BLASTX nr result
ID: Rehmannia25_contig00009651
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00009651
(643 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 148 1e-33
gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidop... 135 1e-29
dbj|BAB02145.1| copia-like retroelement pol polyprotein-like [Ar... 126 5e-27
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 126 6e-27
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 124 2e-26
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 124 2e-26
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 124 2e-26
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 123 4e-26
emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera] 123 5e-26
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja... 122 7e-26
gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subc... 122 7e-26
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 122 9e-26
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 119 6e-25
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 119 6e-25
emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group] 119 6e-25
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 119 6e-25
emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group] 119 6e-25
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 118 1e-24
emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera] 117 4e-24
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 116 5e-24
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 148 bits (374), Expect = 1e-33
Identities = 83/211 (39%), Positives = 117/211 (55%)
Frame = +2
Query: 8 KCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 187
K P+ ++GK D+ +LKVFGC A+VH K DKLEPR+ KC+FLGYP+GVKGY+LW+ +
Sbjct: 601 KTPQEKWTGKAADYQHLKVFGCTAYVHTKTDKLEPRAVKCIFLGYPKGVKGYKLWIETQG 660
Query: 188 GFKAITSRDVIFNESDFPCLSVTVSLPESEPAPNKVEQLPGLSHLGESENLHDETVNETD 367
K I SRDV FNE D + + PA + VE L L E E L E ET
Sbjct: 661 KGKCIISRDVTFNEQD---------MSKQTPAKD-VEGLDQLQFEVEHETLQPEKSKETS 710
Query: 368 LPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRTRRNTRQPLKFDDFHMTSYA 547
+E + E +N P L Y L RDR +R + P ++ MT++A
Sbjct: 711 SKTAQEEIVH----------ERQNEP-TQGLESYNLVRDRQKRQVKPPKRYGQAEMTAFA 759
Query: 548 FSMFESIDNFEPKSYEDALKSANSVEWLNAM 640
S+ E I + EPK+Y++A+ S + +W+ A+
Sbjct: 760 LSVAEEIVDMEPKTYQEAINSNEADQWVKAI 790
>gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1166
Score = 135 bits (340), Expect = 1e-29
Identities = 86/230 (37%), Positives = 128/230 (55%), Gaps = 19/230 (8%)
Frame = +2
Query: 8 KCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 187
K PE V++G + D S+L+ FGC+A+VH DK PR+ K VF+GYP G+KGYR+WL E
Sbjct: 532 KLPEEVWTGTKPDLSHLRRFGCSAYVHVTQDKTSPRAVKGVFMGYPCGIKGYRVWLPKEG 591
Query: 188 GFKAITSRDVIFNESDFPCLSVTVSLPESEPAPNKVEQLP------GLSH---------- 319
K TSR+V+FNE++ +++ + E A + ++L SH
Sbjct: 592 --KCTTSRNVVFNETELYKDTLSSADERKEEAEKEYKKLKKARKRVSFSHDLLRGPSTSC 649
Query: 320 --LGESENLHDETVNETDLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRTR 493
L +S + ET + + + N E + +++E V + EN +L DY LARD R
Sbjct: 650 CDLDDSSSQGGETSSSSSESSENLEESEMNEEVVGS----EN---EQSLDDYLLARDMKR 702
Query: 494 R-NTRQPLKFDDFHMTSYAFSMFESIDNFEPKSYEDALKSANSVEWLNAM 640
R N R P +F+D +YA + E ++ EPKSYE+ALKS+ +W NAM
Sbjct: 703 RSNIRPPSRFEDEDFVAYALATAEDLEEEEPKSYEEALKSSKRKQWENAM 752
>dbj|BAB02145.1| copia-like retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 348
Score = 126 bits (317), Expect = 5e-27
Identities = 78/212 (36%), Positives = 116/212 (54%), Gaps = 1/212 (0%)
Frame = +2
Query: 8 KCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 187
K PE V++G + D S+L+ F C+A+VH DK PR+ K VF+GYP G+KGYR+WL E
Sbjct: 33 KLPEEVWAGTKPDLSHLRRFECSAYVHVTQDKTSPRAVKGVFMGYPFGIKGYRVWLPEEG 92
Query: 188 GFKAITSRDVIFNESDFPCLSVTVSLPESEPAPNKVEQLPGLSHLGESENLHDETVNETD 367
K TSR+V+FNE + T+S P+ +E +S + ET + +
Sbjct: 93 --KCTTSRNVVFNEIEL--YKGTLSSPDGRTDYYDLE---------DSSSQGGETSSSSS 139
Query: 368 LPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRTRR-NTRQPLKFDDFHMTSY 544
+ N E + ++ EV+ +L DY LAR+R RR N R P +F D +Y
Sbjct: 140 ESSENLEESETNE-------EVDGSENEQSLDDYLLARERKRRSNIRPPSRFKDGDFVAY 192
Query: 545 AFSMFESIDNFEPKSYEDALKSANSVEWLNAM 640
A + E ++ EPKSYE+A+K + +W +AM
Sbjct: 193 ALATEEDLEIEEPKSYEEAMKRSKRKQWESAM 224
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 126 bits (316), Expect = 6e-27
Identities = 80/216 (37%), Positives = 123/216 (56%), Gaps = 4/216 (1%)
Frame = +2
Query: 8 KCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 187
K P V+SG D+S LKVFGC A+ H KLEPR+ KC+FLGY GVKGY+LW E
Sbjct: 637 KTPIEVWSGTPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLW-NPET 695
Query: 188 GFKAITSRDVIFNESDFPCLSVTVSLPESEPAPNKVEQLPGL--SHLGESENLHDETVNE 361
G K SR V+FNES + T SLP SE P K Q + H+ + + E V+E
Sbjct: 696 G-KTFMSRSVVFNES----VMFTNSLP-SEHVPEKELQRMHMQVEHVDDDTGVQVEPVDE 749
Query: 362 TDLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRTRRNTRQPLK-FDDFHMT 538
D + + + HD+ V+ P + + E D +A+ +++R T+ P + ++ +++
Sbjct: 750 QDDHNNDVADDDAHDD-VQQTPPILQLEE-----DLSIAQRKSKRTTKPPKRLIEECNLS 803
Query: 539 SYAFSMFESIDN-FEPKSYEDALKSANSVEWLNAMN 643
YA S E ++N EP +Y++A++ +S W++AM+
Sbjct: 804 YYALSCAEQVENVHEPATYKEAVRCGDSENWISAMH 839
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 124 bits (311), Expect = 2e-26
Identities = 79/216 (36%), Positives = 123/216 (56%), Gaps = 4/216 (1%)
Frame = +2
Query: 8 KCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 187
K P V+SG D+S LKVFGC A+ H KLEPR+ KC+FLGY GVKGY+LW E
Sbjct: 635 KTPIEVWSGMPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLW-NPET 693
Query: 188 GFKAITSRDVIFNESDFPCLSVTVSLPESEPAPNKVEQLPGL--SHLGESENLHDETVNE 361
G K SR V+FNES + T SLP SE P K Q + H+ + + E V+E
Sbjct: 694 G-KTFMSRSVVFNES----VMFTNSLP-SEHVPEKELQRMHMQVEHVDDDTGVQVEPVHE 747
Query: 362 TDLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRTRRNTRQPLK-FDDFHMT 538
D + + + HD+ V+ P + + E + +A+ +++R T+ P + ++ +++
Sbjct: 748 QDDHNNDVADDDAHDD-VQQTPPILQLEE-----ELPIAQRKSKRTTKPPKRLIEECNLS 801
Query: 539 SYAFSMFESIDN-FEPKSYEDALKSANSVEWLNAMN 643
YA S E ++N EP +Y++A++ +S W++AM+
Sbjct: 802 YYALSCAEQVENVHEPATYKEAVRCGDSENWISAMH 837
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 124 bits (311), Expect = 2e-26
Identities = 79/216 (36%), Positives = 123/216 (56%), Gaps = 4/216 (1%)
Frame = +2
Query: 8 KCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 187
K P V+SG D+S LKVFGC A+ H KLEPR+ KC+FLGY GVKGY+LW E
Sbjct: 635 KTPIEVWSGTPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLW-NPET 693
Query: 188 GFKAITSRDVIFNESDFPCLSVTVSLPESEPAPNKVEQLPGL--SHLGESENLHDETVNE 361
G K SR V+FNES + T SLP SE P K Q + H+ + + E V+E
Sbjct: 694 G-KTFMSRSVVFNES----VMFTNSLP-SEHVPEKELQRMHMQVEHVDDDTGVQVEPVHE 747
Query: 362 TDLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRTRRNTRQPLK-FDDFHMT 538
D + + + HD+ V+ P + + E + +A+ +++R T+ P + ++ +++
Sbjct: 748 QDDHNNDVADDDAHDD-VQQTPPILQLEE-----ELPIAQRKSKRTTKPPKRLIEECNLS 801
Query: 539 SYAFSMFESIDN-FEPKSYEDALKSANSVEWLNAMN 643
YA S E ++N EP +Y++A++ +S W++AM+
Sbjct: 802 YYALSCAEQVENVHEPATYKEAVRCGDSENWISAMH 837
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 124 bits (311), Expect = 2e-26
Identities = 76/215 (35%), Positives = 116/215 (53%), Gaps = 4/215 (1%)
Frame = +2
Query: 8 KCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 187
K PE +++GK ++ NL+VFGC A++H KLE R+ K VF+GYP+GVKGY++W + +
Sbjct: 633 KTPEELWNGKPANYQNLRVFGCPAYLHINQGKLEARALKGVFVGYPDGVKGYKIWCKDQG 692
Query: 188 GFKAITSRDVIFNESDFPCLSVTVSLPESEPAPNKVEQLPGLSHLGESENLHDETVNETD 367
K I SRDV+F+ES V L ES ++ P + SE VN
Sbjct: 693 --KCIVSRDVVFHES--------VLLKESAEHDAGLQDNPAANKRSGSET---SKVNVEL 739
Query: 368 LPARNQENANVHDEYVENLP----EVENMPENDNLSDYQLARDRTRRNTRQPLKFDDFHM 535
L ++ E D+ EV +P+ D L +YQLARDR RR R P+++ +
Sbjct: 740 LTDKSSEKEAASDDERATAESEEHEVSELPQAD-LQNYQLARDRVRREVRAPVRYGYADL 798
Query: 536 TSYAFSMFESIDNFEPKSYEDALKSANSVEWLNAM 640
+YA + + EP ++ +A++S + +WL AM
Sbjct: 799 IAYALLCADEVTIEEPANFSEAMESVHCDKWLEAM 833
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 123 bits (309), Expect = 4e-26
Identities = 79/216 (36%), Positives = 123/216 (56%), Gaps = 4/216 (1%)
Frame = +2
Query: 8 KCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 187
K P V+SG D+S LKVFGC A+ H KLEPR+ KC+FLGY GVKGY+LW E
Sbjct: 635 KTPIEVWSGTPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLW-NPET 693
Query: 188 GFKAITSRDVIFNESDFPCLSVTVSLPESEPAPNKVEQLPGL--SHLGESENLHDETVNE 361
G K SR V+FNES + T SLP SE P K Q + H+ + + E V+E
Sbjct: 694 G-KTFMSRSVVFNES----VMFTNSLP-SEHVPEKELQRMHMQVEHVDDYTGVQVEPVHE 747
Query: 362 TDLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRTRRNTRQPLK-FDDFHMT 538
D + + + HD+ V+ P + + E + +A+ +++R T+ P + ++ +++
Sbjct: 748 QDDHNNDVADDDAHDD-VQQTPPILQLEE-----ELPIAQRKSKRTTKPPKRLIEECNLS 801
Query: 539 SYAFSMFESIDN-FEPKSYEDALKSANSVEWLNAMN 643
YA S E ++N EP +Y++A++ +S W++AM+
Sbjct: 802 YYALSCAEQVENVHEPATYKEAVRCGDSENWISAMH 837
>emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera]
Length = 947
Score = 123 bits (308), Expect = 5e-26
Identities = 73/202 (36%), Positives = 105/202 (51%), Gaps = 1/202 (0%)
Frame = +2
Query: 8 KCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 187
K P+ ++GK +D+ +LKVFGC A+VH K DKLEPR+ KC+FLGYP+GVKGY+LW++ +
Sbjct: 635 KTPQEKWTGKVVDYQHLKVFGCTAYVHTKTDKLEPRAVKCIFLGYPKGVKGYKLWIKTQG 694
Query: 188 GFKAITSRDVIFNESDFPCLSVTVSLPESEPAPNKVEQLPGLSHLGESENLHDETVNE-T 364
K I S+D +E ++ S PE + SE + +E V E
Sbjct: 695 KEKCIISKD---SEMEY-----ETSQPEKSTETS-------------SETVQEEIVQERQ 733
Query: 365 DLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRTRRNTRQPLKFDDFHMTSY 544
D P R L Y LARDR +R + P K+ MT++
Sbjct: 734 DEPTR-------------------------GLESYSLARDRQKRQVKPPKKYGQAEMTTF 768
Query: 545 AFSMFESIDNFEPKSYEDALKS 610
A S+ E I + EPK+Y++A+ S
Sbjct: 769 ALSVAEEIVDMEPKTYQEAINS 790
>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
gi|20087076|gb|AAM10749.1|AC112514_2 Putative
retroelement [Oryza sativa Japonica Group]
Length = 1225
Score = 122 bits (307), Expect = 7e-26
Identities = 77/218 (35%), Positives = 120/218 (55%), Gaps = 6/218 (2%)
Frame = +2
Query: 8 KCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 187
K P V+SG ++S+L+VFGC A+ H KLEPR+ KC+FLGYP GVKGY+LW
Sbjct: 604 KTPIKVWSGSPANYSDLRVFGCIAYAHVDNSKLEPRAIKCIFLGYPSGVKGYKLWCPETK 663
Query: 188 GFKAITSRDVIFNES----DFPCLSVTVSLPESEPAPNKVEQLPGLSHLGESENLHDETV 355
K + SR+V+F+ES D P S V + E A +VE L H E EN+ +
Sbjct: 664 --KVVISRNVVFHESVMLHDKP--STNVPVESQEKASVQVEHLISSGHAPEKENV---AI 716
Query: 356 NETDLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRTRRNTRQPLKF-DDFH 532
N D P ++++ V+ P+ + +A+D+ +RN + P ++ ++ +
Sbjct: 717 N-LDAPVIEDSDSSI----------VQQSPK------HSIAKDKPKRNIKPPRRYIEEAN 759
Query: 533 MTSYAFSMFESID-NFEPKSYEDALKSANSVEWLNAMN 643
+ +YA S+ E I+ N EP +Y DA+ S + W+ AM+
Sbjct: 760 IVAYALSVAEEIEGNVEPSTYSDAIVSDDCNRWITAMH 797
>gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1262
Score = 122 bits (307), Expect = 7e-26
Identities = 77/218 (35%), Positives = 120/218 (55%), Gaps = 6/218 (2%)
Frame = +2
Query: 8 KCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 187
K P V+SG ++S+L+VFGC A+ H KLEPR+ KC+FLGYP GVKGY+LW
Sbjct: 641 KTPIKVWSGSPANYSDLRVFGCIAYAHVDNSKLEPRAIKCIFLGYPSGVKGYKLWCPETK 700
Query: 188 GFKAITSRDVIFNES----DFPCLSVTVSLPESEPAPNKVEQLPGLSHLGESENLHDETV 355
K + SR+V+F+ES D P S V + E A +VE L H E EN+ +
Sbjct: 701 --KVVISRNVVFHESVMLHDKP--STNVPVESQEKASVQVEHLISSGHAPEKENV---AI 753
Query: 356 NETDLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRTRRNTRQPLKF-DDFH 532
N D P ++++ V+ P+ + +A+D+ +RN + P ++ ++ +
Sbjct: 754 N-LDAPVIEDSDSSI----------VQQSPK------HSIAKDKPKRNIKPPRRYIEEAN 796
Query: 533 MTSYAFSMFESID-NFEPKSYEDALKSANSVEWLNAMN 643
+ +YA S+ E I+ N EP +Y DA+ S + W+ AM+
Sbjct: 797 IVAYALSVAEEIEGNVEPSTYSDAIVSDDCNRWITAMH 834
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 122 bits (306), Expect = 9e-26
Identities = 78/218 (35%), Positives = 119/218 (54%), Gaps = 6/218 (2%)
Frame = +2
Query: 8 KCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 187
K P V+SG ++S+L+VFGC A+ H KLEPR+ KC+FLGYP GVKGY+LW
Sbjct: 850 KTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETK 909
Query: 188 GFKAITSRDVIFNES----DFPCLSVTVSLPESEPAPNKVEQLPGLSHLGESENLHDETV 355
K + SR+V+F+ES D P S V + E A +VE L H E E D +
Sbjct: 910 --KVVISRNVVFHESVMLHDKP--STNVPVESQEKASVQVEHLISSGHAPEKE---DVAI 962
Query: 356 NETDLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRTRRNTRQPLKF-DDFH 532
N+ D P N+++ V+ P+ +A+DR +RN + P ++ ++ +
Sbjct: 963 NQ-DEPVIEDSNSSI----------VQQSPKR------SIAKDRPKRNIKPPQRYIEEAN 1005
Query: 533 MTSYAFSMFESID-NFEPKSYEDALKSANSVEWLNAMN 643
+ +YA S+ E I+ N EP +Y +A+ S + W+ AM+
Sbjct: 1006 IVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMH 1043
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 119 bits (299), Expect = 6e-25
Identities = 75/218 (34%), Positives = 118/218 (54%), Gaps = 6/218 (2%)
Frame = +2
Query: 8 KCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 187
K P V+SG ++S+L+VFGC A+ H KLEPR+ KC+FLGYP GVKGY+LW
Sbjct: 678 KTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETK 737
Query: 188 GFKAITSRDVIFNES----DFPCLSVTVSLPESEPAPNKVEQLPGLSHLGESENLHDETV 355
K + SR+V+F+ES D P S V + E A +VE L H E EN+ +
Sbjct: 738 --KVVISRNVVFHESVILHDKP--STNVPVESQEKASVQVEHLISSGHAPEKENV---AI 790
Query: 356 NETDLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRTRRNTRQPLKF-DDFH 532
N+ D P ++++ + S +A+D+ +RN + P ++ ++ +
Sbjct: 791 NQ-DAPVIEDSDSSIVQQ----------------SSKRSIAKDKPKRNIKPPRRYIEEAN 833
Query: 533 MTSYAFSMFESID-NFEPKSYEDALKSANSVEWLNAMN 643
+ +YA S+ E I+ N EP +Y +A+ S + W+ AM+
Sbjct: 834 IVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMH 871
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 119 bits (299), Expect = 6e-25
Identities = 80/217 (36%), Positives = 114/217 (52%), Gaps = 6/217 (2%)
Frame = +2
Query: 8 KCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 187
K P ++SGK D+SNLK FGC A+ H KLEPR+KK VF+GY +GVKG+R+W E
Sbjct: 621 KTPMEMWSGKAADYSNLKAFGCTAYYHVSEGKLEPRAKKGVFVGYGDGVKGFRIWSPAEK 680
Query: 188 GFKAITSRDVIFNESDFPCLSVTV---SLPESEPAPNKVE--QLPGLSHLGESENLHDET 352
+ I SR+V+F+ES P L V + E+ +VE + S L E E E
Sbjct: 681 --RVIMSRNVVFDES--PLLRTIVKPTTTSETGSLDKQVEFQVIQNESDLKEPEEEDQEP 736
Query: 353 VNETDLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRTRR-NTRQPLKFDDF 529
ETD+P E+MP + + S +A+DR RR R P ++
Sbjct: 737 QTETDIP--------------------ESMPSDIHQS---IAQDRPRRVGVRPPTRYGFE 773
Query: 530 HMTSYAFSMFESIDNFEPKSYEDALKSANSVEWLNAM 640
M YA + E +D EP +Y++A+ S++S +W AM
Sbjct: 774 DMVGYALQVAEEVDTSEPSTYKEAILSSDSEKWFAAM 810
>emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]
Length = 1009
Score = 119 bits (299), Expect = 6e-25
Identities = 77/218 (35%), Positives = 117/218 (53%), Gaps = 6/218 (2%)
Frame = +2
Query: 8 KCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 187
K P V+S +S+L+VF C A+ H KLEPR+ KC+FLGYP GVKGY+LW
Sbjct: 464 KTPIEVWSSSPAKYSDLRVFSCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETK 523
Query: 188 GFKAITSRDVIFNES----DFPCLSVTVSLPESEPAPNKVEQLPGLSHLGESENLHDETV 355
K + +R+V+F+ES D P S V + E A +VE L H E E D +
Sbjct: 524 --KVVINRNVVFHESVMLHDKP--STNVPVESQEKASVQVEHLISSGHAPEKE---DVAI 576
Query: 356 NETDLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRTRRNTRQPLKF-DDFH 532
N+ D P ++++ V+ P+ +A+DR +RNT+ P K+ ++ +
Sbjct: 577 NQ-DAPVIEDSDSSI----------VQQSPKR------SIAKDRPKRNTKPPRKYIEEAN 619
Query: 533 MTSYAFSMFESID-NFEPKSYEDALKSANSVEWLNAMN 643
+ +YA S+ E I+ N EP +Y DA+ S + W+ AM+
Sbjct: 620 IVTYALSVAEEIEGNTEPSTYSDAIVSDDCNRWITAMH 657
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 119 bits (299), Expect = 6e-25
Identities = 75/218 (34%), Positives = 118/218 (54%), Gaps = 6/218 (2%)
Frame = +2
Query: 8 KCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 187
K P V+SG ++S+L+VFGC A+ H KLEPR+ KC+FLGYP GVKGY+LW
Sbjct: 678 KTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETK 737
Query: 188 GFKAITSRDVIFNES----DFPCLSVTVSLPESEPAPNKVEQLPGLSHLGESENLHDETV 355
K + SR+V+F+ES D P S V + E A +VE L H E EN+ +
Sbjct: 738 --KVVISRNVVFHESVILHDKP--STNVPVESQEKASVQVEHLISSGHAPEKENV---AI 790
Query: 356 NETDLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRTRRNTRQPLKF-DDFH 532
N+ D P ++++ + S +A+D+ +RN + P ++ ++ +
Sbjct: 791 NQ-DAPVIEDSDSSIVQQ----------------SSKRSIAKDKPKRNIKPPRRYIEEAN 833
Query: 533 MTSYAFSMFESID-NFEPKSYEDALKSANSVEWLNAMN 643
+ +YA S+ E I+ N EP +Y +A+ S + W+ AM+
Sbjct: 834 IVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMH 871
>emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]
Length = 1007
Score = 119 bits (299), Expect = 6e-25
Identities = 75/218 (34%), Positives = 121/218 (55%), Gaps = 6/218 (2%)
Frame = +2
Query: 8 KCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 187
K P V+S +++S+L+VFGC A+ H KLEPR+ KC+FLGYP G+KGY+LW
Sbjct: 425 KTPIEVWSDSPVNYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGMKGYKLWCPKTK 484
Query: 188 GFKAITSRDVIFNES----DFPCLSVTVSLPESEPAPNKVEQLPGLSHLGESENLHDETV 355
K + SR+V+F+ES D P S V + E A +VE L H E EN+ +
Sbjct: 485 --KVVISRNVVFHESVMLHDKP--STNVPVESQEKASVQVEHLISSGHAPEKENV---AI 537
Query: 356 NETDLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRTRRNTRQPLKF-DDFH 532
N+ D+P +++ V+ P+ +A+D+ +RNT+ P ++ ++ +
Sbjct: 538 NQ-DVPVIEDSDSST----------VQQSPKR------FIAKDKPKRNTKPPQRYIEEAN 580
Query: 533 MTSYAFSMFESID-NFEPKSYEDALKSANSVEWLNAMN 643
+ +YA S+ E I+ N EP +Y +A+ S + W+ AM+
Sbjct: 581 IVAYALSVAEDIEGNAEPSTYSEAIVSDDCNRWITAMH 618
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 118 bits (296), Expect = 1e-24
Identities = 77/218 (35%), Positives = 117/218 (53%), Gaps = 6/218 (2%)
Frame = +2
Query: 8 KCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 187
K P V+SG ++S+L+VFGC A+ H KLEPR KC+FLGY GVKGY+LW
Sbjct: 552 KTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRVIKCIFLGYLSGVKGYKLWCPETK 611
Query: 188 GFKAITSRDVIFNES----DFPCLSVTVSLPESEPAPNKVEQLPGLSHLGESENLHDETV 355
K + SR+V+F+ES D P S V + E +VE L H E E D +
Sbjct: 612 --KVVISRNVVFHESIMLHDKP--STNVPVESQEKVSVQVEHLISSGHAPEKE---DVAI 664
Query: 356 NETDLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRTRRNTRQPLKF-DDFH 532
N+ D P ++++ V+ P+ +A+DR +RNT+ P ++ ++ +
Sbjct: 665 NQ-DAPVIEDSDSSI----------VQQSPKR------SIAKDRPKRNTKPPRRYIEEAN 707
Query: 533 MTSYAFSMFESID-NFEPKSYEDALKSANSVEWLNAMN 643
+ +YA S+ E I+ N EP +Y DA+ S + W+ AM+
Sbjct: 708 IVAYALSVAEEIEGNAEPSTYSDAIVSDDCNRWITAMH 745
>emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera]
Length = 735
Score = 117 bits (292), Expect = 4e-24
Identities = 75/212 (35%), Positives = 103/212 (48%), Gaps = 1/212 (0%)
Frame = +2
Query: 8 KCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 187
K P+ + GK ++ +LKVFGC +VH K DKLEPR+ KC+FLGYP+GVKGY+LW+ +
Sbjct: 209 KTPQEKWIGKAANYQHLKVFGCTTYVHTKTDKLEPRAVKCIFLGYPKGVKGYKLWIETQG 268
Query: 188 GFKAITSRDVIFNESDFPCLSVTVSLPESEPAPNK-VEQLPGLSHLGESENLHDETVNET 364
K I SRDV FNE D S+ P K VE L E ENL + ET
Sbjct: 269 KRKCIISRDVTFNEQDM-----------SKQTPTKYVEGSDQLQFEVEHENLQPKKFKET 317
Query: 365 DLPARNQENANVHDEYVENLPEVENMPENDNLSDYQLARDRTRRNTRQPLKFDDFHMTSY 544
++ + VH+ E L Y LARD
Sbjct: 318 S--SKTVQEEIVHERQDE---------PTQGLESYSLARD-------------------- 346
Query: 545 AFSMFESIDNFEPKSYEDALKSANSVEWLNAM 640
S+ E I + EPK+Y++A+ S + +W+ A+
Sbjct: 347 --SIAEEIVDMEPKTYQEAINSNEANQWVKAI 376
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 116 bits (291), Expect = 5e-24
Identities = 72/220 (32%), Positives = 110/220 (50%), Gaps = 8/220 (3%)
Frame = +2
Query: 8 KCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGYRLWLRGEP 187
K P+ V+SGK ++S LK+FGC A+ H KLEPR+ KC+FLGY GVKGYRLW +
Sbjct: 742 KTPQEVWSGKPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGYATGVKGYRLWCTEDR 801
Query: 188 GFKAITSRDVIFNESDFPCLSVTVSLPESEPAPNKVEQLPGLSHLGESENLHDET-VNET 364
K I SRDV F+ES + G+ + D ++T
Sbjct: 802 TPKFIISRDVTFDES---------------------------AMFGQRKEFGDLAGTSKT 834
Query: 365 DLPARNQENANVHDEYVENLPEV-ENMPENDNLSDYQLARDRTRRNTRQPLKFDDF---- 529
DL A + V + + E P D +A R RR R+P+++ D
Sbjct: 835 DLGANQKVEFEVDAPMENGVDDTSEEQPVIDQNDSQSIAAHRPRREIRRPMRYVDCVSAN 894
Query: 530 --HMTSYAFSMFESIDNFEPKSYEDALKSANSVEWLNAMN 643
+ ++A ++ E I EP+SY++A++S +S +WL++M+
Sbjct: 895 ITNPVAFALAVAEEIGREEPRSYKEAMESKDSKKWLSSMD 934