BLASTX nr result
ID: Rehmannia25_contig00009117
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00009117
(430 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002509528.1| structural constituent of ribosome, putative... 73 3e-11
gb|EXC31328.1| 30S ribosomal protein S21 [Morus notabilis] 69 9e-10
emb|CBI21360.3| unnamed protein product [Vitis vinifera] 68 1e-09
ref|XP_002268728.1| PREDICTED: uncharacterized protein LOC100241... 68 1e-09
emb|CAN82190.1| hypothetical protein VITISV_031115 [Vitis vinifera] 68 1e-09
gb|EOY02778.1| Ribosomal protein S21 family protein isoform 1 [T... 63 4e-08
ref|XP_006447081.1| hypothetical protein CICLE_v10016867mg [Citr... 62 1e-07
ref|XP_006395478.1| hypothetical protein EUTSA_v10004988mg [Eutr... 60 4e-07
ref|XP_006290382.1| hypothetical protein CARUB_v10018089mg [Caps... 60 4e-07
ref|NP_566809.1| plastid ribosomal protein S21 [Arabidopsis thal... 58 1e-06
ref|XP_002875359.1| hypothetical protein ARALYDRAFT_484499 [Arab... 58 2e-06
gb|EOY22382.1| Ribosomal protein S21 family protein, putative [T... 57 2e-06
ref|XP_004145671.1| PREDICTED: uncharacterized protein LOC101216... 57 2e-06
pdb|3BBN|U Chain U, Homology Model For The Spinach Chloroplast 3... 57 2e-06
gb|EMJ16261.1| hypothetical protein PRUPE_ppa012283mg [Prunus pe... 57 3e-06
gb|AAK64005.1| AT3g27160/MYF5_3 [Arabidopsis thaliana] gi|186553... 57 3e-06
ref|XP_004303982.1| PREDICTED: uncharacterized protein LOC101292... 55 7e-06
gb|AFK33554.1| unknown [Lotus japonicus] 55 1e-05
>ref|XP_002509528.1| structural constituent of ribosome, putative [Ricinus communis]
gi|223549427|gb|EEF50915.1| structural constituent of
ribosome, putative [Ricinus communis]
Length = 175
Score = 73.2 bits (178), Expect = 3e-11
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = +1
Query: 1 KRRRFFENKQDXXXXXXXXXXXXXXXXXPQSRFGPQDRQETPNNKKGDEDEDNWDLPEGD 180
KRRRFFENKQD PQSRF Q++QET KK D+D DNW+LPEGD
Sbjct: 113 KRRRFFENKQDEKKRKTREAAKRNKKRRPQSRFTTQNKQETSTTKKDDDDGDNWELPEGD 172
Query: 181 IPY 189
+PY
Sbjct: 173 LPY 175
>gb|EXC31328.1| 30S ribosomal protein S21 [Morus notabilis]
Length = 182
Score = 68.6 bits (166), Expect = 9e-10
Identities = 37/65 (56%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Frame = +1
Query: 1 KRRRFFENKQDXXXXXXXXXXXXXXXXXPQS-RFGPQDRQETP-NNKKGDEDEDNWDLPE 174
KRRRF ENKQD P RF Q+RQETP ++KK DEDEDNWDLPE
Sbjct: 118 KRRRFHENKQDEKKRKTREAAKRNRRRRPPPPRFSAQNRQETPPSSKKQDEDEDNWDLPE 177
Query: 175 GDIPY 189
GDIPY
Sbjct: 178 GDIPY 182
>emb|CBI21360.3| unnamed protein product [Vitis vinifera]
Length = 73
Score = 67.8 bits (164), Expect = 1e-09
Identities = 32/64 (50%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +1
Query: 1 KRRRFFENKQDXXXXXXXXXXXXXXXXXPQSRFGPQD-RQETPNNKKGDEDEDNWDLPEG 177
KRRRFFENKQD PQSRF QD +QE NKK D++EDNW++PEG
Sbjct: 10 KRRRFFENKQDEKKRKTREAAKRNRRRRPQSRFSTQDSKQEGSKNKKDDDEEDNWEVPEG 69
Query: 178 DIPY 189
++P+
Sbjct: 70 ELPF 73
>ref|XP_002268728.1| PREDICTED: uncharacterized protein LOC100241260 [Vitis vinifera]
Length = 188
Score = 67.8 bits (164), Expect = 1e-09
Identities = 32/64 (50%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +1
Query: 1 KRRRFFENKQDXXXXXXXXXXXXXXXXXPQSRFGPQD-RQETPNNKKGDEDEDNWDLPEG 177
KRRRFFENKQD PQSRF QD +QE NKK D++EDNW++PEG
Sbjct: 125 KRRRFFENKQDEKKRKTREAAKRNRRRRPQSRFSTQDSKQEGSKNKKDDDEEDNWEVPEG 184
Query: 178 DIPY 189
++P+
Sbjct: 185 ELPF 188
>emb|CAN82190.1| hypothetical protein VITISV_031115 [Vitis vinifera]
Length = 188
Score = 67.8 bits (164), Expect = 1e-09
Identities = 32/64 (50%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +1
Query: 1 KRRRFFENKQDXXXXXXXXXXXXXXXXXPQSRFGPQD-RQETPNNKKGDEDEDNWDLPEG 177
KRRRFFENKQD PQSRF QD +QE NKK D++EDNW++PEG
Sbjct: 125 KRRRFFENKQDEKKRKTREAAKRNRRRRPQSRFSTQDSKQEGSKNKKDDDEEDNWEVPEG 184
Query: 178 DIPY 189
++P+
Sbjct: 185 ELPF 188
>gb|EOY02778.1| Ribosomal protein S21 family protein isoform 1 [Theobroma cacao]
gi|508710882|gb|EOY02779.1| Ribosomal protein S21 family
protein isoform 1 [Theobroma cacao]
Length = 175
Score = 63.2 bits (152), Expect = 4e-08
Identities = 27/63 (42%), Positives = 38/63 (60%)
Frame = +1
Query: 1 KRRRFFENKQDXXXXXXXXXXXXXXXXXPQSRFGPQDRQETPNNKKGDEDEDNWDLPEGD 180
KRRRFFENKQD PQ+R ++QE + K+ D++EDNW++P+GD
Sbjct: 113 KRRRFFENKQDEKKRKSREAAKRNRRRRPQARSSLPNKQEVSSKKRDDDEEDNWEMPDGD 172
Query: 181 IPY 189
+PY
Sbjct: 173 LPY 175
>ref|XP_006447081.1| hypothetical protein CICLE_v10016867mg [Citrus clementina]
gi|568831593|ref|XP_006470046.1| PREDICTED:
uncharacterized protein LOC102628693 [Citrus sinensis]
gi|557549692|gb|ESR60321.1| hypothetical protein
CICLE_v10016867mg [Citrus clementina]
Length = 183
Score = 61.6 bits (148), Expect = 1e-07
Identities = 31/63 (49%), Positives = 34/63 (53%)
Frame = +1
Query: 1 KRRRFFENKQDXXXXXXXXXXXXXXXXXPQSRFGPQDRQETPNNKKGDEDEDNWDLPEGD 180
KRRRFFE KQD Q R Q+RQE KK D+DEDNW+LPEG
Sbjct: 121 KRRRFFETKQDEKKRKTREAAKRNRRRRSQFRVPVQNRQEATPTKKDDDDEDNWELPEGG 180
Query: 181 IPY 189
IPY
Sbjct: 181 IPY 183
>ref|XP_006395478.1| hypothetical protein EUTSA_v10004988mg [Eutrema salsugineum]
gi|557092117|gb|ESQ32764.1| hypothetical protein
EUTSA_v10004988mg [Eutrema salsugineum]
Length = 182
Score = 59.7 bits (143), Expect = 4e-07
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Frame = +1
Query: 1 KRRRFFENKQDXXXXXXXXXXXXXXXXXPQSRFGPQDRQETP---NNKKGDEDEDNWDLP 171
KRRR+FENKQD PQ+RF + R+E +KK DE+EDNW++P
Sbjct: 117 KRRRYFENKQDEKKRRTRDAAKRNKKRRPQARFTQETREEAAAATKSKKKDEEEDNWEMP 176
Query: 172 EGDIP 186
+GD+P
Sbjct: 177 DGDVP 181
>ref|XP_006290382.1| hypothetical protein CARUB_v10018089mg [Capsella rubella]
gi|482559089|gb|EOA23280.1| hypothetical protein
CARUB_v10018089mg [Capsella rubella]
Length = 183
Score = 59.7 bits (143), Expect = 4e-07
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Frame = +1
Query: 1 KRRRFFENKQDXXXXXXXXXXXXXXXXXPQSRFGPQDRQETP---NNKKGDEDEDNWDLP 171
KRRR+FENKQD PQ+RF + R+E +KK DE+EDNW++P
Sbjct: 118 KRRRYFENKQDEKKRRTRDAAKRNKKRRPQARFTQETREEAAAATKSKKKDEEEDNWEMP 177
Query: 172 EGDIP 186
+GD+P
Sbjct: 178 DGDVP 182
>ref|NP_566809.1| plastid ribosomal protein S21 [Arabidopsis thaliana]
gi|9294081|dbj|BAB01933.1| unnamed protein product
[Arabidopsis thaliana] gi|332643753|gb|AEE77274.1|
plastid ribosomal protein S21 [Arabidopsis thaliana]
Length = 183
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +1
Query: 1 KRRRFFENKQDXXXXXXXXXXXXXXXXXPQSRFGPQDRQETP---NNKKGDEDEDNWDLP 171
KRRR+FENKQD PQ+RF + R+E +KK DE+EDNW++P
Sbjct: 118 KRRRYFENKQDEKKRRTRDAAKRNKKRRPQARFTQETREEAAAATKSKKKDEEEDNWEMP 177
Query: 172 EGDIP 186
GD+P
Sbjct: 178 GGDVP 182
>ref|XP_002875359.1| hypothetical protein ARALYDRAFT_484499 [Arabidopsis lyrata subsp.
lyrata] gi|297321197|gb|EFH51618.1| hypothetical protein
ARALYDRAFT_484499 [Arabidopsis lyrata subsp. lyrata]
Length = 184
Score = 57.8 bits (138), Expect = 2e-06
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Frame = +1
Query: 1 KRRRFFENKQDXXXXXXXXXXXXXXXXXPQSRFGPQDRQETP----NNKKGDEDEDNWDL 168
KRRR+FENKQD PQ+RF + R+E +KK DE+EDNW++
Sbjct: 118 KRRRYFENKQDEKKRRTRDAAKRNKKRRPQARFTQETREEAAAAATKSKKKDEEEDNWEM 177
Query: 169 PEGDIP 186
P GD+P
Sbjct: 178 PGGDVP 183
>gb|EOY22382.1| Ribosomal protein S21 family protein, putative [Theobroma cacao]
Length = 210
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/63 (42%), Positives = 36/63 (57%)
Frame = +1
Query: 1 KRRRFFENKQDXXXXXXXXXXXXXXXXXPQSRFGPQDRQETPNNKKGDEDEDNWDLPEGD 180
KRRRFFE+ QD PQ + Q ++ETP KK D+++DNW+LP GD
Sbjct: 149 KRRRFFESSQDKKKRKAREASKRNRKRRPQRKASAQAKEETPK-KKDDDEDDNWELPGGD 207
Query: 181 IPY 189
+PY
Sbjct: 208 LPY 210
>ref|XP_004145671.1| PREDICTED: uncharacterized protein LOC101216973 [Cucumis sativus]
gi|449523367|ref|XP_004168695.1| PREDICTED:
uncharacterized protein LOC101228071 [Cucumis sativus]
Length = 183
Score = 57.4 bits (137), Expect = 2e-06
Identities = 30/63 (47%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 1 KRRRFFENKQDXXXXXXXXXXXXXXXXXPQSRFGPQDRQETPNNKKGDEDEDNWDLPEG- 177
KRRRFFEN QD PQ+RF PQ++Q+ P K+ + D+DNWDLPE
Sbjct: 121 KRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQ-EADDDNWDLPEDE 179
Query: 178 DIP 186
DIP
Sbjct: 180 DIP 182
>pdb|3BBN|U Chain U, Homology Model For The Spinach Chloroplast 30s Subunit
Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome.
gi|17154781|gb|AAL35983.1|AF104396_1 ribosome-like
protein [Cucumis sativus]
Length = 190
Score = 57.4 bits (137), Expect = 2e-06
Identities = 30/63 (47%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 1 KRRRFFENKQDXXXXXXXXXXXXXXXXXPQSRFGPQDRQETPNNKKGDEDEDNWDLPEG- 177
KRRRFFEN QD PQ+RF PQ++Q+ P K+ + D+DNWDLPE
Sbjct: 128 KRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQ-EADDDNWDLPEDE 186
Query: 178 DIP 186
DIP
Sbjct: 187 DIP 189
>gb|EMJ16261.1| hypothetical protein PRUPE_ppa012283mg [Prunus persica]
Length = 176
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/63 (44%), Positives = 32/63 (50%)
Frame = +1
Query: 1 KRRRFFENKQDXXXXXXXXXXXXXXXXXPQSRFGPQDRQETPNNKKGDEDEDNWDLPEGD 180
KRRR+FENKQD Q + E P KK D+D DNWDLP+GD
Sbjct: 114 KRRRYFENKQDEKKRRTRDAAKRNKRSRRPFSRPFQQKPEVPETKKSDDDGDNWDLPQGD 173
Query: 181 IPY 189
IPY
Sbjct: 174 IPY 176
>gb|AAK64005.1| AT3g27160/MYF5_3 [Arabidopsis thaliana] gi|18655399|gb|AAL76155.1|
AT3g27160/MYF5_3 [Arabidopsis thaliana]
Length = 183
Score = 56.6 bits (135), Expect = 3e-06
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +1
Query: 1 KRRRFFENKQDXXXXXXXXXXXXXXXXXPQSRFGPQDRQETP---NNKKGDEDEDNWDLP 171
KRRR+FENKQD PQ+RF + R+E +KK DE++DNW++P
Sbjct: 118 KRRRYFENKQDEKKRRTRDAAKRNKKRRPQARFTQETREEAAAATKSKKKDEEKDNWEMP 177
Query: 172 EGDIP 186
GD+P
Sbjct: 178 GGDVP 182
>ref|XP_004303982.1| PREDICTED: uncharacterized protein LOC101292725 [Fragaria vesca
subsp. vesca]
Length = 179
Score = 55.5 bits (132), Expect = 7e-06
Identities = 30/66 (45%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +1
Query: 1 KRRRFFENKQDXXXXXXXXXXXXXXXXXPQSR---FGPQDRQETPNNKKGDEDEDNWDLP 171
KRRR+FEN QD SR + Q+ P KK D+DEDNWDLP
Sbjct: 114 KRRRYFENTQDEKKRRTRDAAKRNKRRRTFSRPPLMQNRQGQDVPVPKKSDDDEDNWDLP 173
Query: 172 EGDIPY 189
EGDIPY
Sbjct: 174 EGDIPY 179
>gb|AFK33554.1| unknown [Lotus japonicus]
Length = 182
Score = 55.1 bits (131), Expect = 1e-05
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +1
Query: 1 KRRRFFENKQDXXXXXXXXXXXXXXXXX-PQSRFGPQDRQETPNNKKGDEDEDNWDLPEG 177
KRRRFFENKQD P ++F Q++Q+ P K +D+DNWDLPEG
Sbjct: 118 KRRRFFENKQDEKKRKHRDAAKRASRARRPFTKFSAQNKQDVPTTTKKVKDDDNWDLPEG 177
Query: 178 DI 183
D+
Sbjct: 178 DL 179