BLASTX nr result

ID: Rehmannia25_contig00010225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00010225
         (555 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY08413.1| Gb:AAF02129.1 isoform 1 [Theobroma cacao] gi|5087...    59   8e-07
emb|CAN79170.1| hypothetical protein VITISV_012166 [Vitis vinifera]    58   2e-06
ref|XP_002530166.1| conserved hypothetical protein [Ricinus comm...    57   2e-06
ref|XP_002323401.2| hypothetical protein POPTR_0016s07430g [Popu...    56   5e-06

>gb|EOY08413.1| Gb:AAF02129.1 isoform 1 [Theobroma cacao]
           gi|508716517|gb|EOY08414.1| Gb:AAF02129.1 isoform 1
           [Theobroma cacao]
          Length = 113

 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 30/35 (85%), Positives = 33/35 (94%)
 Frame = +2

Query: 449 MSRRNGPKLDLKLNLSPPRRSHPRVESPSRSSTVS 553
           MSRRNGPKL+LKLNLSPP R +PRVESPSRS+TVS
Sbjct: 1   MSRRNGPKLELKLNLSPP-RLNPRVESPSRSATVS 34


>emb|CAN79170.1| hypothetical protein VITISV_012166 [Vitis vinifera]
          Length = 281

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 34/63 (53%), Positives = 41/63 (65%), Gaps = 5/63 (7%)
 Frame = +2

Query: 380 PPPSEKPY-----TLPNRN*LIIGKQKKMSRRNGPKLDLKLNLSPPRRSHPRVESPSRSS 544
           PPP   P+      LP      +G   +MSRRNGPKLDLKLNLSPP R++   ESPSRS+
Sbjct: 135 PPPPALPFGWERHPLPQGK-RYLGDATRMSRRNGPKLDLKLNLSPP-RANRHAESPSRSA 192

Query: 545 TVS 553
           T+S
Sbjct: 193 TLS 195


>ref|XP_002530166.1| conserved hypothetical protein [Ricinus communis]
           gi|223530327|gb|EEF32221.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 195

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 31/41 (75%), Positives = 36/41 (87%), Gaps = 2/41 (4%)
 Frame = +2

Query: 437 KQKKMSRRNG--PKLDLKLNLSPPRRSHPRVESPSRSSTVS 553
           ++K MSRRNG  PKLDLKLNLSPP R+ PRVESP+RS+TVS
Sbjct: 83  RKKTMSRRNGNGPKLDLKLNLSPP-RADPRVESPNRSATVS 122


>ref|XP_002323401.2| hypothetical protein POPTR_0016s07430g [Populus trichocarpa]
           gi|550321046|gb|EEF05162.2| hypothetical protein
           POPTR_0016s07430g [Populus trichocarpa]
          Length = 144

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 31/41 (75%), Positives = 34/41 (82%), Gaps = 2/41 (4%)
 Frame = +2

Query: 437 KQKKMSRRNG--PKLDLKLNLSPPRRSHPRVESPSRSSTVS 553
           K  +MSRRNG  PKLDLKLNLSPP R +PRVESP RS+TVS
Sbjct: 26  KTSRMSRRNGSLPKLDLKLNLSPP-RVNPRVESPGRSATVS 65


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