BLASTX nr result
ID: Rehmannia25_contig00009451
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00009451
(2126 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora] 611 e-172
emb|CBI17549.3| unnamed protein product [Vitis vinifera] 550 e-154
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s... 540 e-150
ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III s... 536 e-149
ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III s... 532 e-148
ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III s... 530 e-147
ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Popu... 519 e-144
gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theo... 518 e-144
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin... 514 e-143
gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata] 513 e-142
ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III s... 512 e-142
ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 511 e-142
gb|EOX91149.1| Transcription regulators,zinc ion binding, putati... 504 e-140
gb|EOX91150.1| Transcription regulators,zinc ion binding, putati... 502 e-139
ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citr... 498 e-138
ref|XP_004232385.1| PREDICTED: uncharacterized protein LOC101252... 474 e-131
ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5... 470 e-130
ref|XP_006590438.1| PREDICTED: DNA-directed RNA polymerase III s... 468 e-129
gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Mor... 460 e-126
gb|ABU45208.1| unknown [Solanum bulbocastanum] 456 e-125
>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
Length = 643
Score = 611 bits (1575), Expect = e-172
Identities = 325/586 (55%), Positives = 400/586 (68%), Gaps = 6/586 (1%)
Frame = -1
Query: 2120 EPEDEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDL 1941
E EDE+VREIDVY +P +DP T+LYVLQYPLR WRPYELD RCEEVRVK S EVE+DL
Sbjct: 102 EGEDEIVREIDVYLTPSIDPNTKLYVLQYPLRPLWRPYELDDRCEEVRVKCKSAEVEVDL 161
Query: 1940 TVYVDSKNYDSGADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLYLNPIHTVVQLRPL 1761
V VDSKNYDS ADPRV M KQ LT+SW+P +GYAVGVL GNKL+LNPIH VVQLRP
Sbjct: 162 AVDVDSKNYDSDADPRVSMTKQTLTSSWKPPVTAGYAVGVLVGNKLHLNPIHAVVQLRPS 221
Query: 1760 MEHVDSKESKSKSVGPSNVNDTVKSEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYH 1581
M+H + SK ++ SN+ D K EE G EQ KD+ EDW+PL YH
Sbjct: 222 MQHYKPESSKRRTTASSNLEDNTKGEEVTTGSLKKQGKPSGPVIEQNKDTREDWIPLNYH 281
Query: 1580 GASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLK 1401
GA SD++ Y++KM+ + S I FSM ++DY+N+LCPGTS++ S GPS RVLL+LPL+
Sbjct: 282 GARSDISMSYVRKMVEHDSSHIQFSM-NHDYVNTLCPGTSNENNGSNGPS-RVLLSLPLE 339
Query: 1400 ERFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGI 1221
ERFRTWLLQGPP+HRFDALKHL D SVE++L VL HA++VQGLW+PKSSL+YG DQGI
Sbjct: 340 ERFRTWLLQGPPIHRFDALKHLAPDASVEDILAVLSQHAQLVQGLWIPKSSLLYGKDQGI 399
Query: 1220 KVLARDYVLLLFSKNVIIKDSQLP-NNKLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSF 1044
LARDYVLLLFS+ II +SQLP KL AM+DVL+ +A +R + DWK KE PD +F
Sbjct: 400 DALARDYVLLLFSRTPIINNSQLPQQQKLNRAMRDVLDTVAFERVSLNDWKFKEPPDMTF 459
Query: 1043 VKSNPSVVKKQXXXXXXXEKIINDTI-GGRNGPGKKSD----TTTNPATSKSSSKVTART 879
+K NP +V++Q EK+I + I G +N P K+ TT NPATSKS SK + +
Sbjct: 460 IKLNPKIVREQEQTWERLEKLITEKIFGDKNRPATKNSSRPLTTNNPATSKSLSKHASNS 519
Query: 878 PKVANSRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAV 699
R MSEE REA+ KALQKLF+S K+C FQQI Q LR+MAVSES+R GFAREA+
Sbjct: 520 LNAGVPRRPMSEETREALPKALQKLFQSHKVC-FQQICQRLREMAVSESSRPKGFAREAI 578
Query: 698 VAANSIDAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLK 519
AA+ ++A P+ELQ II+QVA+NIHG+ V KSSP +P++D F
Sbjct: 579 AAAHGVEAPPEELQAIISQVAINIHGVYVLKSSPVHPEHDEF------------------ 620
Query: 518 KATILEASKMELKREISQIEYQKVLQELCLSQGSAWILRSAGGNTK 381
V+QELC+SQGSAW+L+S GN K
Sbjct: 621 -----------------------VVQELCVSQGSAWVLKSGDGNPK 643
>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 550 bits (1417), Expect = e-154
Identities = 305/591 (51%), Positives = 388/591 (65%), Gaps = 13/591 (2%)
Frame = -1
Query: 2114 EDEVVREIDVYFSPC-VDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLT 1938
ED VVREIDV+F+P D T++YVLQYPLR WRPYEL +RC+EVRVKPAS EVE+DL+
Sbjct: 99 EDPVVREIDVFFTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLS 158
Query: 1937 VYVDSKNYDSGADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLYLNPIHTVVQLRPLM 1758
+ VDSKNYD A +MKKQ L+TSW+P +GY VGVL GNKL+LNPIH VVQLRP M
Sbjct: 159 IDVDSKNYDPDAPNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSM 218
Query: 1757 EHVDSKESKSKSVGPSNVNDTVK----SEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPL 1590
E++ S +K K+ + N VK +EE G EQ D+ E WVPL
Sbjct: 219 EYLSSGGAKRKNNVTGDTNSAVKLEVSNEEESVGSLKKQNKIMGILDEQNTDAAESWVPL 278
Query: 1589 KYHGASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLC-PGTSSDGFSSKGPSIRVLLT 1413
KYH + SD + RYLQKM+A + S I F MS +Y+NSLC PG S+D SKG S R LL+
Sbjct: 279 KYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLS 338
Query: 1412 LPLKERFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGT 1233
+PL+ERF+T L +GPPVHRF ALKH D SVE+VL VL HA +VQGLWVPKSSL++
Sbjct: 339 MPLEERFKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPG 398
Query: 1232 DQGIKVLARDYVLLLFSKNVIIKDSQLP-NNKLAPAMKDVLNVLAVKRDNFKDWKLKELP 1056
QG+ LARDY+LLLFSK +I SQ+ L A+K L++LAV+R +F+DWK KE
Sbjct: 399 GQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPT 458
Query: 1055 DFSFVKSNPSVVKKQXXXXXXXEKIINDTI--GGRNGP----GKKSDTTTNPATSKSSSK 894
D SF+K +P +V++Q EK I D I GGR GP K TS S
Sbjct: 459 DVSFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTGTSTKSDG 518
Query: 893 VTARTPKVANSRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGF 714
T T RTAMS E REA+ KAL+++F+ K+CSFQ I Q LRD+AVS+S
Sbjct: 519 ATRATNGTPVRRTAMSAETREALPKALEEVFRLHKVCSFQLICQALRDLAVSKSTSPKVD 578
Query: 713 AREAVVAANSIDAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVP 534
R V AA DA +EL II++ A +HG+ V K+S ++ +++P RKVV+DLF + P
Sbjct: 579 PRTFVAAAYGADAPQEELHAIISKYATTVHGVYVWKTS-EHSEHNPLRKVVVDLFCGKEP 637
Query: 533 NAKLKKATILEASKMELKREISQIEYQKVLQELCLSQGSAWILRSAGGNTK 381
NAKLK+A I+EA+K+ LK+EI+ EY KV+ ELC S+GS W+L+S G K
Sbjct: 638 NAKLKRADIMEAAKIALKKEITTHEYNKVVSELCESRGSLWVLKSGDGKPK 688
>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
vinifera]
Length = 672
Score = 540 bits (1390), Expect = e-150
Identities = 302/589 (51%), Positives = 387/589 (65%), Gaps = 11/589 (1%)
Frame = -1
Query: 2114 EDEVVREIDVYFSPC-VDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLT 1938
ED VVREIDV+F+P D T++YVLQYPLR WRPYEL +RC+EVRVKPAS EVE+DL+
Sbjct: 99 EDPVVREIDVFFTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLS 158
Query: 1937 VYVDSKNYDSGADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLYLNPIHTVVQLRPLM 1758
+ VDSKNYD A +MKKQ L+TSW+P +GY VGVL GNKL+LNPIH VVQLRP M
Sbjct: 159 IDVDSKNYDPDAPNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSM 218
Query: 1757 EHVDSKESKSKSVGPSNVNDTVKSEEPQEGXXXXXXXXXXXXSEQTKDS--EEDWVPLKY 1584
E++ S +K K+ + N VK E E E++ S ++ WVPLKY
Sbjct: 219 EYLSSGGAKRKNNVTGDTNSAVKLEVSNE--------------EESVGSLKKQSWVPLKY 264
Query: 1583 HGASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLC-PGTSSDGFSSKGPSIRVLLTLP 1407
H + SD + RYLQKM+A + S I F MS +Y+NSLC PG S+D SKG S R LL++P
Sbjct: 265 HSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMP 324
Query: 1406 LKERFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQ 1227
L+ERF+T L +GPPVHRF ALKH D SVE+VL VL HA +VQGLWVPKSSL++ Q
Sbjct: 325 LEERFKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQ 384
Query: 1226 GIKVLARDYVLLLFSKNVIIKDSQLP-NNKLAPAMKDVLNVLAVKRDNFKDWKLKELPDF 1050
G+ LARDY+LLLFSK +I SQ+ L A+K L++LAV+R +F+DWK KE D
Sbjct: 385 GVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDV 444
Query: 1049 SFVKSNPSVVKKQXXXXXXXEKIINDTI--GGRNGP----GKKSDTTTNPATSKSSSKVT 888
SF+K +P +V++Q EK I D I GGR GP K TS S T
Sbjct: 445 SFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTGTSTKSDGAT 504
Query: 887 ARTPKVANSRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAR 708
T RTAMS E REA+ KAL+++F+ K+CSFQ I Q LRD+AVS+S R
Sbjct: 505 RATNGTPVRRTAMSAETREALPKALEEVFRLHKVCSFQLICQALRDLAVSKSTSPKVDPR 564
Query: 707 EAVVAANSIDAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNA 528
V AA DA +EL II++ A +HG+ V K+S ++ +++P RKVV+DLF + PNA
Sbjct: 565 TFVAAAYGADAPQEELHAIISKYATTVHGVYVWKTS-EHSEHNPLRKVVVDLFCGKEPNA 623
Query: 527 KLKKATILEASKMELKREISQIEYQKVLQELCLSQGSAWILRSAGGNTK 381
KLK+A I+EA+K+ LK+EI+ EY KV+ ELC S+GS W+L+S G K
Sbjct: 624 KLKRADIMEAAKIALKKEITTHEYNKVVSELCESRGSLWVLKSGDGKPK 672
>ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
X1 [Solanum tuberosum]
Length = 669
Score = 536 bits (1381), Expect = e-149
Identities = 294/582 (50%), Positives = 390/582 (67%), Gaps = 8/582 (1%)
Frame = -1
Query: 2111 DEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVY 1932
DEVVREIDV +P DP T+LYV QYPLR WRPYEL++RC+EVR++P++ E+E+DL +
Sbjct: 92 DEVVREIDVCINPSFDPSTQLYVFQYPLRAVWRPYELEERCQEVRLRPSTAEMEVDLAID 151
Query: 1931 VDSKNYDSGADPRVQMKKQILTTSWEP--SHVSGYAVGVLTGNKLYLNPIHTVVQLRPLM 1758
+DSKN+D + +KKQ+L+TSW P + SGYAVGVL G+KL+LNP+H VVQLRP
Sbjct: 152 LDSKNFDRDSVHAATIKKQMLSTSWMPLPTCASGYAVGVLIGDKLHLNPVHAVVQLRPSK 211
Query: 1757 EHVDSKESKSKSVGPSNVNDTVKSEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYHG 1578
++ E K K+V +N +V++E+ +E KD E W+ LKYHG
Sbjct: 212 RNLKESELK-KNVTTNNDEKSVENEDVKEKRPMGPSKKQNKPPGIEKDIGEHWLHLKYHG 270
Query: 1577 ASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKE 1398
A SD++ RYLQKM E S + FSMS DYLN+ PG +D K R L LPL+E
Sbjct: 271 ARSDISARYLQKMAMEEGSPVPFSMSPVDYLNAFFPGRPTDTDRLKILRTR-LSQLPLEE 329
Query: 1397 RFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIK 1218
R RTWLL+GPP+HRFDALKHL D S +E++RVLQ +A++VQGLWVPKSSLVYGT+ G++
Sbjct: 330 RVRTWLLEGPPIHRFDALKHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVE 389
Query: 1217 VLARDYVLLLFSKNVIIKDSQLPNN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFV 1041
VLAR++VL F+K ++IK S + A L LAV+R + DWKLKE PD F
Sbjct: 390 VLARNFVLYEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFE 449
Query: 1040 KSNPSVVKKQXXXXXXXEKIINDTI-GGRNGPGKKSDTTTNPATSKSSSKVTARTPKVAN 864
VV+++ K IND + GGRN P T NP + K +
Sbjct: 450 NLYGDVVREKQATWECLGKQINDVLPGGRNRP-----TMKNPLNPNADIPALPSGDKPTS 504
Query: 863 S---RTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVA 693
S RT+MSEE+REA+ KALQ++F++ K+CSFQQI Q LR + VS+S G R+A+ A
Sbjct: 505 SSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPRKAITA 564
Query: 692 ANSI-DAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKK 516
+ + DA +E+Q +INQVAVNIHG+ V KSSPDNPQYD RKVVIDLF+AE P+AKLKK
Sbjct: 565 SIDVFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKVVIDLFMAEGPSAKLKK 624
Query: 515 ATILEASKMELKREISQIEYQKVLQELCLSQGSAWILRSAGG 390
A++ EA+K++L R+I+ +E+ KV++ELC S+ SAW+LRS G
Sbjct: 625 ASVTEAAKLQLNRDITNVEFLKVMKELCHSEKSAWVLRSGDG 666
>ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Solanum
lycopersicum]
Length = 669
Score = 532 bits (1370), Expect = e-148
Identities = 290/585 (49%), Positives = 390/585 (66%), Gaps = 11/585 (1%)
Frame = -1
Query: 2111 DEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVY 1932
DE+VREIDV +P DP T+LYV QYPL+ WRPYEL++RC+EVR++P++ E+E+DL +
Sbjct: 92 DEIVREIDVCINPSFDPSTQLYVFQYPLKAVWRPYELEERCQEVRLRPSTAEMEVDLAID 151
Query: 1931 VDSKNYDSGADPRVQMKKQILTTSWEP--SHVSGYAVGVLTGNKLYLNPIHTVVQLRPLM 1758
+DSKN+D + +KKQ+L+TSW P + SGYAVGVL G+KL+LNP+H VVQLRP
Sbjct: 152 LDSKNFDRDSVHAATVKKQMLSTSWIPLPTCTSGYAVGVLIGDKLHLNPVHAVVQLRPSK 211
Query: 1757 EHVDSKESKSKSVGPSNVNDTVKSEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYHG 1578
++ E K K++ +N +V++E+ +E KD E W+ LKYHG
Sbjct: 212 RNLKESELK-KNIITNNDEKSVENEDVKEKRPVGPSKKQNKSPGIEKDIGEHWLHLKYHG 270
Query: 1577 ASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKE 1398
A SD++ RYLQKM E S + FSMS DYLN+ CPG +D K R L LPL+E
Sbjct: 271 ARSDISARYLQKMSMEEGSPVPFSMSPVDYLNAFCPGRPTDTDRLKILRTR-LSQLPLEE 329
Query: 1397 RFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIK 1218
R R WLL+GPP+HRFDAL HL D S +E++RVLQ +A++VQGLWVPKSSLVYGT+ G++
Sbjct: 330 RVRIWLLEGPPIHRFDALMHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVE 389
Query: 1217 VLARDYVLLLFSKNVIIKDSQLPNN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFV 1041
VLAR++VL F+K ++IK S + A L LAV+R + DWKLKE PD F
Sbjct: 390 VLARNFVLYEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFE 449
Query: 1040 KSNPSVVKKQXXXXXXXEKIINDTI-GGRNGPGKKS------DTTTNPATSKSSSKVTAR 882
VV++Q K IND + GGR P K+ D T P+ K +S R
Sbjct: 450 NLYGDVVREQQATWECLGKQINDVLPGGRTRPTMKNPINRNADITALPSGDKPTSSSLLR 509
Query: 881 TPKVANSRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREA 702
T +MSEE+REA+ KALQ++F++ K+CSFQQI Q LR + VS+S G R+A
Sbjct: 510 T--------SMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPRKA 561
Query: 701 VVAANSI-DAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAK 525
+ A+ + DA +E+Q +INQVAVNIHG+ V KSSPDNPQYD RK+VIDLF+AE P+AK
Sbjct: 562 ITASVDVFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKIVIDLFMAEGPSAK 621
Query: 524 LKKATILEASKMELKREISQIEYQKVLQELCLSQGSAWILRSAGG 390
LKKA++ EA+K++L R+I+ +E+ KV++ELC S+ SAW+LRS G
Sbjct: 622 LKKASVTEAAKLQLNRDITNVEFLKVMKELCHSEKSAWVLRSGDG 666
>ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
X2 [Solanum tuberosum]
Length = 657
Score = 530 bits (1364), Expect = e-147
Identities = 291/582 (50%), Positives = 389/582 (66%), Gaps = 8/582 (1%)
Frame = -1
Query: 2111 DEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVY 1932
DEVVREIDV +P DP T+LYV QYPLR WRPYEL++RC+EVR++P++ E+E+DL +
Sbjct: 92 DEVVREIDVCINPSFDPSTQLYVFQYPLRAVWRPYELEERCQEVRLRPSTAEMEVDLAID 151
Query: 1931 VDSKNYDSGADPRVQMKKQILTTSWEP--SHVSGYAVGVLTGNKLYLNPIHTVVQLRPLM 1758
+DSKN+D + +KKQ+L+TSW P + SGYAVGVL G+KL+LNP+H VVQLRP
Sbjct: 152 LDSKNFDRDSVHAATIKKQMLSTSWMPLPTCASGYAVGVLIGDKLHLNPVHAVVQLRPSK 211
Query: 1757 EHVDSKESKSKSVGPSNVNDTVKSEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYHG 1578
++ E K K+V +N +V++E+ +E ++ W+ LKYHG
Sbjct: 212 RNLKESELK-KNVTTNNDEKSVENEDVKE------------KRPMGPSKKQHWLHLKYHG 258
Query: 1577 ASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKE 1398
A SD++ RYLQKM E S + FSMS DYLN+ PG +D K R L LPL+E
Sbjct: 259 ARSDISARYLQKMAMEEGSPVPFSMSPVDYLNAFFPGRPTDTDRLKILRTR-LSQLPLEE 317
Query: 1397 RFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIK 1218
R RTWLL+GPP+HRFDALKHL D S +E++RVLQ +A++VQGLWVPKSSLVYGT+ G++
Sbjct: 318 RVRTWLLEGPPIHRFDALKHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVE 377
Query: 1217 VLARDYVLLLFSKNVIIKDSQLPNN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFV 1041
VLAR++VL F+K ++IK S + A L LAV+R + DWKLKE PD F
Sbjct: 378 VLARNFVLYEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFE 437
Query: 1040 KSNPSVVKKQXXXXXXXEKIINDTI-GGRNGPGKKSDTTTNPATSKSSSKVTARTPKVAN 864
VV+++ K IND + GGRN P T NP + K +
Sbjct: 438 NLYGDVVREKQATWECLGKQINDVLPGGRNRP-----TMKNPLNPNADIPALPSGDKPTS 492
Query: 863 S---RTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVA 693
S RT+MSEE+REA+ KALQ++F++ K+CSFQQI Q LR + VS+S G R+A+ A
Sbjct: 493 SSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPRKAITA 552
Query: 692 ANSI-DAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKK 516
+ + DA +E+Q +INQVAVNIHG+ V KSSPDNPQYD RKVVIDLF+AE P+AKLKK
Sbjct: 553 SIDVFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKVVIDLFMAEGPSAKLKK 612
Query: 515 ATILEASKMELKREISQIEYQKVLQELCLSQGSAWILRSAGG 390
A++ EA+K++L R+I+ +E+ KV++ELC S+ SAW+LRS G
Sbjct: 613 ASVTEAAKLQLNRDITNVEFLKVMKELCHSEKSAWVLRSGDG 654
>ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Populus trichocarpa]
gi|550334731|gb|EEE90658.2| hypothetical protein
POPTR_0007s12540g [Populus trichocarpa]
Length = 667
Score = 519 bits (1336), Expect = e-144
Identities = 282/585 (48%), Positives = 381/585 (65%), Gaps = 6/585 (1%)
Frame = -1
Query: 2126 EVEPEDEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEI 1947
E + +D VVREIDVY++P VDP T+LYV+QYPLR WRPYELD+RC+EVRVKP S EVE+
Sbjct: 104 EEDEDDVVVREIDVYYTPSVDPNTQLYVMQYPLRPCWRPYELDERCKEVRVKPESTEVEV 163
Query: 1946 DLTVYVDSKNYDSGADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLYLNPIHTVVQLR 1767
DL++ D+KNYD R+ MKKQ L++SW P +GYAVGVL GNKL+LNPIH VVQLR
Sbjct: 164 DLSID-DTKNYDPDIASRLNMKKQTLSSSWSPPPATGYAVGVLIGNKLHLNPIHAVVQLR 222
Query: 1766 PLMEHVDSKESKSKSVGPSNVNDTVKSEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLK 1587
P M+++ S SK K S + +E G +EQ D EE W+PLK
Sbjct: 223 PSMDYLSSGNSKGKKNATSGEDS---NEGKPLGLPKKQSKQMSSGNEQKPDVEESWIPLK 279
Query: 1586 YHGASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLP 1407
YHG+ SDL+ RYLQ M+A E S I F+M+ DY++SLCPG S++ GPS RVLL+LP
Sbjct: 280 YHGSKSDLSSRYLQNMVAPESSTIEFAMNPYDYMSSLCPGISNNNIKLNGPSRRVLLSLP 339
Query: 1406 LKERFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGT-- 1233
L+ER + L+GPP+HRF AL+HLI ++S+E++L VLQ++ ++VQGLWVPK+SL++
Sbjct: 340 LEERIKRLFLEGPPIHRFAALRHLIPNDSIEDLLIVLQEYGQLVQGLWVPKTSLLFPNPK 399
Query: 1232 -DQGIKVLARDYVLLLFSKNVIIKDSQLPNNKLAPAMKDVLNVLAVKRDNFKDWKLKELP 1056
+ +K+ ARDY+LLLFSK++++ S+L +K LN+ AV+R +FKDWK KE
Sbjct: 400 PTEKVKLAARDYILLLFSKSLVVTPSELNVPMKPLILKSFLNIFAVERPSFKDWKFKENV 459
Query: 1055 DFSFVKSNPSVVKKQXXXXXXXEKIINDTIGGRNGPGKKSDTTTNPATSKSSSKVTARTP 876
D FV+ P +V+KQ K I+ KS SK P
Sbjct: 460 DTLFVELYPDIVRKQEQAWEVMGKNISAAF---------------DRAGKSVSKNVITKP 504
Query: 875 KVANSRTAMSEEVREAITKALQKLFKSVKIC--SFQQISQLLRDMAVSESARSTGFAREA 702
K M++E REA+ KAL K+ ++ K+C FQ I Q LR +A+S+S R A
Sbjct: 505 K-----KTMTDETREALRKALPKVLQTHKVCRYGFQMICQGLRQLAISQSTLPKADPRIA 559
Query: 701 VVAANSIDAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPF-RKVVIDLFVAEVPNAK 525
V AA+ +A P+ELQ +I++VA NIHG V KSSP++P +DP RKVVI LF+A PNA
Sbjct: 560 VAAASGAEAPPEELQEVISEVATNIHGFYVLKSSPEHPDFDPLSRKVVIGLFLARGPNAN 619
Query: 524 LKKATILEASKMELKREISQIEYQKVLQELCLSQGSAWILRSAGG 390
+KK+ + A+++ELKRE S EY KV+ +LC S+GSAW+L+S G
Sbjct: 620 IKKSEVQAAARLELKREPSNSEYIKVMTDLCESKGSAWVLKSGDG 664
>gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
Length = 700
Score = 518 bits (1335), Expect = e-144
Identities = 290/589 (49%), Positives = 384/589 (65%), Gaps = 12/589 (2%)
Frame = -1
Query: 2120 EPEDEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDL 1941
E ED VVREIDV+F+P +D T+LYVLQYPLR WRPYELD+RCEEVRVKPAS EVE+DL
Sbjct: 116 EEEDMVVREIDVFFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDL 175
Query: 1940 TVYVDSKNYDSGADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLYLNPIHTVVQLRPL 1761
V VDS NYDS R++M KQ L++SW P +GYAVGVL G+KL+LNPIH VVQLRP
Sbjct: 176 AVDVDSNNYDSERASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPS 235
Query: 1760 MEHVDSKESKSKSVGPSNVNDTVKSEEPQE----GXXXXXXXXXXXXSEQTKDSEEDWVP 1593
M H+ SK K+ ++ TVK EEP + G +EQ D +E WVP
Sbjct: 236 MCHLKPSVSKRKNAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVP 295
Query: 1592 LKYHGASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLT 1413
LKYH + +D + +YLQ+MMA E +I F+MS DY++SLCPG S++ ++GPS R+LL+
Sbjct: 296 LKYHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNN-KAQGPSRRLLLS 354
Query: 1412 LPLKERFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGT 1233
+PL+ER + L +GPP HRF ALKH D S+E++ VLQ HA +VQGLWVPKSSL++
Sbjct: 355 IPLEERLKKLLSEGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPE 414
Query: 1232 DQGIKVLARDYVLLLFSKNVIIKDSQLPNNKLAPAMKD----VLNVLAVKRDNFKDWKLK 1065
D K LARDYVLLLFSKN II +Q+ + L+P+ K+ L +LA++R +FKDWKLK
Sbjct: 415 DP-YKSLARDYVLLLFSKNPIISLAQV--HALSPSRKEEVKGFLKILAIERPSFKDWKLK 471
Query: 1064 ELPDFSFVKSNPSVVKKQXXXXXXXEKIINDTI--GGRNGPGK-KSDTTTNPATSKSSSK 894
E D F K P +VK Q E + + I G + GP + K T P + +S K
Sbjct: 472 ENADEGFKKLYPDIVKNQEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEKAMNSDK 531
Query: 893 VTARTPKVANSRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGF 714
R + MS+E REAI KAL+K+F++ K+CS Q I + LRD+A+S+S
Sbjct: 532 GVRRVAPAVQAGRTMSDETREAIPKALKKVFQTHKVCSLQLIRKGLRDLALSQSTLPKAD 591
Query: 713 AREAVVAANSIDAYPDELQTIINQVAVNIH-GICVPKSSPDNPQYDPFRKVVIDLFVAEV 537
AR V AA DA ELQ ++++VAV +H G+ V +SSP++P+YDP R+VVI+L +
Sbjct: 592 ARMVVKAAYGADAPEHELQEVVSEVAVELHGGLFVLRSSPEHPEYDPLREVVINLLRVK- 650
Query: 536 PNAKLKKATILEASKMELKREISQIEYQKVLQELCLSQGSAWILRSAGG 390
KLKKA + A+ + LKREIS EY KV+ + C + S W+L+S G
Sbjct: 651 --GKLKKADVSAAALLSLKREISNNEYNKVMSDFCEYKSSWWVLKSGDG 697
>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
putative [Ricinus communis]
Length = 677
Score = 514 bits (1325), Expect = e-143
Identities = 282/569 (49%), Positives = 376/569 (66%), Gaps = 9/569 (1%)
Frame = -1
Query: 2126 EVEPEDEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEI 1947
E E ED +VREIDV+F+P +D T+LYV+QYPLR WRPYELD+RCEEVRVKP S EVE+
Sbjct: 110 EEEEEDMIVREIDVFFTPSIDSATQLYVMQYPLRPCWRPYELDERCEEVRVKPQSTEVEV 169
Query: 1946 DLTVYVDSKNYDSGADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLYLNPIHTVVQLR 1767
DLT+ DS N+D + KKQ L+TS+ P V+GYAVGVL GNKL+LNPIH VVQLR
Sbjct: 170 DLTID-DSSNWDPAQASKYNFKKQTLSTSFMPPRVTGYAVGVLIGNKLHLNPIHAVVQLR 228
Query: 1766 PLMEHVDSKESKSKSVGPSNVNDTVKSEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLK 1587
P +EHV+S +SK K+ + +N VK E+ EG ++ W+ LK
Sbjct: 229 PSLEHVNSNDSKRKN--SATLNPEVKLEDSNEGKPIG------------SSKKQCWISLK 274
Query: 1586 YHGASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLP 1407
YHG+ SD + RYL+KM+A+E S + F+M+ DY++SLCP S++ SKGP R LL+LP
Sbjct: 275 YHGSKSDFSSRYLEKMIAQESSPMEFTMTPYDYMSSLCPVASNEKTKSKGPPRRFLLSLP 334
Query: 1406 LKERFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQ 1227
L ER + +L+GPPV RF LKH D+SVE+VL+VLQ++ ++VQGLW PKSSL++ D
Sbjct: 335 LAERLKKLILEGPPVQRFSVLKHFAPDDSVEDVLKVLQEYGQLVQGLWAPKSSLLF-PDA 393
Query: 1226 GIKVLARDYVLLLFSKNVIIKDSQLPNN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDF 1050
K RDYVLLLFSKN++I SQ+ K+ +K LN+ AV+R +FKDWK KE D
Sbjct: 394 NSKQGIRDYVLLLFSKNLVINSSQVNFPVKIKEEIKSFLNLFAVERPSFKDWKFKEHTDT 453
Query: 1049 SFVKSNPSVVKKQXXXXXXXEKIINDTIGGRNGPGKKSDTTTNPATSKSSSK---VTART 879
+F+K P +VKKQ EK ++ R+G + P ++ K
Sbjct: 454 TFIKLYPDIVKKQEEAWDNTEKRLSKVFD-RSGKASMKNAIPKPPMVHNTVKHLDSEKSM 512
Query: 878 PKVAN-----SRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGF 714
PK+A+ ++T ++ E REA+ KAL K+F+S K+CSFQ I Q LRD+AVS+S
Sbjct: 513 PKIASGMRRLTKTTITVETREALLKALPKVFQSHKVCSFQLICQGLRDLAVSQSTLPKAD 572
Query: 713 AREAVVAANSIDAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVP 534
R AV AA+ DA P+ELQ II+QVA NIHG V KSSP++PQYD RKV+IDL +A P
Sbjct: 573 PRIAVAAASGADAPPEELQEIISQVATNIHGFYVLKSSPEHPQYDELRKVIIDLLLARGP 632
Query: 533 NAKLKKATILEASKMELKREISQIEYQKV 447
NAKLKKA + EA+++ KR+++ IEY K+
Sbjct: 633 NAKLKKAEVFEAARLAFKRDVTNIEYNKL 661
>gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata]
Length = 666
Score = 513 bits (1321), Expect = e-142
Identities = 291/571 (50%), Positives = 374/571 (65%), Gaps = 15/571 (2%)
Frame = -1
Query: 2114 EDEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTV 1935
EDEVVREID+YF+P +DP T+LYVLQ P+R WRPYEL++RC+EVR++P + ++E+DL +
Sbjct: 93 EDEVVREIDMYFTPSLDPNTQLYVLQSPMRPVWRPYELEERCKEVRLRPTTAQMEVDLAI 152
Query: 1934 YVDSKNYDSGADPRVQMKKQILTTSW--EPSHVSGYAVGVLTGNKLYLNPIHTVVQLRPL 1761
DSKN+D + +M+KQ ++TSW P+ SGYAVGVL G+KL+LNPIHTVVQLRP
Sbjct: 153 DFDSKNFDRDSIYAEKMEKQTVSTSWIPVPTGTSGYAVGVLIGDKLHLNPIHTVVQLRPS 212
Query: 1760 MEHVDSKESKSKSVGPSNVNDTVKSEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYH 1581
+H+ E K K++ SN TV++EE +E KD EE WV LKYH
Sbjct: 213 KQHLKESELK-KNIATSNDEKTVENEEIKENKPVAPSKKQNKPPGNDKDIEEHWVHLKYH 271
Query: 1580 GASSDLTERYLQKMMAREVSQISFSMSSN----------DYLNSLCPGTSSDGFSSKGPS 1431
GA S+++ RYLQ+M E S I FSMS DYL +LCPG +D K
Sbjct: 272 GARSEISARYLQRMAMEEGSPIPFSMSLAFFSVNLIHRVDYLRTLCPGRPNDTDKYKDLR 331
Query: 1430 IRVLLTLPLKERFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKS 1251
IRV LPL ERFRTWL +GPP+HRF ALKHL D VEE+L VLQ +A+VVQGLWVPKS
Sbjct: 332 IRVS-QLPLDERFRTWLHEGPPIHRFGALKHLALDNPVEEILEVLQRYAQVVQGLWVPKS 390
Query: 1250 SLVYGTDQGIKVLARDYVLLLFSKNVIIKDSQLPNN-KLAPAMKDVLNVLAVKRDNFKDW 1074
SLVYG + G +VLARD+VL FSK+ IK S + A L +LAV+R + DW
Sbjct: 391 SLVYGRNDGHEVLARDFVLFEFSKSPFIKQSVFDRKPEFFKAATPALKLLAVERPDLNDW 450
Query: 1073 KLKELPDFSFVKSNPSVVKKQXXXXXXXEKIINDTI-GGRNGPGKKSDTTTNPATSKSSS 897
KLKE PD F +VK+Q K I + GGRN P K+ +NP+ +
Sbjct: 451 KLKEHPDKEFENLYGDLVKEQQVTWERLGKQIYGLLAGGRNRPTMKN--PSNPSAGIPAL 508
Query: 896 KVTARTPKVANSRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTG 717
+ + +RT+MSE REA+ KALQK+F++ K+CSFQQI LR+ AVSE+ R G
Sbjct: 509 PSGGKPTPRSVTRTSMSERTREALQKALQKVFRTHKVCSFQQIRLRLREAAVSENDRPKG 568
Query: 716 FAREAVVAANSI-DAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAE 540
A+ AV AA+ + DA P+ELQ +I+QVA NIHG V KSSPDNPQYD RKVV++L + E
Sbjct: 569 NAKGAVAAASFVDDAPPEELQAVIDQVAFNIHGDYVLKSSPDNPQYDALRKVVVELLIGE 628
Query: 539 VPNAKLKKATILEASKMELKREISQIEYQKV 447
P+AKLKKATI++A+K EL R+I E+QKV
Sbjct: 629 GPSAKLKKATIMKAAKSELNRDIPPAEFQKV 659
>ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Cucumis
sativus]
Length = 702
Score = 512 bits (1319), Expect = e-142
Identities = 286/589 (48%), Positives = 373/589 (63%), Gaps = 11/589 (1%)
Frame = -1
Query: 2114 EDEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTV 1935
ED VVREIDV F+P VD ++LYVLQYPLR +WRPYE + RC+EVRVKP++ EVE+DL V
Sbjct: 117 EDMVVREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNV 176
Query: 1934 YVDSKNYDSGADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLYLNPIHTVVQLRPLME 1755
++S NYD+ AD QMKKQ LT+SW+P + YAVG+L GNKL+LNP+H VVQLRP E
Sbjct: 177 DIESNNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFE 236
Query: 1754 HVDSKESKSKSVGPSNVNDTVKSEEPQE----GXXXXXXXXXXXXSEQTKDSEEDWVPLK 1587
H++S K K+ + VKSEE + G +E EE W+PLK
Sbjct: 237 HLNSGGPKRKN--NVRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTRDEECWIPLK 294
Query: 1586 YHGASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLP 1407
Y+G SDL+ R+LQ M+++ VS + FSMS +DY++SLCPGTS+ G KGPS + LL+L
Sbjct: 295 YYGLESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLS 354
Query: 1406 LKERFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQ 1227
L+ER + L +GPPV RF ALKH D EE + LQ +A++VQGLWVPKS + D
Sbjct: 355 LEERIKKLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQD- 413
Query: 1226 GIKVLARDYVLLLFSKNVIIKDSQLPNNK-LAPAMKDVLNVLAVKRDNFKDWKLKELPDF 1050
G ARD+VL LFSKN ++ SQ+ K L +K LN+ V+R FKDWK KE D
Sbjct: 414 GSGRCARDFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDR 473
Query: 1049 SFVKSNPSVVKKQXXXXXXXEKIIN-----DTIGGRNGPGKKSDTTTNPATSKSSSKVTA 885
F+ ++ + +KQ EK ++ N K SS + T
Sbjct: 474 LFLSNHVRIAEKQEELWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKLEKQVSSDQTTT 533
Query: 884 RTPKVA-NSRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAR 708
++ N + AMS+E REA+ KALQKLF++ K+CSFQ I Q LRD+AVS+S AR
Sbjct: 534 KSSNAPLNRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADAR 593
Query: 707 EAVVAANSIDAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNA 528
AV AA +DA PDEL+ II+QVA IHG+ V SSP++P+YDP RKVVI L P A
Sbjct: 594 MAVAAAYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKA 653
Query: 527 KLKKATILEASKMELKREISQIEYQKVLQELCLSQGSAWILRSAGGNTK 381
LKKA +LEASK EL R I+ EY KV+ E+C+S GS+W L+S GN++
Sbjct: 654 VLKKADVLEASKHELGRAINSNEYSKVMNEICISHGSSWTLKSGDGNSR 702
>ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
subunit RPC5-like [Cucumis sativus]
Length = 702
Score = 511 bits (1317), Expect = e-142
Identities = 286/589 (48%), Positives = 372/589 (63%), Gaps = 11/589 (1%)
Frame = -1
Query: 2114 EDEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTV 1935
ED VVREIDV F+P VD ++LYVLQYPLR +WRPYE + RC+EVRVKP++ EVE+DL V
Sbjct: 117 EDMVVREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNV 176
Query: 1934 YVDSKNYDSGADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLYLNPIHTVVQLRPLME 1755
++S NYD+ AD QMKKQ LT+SW+P + YAVG+L GNKL+LNP+H VVQLRP E
Sbjct: 177 DIESNNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFE 236
Query: 1754 HVDSKESKSKSVGPSNVNDTVKSEEPQE----GXXXXXXXXXXXXSEQTKDSEEDWVPLK 1587
H++S K K+ + VKSEE + G +E EE W+PLK
Sbjct: 237 HLNSGGPKRKN--NVRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTRDEECWIPLK 294
Query: 1586 YHGASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLP 1407
Y+G SDL+ R+LQ M+++ VS + FSMS +DY++SLCPGTS+ G KGPS + LL+L
Sbjct: 295 YYGLESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLS 354
Query: 1406 LKERFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQ 1227
L+ER + L +GPPV RF ALKH D EE + LQ +A++VQGLWVPKS + D
Sbjct: 355 LEERIKKLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQD- 413
Query: 1226 GIKVLARDYVLLLFSKNVIIKDSQLPNNK-LAPAMKDVLNVLAVKRDNFKDWKLKELPDF 1050
G ARD+VL LFSKN ++ SQ+ K L +K LN+ V+R FKDWK KE D
Sbjct: 414 GSGRCARDFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDR 473
Query: 1049 SFVKSNPSVVKKQXXXXXXXEKIIN-----DTIGGRNGPGKKSDTTTNPATSKSSSKVTA 885
F+ ++ + +KQ EK ++ N K SS + T
Sbjct: 474 LFLSNHVRIAEKQEELWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKLEKQVSSDQTTT 533
Query: 884 RTPKVA-NSRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAR 708
++ N + AMS+E REA+ KALQKLF++ K+CSFQ I Q LRD+AVS+S AR
Sbjct: 534 KSSNAPLNRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADAR 593
Query: 707 EAVVAANSIDAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNA 528
AV AA +DA PDEL II+QVA IHG+ V SSP++P+YDP RKVVI L P A
Sbjct: 594 MAVAAAYGVDAPPDELXKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKA 653
Query: 527 KLKKATILEASKMELKREISQIEYQKVLQELCLSQGSAWILRSAGGNTK 381
LKKA +LEASK EL R I+ EY KV+ E+C+S GS+W L+S GN++
Sbjct: 654 VLKKADVLEASKHELGRAINSNEYSKVMNEICISHGSSWTLKSGDGNSR 702
>gb|EOX91149.1| Transcription regulators,zinc ion binding, putative isoform 2
[Theobroma cacao]
Length = 588
Score = 504 bits (1299), Expect = e-140
Identities = 284/574 (49%), Positives = 375/574 (65%), Gaps = 12/574 (2%)
Frame = -1
Query: 2120 EPEDEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDL 1941
E ED VVREIDV+F+P +D T+LYVLQYPLR WRPYELD+RCEEVRVKPAS EVE+DL
Sbjct: 19 EEEDMVVREIDVFFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDL 78
Query: 1940 TVYVDSKNYDSGADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLYLNPIHTVVQLRPL 1761
V VDS NYDS R++M KQ L++SW P +GYAVGVL G+KL+LNPIH VVQLRP
Sbjct: 79 AVDVDSNNYDSERASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPS 138
Query: 1760 MEHVDSKESKSKSVGPSNVNDTVKSEEPQE----GXXXXXXXXXXXXSEQTKDSEEDWVP 1593
M H+ SK K+ ++ TVK EEP + G +EQ D +E WVP
Sbjct: 139 MCHLKPSVSKRKNAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVP 198
Query: 1592 LKYHGASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLT 1413
LKYH + +D + +YLQ+MMA E +I F+MS DY++SLCPG S++ ++GPS R+LL+
Sbjct: 199 LKYHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNN-KAQGPSRRLLLS 257
Query: 1412 LPLKERFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGT 1233
+PL+ER + L +GPP HRF ALKH D S+E++ VLQ HA +VQGLWVPKSSL++
Sbjct: 258 IPLEERLKKLLSEGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPE 317
Query: 1232 DQGIKVLARDYVLLLFSKNVIIKDSQLPNNKLAPAMKD----VLNVLAVKRDNFKDWKLK 1065
D K LARDYVLLLFSKN II +Q+ + L+P+ K+ L +LA++R +FKDWKLK
Sbjct: 318 DP-YKSLARDYVLLLFSKNPIISLAQV--HALSPSRKEEVKGFLKILAIERPSFKDWKLK 374
Query: 1064 ELPDFSFVKSNPSVVKKQXXXXXXXEKIINDTI--GGRNGPGK-KSDTTTNPATSKSSSK 894
E D F K P +VK Q E + + I G + GP + K T P + +S K
Sbjct: 375 ENADEGFKKLYPDIVKNQEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEKAMNSDK 434
Query: 893 VTARTPKVANSRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGF 714
R + MS+E REAI KAL+K+F++ K+CS Q I + LRD+A+S+S
Sbjct: 435 GVRRVAPAVQAGRTMSDETREAIPKALKKVFQTHKVCSLQLIRKGLRDLALSQSTLPKAD 494
Query: 713 AREAVVAANSIDAYPDELQTIINQVAVNIH-GICVPKSSPDNPQYDPFRKVVIDLFVAEV 537
AR V AA DA ELQ ++++VAV +H G+ V +SSP++P+YDP R+VVI+L +
Sbjct: 495 ARMVVKAAYGADAPEHELQEVVSEVAVELHGGLFVLRSSPEHPEYDPLREVVINLLRVK- 553
Query: 536 PNAKLKKATILEASKMELKREISQIEYQKVLQEL 435
KLKKA + A+ + LKREIS EY K L+ +
Sbjct: 554 --GKLKKADVSAAALLSLKREISNNEYNKALRNM 585
>gb|EOX91150.1| Transcription regulators,zinc ion binding, putative isoform 3
[Theobroma cacao]
Length = 736
Score = 502 bits (1293), Expect = e-139
Identities = 288/622 (46%), Positives = 384/622 (61%), Gaps = 45/622 (7%)
Frame = -1
Query: 2120 EPEDEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDL 1941
E ED VVREIDV+F+P +D T+LYVLQYPLR WRPYELD+RCEEVRVKPAS EVE+DL
Sbjct: 116 EEEDMVVREIDVFFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDL 175
Query: 1940 TVYVDSKNYDSGADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLYLNPIHTVVQLRPL 1761
V VDS NYDS R++M KQ L++SW P +GYAVGVL G+KL+LNPIH VVQLRP
Sbjct: 176 AVDVDSNNYDSERASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPS 235
Query: 1760 MEHVDSKESKSKSVGPSNVNDTVKSEEPQE----GXXXXXXXXXXXXSEQTKDSEEDWVP 1593
M H+ SK K+ ++ TVK EEP + G +EQ D +E WVP
Sbjct: 236 MCHLKPSVSKRKNAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVP 295
Query: 1592 LKYHGASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLT 1413
LKYH + +D + +YLQ+MMA E +I F+MS DY++SLCPG S++ ++GPS R+LL+
Sbjct: 296 LKYHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNN-KAQGPSRRLLLS 354
Query: 1412 LPLKERFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGT 1233
+PL+ER + L +GPP HRF ALKH D S+E++ VLQ HA +VQGLWVPKSSL++
Sbjct: 355 IPLEERLKKLLSEGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPE 414
Query: 1232 DQGIKVLARDYVLLLFSKNVIIKDSQLPNNKLAPAMKD----VLNVLAVKRDNFKDWKLK 1065
D K LARDYVLLLFSKN II +Q+ + L+P+ K+ L +LA++R +FKDWKLK
Sbjct: 415 DP-YKSLARDYVLLLFSKNPIISLAQV--HALSPSRKEEVKGFLKILAIERPSFKDWKLK 471
Query: 1064 ELPDFSFVKSNPSVVKKQXXXXXXXEKIINDTI--GGRNGPGK-KSDTTTNPATSKSSSK 894
E D F K P +VK Q E + + I G + GP + K T P + +S K
Sbjct: 472 ENADEGFKKLYPDIVKNQEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEKAMNSDK 531
Query: 893 VTARTPKVANSRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGF 714
R + MS+E REAI KAL+K+F++ K+CS Q I + LRD+A+S+S
Sbjct: 532 GVRRVAPAVQAGRTMSDETREAIPKALKKVFQTHKVCSLQLIRKGLRDLALSQSTLPKAD 591
Query: 713 AREAVVAANSIDAYPDELQTIINQVAVNIH-GICVPKSSPDNPQYDPFR----------- 570
AR V AA DA ELQ ++++VAV +H G+ V +SSP++P+YDP R
Sbjct: 592 ARMVVKAAYGADAPEHELQEVVSEVAVELHGGLFVLRSSPEHPEYDPLRLHKYVQLVFKW 651
Query: 569 --KVVIDLFVAEVPN--------------------AKLKKATILEASKMELKREISQIEY 456
++ +F + P+ KLKKA + A+ + LKREIS EY
Sbjct: 652 EEMFMVSMFFLQNPSFSSELFFPCREVVINLLRVKGKLKKADVSAAALLSLKREISNNEY 711
Query: 455 QKVLQELCLSQGSAWILRSAGG 390
KV+ + C + S W+L+S G
Sbjct: 712 NKVMSDFCEYKSSWWVLKSGDG 733
>ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
gi|568824759|ref|XP_006466762.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC5-like [Citrus sinensis]
gi|557527707|gb|ESR38957.1| hypothetical protein
CICLE_v10025048mg [Citrus clementina]
Length = 690
Score = 498 bits (1281), Expect = e-138
Identities = 275/582 (47%), Positives = 376/582 (64%), Gaps = 9/582 (1%)
Frame = -1
Query: 2120 EPEDEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDL 1941
+ ED +VREIDV+F+P +D ++LYV+QYPLR WRPYELD+RCEEVRVKP++ EVE+DL
Sbjct: 108 DDEDMIVREIDVFFTPSIDADSKLYVMQYPLRPLWRPYELDERCEEVRVKPSTSEVEMDL 167
Query: 1940 TVYVDSKNYDSGADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLYLNPIHTVVQLRPL 1761
++ VDS N+DS R+ M KQ L+T+W P +GYA+GVL GNKL+LNPIH VVQLR
Sbjct: 168 SIDVDSNNWDSEKASRLSMPKQTLSTTWMPPQATGYAIGVLIGNKLHLNPIHAVVQLRTS 227
Query: 1760 MEHVDSKESKSKSVGPSNVNDTVK-SEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKY 1584
M + S SK K+ S + ++ S + + EQ + EE WVPLKY
Sbjct: 228 MGFLKSGGSKRKNNVASEIPVKLEDSNQDKSVGSSKKQNKRMGSIEQRSNEEECWVPLKY 287
Query: 1583 HGASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPL 1404
HG+ SD + RYLQ+M+ E S I F+M+ DY++SLCPG S+ SKGPS R LL++PL
Sbjct: 288 HGSKSDFSARYLQRMLVEENSPIHFTMNPYDYVSSLCPGAGSNNTKSKGPSRRFLLSMPL 347
Query: 1403 KERFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQG 1224
+ERF+ L +G PV RF L H +++VE+V+ VL + +VQGLW P+S L++ D+
Sbjct: 348 EERFKKLLCEGEPVQRFSTLMHFAPNDTVEDVIGVLHKNGLLVQGLWAPRSPLLFNNDK- 406
Query: 1223 IKVLARDYVLLLFSKNVIIKDSQLP-NNKLAPAMKDVLNVLAVKRDNFKDWKLKELPDFS 1047
+K LARDYVLL FSKN ++K L + KL +K LN+ AV+R +FKDWK ++ D S
Sbjct: 407 MKCLARDYVLLSFSKNSVVKFQHLSVSPKLRDHIKCFLNIFAVERPDFKDWKFRQQTDLS 466
Query: 1046 FVKSNPSVVKKQXXXXXXXEKIINDTIG--GRNGPGKKSDTTTNPATSKSSSKV-TARTP 876
F+K +P++V KQ EK I D I G++G ++D + +K + ++ P
Sbjct: 467 FIKEHPNIVIKQEQVWAAAEKQITDVINKLGKSGSTLRNDAGKSAMVNKHLKAINSSNGP 526
Query: 875 KVA-NSRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAV 699
A +S E REA+ KALQKLF+ K+CS I Q LRD+A+S+S AR V
Sbjct: 527 SGALTGNKNLSNESREALPKALQKLFQIHKVCSLPLIKQGLRDLAISQSTLPKADARMTV 586
Query: 698 VAANSIDAY---PDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNA 528
+AA +D+ E +I+QVA NIHG V KSS D PQ+ P RKVV DL +A P+A
Sbjct: 587 LAAEIVDSSFVDTQEFAEVISQVATNIHGFYVSKSSED-PQHGPLRKVVTDLLLAGGPDA 645
Query: 527 KLKKATILEASKMELKREISQIEYQKVLQELCLSQGSAWILR 402
KLKKA ++EA++ LKREIS EY KV+ ++C S+GSAWIL+
Sbjct: 646 KLKKADVVEAARHVLKREISNAEYSKVMSDICESKGSAWILK 687
>ref|XP_004232385.1| PREDICTED: uncharacterized protein LOC101252245 [Solanum
lycopersicum]
Length = 659
Score = 474 bits (1221), Expect = e-131
Identities = 261/582 (44%), Positives = 368/582 (63%), Gaps = 6/582 (1%)
Frame = -1
Query: 2114 EDEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTV 1935
+DEVVRE+DV+ +P + YVLQYPLR +WRPY LD+RC++VR++P+S E+E+DL +
Sbjct: 95 QDEVVREVDVWLTPSAN---EFYVLQYPLRSEWRPYGLDERCQDVRLRPSSAEMEVDLAI 151
Query: 1934 YVDSKNYDSGADPRVQMKKQILTTSWEPSHV-SGYAVGVLTGNKLYLNPIHTVVQLRPLM 1758
DSKN+D + +KKQI++T W PS + +AVG+ G+K +LNP+H +VQLRP +
Sbjct: 152 DFDSKNFDRDSVHAATIKKQIVSTKWVPSSTCADFAVGIFIGDKFHLNPVHAIVQLRPSL 211
Query: 1757 EHVDSKESKSKSVGPSNVNDTVKSEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYHG 1578
+H KES+ K++ SN + ++E+ +E KD E W+ LKYHG
Sbjct: 212 QH--RKESELKNLTTSNDEKSCENEDVKEKKPVGLSKKQNKLPGNYKDIGEHWLHLKYHG 269
Query: 1577 ASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKE 1398
SD++ R+LQKM S + FSM +DYLN++CP +D + R L P +E
Sbjct: 270 TRSDISARHLQKMAMEGGSPVPFSMIPSDYLNAICPARPTDIDRLRNLRTR-LSQKPFEE 328
Query: 1397 RFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIK 1218
R RTWLL+GPP+HRFD LKHL D V+E+L VL+ A++VQGLWV KSSLVY T+ G++
Sbjct: 329 RVRTWLLEGPPIHRFDTLKHLAPDNPVDEILEVLKSCAQLVQGLWVAKSSLVYDTNNGVE 388
Query: 1217 VLARDYVLLLFSKNVIIKDSQLPNN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFV 1041
VLAR++VL F+K+ +IK S + A VL LAV+R + DWKLKELPD F
Sbjct: 389 VLARNFVLYEFTKSTLIKKSVFGRRPEFLKAATPVLKSLAVERPDLDDWKLKELPDKKFE 448
Query: 1040 KSNPSVVKKQXXXXXXXEKIINDTI-GGRNGPGKKSDTTTNPATSKSSSKVTARTPKVAN 864
VV++Q K IND + GGRN P T NP K++ + + K
Sbjct: 449 NLYGDVVREQEAIWESMGKQINDIMHGGRNRP-----TLKNPLNPKANIPALSSSDKPTP 503
Query: 863 S---RTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVA 693
+ RT++SEE+R A+ KALQ +F+ K+CS QI +L+ ++ S
Sbjct: 504 TTFLRTSLSEEIRGALPKALQNVFRIHKVCSLLQICELMEKEDPMKAIISP--------- 554
Query: 692 ANSIDAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKA 513
A DA E++ ++NQ+AVNIHG+ V KSSPDNPQYD RKVVIDLF+AE NAKLKKA
Sbjct: 555 AGISDALRKEIEAVVNQIAVNIHGVYVLKSSPDNPQYDALRKVVIDLFMAEGSNAKLKKA 614
Query: 512 TILEASKMELKREISQIEYQKVLQELCLSQGSAWILRSAGGN 387
+I+EA+K++L R+++ +E+QKV++ELC S+ SAW+L + N
Sbjct: 615 SIVEAAKLQLGRDVTTVEFQKVMKELCRSENSAWVLGISDSN 656
>ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5 [Medicago truncatula]
gi|358344405|ref|XP_003636280.1| DNA-directed RNA
polymerase III subunit RPC5 [Medicago truncatula]
gi|355502215|gb|AES83418.1| DNA-directed RNA polymerase
III subunit RPC5 [Medicago truncatula]
gi|355513299|gb|AES94922.1| DNA-directed RNA polymerase
III subunit RPC5 [Medicago truncatula]
Length = 683
Score = 470 bits (1210), Expect = e-130
Identities = 259/595 (43%), Positives = 376/595 (63%), Gaps = 16/595 (2%)
Frame = -1
Query: 2123 VEPEDEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEID 1944
++ ED VVREIDVYFSP +D T+LYV+QYPLR WRPY+LD++CEEVR+KP + EVE+D
Sbjct: 102 MDEEDTVVREIDVYFSPSIDNDTKLYVMQYPLRPSWRPYDLDEQCEEVRLKPGTSEVEVD 161
Query: 1943 LTVYVDSKNYDSGADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLYLNPIHTVVQLRP 1764
L++ ++S N + +++ KQ L+T+W+P +G AVG+L G+KL+L+PIH VVQLRP
Sbjct: 162 LSIDLESYNVEKATADKLKYTKQTLSTTWKPPPANGCAVGLLMGDKLHLHPIHAVVQLRP 221
Query: 1763 LMEHVDSKESKSKSVGPSNVND---TVKSEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVP 1593
++DS S+ K+V SN + T E+ +G EQ DS + WVP
Sbjct: 222 SRHYLDSGGSEKKNVATSNNQNKQTTPSMEQKSDG---------APSIEQKSDSNQCWVP 272
Query: 1592 LKYHGASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLT 1413
L+YHG SD++ RY Q+M+ E S I+F MS+ DY+ +LCPG SS+ +KGPS R LL+
Sbjct: 273 LEYHGCKSDISSRYFQQMVTHESSPINFEMSTYDYIATLCPGVSSNTL-AKGPSKRYLLS 331
Query: 1412 LPLKERFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGT 1233
LP+++R +T L++GPP+HRF A+KH + S +E+L VL+ A++++G WVP+SSL++ T
Sbjct: 332 LPVEKRLQTLLIEGPPLHRFSAIKHFAPECSDDELLSVLEKQAQLLRGYWVPRSSLLFPT 391
Query: 1232 DQGIKVLARDYVLLLFSKNVIIKDSQ---LPNNKLAPAMKDVLNVLAVKRDNFKD----W 1074
GI+ LAR+Y+L+ F K++ +K + L +L MK + A+++ + K W
Sbjct: 392 G-GIESLARNYILVRFHKSLTVKSDELRRLGGGELGNRMKHFVMQFALEKFDLKSKENYW 450
Query: 1073 KLKELPDFSFVKSNPSVVKKQXXXXXXXEKIINDTIGGRNGPGKKSDTTTNPATSKSSSK 894
K KELPD SF+K P VVKKQ E +N IG G K TN + +
Sbjct: 451 KFKELPDESFIKEFPIVVKKQEEIFKILENEVNSIIGTLGGKRKLKSAITNSGVNNALFT 510
Query: 893 VTARTPKVAN------SRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSES 732
T P+ + MS E R A+ AL+KLF++ K+CSFQ I Q LR +A++++
Sbjct: 511 STNSDPRATSLGEDPPRSMTMSSETRHALPIALKKLFQTHKVCSFQLICQELRGLALAQT 570
Query: 731 ARSTGFAREAVVAANSIDAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDL 552
G ++ +V AANS+D DEL+ I+ +VA +IHG V KS+ Q DPFR VVID+
Sbjct: 571 MLPKGGSKMSVDAANSLDVPQDELKAILGEVACDIHGCYVLKSA----QNDPFRDVVIDM 626
Query: 551 FVAEVPNAKLKKATILEASKMELKREISQIEYQKVLQELCLSQGSAWILRSAGGN 387
PN KLKKA ILEA++ +L R++ EY K + ELC+S+GS W+L+S G+
Sbjct: 627 LRGSGPNGKLKKAEILEAARRKLGRDVPNNEYIKAVSELCVSKGSFWVLKSGDGS 681
>ref|XP_006590438.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Glycine
max]
Length = 697
Score = 468 bits (1203), Expect = e-129
Identities = 265/602 (44%), Positives = 380/602 (63%), Gaps = 22/602 (3%)
Frame = -1
Query: 2126 EVEPEDEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEI 1947
++ ED VVREIDV+FSP VD +T+LYV QYPLR WRPY+LD++CEEVR+K + EVEI
Sbjct: 103 DIPEEDTVVREIDVFFSPSVDAQTQLYVFQYPLRPSWRPYDLDEQCEEVRLKTKTSEVEI 162
Query: 1946 DLTVYVDSKNYDSGADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLYLNPIHTVVQLR 1767
DL++ +DS + D + + KQ L+T+W+PSH +G AVG+L G+KL+L+P+H VVQLR
Sbjct: 163 DLSIDLDSDHIDKEFATKYNITKQTLSTTWKPSHANGCAVGLLMGDKLHLHPVHAVVQLR 222
Query: 1766 PLMEHVDSKESKSKSVGPSNVNDTVKSEEPQE-----GXXXXXXXXXXXXSEQTKDSEED 1602
P ++H++S SK K+ + N TVK E E EQ D +E
Sbjct: 223 PTLQHLNSGGSKRKNAASTGANATVKIEGSNEEKSVATSKKQNKQTGPSIIEQKSDGDEC 282
Query: 1601 WVPLKYHGASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRV 1422
WVPLKYH SD++ RYLQ+M+ +E S I+F+M + DY+ +LCPG SS+ KG S R
Sbjct: 283 WVPLKYHSCKSDISSRYLQQMVTQESSPINFTMRAYDYVTALCPGGSSNNL-PKGLSKRY 341
Query: 1421 LLTLPLKERFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLV 1242
LL+LP++ER + +L+ P+HRF A+KH + S E+L LQ HA +V GLW KSSL+
Sbjct: 342 LLSLPVEERLKK-MLEDRPLHRFSAIKHFAPEYSENELLGFLQQHAILVWGLWTAKSSLL 400
Query: 1241 YGTDQGIKVLARDYVLLLFSKNVIIK--DSQLPNNKLAPAMKDVLNVLAVKRDNFKD--- 1077
Y D G++ LARDY LLLFSK++ ++ D + +L +++ L + V+R++
Sbjct: 401 Y-PDGGVETLARDYSLLLFSKSLKVQFSDVSIRGGELVNRVRNCLKIFGVERNDLDKSTG 459
Query: 1076 -----WKLKELPDFSFVKSNPSVVKKQXXXXXXXEKII---NDTIG----GRNGPGKKSD 933
WK +ELPD SF K P +V+KQ EK + + +G G+N +
Sbjct: 460 KPNPYWKFRELPDESFKKLYPDIVEKQEELFKGLEKQLSGFSSNVGKRKIGKNAVANQGV 519
Query: 932 TTTNPATSKSSSKVTARTPKVANSRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLR 753
T + S +VT+ +V ++ MS E R A+ AL+KLF++ K+CSF+ I + LR
Sbjct: 520 NTEVHKSESSDQRVTS-LGRVPPAKMTMSNETRHALPIALKKLFQTHKVCSFKLICEGLR 578
Query: 752 DMAVSESARSTGFAREAVVAANSIDAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPF 573
+MAVS++ S G ++ AV AA+S+D +EL +I++VA I+G V KSSPD DPF
Sbjct: 579 EMAVSKAMLSKGDSKMAVDAAHSLDGPHNELMAVISEVACEINGSYVLKSSPD----DPF 634
Query: 572 RKVVIDLFVAEVPNAKLKKATILEASKMELKREISQIEYQKVLQELCLSQGSAWILRSAG 393
R VVID+ PNAKLKKA ILEA++ +L RE++ EY KV+ ELC+S+GS W+L+S
Sbjct: 635 RDVVIDMLCGSGPNAKLKKAEILEAARRKLGREVASNEYTKVMSELCVSKGSVWVLKSGD 694
Query: 392 GN 387
G+
Sbjct: 695 GS 696
>gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Morus notabilis]
Length = 732
Score = 460 bits (1183), Expect = e-126
Identities = 268/571 (46%), Positives = 357/571 (62%), Gaps = 12/571 (2%)
Frame = -1
Query: 2126 EVEPEDE-VVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVE 1950
EVE E++ VVREIDV+F+P +D T+LYVLQYPLR WRPYELD+RCEEVRVKPAS EVE
Sbjct: 102 EVEAEEDMVVREIDVFFNPKIDEGTQLYVLQYPLRPSWRPYELDERCEEVRVKPASSEVE 161
Query: 1949 IDLTVYVDSKNYDSGADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLYLNPIHTVVQL 1770
+DL++ VDSKNYD R+ M KQ L SW+ + YAVGVL GNKL+LN IH V+QL
Sbjct: 162 MDLSLDVDSKNYDPDCGDRLNMTKQTLCCSWDQPRATRYAVGVLMGNKLHLNRIHAVMQL 221
Query: 1769 RPLMEHVDSKESKSKSVGPSNVNDTVKSEEPQE----GXXXXXXXXXXXXSEQTKDSEED 1602
RP ++H+ S SK K+ + DTVK EE G +Q EE
Sbjct: 222 RPSLKHLISAGSKKKNNVKVDAEDTVKLEESSGKKAIGSSKKQIKQENSSVKQKIADEEG 281
Query: 1601 WVPLKYHGASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRV 1422
WVPLKYHG+ S+ + RYL+KM +E S + F+MS DYLNSLCPG+ +G KGPS R
Sbjct: 282 WVPLKYHGSESESSVRYLRKMAVQESSPLQFTMSPYDYLNSLCPGSCKNGNEPKGPSRRA 341
Query: 1421 LLTLPLKERFRTWLLQG-PPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSL 1245
LL+LPL+ER ++ L +G PVHRF LKH D + +E+L LQ+HA +VQGLW PKSSL
Sbjct: 342 LLSLPLEERIKSLLCEGLAPVHRFSVLKHFAPDCTTKEILDALQNHALLVQGLWAPKSSL 401
Query: 1244 VYGT--DQGIKVLARDYVLLLFSKNVIIKDSQLP-NNKLAPAMKDVLNVLAVKRDNFKDW 1074
+ GT + G + +ARDYVLLLF KN + S L + L A+ LN+L V+R + KDW
Sbjct: 402 LLGTSKETGAQRIARDYVLLLFWKNPVFSFSSLHFPSSLKTAVNKFLNILGVERPSVKDW 461
Query: 1073 KLKELPDFSFVKSNPSVVKKQXXXXXXXEKIINDTIG-GRNGPG-KKSDTTTNPATSKSS 900
K K D SF+K+ P VVKKQ E+ I + G G++G G K + + P +S
Sbjct: 462 KFKGQTDISFIKNYPDVVKKQEEVWGDLERDIMNMFGDGKSGRGPKNTSIPSRPVKPLNS 521
Query: 899 SKVTARTPKVANSRTAMSEEVREAI-TKALQKLFKSVKICSFQQISQLLRDMAVSESARS 723
+K + + +++RE + +K L K+ + K+CS Q + Q LR++A+++
Sbjct: 522 NKGVPKGTSEVVGGKKIPDDIREVLCSKILPKVIQEHKVCSLQLMCQGLRELALNKLNLP 581
Query: 722 TGFAREAVVAANSIDAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVA 543
R A AA A P EL ++++ A+NIHG+ V KSS ++PQYDPFR VVIDL
Sbjct: 582 KADDRFARAAACG-TASPGELVKLLDETAINIHGLYVLKSSAEHPQYDPFRNVVIDLLRQ 640
Query: 542 EVPNAKLKKATILEASKMELKREISQIEYQK 450
AKLKKA I +A+K LKR+++ EY K
Sbjct: 641 NGLAAKLKKAEIFDAAKNALKRDVTSNEYSK 671
>gb|ABU45208.1| unknown [Solanum bulbocastanum]
Length = 654
Score = 456 bits (1172), Expect = e-125
Identities = 258/570 (45%), Positives = 358/570 (62%), Gaps = 14/570 (2%)
Frame = -1
Query: 2114 EDEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTV 1935
+DEVVR++DV+ +P + YVLQYPLR +WRPY LD++C++VR++P++ E+E+DL +
Sbjct: 95 QDEVVRQVDVWLTPSFN---EFYVLQYPLRSEWRPYGLDEKCQDVRLRPSTAEMEVDLAI 151
Query: 1934 YVDSKNYDSGADPRVQMKKQILTTSWEP-SHVSGYAVGVLTGNKLYLNPIHTVVQLRPLM 1758
DSKN+D + +KKQI++T W P S + +AVG+L G+KL+LNP+H VVQLRP +
Sbjct: 152 DFDSKNFDRDSVHAATIKKQIVSTKWVPLSTCADFAVGILIGDKLHLNPVHAVVQLRPSL 211
Query: 1757 EHVDSKESKSKSVGPSNVNDTVKSEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYHG 1578
+H KES+ K++ SN T ++E+ +E KD E W+ LKYHG
Sbjct: 212 QH--RKESELKNLTTSNDEKTCENEDVKEKKPVGPSKKQNKPPGNYKDIGEHWLHLKYHG 269
Query: 1577 ASSDLTERYLQKMMAREVSQISFSM---------SSNDYLNSLCPGTSSDGFSSKGPSIR 1425
SD++ R+LQKM S + FSM DYLN++CP +D + R
Sbjct: 270 TRSDISARHLQKMAIEGGSPVPFSMIPFFRANLMHRGDYLNAICPARPTDIDRLRNLRTR 329
Query: 1424 VLLTLPLKERFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSL 1245
L P +ER RTWLLQGPP+HRFDALKHL D V+E+L VL+ A++VQGLWVPKSSL
Sbjct: 330 -LSQKPFEERVRTWLLQGPPIHRFDALKHLAPDNPVDEILEVLKSCAQLVQGLWVPKSSL 388
Query: 1244 VYGTDQGIKVLARDYVLLLFSKNVIIKDSQLPNN-KLAPAMKDVLNVLAVKRDNFKDWKL 1068
VY T+ G++VLAR++VL F+KN +IK S + A VL LAV+R + DWKL
Sbjct: 389 VYDTNNGVEVLARNFVLYEFTKNTLIKKSVFGRRPEFLKAATPVLKSLAVERPDLDDWKL 448
Query: 1067 KELPDFSFVKSNPSVVKKQXXXXXXXEKIINDTI-GGRNGPGKKSD-TTTNPATSKSSSK 894
KELPD F VV++Q K IND + GGRN P K+ N SS K
Sbjct: 449 KELPDKKFENLYGDVVREQQAIWDSMGKQINDILHGGRNRPTMKNPLPKANLPALSSSDK 508
Query: 893 VTARTPKVANSRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGF 714
T T RT+MSEE+R A+ KALQ +F+ K+CS QI +++
Sbjct: 509 PTPTT----FLRTSMSEEIRGALPKALQNIFRIHKVCSLLQICEMMEKED---------- 554
Query: 713 AREAVVAANSI-DAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEV 537
++A++A + DA E++ ++NQ+AVNIHG+ V KSSPDNPQYD RKVVIDLF+AE
Sbjct: 555 PKKAIIAPTGVSDALRKEIEAVVNQIAVNIHGVYVLKSSPDNPQYDALRKVVIDLFMAEG 614
Query: 536 PNAKLKKATILEASKMELKREISQIEYQKV 447
+AKLKKA+I+EA+K++L R+++ +E+QKV
Sbjct: 615 SSAKLKKASIVEAAKLQLGRDVTTVEFQKV 644