
 Frame = -2

Query: 1128 HSPVRRLLAGAGFHTLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIV 949
            HS  + L         SS + +P    +  +++    P  K+  VA+ +DL FE PLKIV
Sbjct: 20   HSRTQTLCEPIRLARFSSTMKQPRPPSLFVRSQAKRGPFLKQDQVAATSDLEFEAPLKIV 79

Query: 948  EYPDPILRAKNKRVKTFDESLKKLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPVGER 769
            EYPDPILRAKNKR+ +FD++LKKLVDEMFDVMY+TDGIGLSAPQVGINV+LMVFNP  E 
Sbjct: 80   EYPDPILRAKNKRIDSFDDNLKKLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNPADEH 139

Query: 768  GEGEEIVLVNPRIKRYSKKIVPFNEGCLSFPGIYADVERPDSLQVDAQDITGARFEVNLT 589
            GEG+EIVLVNPR+ +YSKK V FNEGCLSFPGIYADV+RP+S+++DA+DI GARF VNL+
Sbjct: 140  GEGDEIVLVNPRVNKYSKKTVLFNEGCLSFPGIYADVKRPESVKIDARDINGARFTVNLS 199

Query: 588  GLPARVFQHEYDHLQGILFFDRMSDEVLDSIRDELQALEKKYEERTGLPSPEKIDARRRK 409
            GLPARVFQHE+DHLQGILFFDRM++EVLDSIR  LQALEKKYE++TG PSPE+I+  R K
Sbjct: 200  GLPARVFQHEFDHLQGILFFDRMTEEVLDSIRPGLQALEKKYEDKTGFPSPERIETHRLK 259

Query: 408  KKAVGFGK 385
            K A GFGK
Sbjct: 260  KVAAGFGK 267


>ref|XP_006399979.1| hypothetical protein EUTSA_v10014367mg [Eutrema salsugineum]
            gi|557101069|gb|ESQ41432.1| hypothetical protein
            EUTSA_v10014367mg [Eutrema salsugineum]
          Length = 273

 Score =  339 bits (870), Expect = 1e-90
 Identities = 164/241 (68%), Positives = 200/241 (82%)
 Frame = -2

Query: 1107 LAGAGFHTLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPIL 928
            L G    + + N   PL  PV A+ +R      K+  VAS +DL FE PLKIVEYPDPIL
Sbjct: 35   LKGTVMFSSAVNRIGPLTSPVRAEVKRL---SRKDDEVASVSDLQFETPLKIVEYPDPIL 91

Query: 927  RAKNKRVKTFDESLKKLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIV 748
            RAKNKR+  FDE+LK LVD MF VMY+TDG+GLSAPQVG+NV+LMVFNP GERGEGEEIV
Sbjct: 92   RAKNKRIGVFDENLKNLVDAMFHVMYKTDGVGLSAPQVGLNVQLMVFNPAGERGEGEEIV 151

Query: 747  LVNPRIKRYSKKIVPFNEGCLSFPGIYADVERPDSLQVDAQDITGARFEVNLTGLPARVF 568
            LVNP+I +YS K+VPF+EGCLSFPGIYADV RP S+++DA+DITGARF ++L+ LPAR+F
Sbjct: 152  LVNPKINKYSDKLVPFSEGCLSFPGIYADVVRPQSVKIDARDITGARFSISLSRLPARIF 211

Query: 567  QHEYDHLQGILFFDRMSDEVLDSIRDELQALEKKYEERTGLPSPEKIDARRRKKKAVGFG 388
            QHEYDHL+G+LFFD+M+D+VLDSIR+EL+ALEKKYEE+TGLPSPE++  RR++K  VGFG
Sbjct: 212  QHEYDHLEGVLFFDKMTDQVLDSIREELEALEKKYEEKTGLPSPERVQERRKRKAGVGFG 271

Query: 387  K 385
            K
Sbjct: 272  K 272


>ref|XP_002873683.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297319520|gb|EFH49942.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 273

 Score =  338 bits (868), Expect = 2e-90
 Identities = 163/232 (70%), Positives = 198/232 (85%)
 Frame = -2

Query: 1080 SSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKT 901
            + N   PL+ PV A+ +R      K+  VASA+DL FE PL+IVEYPDPILRAKNKR+  
Sbjct: 44   TGNRTSPLISPVRAEVKRV---SRKDVEVASASDLQFETPLRIVEYPDPILRAKNKRIGV 100

Query: 900  FDESLKKLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIVLVNPRIKRY 721
            FD++LK LVD MFDVMY+TDGIGLSAPQVG+NV+LMVFNP GE GEGEEIVLVNP IK+Y
Sbjct: 101  FDQNLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGEEIVLVNPIIKKY 160

Query: 720  SKKIVPFNEGCLSFPGIYADVERPDSLQVDAQDITGARFEVNLTGLPARVFQHEYDHLQG 541
            S K+VPF+EGCLSFPGIYA+V RP S+++DA+DITG RF ++L+ LPAR+FQHEYDHL+G
Sbjct: 161  SDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEG 220

Query: 540  ILFFDRMSDEVLDSIRDELQALEKKYEERTGLPSPEKIDARRRKKKAVGFGK 385
            +LFFDRM+D+VLDSIR+EL+ALEKKYEE+TGLPSPE+I AR ++K  VGFGK
Sbjct: 221  VLFFDRMTDQVLDSIREELEALEKKYEEKTGLPSPERIQARHKRKAGVGFGK 272


>ref|NP_001234441.1| peptide deformylase 1B, chloroplastic [Solanum lycopersicum]
            gi|17433052|sp|Q9FV54.1|DEF1B_SOLLC RecName: Full=Peptide
            deformylase 1B, chloroplastic; Short=PDF 1B; AltName:
            Full=Polypeptide deformylase; Flags: Precursor
            gi|11320950|gb|AAG33972.1| peptide deformylase-like
            protein [Solanum lycopersicum]
          Length = 279

 Score =  337 bits (864), Expect = 6e-90
 Identities = 166/237 (70%), Positives = 199/237 (83%)
 Frame = -2

Query: 1092 FHTLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNK 913
            F + SSN  KP    V AQARR  S   K   +A+ ADL F  PLKIVEYPDPILRAKNK
Sbjct: 45   FFSASSN--KPPKLAVYAQARRVLSSKTKGDEIATPADLSFVVPLKIVEYPDPILRAKNK 102

Query: 912  RVKTFDESLKKLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIVLVNPR 733
            R+  FD +LKKLVDEMFD+MY+TDGIGLSAPQVG+NV+LMVFN  GERGEGEEIVLVNPR
Sbjct: 103  RIDNFDANLKKLVDEMFDIMYKTDGIGLSAPQVGMNVQLMVFNAAGERGEGEEIVLVNPR 162

Query: 732  IKRYSKKIVPFNEGCLSFPGIYADVERPDSLQVDAQDITGARFEVNLTGLPARVFQHEYD 553
            + RYS++I+P+ EGCLSFP I+ DV+RP+S++VDAQDI G RFE++L+ LPARVFQHE+D
Sbjct: 163  VSRYSRRIIPYEEGCLSFPMIHGDVKRPESVKVDAQDINGTRFEISLSALPARVFQHEFD 222

Query: 552  HLQGILFFDRMSDEVLDSIRDELQALEKKYEERTGLPSPEKIDARRRKKKAVGFGKS 382
            HLQG+LFFD+M+DEVLD+IR++L ALEKKYE+RTGLP+PE I+ R+ KK AVGFGKS
Sbjct: 223  HLQGVLFFDKMTDEVLDTIREKLVALEKKYEDRTGLPTPESINTRKIKKAAVGFGKS 279


>ref|XP_006369928.1| hypothetical protein POPTR_0001s35190g [Populus trichocarpa]
            gi|550348931|gb|ERP66497.1| hypothetical protein
            POPTR_0001s35190g [Populus trichocarpa]
          Length = 269

 Score =  336 bits (861), Expect = 1e-89
 Identities = 167/249 (67%), Positives = 199/249 (79%), Gaps = 1/249 (0%)
 Frame = -2

Query: 1128 HSPVRRLLAGAGFHTLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAA-DLLFEGPLKI 952
            HS  + L         SS + +P    +  +++    P  K+  VA+   DL FE PLKI
Sbjct: 20   HSRTQTLCEPIRLARFSSTMKQPRPPSLFVRSQAKRGPFLKQDQVAATTGDLEFEAPLKI 79

Query: 951  VEYPDPILRAKNKRVKTFDESLKKLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPVGE 772
            VEYPDPILRAKNKR+ +FD++LKKLVDEMFDVMY+TDGIGLSAPQVGINV+LMVFNP  E
Sbjct: 80   VEYPDPILRAKNKRIDSFDDNLKKLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNPADE 139

Query: 771  RGEGEEIVLVNPRIKRYSKKIVPFNEGCLSFPGIYADVERPDSLQVDAQDITGARFEVNL 592
             GEG+EIVLVNPR+ +YSKK V FNEGCLSFPGIYADV+RP+S+++DA+DI GARF VNL
Sbjct: 140  HGEGDEIVLVNPRVNKYSKKTVLFNEGCLSFPGIYADVKRPESVKIDARDINGARFTVNL 199

Query: 591  TGLPARVFQHEYDHLQGILFFDRMSDEVLDSIRDELQALEKKYEERTGLPSPEKIDARRR 412
            +GLPARVFQHE+DHLQGILFFDRM++EVLDSIR  LQALEKKYE++TG PSPE+I+  R 
Sbjct: 200  SGLPARVFQHEFDHLQGILFFDRMTEEVLDSIRPGLQALEKKYEDKTGFPSPERIETHRL 259

Query: 411  KKKAVGFGK 385
            KK A GFGK
Sbjct: 260  KKVAAGFGK 268


>gb|AAG33980.1|AF269165_1 peptide deformylase [Arabidopsis thaliana]
          Length = 273

 Score =  336 bits (861), Expect = 1e-89
 Identities = 161/230 (70%), Positives = 197/230 (85%)
 Frame = -2

Query: 1074 NLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTFD 895
            N   PL   V A+ +R      K+  VASA D+ FE PLKIVEYPDPILRAKNKR+  FD
Sbjct: 46   NRTSPLTSSVRAEVKRV---SRKDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFD 102

Query: 894  ESLKKLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIVLVNPRIKRYSK 715
            E+LK LVD MFDVMY+TDGIGLSAPQVG+NV+LMVFNP GE GEG+EIVLVNP+IK+YS 
Sbjct: 103  ENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSD 162

Query: 714  KIVPFNEGCLSFPGIYADVERPDSLQVDAQDITGARFEVNLTGLPARVFQHEYDHLQGIL 535
            K+VPF+EGCLSFPGIYA+V RP S+++DA+DITG RF ++L+ LPAR+FQHEYDHL+G+L
Sbjct: 163  KLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFSISLSSLPARIFQHEYDHLEGVL 222

Query: 534  FFDRMSDEVLDSIRDELQALEKKYEERTGLPSPEKIDARRRKKKAVGFGK 385
            FFDRM+D+VLDSIR+EL+ALEKKYEE+TGLPSPE+++AR+++K  VGFGK
Sbjct: 223  FFDRMTDQVLDSIREELEALEKKYEEKTGLPSPERVEARQKRKAGVGFGK 272


>ref|XP_004158319.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Cucumis
            sativus]
          Length = 273

 Score =  335 bits (860), Expect = 2e-89
 Identities = 172/232 (74%), Positives = 200/232 (86%)
 Frame = -2

Query: 1077 SNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTF 898
            S+ +K     V AQA+R FS  AKE  VAS+ DL FE PLKIVEYPDPILRAKNKR+ +F
Sbjct: 45   SSKFKAPSTLVYAQAKRGFS--AKEDDVASSVDLEFEAPLKIVEYPDPILRAKNKRIGSF 102

Query: 897  DESLKKLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIVLVNPRIKRYS 718
            D++LKKLV EMFDVMY+TDGIGLSAPQVG+NV+LMVFN VGERGEGEEIVLVNP++ RYS
Sbjct: 103  DDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNSVGERGEGEEIVLVNPKVYRYS 162

Query: 717  KKIVPFNEGCLSFPGIYADVERPDSLQVDAQDITGARFEVNLTGLPARVFQHEYDHLQGI 538
            KK V FNEGCLSFP IYADVERP+S+++DA+DI+G RF VNL+GL ARVFQHE+DHLQG 
Sbjct: 163  KKTVLFNEGCLSFPMIYADVERPESIKIDARDISGTRFMVNLSGLSARVFQHEFDHLQGT 222

Query: 537  LFFDRMSDEVLDSIRDELQALEKKYEERTGLPSPEKIDARRRKKKAVGFGKS 382
            LFFDRM+DEVL++IR +LQALEKKYE+RTGLPSPE+I+  RRK  A GFGKS
Sbjct: 223  LFFDRMTDEVLETIRPQLQALEKKYEDRTGLPSPERIENFRRKVGA-GFGKS 273


>gb|AAM62644.1| Formylmethionine deformylase [Arabidopsis thaliana]
          Length = 273

 Score =  335 bits (859), Expect = 2e-89
 Identities = 161/230 (70%), Positives = 197/230 (85%)
 Frame = -2

Query: 1074 NLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTFD 895
            N   PL   V A+ +R      K+  VASA D+ FE PLKIVEYPDPILRAKNKR+  FD
Sbjct: 46   NRNSPLTSSVRAEVKRV---SRKDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFD 102

Query: 894  ESLKKLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIVLVNPRIKRYSK 715
            E+LK LVD MFDVMY+TDGIGLSAPQVG+NV+LMVFNP GE GEG+EIVLVNP+IK+YS 
Sbjct: 103  ENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSD 162

Query: 714  KIVPFNEGCLSFPGIYADVERPDSLQVDAQDITGARFEVNLTGLPARVFQHEYDHLQGIL 535
            K+VPF+EGCLSFPGIYA+V RP S+++DA+DITG RF ++L+ LPAR+FQHEYDHL+G+L
Sbjct: 163  KLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVL 222

Query: 534  FFDRMSDEVLDSIRDELQALEKKYEERTGLPSPEKIDARRRKKKAVGFGK 385
            FFDRM+D+VLDSIR+EL+ALEKKYEE+TGLPSPE+++AR+++K  VGFGK
Sbjct: 223  FFDRMTDQVLDSIREELEALEKKYEEKTGLPSPERVEARQKRKAGVGFGK 272


>ref|NP_196970.1| peptide deformylase 1B [Arabidopsis thaliana]
            gi|30684999|ref|NP_850821.1| peptide deformylase 1B
            [Arabidopsis thaliana]
            gi|39932734|sp|Q9FUZ2.2|DEF1B_ARATH RecName: Full=Peptide
            deformylase 1B, chloroplastic/mitochondrial;
            Short=AtDEF2; Short=AtPDF1B; Short=PDF 1B; AltName:
            Full=Polypeptide deformylase; Flags: Precursor
            gi|7573315|emb|CAB87633.1| putative protein [Arabidopsis
            thaliana] gi|15292891|gb|AAK92816.1| unknown protein
            [Arabidopsis thaliana] gi|20465677|gb|AAM20307.1| unknown
            protein [Arabidopsis thaliana]
            gi|332004676|gb|AED92059.1| peptide deformylase 1B
            [Arabidopsis thaliana] gi|332004677|gb|AED92060.1|
            peptide deformylase 1B [Arabidopsis thaliana]
          Length = 273

 Score =  335 bits (859), Expect = 2e-89
 Identities = 161/230 (70%), Positives = 197/230 (85%)
 Frame = -2

Query: 1074 NLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTFD 895
            N   PL   V A+ +R      K+  VASA D+ FE PLKIVEYPDPILRAKNKR+  FD
Sbjct: 46   NRTSPLTSSVRAEVKRV---SRKDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFD 102

Query: 894  ESLKKLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIVLVNPRIKRYSK 715
            E+LK LVD MFDVMY+TDGIGLSAPQVG+NV+LMVFNP GE GEG+EIVLVNP+IK+YS 
Sbjct: 103  ENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSD 162

Query: 714  KIVPFNEGCLSFPGIYADVERPDSLQVDAQDITGARFEVNLTGLPARVFQHEYDHLQGIL 535
            K+VPF+EGCLSFPGIYA+V RP S+++DA+DITG RF ++L+ LPAR+FQHEYDHL+G+L
Sbjct: 163  KLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVL 222

Query: 534  FFDRMSDEVLDSIRDELQALEKKYEERTGLPSPEKIDARRRKKKAVGFGK 385
            FFDRM+D+VLDSIR+EL+ALEKKYEE+TGLPSPE+++AR+++K  VGFGK
Sbjct: 223  FFDRMTDQVLDSIREELEALEKKYEEKTGLPSPERVEARQKRKAGVGFGK 272


>gb|EXC20304.1| Peptide deformylase 1B [Morus notabilis]
          Length = 266

 Score =  324 bits (830), Expect = 5e-86
 Identities = 172/264 (65%), Positives = 200/264 (75%), Gaps = 37/264 (14%)
 Frame = -2

Query: 1062 PLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTFDESLK 883
            PLV PV+AQARR  S   KE  VAS ADL FE PLKIV YPDPILRAKNKR+ +FD++LK
Sbjct: 5    PLV-PVVAQARRGSS--LKEDEVASPADLQFEPPLKIVVYPDPILRAKNKRIDSFDDNLK 61

Query: 882  KLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIVLVNPRIKRYSKKIVP 703
            KLV EMFDVMY+TDGIGLSAPQVG+NV+LMV NP GERG GEEIVLVNPR+ RYSKK+V 
Sbjct: 62   KLVHEMFDVMYKTDGIGLSAPQVGMNVQLMVLNPAGERGVGEEIVLVNPRVSRYSKKMVL 121

Query: 702  FNEGCLSFPGIYADVERPDSLQVDAQDITGARFEVNLTGLPARVFQHEYDH--------- 550
            FNEGCLSFPGIYADV+RP+S+++DA+D+ GARF VNL+GLPARVFQHE+DH         
Sbjct: 122  FNEGCLSFPGIYADVQRPESVKIDARDVNGARFTVNLSGLPARVFQHEFDHLQVSIQHFL 181

Query: 549  ---------------------------LQGILFFDRMSDEVLDSIRDELQALEKKYEERT 451
                                       LQG+LFFDRM++ VLD IR +LQ+LEKKYE++T
Sbjct: 182  IQYIIAFLMKNYPLYFISSFIFLWQPCLQGVLFFDRMTEGVLDGIRAQLQSLEKKYEDKT 241

Query: 450  GLPSPEKIDARRRKKK-AVGFGKS 382
            G PSPE+ID  R+KKK AVGFGKS
Sbjct: 242  GFPSPERIDETRKKKKVAVGFGKS 265