BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00009534
         (1277 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006343435.1| PREDICTED: pre-mRNA-processing protein 40A-l...   278   5e-72
ref|XP_006343434.1| PREDICTED: pre-mRNA-processing protein 40A-l...   278   5e-72
ref|XP_006343433.1| PREDICTED: pre-mRNA-processing protein 40A-l...   278   5e-72
emb|CBI19367.3| unnamed protein product [Vitis vinifera]              276   1e-71
ref|XP_004242948.1| PREDICTED: pre-mRNA-processing protein 40A-l...   270   9e-70
ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom...   266   2e-68
gb|EOY15668.1| Pre-mRNA-processing protein 40A isoform 8 [Theobr...   265   2e-68
gb|EOY15667.1| Pre-mRNA-processing protein 40A isoform 7 [Theobr...   265   2e-68
gb|EOY15666.1| Pre-mRNA-processing protein 40A isoform 6 [Theobr...   265   2e-68
gb|EOY15665.1| Pre-mRNA-processing protein 40A isoform 5 [Theobr...   265   2e-68
gb|EOY15664.1| Pre-mRNA-processing protein 40A isoform 4 [Theobr...   265   2e-68
gb|EOY15663.1| Pre-mRNA-processing protein 40A isoform 3 [Theobr...   265   2e-68
gb|EOY15661.1| Pre-mRNA-processing protein 40A isoform 1 [Theobr...   265   2e-68
gb|EMJ28229.1| hypothetical protein PRUPE_ppa000697mg [Prunus pe...   226   1e-56
ref|XP_006827042.1| hypothetical protein AMTR_s00010p00227470 [A...   223   1e-55
ref|XP_004956604.1| PREDICTED: pre-mRNA-processing protein 40A-l...   223   2e-55
gb|EPS62863.1| hypothetical protein M569_11923, partial [Genlise...   220   9e-55
ref|XP_002320019.2| FF domain-containing family protein [Populus...   219   2e-54
ref|XP_006393693.1| hypothetical protein EUTSA_v10011212mg [Eutr...   216   1e-53
ref|NP_175113.2| pre-mRNA-processing protein 40A [Arabidopsis th...   216   1e-53

>ref|XP_006343435.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X3 [Solanum
            tuberosum]
          Length = 864

 Score =  278 bits (710), Expect = 5e-72
 Identities = 176/338 (52%), Positives = 197/338 (58%), Gaps = 19/338 (5%)
 Frame = -1

Query: 1163 MASNPPPSGSQ--WPHPASGSMAPQGFNSPYPMQFRPAAQAPQGQPFNPP-QASQQFHPA 993
            MASNPPPSG Q  WP P+ GS  PQGF S +PMQFRPA    QGQ F PP  AS Q+ P 
Sbjct: 1    MASNPPPSGPQPLWP-PSVGSTPPQGFGS-FPMQFRPALSTQQGQHFAPPISASPQYRPV 58

Query: 992  GQSQNHMMXXXXXXXXXXXXXXXXXXPRPTQTGHA-PSSYPQSSMPLTSGMPQPQPTGPS 816
            GQ+ N  M                  PRP Q+GH  PSS       + S +PQPQ   P 
Sbjct: 59   GQTPNAGMPPGQGQIPQFSQTMQQFPPRPGQSGHGTPSSQAIQMSYIQSSIPQPQQVNPP 118

Query: 815  -----PGVS-----FSSPYTYAPSSFGLXXXXXXXXXXXXXXXXXXXXPGPAGAQPWLHS 666
                 PGVS     FSS YT   SS                         PAG Q WL S
Sbjct: 119  LNSHMPGVSGAGNPFSSSYTVQSSS------------------QMHGPTFPAGGQTWLSS 160

Query: 665  -SQSTPVVAPLQ-QAFPTSATVPAVNGSSTAQ-TASDWQEYEAADGRRYYYNKITKQSSW 495
             SQ+TPV AP    +   SA  PAV  S+ +Q TASDWQEYEAADGRRYYYNK TKQSSW
Sbjct: 161  GSQTTPVAAPTPPSSHQLSAVAPAVPASTASQQTASDWQEYEAADGRRYYYNKNTKQSSW 220

Query: 494  EKPAELMTPLERADASTVWKEFTTPEGRKYYYNKETKQSKWTIPDELKLAREQAEKAASG 315
            EKP ELMTPLERADASTVWKEFTT +GRKYYYNKETKQSKWTIPDELKLARE AE AA  
Sbjct: 221  EKPLELMTPLERADASTVWKEFTTADGRKYYYNKETKQSKWTIPDELKLARELAENAAGQ 280

Query: 314  GAH--SEMNTTVPTTARGSSVEQPSPTVNLASSTTSTI 207
                 +  N+ V  +   +  EQPS    ++S+ +ST+
Sbjct: 281  VVQTGTSTNSGVQVSEAVTPAEQPSAVTPVSSTPSSTV 318


>ref|XP_006343434.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X2 [Solanum
            tuberosum]
          Length = 872

 Score =  278 bits (710), Expect = 5e-72
 Identities = 176/338 (52%), Positives = 197/338 (58%), Gaps = 19/338 (5%)
 Frame = -1

Query: 1163 MASNPPPSGSQ--WPHPASGSMAPQGFNSPYPMQFRPAAQAPQGQPFNPP-QASQQFHPA 993
            MASNPPPSG Q  WP P+ GS  PQGF S +PMQFRPA    QGQ F PP  AS Q+ P 
Sbjct: 1    MASNPPPSGPQPLWP-PSVGSTPPQGFGS-FPMQFRPALSTQQGQHFAPPISASPQYRPV 58

Query: 992  GQSQNHMMXXXXXXXXXXXXXXXXXXPRPTQTGHA-PSSYPQSSMPLTSGMPQPQPTGPS 816
            GQ+ N  M                  PRP Q+GH  PSS       + S +PQPQ   P 
Sbjct: 59   GQTPNAGMPPGQGQIPQFSQTMQQFPPRPGQSGHGTPSSQAIQMSYIQSSIPQPQQVNPP 118

Query: 815  -----PGVS-----FSSPYTYAPSSFGLXXXXXXXXXXXXXXXXXXXXPGPAGAQPWLHS 666
                 PGVS     FSS YT   SS                         PAG Q WL S
Sbjct: 119  LNSHMPGVSGAGNPFSSSYTVQSSS------------------QMHGPTFPAGGQTWLSS 160

Query: 665  -SQSTPVVAPLQ-QAFPTSATVPAVNGSSTAQ-TASDWQEYEAADGRRYYYNKITKQSSW 495
             SQ+TPV AP    +   SA  PAV  S+ +Q TASDWQEYEAADGRRYYYNK TKQSSW
Sbjct: 161  GSQTTPVAAPTPPSSHQLSAVAPAVPASTASQQTASDWQEYEAADGRRYYYNKNTKQSSW 220

Query: 494  EKPAELMTPLERADASTVWKEFTTPEGRKYYYNKETKQSKWTIPDELKLAREQAEKAASG 315
            EKP ELMTPLERADASTVWKEFTT +GRKYYYNKETKQSKWTIPDELKLARE AE AA  
Sbjct: 221  EKPLELMTPLERADASTVWKEFTTADGRKYYYNKETKQSKWTIPDELKLARELAENAAGQ 280

Query: 314  GAH--SEMNTTVPTTARGSSVEQPSPTVNLASSTTSTI 207
                 +  N+ V  +   +  EQPS    ++S+ +ST+
Sbjct: 281  VVQTGTSTNSGVQVSEAVTPAEQPSAVTPVSSTPSSTV 318


>ref|XP_006343433.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X1 [Solanum
            tuberosum]
          Length = 1031

 Score =  278 bits (710), Expect = 5e-72
 Identities = 176/338 (52%), Positives = 197/338 (58%), Gaps = 19/338 (5%)
 Frame = -1

Query: 1163 MASNPPPSGSQ--WPHPASGSMAPQGFNSPYPMQFRPAAQAPQGQPFNPP-QASQQFHPA 993
            MASNPPPSG Q  WP P+ GS  PQGF S +PMQFRPA    QGQ F PP  AS Q+ P 
Sbjct: 1    MASNPPPSGPQPLWP-PSVGSTPPQGFGS-FPMQFRPALSTQQGQHFAPPISASPQYRPV 58

Query: 992  GQSQNHMMXXXXXXXXXXXXXXXXXXPRPTQTGHA-PSSYPQSSMPLTSGMPQPQPTGPS 816
            GQ+ N  M                  PRP Q+GH  PSS       + S +PQPQ   P 
Sbjct: 59   GQTPNAGMPPGQGQIPQFSQTMQQFPPRPGQSGHGTPSSQAIQMSYIQSSIPQPQQVNPP 118

Query: 815  -----PGVS-----FSSPYTYAPSSFGLXXXXXXXXXXXXXXXXXXXXPGPAGAQPWLHS 666
                 PGVS     FSS YT   SS                         PAG Q WL S
Sbjct: 119  LNSHMPGVSGAGNPFSSSYTVQSSS------------------QMHGPTFPAGGQTWLSS 160

Query: 665  -SQSTPVVAPLQ-QAFPTSATVPAVNGSSTAQ-TASDWQEYEAADGRRYYYNKITKQSSW 495
             SQ+TPV AP    +   SA  PAV  S+ +Q TASDWQEYEAADGRRYYYNK TKQSSW
Sbjct: 161  GSQTTPVAAPTPPSSHQLSAVAPAVPASTASQQTASDWQEYEAADGRRYYYNKNTKQSSW 220

Query: 494  EKPAELMTPLERADASTVWKEFTTPEGRKYYYNKETKQSKWTIPDELKLAREQAEKAASG 315
            EKP ELMTPLERADASTVWKEFTT +GRKYYYNKETKQSKWTIPDELKLARE AE AA  
Sbjct: 221  EKPLELMTPLERADASTVWKEFTTADGRKYYYNKETKQSKWTIPDELKLARELAENAAGQ 280

Query: 314  GAH--SEMNTTVPTTARGSSVEQPSPTVNLASSTTSTI 207
                 +  N+ V  +   +  EQPS    ++S+ +ST+
Sbjct: 281  VVQTGTSTNSGVQVSEAVTPAEQPSAVTPVSSTPSSTV 318


>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
          Length = 1030

 Score =  276 bits (706), Expect = 1e-71
 Identities = 177/348 (50%), Positives = 202/348 (58%), Gaps = 29/348 (8%)
 Frame = -1

Query: 1163 MASNPPPSGSQ-WPHPASGSMAPQGFNSPYPMQFRPAAQAPQGQPFNPPQASQQFHPAGQ 987
            MA+NP  SG+Q    PA GSM PQ F  P  MQFRPA    QG PF P  ASQQF P GQ
Sbjct: 1    MANNPQSSGAQPLRPPAVGSMGPQNFGPPLSMQFRPAVPGQQGHPFIPA-ASQQFRPIGQ 59

Query: 986  ---SQNHMMXXXXXXXXXXXXXXXXXXPRPTQTGH-APSSYP------QSSMPLTSGMPQ 837
               S N                     PRP Q G  APSS P      Q + PLTS  PQ
Sbjct: 60   NISSPNVGGPSGQNQPPQFSQAMQQLPPRPNQPGPIAPSSQPIPMPYIQQNRPLTSSSPQ 119

Query: 836  PQPTGP----------SPGVSFSSPYTYAPSSFGLXXXXXXXXXXXXXXXXXXXXPGPAG 687
            P  T P           PG+ FSS YT+AP+SFG                       P G
Sbjct: 120  PNQTAPPLNSHMPGLAGPGMPFSSSYTFAPASFG---QPQSTINASAQFQPISQMHAPVG 176

Query: 686  AQPWLHS-SQSTPVVAPLQQAFP---TSATVPAVN-GSSTAQTASDWQEYEAADGRRYYY 522
             QPWL S SQS  +V P+ QA      +A +PA N  + T Q++SDWQE+ +ADGRRYYY
Sbjct: 177  GQPWLSSGSQSGALVTPVHQAGQQPSVTADIPAGNVPNPTHQSSSDWQEHTSADGRRYYY 236

Query: 521  NKITKQSSWEKPAELMTPLERADASTVWKEFTTPEGRKYYYNKETKQSKWTIPDELKLAR 342
            NK T+ SSWEKP ELMTP+ERADASTVWKEFTTPEGRKYYYNK TKQSKWTIP+ELKLAR
Sbjct: 237  NKKTRLSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLAR 296

Query: 341  EQAEKAASGGAHSEMNTT--VPTTARGSSVEQPS-PTVNLASSTTSTI 207
            EQAEK+ S    SEM TT   P     S  E PS  +V+++S+T+STI
Sbjct: 297  EQAEKSVSQETQSEMGTTSNEPAVVAVSLAETPSTASVSVSSTTSSTI 344


>ref|XP_004242948.1| PREDICTED: pre-mRNA-processing protein 40A-like [Solanum
            lycopersicum]
          Length = 998

 Score =  270 bits (690), Expect = 9e-70
 Identities = 174/338 (51%), Positives = 194/338 (57%), Gaps = 19/338 (5%)
 Frame = -1

Query: 1163 MASNPPPSGSQ--WPHPASGSMAPQGFNSPYPMQFRPAAQAPQGQPFNPP-QASQQFHPA 993
            MASNPPPSG Q  WP P+ GS  PQGF S +PMQFRPA    QGQ F PP  AS Q+ P 
Sbjct: 1    MASNPPPSGPQPLWP-PSVGSTPPQGFGS-FPMQFRPALSTQQGQHFAPPISASPQYRPV 58

Query: 992  GQSQNHMMXXXXXXXXXXXXXXXXXXPRPTQTGHA-PSSYPQSSMPLTSGMPQPQPTGPS 816
            GQ+ N  M                  PRP Q GH  PSS         S + QPQ   P 
Sbjct: 59   GQTPNAGMPPGQGQIPQFSQTMQQFPPRPGQPGHGTPSSQAIQMSYNQSSISQPQQVNPP 118

Query: 815  -----PGVS-----FSSPYTYAPSSFGLXXXXXXXXXXXXXXXXXXXXPGPAGAQPWLHS 666
                 PGVS     FSS YT   SS                         PAG QPWL S
Sbjct: 119  LNSHMPGVSGAGNPFSSSYTVQSSS------------------QMHGPTFPAGGQPWLSS 160

Query: 665  -SQSTPVVAPLQ-QAFPTSATVPAVNGSSTAQ-TASDWQEYEAADGRRYYYNKITKQSSW 495
             SQ+TPV  P    +    A  PAV  S+ +Q TASDWQEYEAADGRRYYYNK TKQSSW
Sbjct: 161  GSQTTPVGDPTPPSSHQLLAVAPAVPASTASQQTASDWQEYEAADGRRYYYNKNTKQSSW 220

Query: 494  EKPAELMTPLERADASTVWKEFTTPEGRKYYYNKETKQSKWTIPDELKLAREQAEKAASG 315
            EKP ELMTPLERADASTVWKEFTT +GRKYYYNKETKQSKWT+PDELKLARE AE  AS 
Sbjct: 221  EKPLELMTPLERADASTVWKEFTTADGRKYYYNKETKQSKWTMPDELKLARELAENVASQ 280

Query: 314  GAH--SEMNTTVPTTARGSSVEQPSPTVNLASSTTSTI 207
                 +  N+ V  +   +S EQPS    ++S+ +ST+
Sbjct: 281  VVQTGTSTNSGVQVSEAVTSTEQPSAVTPVSSTPSSTV 318


>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
            vinifera]
          Length = 1020

 Score =  266 bits (679), Expect = 2e-68
 Identities = 172/344 (50%), Positives = 198/344 (57%), Gaps = 21/344 (6%)
 Frame = -1

Query: 1175 LAASMASNPPPSGSQ-WPHPASGSMAPQGFNSPYPMQFRPAAQAPQGQPFNPPQASQQFH 999
            L A MA+NP  SG+Q    PA GSM PQ F  P  MQFRPA    QG PF P  ASQQF 
Sbjct: 11   LCAGMANNPQSSGAQPLRPPAVGSMGPQNFGPPLSMQFRPAVPGQQGHPFIPA-ASQQFR 69

Query: 998  PAGQ---SQNHMMXXXXXXXXXXXXXXXXXXPRPTQTGH-APSSYP------QSSMPLTS 849
            P GQ   S N                     PRP Q G  APSS P      Q + PLTS
Sbjct: 70   PIGQNISSPNVGGPSGQNQPPQFSQAMQQLPPRPNQPGPIAPSSQPIPMPYIQQNRPLTS 129

Query: 848  GMPQPQPTGPSPGVSFSSPYTYAPSSFGLXXXXXXXXXXXXXXXXXXXXPGPAGAQPWLH 669
              PQP  T P   ++   P  +AP+SFG                       P G QPWL 
Sbjct: 130  SSPQPNQTAPP--LNSHMPGLFAPASFG---QPQSTINASAQFQPISQMHAPVGGQPWLS 184

Query: 668  S-SQSTPVVAPLQQAFP---TSATVPAVNGS---STAQTASDWQEYEAADGRRYYYNKIT 510
            S SQS  +V P+ QA      +A +P   G+    T Q++SDWQE+ +ADGRRYYYNK T
Sbjct: 185  SGSQSGALVTPVHQAGQQPSVTADIPVSAGNVPNPTHQSSSDWQEHTSADGRRYYYNKKT 244

Query: 509  KQSSWEKPAELMTPLERADASTVWKEFTTPEGRKYYYNKETKQSKWTIPDELKLAREQAE 330
            + SSWEKP ELMTP+ERADASTVWKEFTTPEGRKYYYNK TKQSKWTIP+ELKLAREQAE
Sbjct: 245  RLSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLAREQAE 304

Query: 329  KAASGGAHSEMNTT--VPTTARGSSVEQPS-PTVNLASSTTSTI 207
            K+ S    SEM TT   P     S  E PS  +V+++S+T+STI
Sbjct: 305  KSVSQETQSEMGTTSNEPAVVAVSLAETPSTASVSVSSTTSSTI 348


>gb|EOY15668.1| Pre-mRNA-processing protein 40A isoform 8 [Theobroma cacao]
          Length = 789

 Score =  265 bits (678), Expect = 2e-68
 Identities = 164/348 (47%), Positives = 196/348 (56%), Gaps = 32/348 (9%)
 Frame = -1

Query: 1163 MASNPPPSGSQ--WPHPASGSMAPQGFNSPYPMQFRPAAQAPQGQPFNPPQASQQFHPAG 990
            MA+N  PS +Q  WP PA GS+ PQ + SP   QFRP     QGQ F  P ASQQF P G
Sbjct: 1    MANNSQPSSAQPHWP-PAVGSLGPQSYGSPLSSQFRPVVPMQQGQHF-VPAASQQFRPVG 58

Query: 989  Q--SQNHMMXXXXXXXXXXXXXXXXXXPRPTQTG-HAPSSYP------QSSMPLTSGMPQ 837
            Q  S N  M                  PRP Q G  APS+ P      Q++ PLTSG PQ
Sbjct: 59   QVPSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQ 118

Query: 836  PQPTGP----------SPGVSFSSPYTYAPSSFGLXXXXXXXXXXXXXXXXXXXXPGPAG 687
               T P          +PG+  SS Y+Y PSSFG                       P  
Sbjct: 119  SHQTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVA 178

Query: 686  AQPWLHS-SQSTPVVAPLQQAFPTSATVPAVNGSSTAQ--------TASDWQEYEAADGR 534
             QPWL S +QS  +  P+QQ   T    P ++ + TA         +ASDWQE+ +ADGR
Sbjct: 179  GQPWLSSGNQSVSLAIPIQQ---TGQQPPLISSADTAANAPIHTPPSASDWQEHTSADGR 235

Query: 533  RYYYNKITKQSSWEKPAELMTPLERADASTVWKEFTTPEGRKYYYNKETKQSKWTIPDEL 354
            RYYYNK T+QSSWEKP ELMTP+ERADASTVWKEFTTPEGRKYYYNK TKQSKWTIP+EL
Sbjct: 236  RYYYNKKTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEEL 295

Query: 353  KLAREQAEKAASGGAHSE--MNTTVPTTARGSSVEQPSPTVNLASSTT 216
            KLAREQA+  AS GA S+  + +  P     SS E P+  + ++S+T+
Sbjct: 296  KLAREQAQVVASQGAPSDTGVASQAPVAGAVSSAEMPAAAIPVSSNTS 343


>gb|EOY15667.1| Pre-mRNA-processing protein 40A isoform 7 [Theobroma cacao]
          Length = 787

 Score =  265 bits (678), Expect = 2e-68
 Identities = 164/348 (47%), Positives = 196/348 (56%), Gaps = 32/348 (9%)
 Frame = -1

Query: 1163 MASNPPPSGSQ--WPHPASGSMAPQGFNSPYPMQFRPAAQAPQGQPFNPPQASQQFHPAG 990
            MA+N  PS +Q  WP PA GS+ PQ + SP   QFRP     QGQ F  P ASQQF P G
Sbjct: 1    MANNSQPSSAQPHWP-PAVGSLGPQSYGSPLSSQFRPVVPMQQGQHF-VPAASQQFRPVG 58

Query: 989  Q--SQNHMMXXXXXXXXXXXXXXXXXXPRPTQTG-HAPSSYP------QSSMPLTSGMPQ 837
            Q  S N  M                  PRP Q G  APS+ P      Q++ PLTSG PQ
Sbjct: 59   QVPSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQ 118

Query: 836  PQPTGP----------SPGVSFSSPYTYAPSSFGLXXXXXXXXXXXXXXXXXXXXPGPAG 687
               T P          +PG+  SS Y+Y PSSFG                       P  
Sbjct: 119  SHQTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVA 178

Query: 686  AQPWLHS-SQSTPVVAPLQQAFPTSATVPAVNGSSTAQ--------TASDWQEYEAADGR 534
             QPWL S +QS  +  P+QQ   T    P ++ + TA         +ASDWQE+ +ADGR
Sbjct: 179  GQPWLSSGNQSVSLAIPIQQ---TGQQPPLISSADTAANAPIHTPPSASDWQEHTSADGR 235

Query: 533  RYYYNKITKQSSWEKPAELMTPLERADASTVWKEFTTPEGRKYYYNKETKQSKWTIPDEL 354
            RYYYNK T+QSSWEKP ELMTP+ERADASTVWKEFTTPEGRKYYYNK TKQSKWTIP+EL
Sbjct: 236  RYYYNKKTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEEL 295

Query: 353  KLAREQAEKAASGGAHSE--MNTTVPTTARGSSVEQPSPTVNLASSTT 216
            KLAREQA+  AS GA S+  + +  P     SS E P+  + ++S+T+
Sbjct: 296  KLAREQAQVVASQGAPSDTGVASQAPVAGAVSSAEMPAAAIPVSSNTS 343


>gb|EOY15666.1| Pre-mRNA-processing protein 40A isoform 6 [Theobroma cacao]
          Length = 774

 Score =  265 bits (678), Expect = 2e-68
 Identities = 164/348 (47%), Positives = 196/348 (56%), Gaps = 32/348 (9%)
 Frame = -1

Query: 1163 MASNPPPSGSQ--WPHPASGSMAPQGFNSPYPMQFRPAAQAPQGQPFNPPQASQQFHPAG 990
            MA+N  PS +Q  WP PA GS+ PQ + SP   QFRP     QGQ F  P ASQQF P G
Sbjct: 1    MANNSQPSSAQPHWP-PAVGSLGPQSYGSPLSSQFRPVVPMQQGQHF-VPAASQQFRPVG 58

Query: 989  Q--SQNHMMXXXXXXXXXXXXXXXXXXPRPTQTG-HAPSSYP------QSSMPLTSGMPQ 837
            Q  S N  M                  PRP Q G  APS+ P      Q++ PLTSG PQ
Sbjct: 59   QVPSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQ 118

Query: 836  PQPTGP----------SPGVSFSSPYTYAPSSFGLXXXXXXXXXXXXXXXXXXXXPGPAG 687
               T P          +PG+  SS Y+Y PSSFG                       P  
Sbjct: 119  SHQTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVA 178

Query: 686  AQPWLHS-SQSTPVVAPLQQAFPTSATVPAVNGSSTAQ--------TASDWQEYEAADGR 534
             QPWL S +QS  +  P+QQ   T    P ++ + TA         +ASDWQE+ +ADGR
Sbjct: 179  GQPWLSSGNQSVSLAIPIQQ---TGQQPPLISSADTAANAPIHTPPSASDWQEHTSADGR 235

Query: 533  RYYYNKITKQSSWEKPAELMTPLERADASTVWKEFTTPEGRKYYYNKETKQSKWTIPDEL 354
            RYYYNK T+QSSWEKP ELMTP+ERADASTVWKEFTTPEGRKYYYNK TKQSKWTIP+EL
Sbjct: 236  RYYYNKKTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEEL 295

Query: 353  KLAREQAEKAASGGAHSE--MNTTVPTTARGSSVEQPSPTVNLASSTT 216
            KLAREQA+  AS GA S+  + +  P     SS E P+  + ++S+T+
Sbjct: 296  KLAREQAQVVASQGAPSDTGVASQAPVAGAVSSAEMPAAAIPVSSNTS 343


>gb|EOY15665.1| Pre-mRNA-processing protein 40A isoform 5 [Theobroma cacao]
          Length = 904

 Score =  265 bits (678), Expect = 2e-68
 Identities = 164/348 (47%), Positives = 196/348 (56%), Gaps = 32/348 (9%)
 Frame = -1

Query: 1163 MASNPPPSGSQ--WPHPASGSMAPQGFNSPYPMQFRPAAQAPQGQPFNPPQASQQFHPAG 990
            MA+N  PS +Q  WP PA GS+ PQ + SP   QFRP     QGQ F  P ASQQF P G
Sbjct: 1    MANNSQPSSAQPHWP-PAVGSLGPQSYGSPLSSQFRPVVPMQQGQHF-VPAASQQFRPVG 58

Query: 989  Q--SQNHMMXXXXXXXXXXXXXXXXXXPRPTQTG-HAPSSYP------QSSMPLTSGMPQ 837
            Q  S N  M                  PRP Q G  APS+ P      Q++ PLTSG PQ
Sbjct: 59   QVPSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQ 118

Query: 836  PQPTGP----------SPGVSFSSPYTYAPSSFGLXXXXXXXXXXXXXXXXXXXXPGPAG 687
               T P          +PG+  SS Y+Y PSSFG                       P  
Sbjct: 119  SHQTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVA 178

Query: 686  AQPWLHS-SQSTPVVAPLQQAFPTSATVPAVNGSSTAQ--------TASDWQEYEAADGR 534
             QPWL S +QS  +  P+QQ   T    P ++ + TA         +ASDWQE+ +ADGR
Sbjct: 179  GQPWLSSGNQSVSLAIPIQQ---TGQQPPLISSADTAANAPIHTPPSASDWQEHTSADGR 235

Query: 533  RYYYNKITKQSSWEKPAELMTPLERADASTVWKEFTTPEGRKYYYNKETKQSKWTIPDEL 354
            RYYYNK T+QSSWEKP ELMTP+ERADASTVWKEFTTPEGRKYYYNK TKQSKWTIP+EL
Sbjct: 236  RYYYNKKTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEEL 295

Query: 353  KLAREQAEKAASGGAHSE--MNTTVPTTARGSSVEQPSPTVNLASSTT 216
            KLAREQA+  AS GA S+  + +  P     SS E P+  + ++S+T+
Sbjct: 296  KLAREQAQVVASQGAPSDTGVASQAPVAGAVSSAEMPAAAIPVSSNTS 343


>gb|EOY15664.1| Pre-mRNA-processing protein 40A isoform 4 [Theobroma cacao]
          Length = 844

 Score =  265 bits (678), Expect = 2e-68
 Identities = 164/348 (47%), Positives = 196/348 (56%), Gaps = 32/348 (9%)
 Frame = -1

Query: 1163 MASNPPPSGSQ--WPHPASGSMAPQGFNSPYPMQFRPAAQAPQGQPFNPPQASQQFHPAG 990
            MA+N  PS +Q  WP PA GS+ PQ + SP   QFRP     QGQ F  P ASQQF P G
Sbjct: 1    MANNSQPSSAQPHWP-PAVGSLGPQSYGSPLSSQFRPVVPMQQGQHF-VPAASQQFRPVG 58

Query: 989  Q--SQNHMMXXXXXXXXXXXXXXXXXXPRPTQTG-HAPSSYP------QSSMPLTSGMPQ 837
            Q  S N  M                  PRP Q G  APS+ P      Q++ PLTSG PQ
Sbjct: 59   QVPSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQ 118

Query: 836  PQPTGP----------SPGVSFSSPYTYAPSSFGLXXXXXXXXXXXXXXXXXXXXPGPAG 687
               T P          +PG+  SS Y+Y PSSFG                       P  
Sbjct: 119  SHQTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVA 178

Query: 686  AQPWLHS-SQSTPVVAPLQQAFPTSATVPAVNGSSTAQ--------TASDWQEYEAADGR 534
             QPWL S +QS  +  P+QQ   T    P ++ + TA         +ASDWQE+ +ADGR
Sbjct: 179  GQPWLSSGNQSVSLAIPIQQ---TGQQPPLISSADTAANAPIHTPPSASDWQEHTSADGR 235

Query: 533  RYYYNKITKQSSWEKPAELMTPLERADASTVWKEFTTPEGRKYYYNKETKQSKWTIPDEL 354
            RYYYNK T+QSSWEKP ELMTP+ERADASTVWKEFTTPEGRKYYYNK TKQSKWTIP+EL
Sbjct: 236  RYYYNKKTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEEL 295

Query: 353  KLAREQAEKAASGGAHSE--MNTTVPTTARGSSVEQPSPTVNLASSTT 216
            KLAREQA+  AS GA S+  + +  P     SS E P+  + ++S+T+
Sbjct: 296  KLAREQAQVVASQGAPSDTGVASQAPVAGAVSSAEMPAAAIPVSSNTS 343


>gb|EOY15663.1| Pre-mRNA-processing protein 40A isoform 3 [Theobroma cacao]
          Length = 1041

 Score =  265 bits (678), Expect = 2e-68
 Identities = 164/348 (47%), Positives = 196/348 (56%), Gaps = 32/348 (9%)
 Frame = -1

Query: 1163 MASNPPPSGSQ--WPHPASGSMAPQGFNSPYPMQFRPAAQAPQGQPFNPPQASQQFHPAG 990
            MA+N  PS +Q  WP PA GS+ PQ + SP   QFRP     QGQ F  P ASQQF P G
Sbjct: 1    MANNSQPSSAQPHWP-PAVGSLGPQSYGSPLSSQFRPVVPMQQGQHF-VPAASQQFRPVG 58

Query: 989  Q--SQNHMMXXXXXXXXXXXXXXXXXXPRPTQTG-HAPSSYP------QSSMPLTSGMPQ 837
            Q  S N  M                  PRP Q G  APS+ P      Q++ PLTSG PQ
Sbjct: 59   QVPSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQ 118

Query: 836  PQPTGP----------SPGVSFSSPYTYAPSSFGLXXXXXXXXXXXXXXXXXXXXPGPAG 687
               T P          +PG+  SS Y+Y PSSFG                       P  
Sbjct: 119  SHQTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVA 178

Query: 686  AQPWLHS-SQSTPVVAPLQQAFPTSATVPAVNGSSTAQ--------TASDWQEYEAADGR 534
             QPWL S +QS  +  P+QQ   T    P ++ + TA         +ASDWQE+ +ADGR
Sbjct: 179  GQPWLSSGNQSVSLAIPIQQ---TGQQPPLISSADTAANAPIHTPPSASDWQEHTSADGR 235

Query: 533  RYYYNKITKQSSWEKPAELMTPLERADASTVWKEFTTPEGRKYYYNKETKQSKWTIPDEL 354
            RYYYNK T+QSSWEKP ELMTP+ERADASTVWKEFTTPEGRKYYYNK TKQSKWTIP+EL
Sbjct: 236  RYYYNKKTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEEL 295

Query: 353  KLAREQAEKAASGGAHSE--MNTTVPTTARGSSVEQPSPTVNLASSTT 216
            KLAREQA+  AS GA S+  + +  P     SS E P+  + ++S+T+
Sbjct: 296  KLAREQAQVVASQGAPSDTGVASQAPVAGAVSSAEMPAAAIPVSSNTS 343


>gb|EOY15661.1| Pre-mRNA-processing protein 40A isoform 1 [Theobroma cacao]
            gi|508723765|gb|EOY15662.1| Pre-mRNA-processing protein
            40A isoform 1 [Theobroma cacao]
          Length = 1032

 Score =  265 bits (678), Expect = 2e-68
 Identities = 164/348 (47%), Positives = 196/348 (56%), Gaps = 32/348 (9%)
 Frame = -1

Query: 1163 MASNPPPSGSQ--WPHPASGSMAPQGFNSPYPMQFRPAAQAPQGQPFNPPQASQQFHPAG 990
            MA+N  PS +Q  WP PA GS+ PQ + SP   QFRP     QGQ F  P ASQQF P G
Sbjct: 1    MANNSQPSSAQPHWP-PAVGSLGPQSYGSPLSSQFRPVVPMQQGQHF-VPAASQQFRPVG 58

Query: 989  Q--SQNHMMXXXXXXXXXXXXXXXXXXPRPTQTG-HAPSSYP------QSSMPLTSGMPQ 837
            Q  S N  M                  PRP Q G  APS+ P      Q++ PLTSG PQ
Sbjct: 59   QVPSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQ 118

Query: 836  PQPTGP----------SPGVSFSSPYTYAPSSFGLXXXXXXXXXXXXXXXXXXXXPGPAG 687
               T P          +PG+  SS Y+Y PSSFG                       P  
Sbjct: 119  SHQTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVA 178

Query: 686  AQPWLHS-SQSTPVVAPLQQAFPTSATVPAVNGSSTAQ--------TASDWQEYEAADGR 534
             QPWL S +QS  +  P+QQ   T    P ++ + TA         +ASDWQE+ +ADGR
Sbjct: 179  GQPWLSSGNQSVSLAIPIQQ---TGQQPPLISSADTAANAPIHTPPSASDWQEHTSADGR 235

Query: 533  RYYYNKITKQSSWEKPAELMTPLERADASTVWKEFTTPEGRKYYYNKETKQSKWTIPDEL 354
            RYYYNK T+QSSWEKP ELMTP+ERADASTVWKEFTTPEGRKYYYNK TKQSKWTIP+EL
Sbjct: 236  RYYYNKKTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEEL 295

Query: 353  KLAREQAEKAASGGAHSE--MNTTVPTTARGSSVEQPSPTVNLASSTT 216
            KLAREQA+  AS GA S+  + +  P     SS E P+  + ++S+T+
Sbjct: 296  KLAREQAQVVASQGAPSDTGVASQAPVAGAVSSAEMPAAAIPVSSNTS 343


>gb|EMJ28229.1| hypothetical protein PRUPE_ppa000697mg [Prunus persica]
          Length = 1031

 Score =  226 bits (577), Expect = 1e-56
 Identities = 153/410 (37%), Positives = 196/410 (47%), Gaps = 27/410 (6%)
 Frame = -1

Query: 1163 MASNPPPSGSQ-WPHPASGSMAPQGFNSPYPMQFRPAAQAPQGQPFNPPQASQQFHPAGQ 987
            MA+NP  S +Q +  P   S+ PQ F S   +Q+RP     QGQ F    ASQQF P GQ
Sbjct: 1    MANNPQSSAAQPFRPPPVASLGPQSFGSSPSLQYRPVVPTQQGQQFIQ-SASQQFQPVGQ 59

Query: 986  ---SQNHMMXXXXXXXXXXXXXXXXXXPRPTQTGHA-------PSSYPQSSMPLTSGMPQ 837
               S N  M                   RP+Q GHA       P  Y Q+  P+TS   Q
Sbjct: 60   GIPSSNVGMPASQSQQLQFSQPMQPYPLRPSQPGHATPSSQALPMQYMQTR-PITSAPSQ 118

Query: 836  PQ----------PTGPSPGVSFSSPYTYAPSSFGLXXXXXXXXXXXXXXXXXXXXPGPAG 687
             Q          P     G+ +SS Y +AP S+                          G
Sbjct: 119  SQQPALPFNNQMPGLAGGGMPYSSSYIFAPPSYAQPQNNVSSSSQFQPISQVQAHVSVTG 178

Query: 686  AQPWLHSSQS-----TPVVAPLQQAFPTSATVPAVN-GSSTAQTASDWQEYEAADGRRYY 525
             QPW+ S        TPV    QQ   T+ T  AVN  S T Q++SDWQE+ + DGRRYY
Sbjct: 179  -QPWVSSGNQGAAVPTPVPQSGQQPSSTTFTDSAVNVPSQTQQSSSDWQEHTSGDGRRYY 237

Query: 524  YNKITKQSSWEKPAELMTPLERADASTVWKEFTTPEGRKYYYNKETKQSKWTIPDELKLA 345
            +N+ TKQSSWEKP ELMTP+ERADASTVWKE+T+ +G+KYYYNK T++SKWTIP+ELKLA
Sbjct: 238  FNRRTKQSSWEKPLELMTPMERADASTVWKEYTSSDGKKYYYNKVTRESKWTIPEELKLA 297

Query: 344  REQAEKAASGGAHSEMNTTVPTTARGSSVEQPSPTVNLASSTTSTIXXXXXXXXXXXXXX 165
            REQA++  + G  SEMN T       +S E P  + ++  ST+S +              
Sbjct: 298  REQAQRELAQGTRSEMNLTSHAPPAVASAETPMGSSSVGPSTSSALPGMVSSPVAVIPVS 357

Query: 164  XXXXXXSIMVSEXXXXXXXXXXXXXALGVSSVGETVASSPSEVPGSSGAP 15
                   I  +               +G+     TV   P+ V GS+G P
Sbjct: 358  SFSNPSPIAPTGSSVASGAQSSITGGVGIQPPVVTVTPPPASVSGSTGVP 407


>ref|XP_006827042.1| hypothetical protein AMTR_s00010p00227470 [Amborella trichopoda]
            gi|548831471|gb|ERM94279.1| hypothetical protein
            AMTR_s00010p00227470 [Amborella trichopoda]
          Length = 985

 Score =  223 bits (569), Expect = 1e-55
 Identities = 155/337 (45%), Positives = 178/337 (52%), Gaps = 35/337 (10%)
 Frame = -1

Query: 1112 GSMAPQGFNSPYPMQFRPAAQAPQGQPFNPPQASQQFHPAGQ----SQNHMMXXXXXXXX 945
            G   PQ + +P  MQFRP     Q QPF     SQQF P GQ    S             
Sbjct: 2    GPGGPQNYGTPMSMQFRPMVPTQQSQPFISAP-SQQFRPVGQGIPASNIGSPSPVQAQQA 60

Query: 944  XXXXXXXXXXPRPTQTGHA-------PSSYPQSSMPLTSG---MPQ-PQ------PTGPS 816
                      PRP QT          P SY Q + P+TSG   +PQ PQ      P    
Sbjct: 61   QYALGMQQLPPRPAQTAQVAPSPQTVPLSYIQPNRPMTSGPLQIPQNPQHVNIHPPGLGG 120

Query: 815  PGVSFSSPYTY-APSSFGLXXXXXXXXXXXXXXXXXXXXPGPAGA--QPWLHS-SQSTPV 648
            PG   SS YT+ APSS+                        P+G+  QPWL S SQST V
Sbjct: 121  PGTVLSSSYTFTAPSSYVHPQNNINISSQYQPSSQMQVPGVPSGSGGQPWLSSGSQSTTV 180

Query: 647  VAPLQQAFPTS------ATVPAVNGSSTAQTASDWQEYEAADGRRYYYNKITKQSSWEKP 486
            + P+ QA   S      A V     + T+Q++SDWQE+ +ADGRRYYYNK T+QSSWEKP
Sbjct: 181  IPPVVQASQQSSFAASTAPVATPQPNPTSQSSSDWQEHTSADGRRYYYNKKTRQSSWEKP 240

Query: 485  AELMTPLERADASTVWKEFTTPEGRKYYYNKETKQSKWTIPDELKLAREQAEKAASGGAH 306
             ELMTP+ERADASTVWKEFTTPEGRKYYYNK TKQSKWTIPDELKLAREQAEK  +   +
Sbjct: 241  LELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPDELKLAREQAEKNGTQLTN 300

Query: 305  SEMNTTV----PTTARGSSVEQPSPTVNLASSTTSTI 207
            SE    V    P T      E PS TV   S+T S +
Sbjct: 301  SETTDVVASSTPVTVTVPLTEMPS-TVAAISATQSAM 336


>ref|XP_004956604.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X1 [Setaria
            italica] gi|514729049|ref|XP_004956605.1| PREDICTED:
            pre-mRNA-processing protein 40A-like isoform X2 [Setaria
            italica] gi|514729053|ref|XP_004956606.1| PREDICTED:
            pre-mRNA-processing protein 40A-like isoform X3 [Setaria
            italica] gi|514729057|ref|XP_004956607.1| PREDICTED:
            pre-mRNA-processing protein 40A-like isoform X4 [Setaria
            italica]
          Length = 983

 Score =  223 bits (567), Expect = 2e-55
 Identities = 148/330 (44%), Positives = 173/330 (52%), Gaps = 15/330 (4%)
 Frame = -1

Query: 1163 MASNPPPSGSQWPH--PASGSMA-PQGFNSPYPMQFRPAAQAPQGQPFNPPQASQQFHPA 993
            MASN  PSG   P   P  GS A PQ    P PMQFRP   + Q   F PP A QQF P 
Sbjct: 1    MASNMQPSGPPQPPRPPMMGSNAQPQNLGPPMPMQFRPVVPSQQPPQFMPPPA-QQFRPV 59

Query: 992  GQSQ---NHMMXXXXXXXXXXXXXXXXXXPRPTQTGHAPSSYPQSSMPLTSGMPQPQ--- 831
            GQ     N  M                    P  +   P +Y Q + P++S   QPQ   
Sbjct: 60   GQPMPGANIGMPGQMPHFPQPGQHLSHSSQVPPASQGVPMAY-QPARPMSSAPMQPQQQA 118

Query: 830  --PTG--PSPGVSFSSP-YTYAPSSFGLXXXXXXXXXXXXXXXXXXXXPGPAGAQPWLHS 666
              P G  P+ G     P YTY P+S                         P   QPW  S
Sbjct: 119  VYPGGHMPTMGAPMQPPSYTYQPTSI------------------------PPVVQPWGQS 154

Query: 665  -SQSTPVVAPLQQAFPTSATVPAVNGSSTAQTASDWQEYEAADGRRYYYNKITKQSSWEK 489
                TP+V P  Q  P +AT+P+VN S  +  +SDWQE+ AA+G++YYYNK T+QSSWEK
Sbjct: 155  VPHVTPLVQPGHQPVPATATLPSVNSSEPS--SSDWQEHTAAEGKKYYYNKKTRQSSWEK 212

Query: 488  PAELMTPLERADASTVWKEFTTPEGRKYYYNKETKQSKWTIPDELKLAREQAEKAASGGA 309
            P ELMTPLERADAST WKEFTTPEGRKYY+NK TKQSKWTIPDELK ARE AEKA++   
Sbjct: 213  PVELMTPLERADASTEWKEFTTPEGRKYYFNKVTKQSKWTIPDELKAARELAEKASN--Q 270

Query: 308  HSEMNTTVPTTARGSSVEQPSPTVNLASST 219
             S+  T       GS+  +PS      SST
Sbjct: 271  QSDRETGTAAALVGSAASEPSTVPANQSST 300


>gb|EPS62863.1| hypothetical protein M569_11923, partial [Genlisea aurea]
          Length = 580

 Score =  220 bits (561), Expect = 9e-55
 Identities = 130/239 (54%), Positives = 151/239 (63%), Gaps = 15/239 (6%)
 Frame = -1

Query: 884 SSYPQSSMPLTSGMPQPQPTG----------PSPGVSFSSPYTYAPSSFGLXXXXXXXXX 735
           S YPQ+S P+TS +P  QP            PS  VS  S Y + PSS            
Sbjct: 43  SLYPQASGPITSSIPLTQPVAFASSYFFQGLPSSNVSIPS-YQFQPSSH----------- 90

Query: 734 XXXXXXXXXXXPGPAGAQPWLHSSQSTPVVAPLQQAFPTSATVPAVNGSSTA-QTASDWQ 558
                          G QPWL SSQ+  V  PLQQ   +  +V A NGS+ + Q ASDW 
Sbjct: 91  -------LPVHATSTGVQPWLLSSQTAAV--PLQQNISSPGSVQAANGSNASYQAASDWL 141

Query: 557 EYEAADGRRYYYNKITKQSSWEKPAELMTPLERADASTVWKEFTTPEGRKYYYNKETKQS 378
           EYEAADGRRYYYNKITK SSWEKP ELMTPLERADASTVWKEF+TPEG+KYYYNKETK+S
Sbjct: 142 EYEAADGRRYYYNKITKVSSWEKPLELMTPLERADASTVWKEFSTPEGKKYYYNKETKES 201

Query: 377 KWTIPDELKLAREQAEKAASGGAHSEMNT--TVPTTARGSSVEQP--SPTVNLASSTTS 213
           KWTIPDELKLARE AEKAA+ G   ++NT  TV  T  G+  E+P  SPTV+ + S ++
Sbjct: 202 KWTIPDELKLARELAEKAAAEGLLPQINTSSTVSATTDGTFTEKPSASPTVSASPSLSA 260


>ref|XP_002320019.2| FF domain-containing family protein [Populus trichocarpa]
            gi|550323102|gb|EEE98334.2| FF domain-containing family
            protein [Populus trichocarpa]
          Length = 1019

 Score =  219 bits (557), Expect = 2e-54
 Identities = 146/342 (42%), Positives = 179/342 (52%), Gaps = 27/342 (7%)
 Frame = -1

Query: 1163 MASNPPPSGSQWPHPASGSMAPQGFNSPYPMQFRPAAQAPQGQPFNPPQASQQFHPAGQS 984
            MASNP  SG Q                     FRP     QGQPF    ASQQF P GQ 
Sbjct: 1    MASNPQSSGGQ---------------------FRPMVPTQQGQPFIQV-ASQQFRPVGQG 38

Query: 983  Q--NHM-MXXXXXXXXXXXXXXXXXXPRPTQTGHAPSS------YPQSSMPLTSGMPQPQ 831
               +H+ M                  P P Q G APS+      Y Q + PLTS   QPQ
Sbjct: 39   MPSSHVGMPAAQSQHLQFSQPIQQLPPWPNQPG-APSAQALSMPYGQLNRPLTSS--QPQ 95

Query: 830  PTGP----------SPGVSFSSPYTYAPSSFGLXXXXXXXXXXXXXXXXXXXXPGPAGAQ 681
               P          + GV  SSPY +APSSFGL                      P G Q
Sbjct: 96   QNAPPLSNHMHVVGTSGVPNSSPYAFAPSSFGLTQNSASALPQFPPMSQMHAHVVPMGGQ 155

Query: 680  PWL----HSSQSTPVVAP--LQQAFPTSATVPAVNGSSTAQTASDWQEYEAADGRRYYYN 519
            PWL    H +   P V P  +Q +  +S+       S++ Q+ SDWQE+ A+DGRRYYYN
Sbjct: 156  PWLSSGSHGASLVPPVQPAVVQPSISSSSDSTVAVSSNSQQSLSDWQEHTASDGRRYYYN 215

Query: 518  KITKQSSWEKPAELMTPLERADASTVWKEFTTPEGRKYYYNKETKQSKWTIPDELKLARE 339
            + TKQSSW+KP ELMTP+ERADASTVWKEFTT EG+KYYYNK TKQSKW+IP+ELK+ARE
Sbjct: 216  RRTKQSSWDKPFELMTPIERADASTVWKEFTTQEGKKYYYNKVTKQSKWSIPEELKMARE 275

Query: 338  QAEKAASGGAHSEMN--TTVPTTARGSSVEQPSPTVNLASST 219
            QA++    G  SE +  + VPT    +S E  +  V+++SS+
Sbjct: 276  QAQQTVGQGNQSETDAASNVPTAVAVTSSETSTTAVSVSSSS 317


>ref|XP_006393693.1| hypothetical protein EUTSA_v10011212mg [Eutrema salsugineum]
            gi|557090271|gb|ESQ30979.1| hypothetical protein
            EUTSA_v10011212mg [Eutrema salsugineum]
          Length = 958

 Score =  216 bits (551), Expect = 1e-53
 Identities = 134/300 (44%), Positives = 166/300 (55%), Gaps = 11/300 (3%)
 Frame = -1

Query: 1076 PMQFRPAAQAPQGQPFNPPQASQQFHPAGQSQNHMMXXXXXXXXXXXXXXXXXXPRPTQT 897
            P QFRP A  PQGQ F P  +    HP G    ++                    RP Q 
Sbjct: 11   PQQFRPMAPGPQGQHFVPAASQPFHHPFGHVPTNVQSQPPQFSQPIQQLFPV---RPGQP 67

Query: 896  GHAPSSYPQSSMPLTSGMPQPQPTGP------SPGVSFSSPYTYAPSSFGLXXXXXXXXX 735
            GH  SS    S P+ +   QPQP  P      + G  FSS YT+ P S+G          
Sbjct: 68   GHITSS----SQPVAAPYIQPQPNAPPMTGFGTSGPPFSSSYTFVPPSYGQQQPPSMVQP 123

Query: 734  XXXXXXXXXXXPGPAGAQPWLHS-SQSTPVVAPLQQAFP-TSATVPA-VNGSSTAQTASD 564
                         P  A  W    +QST +V+P+QQ    T  T+P    GS T Q+ASD
Sbjct: 124  TSQMHAAGV----PPAANSWAAPVNQSTTLVSPVQQTGQQTPVTLPTDPQGSLTPQSASD 179

Query: 563  WQEYEAADGRRYYYNKITKQSSWEKPAELMTPLERADASTVWKEFTTPEGRKYYYNKETK 384
            WQE+++ADGR+YYYNK TKQSSWEKP ELMTPLERADASTVWKEFTT EGRKYYYNK TK
Sbjct: 180  WQEHKSADGRKYYYNKQTKQSSWEKPLELMTPLERADASTVWKEFTTAEGRKYYYNKVTK 239

Query: 383  QSKWTIPDELKLAREQAEKAASGGAHSEMNTTVPT--TARGSSVEQPSPTVNLASSTTST 210
            +SKWTIP++LKLAREQAE A++  + S   +T  +  +A  S +   +   ++  ST+ST
Sbjct: 240  ESKWTIPEDLKLAREQAELASAKTSFSGAGSTPVSHMSASSSDLAVSTTVTSVVPSTSST 299


>ref|NP_175113.2| pre-mRNA-processing protein 40A [Arabidopsis thaliana]
            gi|395406802|sp|B6EUA9.1|PR40A_ARATH RecName:
            Full=Pre-mRNA-processing protein 40A; AltName:
            Full=Mediator of RNA polymerase II transcription subunit
            35a gi|332193941|gb|AEE32062.1| pre-mRNA-processing
            protein 40A [Arabidopsis thaliana]
          Length = 958

 Score =  216 bits (551), Expect = 1e-53
 Identities = 144/333 (43%), Positives = 176/333 (52%), Gaps = 15/333 (4%)
 Frame = -1

Query: 1163 MASNPPPSGSQWPHPASGSMAPQGFNSPYPMQFRPAAQAPQGQPFNPPQASQQFHPAGQS 984
            MA+NPP S        SG+            QFRP     QGQ F  P ASQ FHP G  
Sbjct: 1    MANNPPQS--------SGT------------QFRPMVPGQQGQHF-VPAASQPFHPYGHV 39

Query: 983  QNHMMXXXXXXXXXXXXXXXXXXPRPTQTGHAPSS-------YPQSSMPLTSGMPQPQPT 825
              ++                    RP Q  H  SS       Y Q++  LTSG  QPQP 
Sbjct: 40   PPNVQSQPPQYSQPIQQQQLFPV-RPGQPVHITSSSQAVSVPYIQTNKILTSGSTQPQPN 98

Query: 824  GP------SPGVSFSSPYTYAPSSFGLXXXXXXXXXXXXXXXXXXXXPGPAGAQPW-LHS 666
             P      + G  FSSPYT+ PSS+                        P  A  W +  
Sbjct: 99   APPMTGFATSGPPFSSPYTFVPSSYPQQQPTSLVQPNSQMHVAGV----PPAANTWPVPV 154

Query: 665  SQSTPVVAPLQQAFP-TSATVPAVNGSSTAQTASDWQEYEAADGRRYYYNKITKQSSWEK 489
            +QST +V+P+QQ    T   V    G+ T Q+ASDWQE+ +ADGR+YYYNK TKQS+WEK
Sbjct: 155  NQSTSLVSPVQQTGQQTPVAVSTDPGNLTPQSASDWQEHTSADGRKYYYNKRTKQSNWEK 214

Query: 488  PAELMTPLERADASTVWKEFTTPEGRKYYYNKETKQSKWTIPDELKLAREQAEKAASGGA 309
            P ELMTPLERADASTVWKEFTTPEG+KYYYNK TK+SKWTIP++LKLAREQA+ A+   +
Sbjct: 215  PLELMTPLERADASTVWKEFTTPEGKKYYYNKVTKESKWTIPEDLKLAREQAQLASEKTS 274

Query: 308  HSEMNTTVPTTARGSSVEQPSPTVNLASSTTST 210
             SE  +T  +    SS +    TV     +TS+
Sbjct: 275  LSEAGSTPLSHHAASSSDLAVSTVTSVVPSTSS 307