BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00008952
         (1952 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66959.1| hypothetical protein VITISV_013138 [Vitis vinifera]   377   e-101
emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]   375   e-101
emb|CAN78666.1| hypothetical protein VITISV_032507 [Vitis vinifera]   373   e-100
emb|CAN68340.1| hypothetical protein VITISV_025981 [Vitis vinifera]   336   2e-89
ref|XP_002263348.2| PREDICTED: wall-associated receptor kinase 2...   332   4e-88
emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]        304   8e-80
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]          280   2e-72
ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854...   278   6e-72
emb|CAN69855.1| hypothetical protein VITISV_041230 [Vitis vinifera]   277   1e-71
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]   276   2e-71
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   276   2e-71
ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252...   275   5e-71
gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo s...   273   2e-70
gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea ...   259   4e-66
gb|AAP54028.1| retrotransposon protein, putative, Ty1-copia subc...   234   1e-58
gb|ABA97124.1| retrotransposon protein, putative, Ty1-copia subc...   233   2e-58
gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subc...   233   3e-58
gb|ABA96250.1| retrotransposon protein, putative, Ty1-copia subc...   233   3e-58
gb|AAS07202.1| putative integrase [Oryza sativa Japonica Group] ...   233   3e-58
emb|CAH66912.1| OSIGBa0126B18.5 [Oryza sativa Indica Group]           231   7e-58

>emb|CAN66959.1| hypothetical protein VITISV_013138 [Vitis vinifera]
          Length = 1234

 Score =  377 bits (968), Expect = e-101
 Identities = 205/431 (47%), Positives = 269/431 (62%), Gaps = 14/431 (3%)
 Frame = -2

Query: 1282 IKVMNQDFVKLDRLDGTGTNFNRWKDKLMFFLTALKVAYVLNPDLPEIPPPKDGESDEVK 1103
            IK+MNQD V+LDR DG+  NF RW+DK+ F LTALK+ Y+L+P L  +P PK+ ++ +V 
Sbjct: 6    IKIMNQDLVRLDRFDGS--NFTRWQDKVRFLLTALKIFYILDPTLAPLPEPKENDTPQVV 63

Query: 1102 KQREKRQEDEVMCRGHILNTLSDTLYDLFTAVKSPREIWATLEREYASQKQGADKFLIKK 923
              R+KR+EDE++CRGHILN LSD LYDL+T   S REIW  LE +Y ++++G  KFLI +
Sbjct: 64   AARKKREEDELICRGHILNALSDRLYDLYTNTNSAREIWEALENKYKAEEEGTKKFLISQ 123

Query: 922  YFEFKLDDSSSLMDQIHNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLLHT 743
            Y +FK  D   L+ QIH LQVIV+KLK   +E+ E+ QVGAI+AKLPSSW  Y+K++LH 
Sbjct: 124  YIDFKFFDEKPLLPQIHELQVIVNKLKVLKIELPEAFQVGAIVAKLPSSWKGYRKRILHK 183

Query: 742  SEILTISSVLKHLRIEEGARILHKKEFDSDPRVNMVH--------EKKFKNKRKNSEN-- 593
            SE  ++  + KHLRIEE +R   K   +S+   N  +          K  N +KNS N  
Sbjct: 184  SEDYSLEEIQKHLRIEEESRSRDKMVEESNGGTNKANAISKANHPRGKNNNNKKNSGNYM 243

Query: 592  ---ADSEDKKKKNRVCYNCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSL 422
                + E  K K   C+ CGK GHY  EC                       EIIA LS 
Sbjct: 244  SPKKNQEQFKGKKGXCFVCGKPGHYARECRFRKDQKGAVVNAID-------EEIIATLSD 296

Query: 421  GTVTELHLATPTSSKDWWYDSGAAIHVCNDKEQFKNYEILDG-QQVVMANGVRAKVLGRG 245
              V +         + WWYD+ A +HV  DK  FK +E   G Q+V M N  ++KVLG+G
Sbjct: 297  VCVVQ------GKVQGWWYDTCATVHVTYDKSLFKTFEDAKGBQEVQMGNEGKSKVLGKG 350

Query: 244  DVHLDFTSGKKMVLTNVLHVPDVVKNLVSADILNKKGLKAVLESNNVILSKNGVFVGKGY 65
             + + FTSGKK+ LTNVL+VPD+ KNLVS D+L K G+KAV ES  +ILSK+G FVGKGY
Sbjct: 351  TIEVVFTSGKKVTLTNVLYVPDMNKNLVSGDLLGKPGIKAVFESGKLILSKSGNFVGKGY 410

Query: 64   SCNGLFKLSIN 32
            SC+G+ KL  N
Sbjct: 411  SCDGMIKLCTN 421


>emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]
          Length = 1473

 Score =  375 bits (962), Expect = e-101
 Identities = 207/441 (46%), Positives = 274/441 (62%), Gaps = 18/441 (4%)
 Frame = -2

Query: 1282 IKVMNQDFVKLDRLDGTGTNFNRWKDKLMFFLTALKVAYVLNPDLPEIPPPKDGESDEVK 1103
            IK+MNQD V+LDR DG+  NF RW+DK+ F LTALK+ Y+L+P L  +P PK+ ++ +V 
Sbjct: 6    IKIMNQDLVRLDRFDGS--NFXRWQDKVRFLLTALKIFYILDPTLXPLPEPKENDTPQVV 63

Query: 1102 KQREKRQEDEVMCRGHILNTLSDTLYDLFTAVKSPREIWATLEREYASQKQGADKFLIKK 923
              R+KR+EDE++CRGHILN LSD LYDL+T   S REIW  LE +Y ++++G  KFLI +
Sbjct: 64   AARKKREEDELICRGHILNALSDRLYDLYTNTXSAREIWEALENKYKAEEEGTKKFLISQ 123

Query: 922  YFEFKLDDSSSLMDQIHNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLLHT 743
            Y +FK  D   L+ QIH LQVIV+KLK   +E+ E+ QVGAI+AKLPSSW  Y+K++LH 
Sbjct: 124  YIDFKFFDEKPLLPQIHELQVIVNKLKVLKIELPEAFQVGAIVAKLPSSWKGYRKRILHK 183

Query: 742  SEILTISSVLKHLRIEEGARILHKKEFDSDPRVNMVH--------EKKFKNKRKNSEN-- 593
            SE  ++  + KHLRIEE +R   K   +S+   N  +          K  N +KNS N  
Sbjct: 184  SEDYSLEEIQKHLRIEEESRSRDKMVEESNGGTNKANAISKANHPRGKNNNNKKNSGNYM 243

Query: 592  ---ADSEDKKKKNRVCYNCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSL 422
                + E  K K   C+ CGK GHY  EC                       EIIA LS 
Sbjct: 244  SPKKNQEQFKGKKGPCFVCGKPGHYARECRFRKDQKGAVVNAID-------EEIIATLSD 296

Query: 421  GTVTELHLATPTSSKDWWYDSGAAIHVCNDKEQFKNYEILDG-QQVVMANGVRAKVLGRG 245
              V +         + WWYD+ A +HV  DK  FK +E   G Q+V M N  ++KVLG+G
Sbjct: 297  VCVVQ------GKVQGWWYDTCATVHVTYDKSLFKTFEDAKGDQEVQMGNEGKSKVLGKG 350

Query: 244  DVHLDFTSGKKMVLTNVLHVPDVVKNLVSADILNKKGLKAVLESNNVILSKNGVFVGKGY 65
             + + FTSGKK+ L NVL+VPD+ KNLVS D+L K G+KAV ES  +IL+K+G FVGKGY
Sbjct: 351  TIEVVFTSGKKVTLKNVLYVPDMNKNLVSGDLLGKPGIKAVFESGKLILTKSGNFVGKGY 410

Query: 64   SCNGLFKLS----INKVNNVS 14
            SC+G+ KLS    INK+ + S
Sbjct: 411  SCDGMIKLSTNDNINKMTSTS 431


>emb|CAN78666.1| hypothetical protein VITISV_032507 [Vitis vinifera]
          Length = 804

 Score =  373 bits (957), Expect = e-100
 Identities = 203/431 (47%), Positives = 268/431 (62%), Gaps = 14/431 (3%)
 Frame = -2

Query: 1282 IKVMNQDFVKLDRLDGTGTNFNRWKDKLMFFLTALKVAYVLNPDLPEIPPPKDGESDEVK 1103
            IK+MNQD V+LDR DG+  NF RW+DK+ F LTALK+ Y+L+P L  +P PK+ ++ +V 
Sbjct: 6    IKIMNQDLVRLDRFDGS--NFTRWQDKVRFLLTALKIFYILDPTLAPLPEPKENDTPQVV 63

Query: 1102 KQREKRQEDEVMCRGHILNTLSDTLYDLFTAVKSPREIWATLEREYASQKQGADKFLIKK 923
              R+KR+EDE++CRGHILN LSD LYDL+T   S REIW  LE +Y ++++G  KFLI +
Sbjct: 64   AARKKREEDELICRGHILNALSDRLYDLYTNTNSAREIWEALENKYKAEEEGTKKFLISQ 123

Query: 922  YFEFKLDDSSSLMDQIHNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLLHT 743
            Y +FK  D   L+ QIH LQVIV+KLK   +E+ E+ QVGAI+AKLPSSW  Y+K++LH 
Sbjct: 124  YIDFKFFDEKPLLPQIHELQVIVNKLKVLKIELPEAFQVGAIVAKLPSSWKGYRKRILHK 183

Query: 742  SEILTISSVLKHLRIEEGARILHKKEFDSDPRVNMVH--------EKKFKNKRKNSEN-- 593
            SE  ++  + KHLRI+E +R   K   +S+   N  +          K  N +KNS N  
Sbjct: 184  SEDYSLEEIQKHLRIKEESRSRDKMVEESNGGTNKANAISKANHPRGKNNNNKKNSGNYM 243

Query: 592  ---ADSEDKKKKNRVCYNCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSL 422
                + E  K K   C+ CGK GHY  EC                       EIIA LS 
Sbjct: 244  SPKKNQEQFKGKKGPCFVCGKPGHYARECRFRKDQKGVVVNAID-------EEIIATLSD 296

Query: 421  GTVTELHLATPTSSKDWWYDSGAAIHVCNDKEQFKNYEILDG-QQVVMANGVRAKVLGRG 245
              V +         + WWYD+ A +HV  DK  FK +E   G Q+V M N  ++KVLG+G
Sbjct: 297  VCVVQ------GKVQGWWYDTCATVHVTYDKSLFKTFEDAKGDQEVQMGNEGKSKVLGKG 350

Query: 244  DVHLDFTSGKKMVLTNVLHVPDVVKNLVSADILNKKGLKAVLESNNVILSKNGVFVGKGY 65
             + + FTSGKK+ L NVL+VPD+ KNLVS D+L K G+KAV ES  +IL K+G FVGKGY
Sbjct: 351  TIEVVFTSGKKVTLKNVLYVPDMNKNLVSGDLLGKPGIKAVFESGKLILXKSGNFVGKGY 410

Query: 64   SCNGLFKLSIN 32
            SC+G+ KLS N
Sbjct: 411  SCDGMIKLSTN 421


>emb|CAN68340.1| hypothetical protein VITISV_025981 [Vitis vinifera]
          Length = 791

 Score =  336 bits (862), Expect = 2e-89
 Identities = 193/431 (44%), Positives = 254/431 (58%), Gaps = 14/431 (3%)
 Frame = -2

Query: 1282 IKVMNQDFVKLDRLDGTGTNFNRWKDKLMFFLTALKVAYVLNPDLPEIPPPKDGESDEVK 1103
            IK+MNQD V+LDR DG+  NF RW+DK+ F LTALK+ Y+L+P L  +P PK+ ++ +V 
Sbjct: 6    IKIMNQDLVRLDRFDGS--NFTRWQDKVRFLLTALKIFYILDPTLAPLPEPKENDTPQVV 63

Query: 1102 KQREKRQEDEVMCRGHILNTLSDTLYDLFTAVKSPREIWATLEREYASQKQGADKFLIKK 923
              R+KR++DE++CRGHILN LSD LYDL+T   S REIW  LE +Y ++++G  +FLI +
Sbjct: 64   AARKKREKDELICRGHILNALSDRLYDLYTNTNSAREIWEALENKYKAEEEGTKRFLISQ 123

Query: 922  YFEFKLDDSSSLMDQIHNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLLHT 743
            Y +FK  D   L+ QIH LQVIV+KLK   +E+ E+ QVGAI+ KLPSSW  Y+K++LH 
Sbjct: 124  YIDFKFVDEKPLLPQIHKLQVIVNKLKVLKIELPEAFQVGAIVVKLPSSWKGYRKRILHK 183

Query: 742  SEILTISSVLKHLRIEEGARILHKKEFDSDPRVNMV-------HEK-KFKNKRKNSEN-- 593
            SE  ++  + KHLRIEE +R   K   +S+   N         H K K  N +KNS N  
Sbjct: 184  SEDYSLEEIQKHLRIEEESRSRDKMVEESNGGTNKANAVSKANHPKGKNNNNKKNSGNYM 243

Query: 592  ---ADSEDKKKKNRVCYNCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSL 422
                + E  K K  +C+ CGK GHY  EC                       EIIA LS 
Sbjct: 244  SPKKNQEQFKGKKGLCFVCGKPGHYARECRYRKNQKGAVVNAID-------EEIIATLS- 295

Query: 421  GTVTELHLATPTSSKDWWYDSGAAIHVCNDKEQFKNYEILDG-QQVVMANGVRAKVLGRG 245
                                      VC    Q K +E   G Q+V M N  R+KVLG+G
Sbjct: 296  -------------------------DVC--VVQGKTFEDAKGDQEVQMGNEGRSKVLGKG 328

Query: 244  DVHLDFTSGKKMVLTNVLHVPDVVKNLVSADILNKKGLKAVLESNNVILSKNGVFVGKGY 65
             + + FTSGK++ L NVL+VPD+ KNLVS D+L K   KAV ES  +ILSK+G FVG GY
Sbjct: 329  TIEVAFTSGKRVTLINVLYVPDMNKNLVSGDLLGKPSFKAVFESGKLILSKSGNFVGNGY 388

Query: 64   SCNGLFKLSIN 32
            SC+G+ KL  N
Sbjct: 389  SCDGMIKLCTN 399


>ref|XP_002263348.2| PREDICTED: wall-associated receptor kinase 2-like [Vitis vinifera]
          Length = 1182

 Score =  332 bits (851), Expect = 4e-88
 Identities = 186/410 (45%), Positives = 245/410 (59%), Gaps = 14/410 (3%)
 Frame = -2

Query: 1273 MNQDFVKLDRLDGTGTNFNRWKDKLMFFLTALKVAYVLNPDLPEIPPPKDGESDEVKKQR 1094
            MNQD V+LDR DG+  NF RW+DK+ F LTALK+ Y+L+P L  +P PK+ ++ +V   R
Sbjct: 1    MNQDLVRLDRFDGS--NFTRWQDKVRFLLTALKIFYILDPTLAPLPEPKENDTPQVVAAR 58

Query: 1093 EKRQEDEVMCRGHILNTLSDTLYDLFTAVKSPREIWATLEREYASQKQGADKFLIKKYFE 914
            +KR+EDE++CRGHILN LSD LYDL+T   S REIW  LE +Y ++++G  KFLI +Y +
Sbjct: 59   KKREEDELICRGHILNALSDRLYDLYTNTYSAREIWEALENKYKAEEEGTKKFLISQYID 118

Query: 913  FKLDDSSSLMDQIHNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLLHTSEI 734
            FK  D   L+ QIH LQVIV+KLK   +E+ E+ QVGAI+AKLPSSW  Y+K++LH SE 
Sbjct: 119  FKFFDEKPLLPQIHELQVIVNKLKVLKIELPEAFQVGAIVAKLPSSWKGYRKRILHKSED 178

Query: 733  LTISSVLKHLRIEEGARILHKKEFDSDPRVNMVH--------EKKFKNKRKNSEN----- 593
             ++  + KHLRIEE  R   K   +S+   N  +          K  N ++NS N     
Sbjct: 179  YSLEEIQKHLRIEEELRSRDKMAEESNGGTNKANAVSKANHPRGKNNNDKRNSGNYMSPK 238

Query: 592  ADSEDKKKKNRVCYNCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSLGTV 413
             + E  K K   C+ CGK GHY  EC                       EIIA LS   V
Sbjct: 239  KNQEQFKGKKGPCFVCGKLGHYARECRYRKDLKGVVVNAID-------EEIIATLSDVCV 291

Query: 412  TELHLATPTSSKDWWYDSGAAIHVCNDKEQFKNYEILDG-QQVVMANGVRAKVLGRGDVH 236
             +         + WWYD+ A +HV  DK  FK +E   G Q+V M N  R+KVLG+G + 
Sbjct: 292  VQ------GKVQGWWYDTCATVHVTYDKSLFKTFEDAKGDQEVQMGNEGRSKVLGKGTIE 345

Query: 235  LDFTSGKKMVLTNVLHVPDVVKNLVSADILNKKGLKAVLESNNVILSKNG 86
            + FTSGKK+ L NVL+VPD+ KNLVS D+L K G+K V ES+      NG
Sbjct: 346  VVFTSGKKVTLINVLYVPDMNKNLVSGDLLGKPGIKGVFESDVKTAFLNG 395


>emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]
          Length = 1358

 Score =  304 bits (779), Expect = 8e-80
 Identities = 171/437 (39%), Positives = 251/437 (57%), Gaps = 24/437 (5%)
 Frame = -2

Query: 1273 MNQDFVKLDRLDGTGTNFNRWKDKLMFFLTALKVAYVLNPDLPEIPPPKDGESDEVK--- 1103
            MNQ+FVKLDR DG   N+ RW DK+ F L  LK+ Y+L+PDLP IP    GE+ E+    
Sbjct: 1    MNQEFVKLDRFDGQ--NYTRWADKVKFMLVVLKLYYILDPDLPAIPDDPPGEAGELPNED 58

Query: 1102 --KQREKRQEDEVMCRGHILNTLSDTLYDLFTAVKSPREIWATLEREYASQKQGADKFLI 929
              +QR  R+E E +C GHI N+LSD LYDL+  +KS RE+W  LE +Y + ++G +K+LI
Sbjct: 59   LARQRLIRKEAEDLCLGHIKNSLSDRLYDLYAPIKSARELWKALEDKYKAHEEGTNKYLI 118

Query: 928  KKYFEFKLDDSSSLMDQIHNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLL 749
             KY +F++ D  S+++Q+H LQV+V+KL    + + E  QVG IIAKLP  W D+ K+++
Sbjct: 119  AKYLDFQMVDDKSILEQVHELQVLVNKLTALSIPLPEIFQVGVIIAKLPPGWKDFSKRMM 178

Query: 748  HTSEILTISSVLKHLRIEEGARILHKKEFDSDPRVNMV-------------HEKKF---- 620
            H SE  ++  +LKHLRIEE  R   K+       VN V               KKF    
Sbjct: 179  HKSEDYSLDELLKHLRIEEETRNRDKRG-KVGSSVNHVAGGSGQKGKGASSRNKKFTAPK 237

Query: 619  KNKRKNSENADSEDKKKKNRVCYNCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEI 440
            K + K S++ ++   K+  + C+ CG+ GHY  EC                  VE  T +
Sbjct: 238  KKEFKKSQHTNNHQPKRSGK-CHVCGETGHYARECSQRKSGSTVGSTSAID--VEKVTNL 294

Query: 439  IAMLSLGTVTELHLATP-TSSKDWWYDSGAAIHVCNDKEQFKNY-EILDGQQVVMANGVR 266
            +A + LG V  L   T   + + W+ DSGA +HVC ++  F  Y  +  G  VV A+G R
Sbjct: 295  VANVGLGEVNMLSQYTRIVACRGWFLDSGATVHVCGNRGSFLTYAPVPQGTVVVCADGHR 354

Query: 265  AKVLGRGDVHLDFTSGKKMVLTNVLHVPDVVKNLVSADILNKKGLKAVLESNNVILSKNG 86
             +V G+G V L+F  G+ + L +VLHVP + K LVSAD  ++ G K V+++  V  S N 
Sbjct: 355  VEVRGKGTVRLNFRDGQVVTLQDVLHVPGITKGLVSADKFDRNGYKLVIKNLRVKFSLND 414

Query: 85   VFVGKGYSCNGLFKLSI 35
            ++VG+  +  G+++L +
Sbjct: 415  IYVGQAKNTGGMYRLDL 431


>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
          Length = 701

 Score =  280 bits (716), Expect = 2e-72
 Identities = 146/402 (36%), Positives = 241/402 (59%), Gaps = 3/402 (0%)
 Frame = -2

Query: 1231 GTNFNRWKDKLMFFLTALKVAYVLNPDLPEIPPPKDGESD-EVKKQREKRQEDEVMCRGH 1055
            G NF RW+ K+ F+LT L +A  L  D P+   PK+GE+D +V    +     + +C+ +
Sbjct: 47   GQNFKRWQQKMFFYLTTLNLARFLTKDAPK---PKEGETDIQVASAIDAWHHSDFLCKNY 103

Query: 1054 ILNTLSDTLYDLFTAVKSPREIWATLEREYASQKQGADKFLIKKYFEFKLDDSSSLMDQI 875
            ++N LSD+LY+++   K+ +E+W +L+R+Y ++  G  KF++ ++ +FK+ DS +++ Q+
Sbjct: 104  VMNGLSDSLYNVYIGKKTAKELWESLDRKYKTEDAGTKKFVVGRFLDFKMVDSKTVISQV 163

Query: 874  HNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLLHTSEILTISSVLKHLRIE 695
              LQ+I+S++   G+ +SE+ QV AII KLP +W D++  L H  + + I  ++  LRIE
Sbjct: 164  QELQIILSEILAEGMHLSETFQVAAIIEKLPPAWKDFKSYLKHKQKEMNIEGLVVKLRIE 223

Query: 694  EGARILHKKEFDSDPRVNMV-HEKKFKNKRKNSENADSEDKKKKNRVCYNCGKKGHYKAE 518
            E  R   +    S  + N V H  K K K+   +   S+ + K    CYNC K GH  ++
Sbjct: 224  EDNRNAERIGAISMAKANFVEHGPKKKKKKLGPKGGISKKQTKFQGKCYNCDKMGHKASD 283

Query: 517  CXXXXXXXXXXXXXXXXNLVEDATEIIAMLSLGTVTELHLATPTSSKDWWYDSGAAIHVC 338
            C                N+VE+ T+ ++ ++L  V        ++ ++WW D+GA  HVC
Sbjct: 284  C-------RLPKKKREANVVENITQHVSDINLSAVVLEVNMVGSNPREWWIDTGATRHVC 336

Query: 337  NDKEQFKNYEILDG-QQVVMANGVRAKVLGRGDVHLDFTSGKKMVLTNVLHVPDVVKNLV 161
            +DK  F ++E     +++ M N   +++ G+G V L  TSGK++ L NVL+VP++ KNLV
Sbjct: 337  SDKGLFTSFEAASNREKLFMGNSATSEIEGQGKVALKMTSGKELTLNNVLYVPEIRKNLV 396

Query: 160  SADILNKKGLKAVLESNNVILSKNGVFVGKGYSCNGLFKLSI 35
            S  +LNK G + V ES+ V+LSKNG++VGKGY  +GLFKL++
Sbjct: 397  SGSLLNKHGFRMVFESDMVVLSKNGMYVGKGYVNDGLFKLNV 438


>ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854178, partial [Vitis
            vinifera]
          Length = 478

 Score =  278 bits (711), Expect = 6e-72
 Identities = 144/413 (34%), Positives = 246/413 (59%), Gaps = 13/413 (3%)
 Frame = -2

Query: 1234 TGTNFNRWKDKLMFFLTALKVAYVLNPDLPEIPPPKDGESD-EVKKQREKRQEDEVMCRG 1058
            +G NF RW+ K++F+LT L +A  L  D P++   K+ E D +V    +  +  + +CR 
Sbjct: 45   SGINFKRWQQKMLFYLTTLNLARFLTEDAPKL---KEDEHDIQVISAIDAWKHSDFLCRN 101

Query: 1057 HILNTLSDTLYDLFTAVKSPREIWATLEREYASQKQGADKFLIKKYFEFKLDDSSSLMDQ 878
            +++N L+D+LY++++  K+ +E+W +L+R+Y ++  GA KF++ ++ ++K+ DS +++ Q
Sbjct: 102  YVMNGLADSLYNVYSDKKTAKELWESLDRKYKTEDAGAKKFVVGRFLDYKMVDSKTVVSQ 161

Query: 877  IHNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLLHTSEILTISSVLKHLRI 698
            +  LQVI+ ++   G+ +SE+ QV AII KLP +W D++  L H  + ++I  ++  LRI
Sbjct: 162  VQELQVILHEIHAEGMMLSETFQVAAIIEKLPPAWKDFKNYLKHKRKEMSIEDLIIRLRI 221

Query: 697  EEGARILHKKEFD--SDPRVNMVHEKKFKNKRKNSENADS---------EDKKKKNRVCY 551
            EE  R   KK     ++ + N V   +  N + N+                K K    C+
Sbjct: 222  EEDNRRSEKKGAHTLNEAKANFVEHGQSSNAKTNNNKGKGSKLGPKGGISKKPKFQGKCF 281

Query: 550  NCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSLGTVTELHLATPTSSKDW 371
            NCGK+GH   +C                N+++D T+ +  + L TV        ++ K+W
Sbjct: 282  NCGKQGHKSVDC-----RLPKKNKPKEANVIDDITKNVYDIDLTTVVSEVNLVGSNPKEW 336

Query: 370  WYDSGAAIHVCNDKEQFKNYE-ILDGQQVVMANGVRAKVLGRGDVHLDFTSGKKMVLTNV 194
            W D+GA  HVC+DK+ F  +E I +G++V M N   +++ G+G V L  TSGK++ LTNV
Sbjct: 337  WIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMTSGKELTLTNV 396

Query: 193  LHVPDVVKNLVSADILNKKGLKAVLESNNVILSKNGVFVGKGYSCNGLFKLSI 35
            L+VP++ KNLVS  +LN  G + V +SN V+LSK+G++VGKGY  +G++KL++
Sbjct: 397  LYVPEIRKNLVSGSLLNNHGFRLVFDSNKVVLSKSGMYVGKGYMSDGMWKLNV 449


>emb|CAN69855.1| hypothetical protein VITISV_041230 [Vitis vinifera]
          Length = 1236

 Score =  277 bits (708), Expect = 1e-71
 Identities = 173/431 (40%), Positives = 227/431 (52%), Gaps = 14/431 (3%)
 Frame = -2

Query: 1282 IKVMNQDFVKLDRLDGTGTNFNRWKDKLMFFLTALKVAYVLNPDLPEIPPPKDGESDEVK 1103
            IK+MNQD V+LDR DG+  NF RW+DK+ F L ALK+ Y+L+P L  +P PK+ ++ +V 
Sbjct: 6    IKIMNQDLVRLDRFDGS--NFTRWQDKVRFLLIALKIFYILDPILAPLPEPKENDTPQVV 63

Query: 1102 KQREKRQEDEVMCRGHILNTLSDTLYDLFTAVKSPREIWATLEREYASQKQGADKFLIKK 923
              R+KR+EDE++CR                                              
Sbjct: 64   AARKKREEDELICR---------------------------------------------- 77

Query: 922  YFEFKLDDSSSLMDQIHNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLLHT 743
              +FK  D   L+ QIH LQVIV+KLK   +E+  + QVGAI+AKLPSSW  Y+K++ H 
Sbjct: 78   --DFKCFDEKPLLPQIHELQVIVNKLKVLKIELXXAFQVGAIVAKLPSSWKGYRKRIXHK 135

Query: 742  SEILTISSVLKHLRIEEGARILHKKEFDSDPRVNMVH--------EKKFKNKRKNSENAD 587
            SE  ++  + KHL IEE +R   K   +S+   N  +          K  N + NS N  
Sbjct: 136  SEDYSLEEIQKHLXIEEESRSRDKMVEESNXGTNKANAVSKXNHPRXKNNNDKXNSGNYM 195

Query: 586  SEDK-----KKKNRVCYNCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSL 422
            S  K     K K   C+ CGK  HY  EC                       EIIA LS 
Sbjct: 196  SPKKNQEQFKGKKGPCFVCGKPEHYVRECRYRKDQKGAVVNAIDE-------EIIATLSD 248

Query: 421  GTVTELHLATPTSSKDWWYDSGAAIHVCNDKEQFKNYEILDG-QQVVMANGVRAKVLGRG 245
              V +  +      + WWYD+ A IHV   K  FK +E   G Q+V M N  R+KVLG+G
Sbjct: 249  VCVVQGKV------QGWWYDTCATIHVTYYKSXFKTFEDAKGDQEVQMGNEGRSKVLGKG 302

Query: 244  DVHLDFTSGKKMVLTNVLHVPDVVKNLVSADILNKKGLKAVLESNNVILSKNGVFVGKGY 65
             + + FTSGKK+ L NVL+VPD+ KNLVS D L K G+KAV ES  +ILSK+G FVGKGY
Sbjct: 303  TIEVAFTSGKKVTLINVLYVPDMNKNLVSGDFLGKPGIKAVFESGKLILSKSGNFVGKGY 362

Query: 64   SCNGLFKLSIN 32
            SC+G+ KL  N
Sbjct: 363  SCDGMIKLCTN 373


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score =  276 bits (707), Expect = 2e-71
 Identities = 146/413 (35%), Positives = 250/413 (60%), Gaps = 13/413 (3%)
 Frame = -2

Query: 1234 TGTNFNRWKDKLMFFLTALKVAYVLNPDLPEIPPPKDGESD-EVKKQREKRQEDEVMCRG 1058
            +G NF RW+ K++F+LT L +A  L  D P++   K+ E D +V    +  +  + +CR 
Sbjct: 45   SGLNFKRWQQKMLFYLTTLNLARFLTEDAPKL---KEDEHDIQVISAIDAWKHSDFLCRN 101

Query: 1057 HILNTLSDTLYDLFTAVKSPREIWATLEREYASQKQGADKFLIKKYFEFKLDDSSSLMDQ 878
            +++N L+D+LY++++  K+ +E+W +L+R+Y ++  GA KF++ ++ ++K+ DS +++ Q
Sbjct: 102  YVMNGLTDSLYNVYSDKKTAKELWESLDRKYKTEDAGAKKFVVGRFLDYKMVDSKTVVSQ 161

Query: 877  IHNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLLHTSEILTISSVLKHLRI 698
            +  LQVI+ ++   G+ +SE+ QV AII KLP +W D++  L H  + ++I  ++  LRI
Sbjct: 162  VQELQVILHEIHADGMMLSETFQVAAIIEKLPPAWKDFKNYLKHKRKEMSIEDLIIRLRI 221

Query: 697  EEGARILHKKEFD--SDPRVNMV-HEKKFKNKRKNSENADSE--------DKKKKNRVCY 551
            EE  R   KK     ++ + N V H +  K K  N++   S+         K K    C+
Sbjct: 222  EEDNRRSEKKGAHTLNEAQANFVEHGQSSKAKTNNNKGKGSKLGPKGGISKKPKFQGKCF 281

Query: 550  NCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSLGTVTELHLATPTSSKDW 371
            NCGK+GH   +C                N++++ T+ ++ + L TV        ++ K+W
Sbjct: 282  NCGKQGHKSVDC-----RLPKKNKPKEANVIDNITKNVSDIDLTTVVSEVNLVGSNPKEW 336

Query: 370  WYDSGAAIHVCNDKEQFKNYE-ILDGQQVVMANGVRAKVLGRGDVHLDFTSGKKMVLTNV 194
            W D+GA  HVC+DK+ F  +E I +G++V M N   +++ G+G V L  TSGK++ LTNV
Sbjct: 337  WIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSTTSEIKGQGKVILKMTSGKELTLTNV 396

Query: 193  LHVPDVVKNLVSADILNKKGLKAVLESNNVILSKNGVFVGKGYSCNGLFKLSI 35
            L+VP++ KNLV   +LN  G + V ESN V+LSK+G++VGKGY  +G++KL++
Sbjct: 397  LYVPEIRKNLVFGSLLNNHGFRLVFESNKVVLSKSGMYVGKGYMSDGMWKLNV 449


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  276 bits (706), Expect = 2e-71
 Identities = 146/413 (35%), Positives = 248/413 (60%), Gaps = 13/413 (3%)
 Frame = -2

Query: 1234 TGTNFNRWKDKLMFFLTALKVAYVLNPDLPEIPPPKDGESD-EVKKQREKRQEDEVMCRG 1058
            +G NF RW+ K++F+LT L +A  L  D P++   K+ E D +V    +  +  + +CR 
Sbjct: 45   SGLNFKRWQQKMLFYLTTLNLARFLTEDAPKL---KEDEHDIQVISAIDAWKHSDFLCRN 101

Query: 1057 HILNTLSDTLYDLFTAVKSPREIWATLEREYASQKQGADKFLIKKYFEFKLDDSSSLMDQ 878
            +++N L+D+LY++++  K+ +E+W +L+R+Y ++  GA KF++ ++ ++K+ DS +++ Q
Sbjct: 102  YVMNGLADSLYNVYSDKKTAKELWESLDRKYKTEDAGAKKFVVGRFLDYKMVDSKTVVSQ 161

Query: 877  IHNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLLHTSEILTISSVLKHLRI 698
            +  LQVI+ ++   G+ +SE+ QV AII KLP +W D++  L H  + ++I  ++  LRI
Sbjct: 162  VQELQVILHEIHAEGMMLSETFQVAAIIEKLPPAWKDFKNYLKHKRKEMSIEDLIIRLRI 221

Query: 697  EEGARILHKKEFD--SDPRVNMV-HEKKFKNKRKNSENADSE--------DKKKKNRVCY 551
            EE  R   KK     ++ + N V H +  K K  N++   S+         K K    C+
Sbjct: 222  EEDNRRSEKKGAHTLNEAKANFVEHGQSSKAKTNNNKGKGSKLGPKGGISKKPKFQGKCF 281

Query: 550  NCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSLGTVTELHLATPTSSKDW 371
            NCGK+GH   +C                N+++D T+ +  + L  V        ++ K+W
Sbjct: 282  NCGKQGHKSVDC-----RLPKKNKPKEANVIDDITKNVYDIDLTAVVSEVNLVGSNPKEW 336

Query: 370  WYDSGAAIHVCNDKEQFKNYE-ILDGQQVVMANGVRAKVLGRGDVHLDFTSGKKMVLTNV 194
            W D+GA  HVC+DK+ F  +E I +G++V M N   +++ G+G V L  TSGK++ LTNV
Sbjct: 337  WIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMTSGKELTLTNV 396

Query: 193  LHVPDVVKNLVSADILNKKGLKAVLESNNVILSKNGVFVGKGYSCNGLFKLSI 35
            L+VP++ KNLVS  +LN  G + V  SN V+LSK+G++VGKGY  +G++KL++
Sbjct: 397  LYVPEIRKNLVSGSLLNNHGFRLVFXSNKVVLSKSGMYVGKGYMSDGMWKLNV 449


>ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
          Length = 946

 Score =  275 bits (703), Expect = 5e-71
 Identities = 145/413 (35%), Positives = 248/413 (60%), Gaps = 13/413 (3%)
 Frame = -2

Query: 1234 TGTNFNRWKDKLMFFLTALKVAYVLNPDLPEIPPPKDGESD-EVKKQREKRQEDEVMCRG 1058
            +G NF RW+ K++F+LT L +A  L  D P++   K+ E D +V    +  +  + +CR 
Sbjct: 45   SGLNFKRWQQKMLFYLTTLNLARFLTEDAPKL---KEDEHDIQVISAIDAWKHSDFLCRN 101

Query: 1057 HILNTLSDTLYDLFTAVKSPREIWATLEREYASQKQGADKFLIKKYFEFKLDDSSSLMDQ 878
            +++N L+D+LY++++  K  +E+W +L+R+Y ++  GA KF++ ++ ++K+ DS +++ Q
Sbjct: 102  YVMNGLADSLYNVYSDKKIAKELWESLDRKYKTEDAGAKKFVVGRFLDYKMVDSKTVVSQ 161

Query: 877  IHNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLLHTSEILTISSVLKHLRI 698
            +  LQVI+ ++   G+ +SE+ QV AII KLP +W D++  L H  + ++I  ++  LRI
Sbjct: 162  VQELQVILHEIHAEGMMLSETFQVAAIIEKLPPAWKDFKNCLKHKRKEMSIEDLIIRLRI 221

Query: 697  EEGARILHKKEFD--SDPRVNMV-HEKKFKNKRKNSENADSE--------DKKKKNRVCY 551
            EE  R   KK     ++ + N V H +  K K  N++   S+         K K    C+
Sbjct: 222  EEDNRRSEKKGVHTLNEAKANFVEHGQSSKAKTNNNKGKGSKLGPKGGISKKPKFQGKCF 281

Query: 550  NCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSLGTVTELHLATPTSSKDW 371
            NCGK+GH   +C                N++++ T+ ++ + L  V        ++ K+W
Sbjct: 282  NCGKQGHKSVDC-----RLPKKNKPKEANVIDNITKNVSNIDLTAVVSEVNLVGSNPKEW 336

Query: 370  WYDSGAAIHVCNDKEQFKNYE-ILDGQQVVMANGVRAKVLGRGDVHLDFTSGKKMVLTNV 194
            W D+GA  HVC+DK+ F  +E I +G++V M N   +++ G+G V L  TSGK++ LTNV
Sbjct: 337  WIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSTTSEIKGQGKVILKMTSGKELTLTNV 396

Query: 193  LHVPDVVKNLVSADILNKKGLKAVLESNNVILSKNGVFVGKGYSCNGLFKLSI 35
            L+VP++ KNLVS  +LN  G + V ESN  +LSK+G++VGKGY  +G++KL++
Sbjct: 397  LYVPEIRKNLVSGSLLNNHGFRLVFESNKFVLSKSGMYVGKGYMSDGMWKLNV 449


>gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1038

 Score =  273 bits (699), Expect = 2e-70
 Identities = 167/461 (36%), Positives = 239/461 (51%), Gaps = 40/461 (8%)
 Frame = -2

Query: 1285 AIKVMNQ---DFVKLDRLDGTGTNFNRWKDKLMFFLTALKVAYVLNPDLPEIPPP----- 1130
            +IK  N+   D  KL+ LDGT  N+ RW  KL+ F   L+V YVL  DLP   PP     
Sbjct: 2    SIKTSNKILPDLSKLEPLDGT--NYRRWSQKLLIFFKQLEVDYVLTTDLPTSDPPTTTST 59

Query: 1129 -KDGES-----------DEVKKQR----EKRQEDEVMCRGHILNTLSDTLYDLFTAVKSP 998
              D ES           D+VKK +    EK  +D    RGH+LN +SD ++DLF   KS 
Sbjct: 60   SSDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSA 119

Query: 997  REIWATLEREYASQKQGADKFLIKKYFEFKLDDSSSLMDQIHNLQVIVSKLKDYGVEISE 818
            ++IW+TLE  Y     G  K+++ K+ +F++ D   +++QIH  + +V+ +   G+++ E
Sbjct: 120  KDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVTNVLSEGMKMCE 179

Query: 817  SMQVGAIIAKLPSSWNDYQKKLLHTSEILTISSVLKHLRIEEGARI-------------- 680
             +Q   ++ K P SWNDY+  L H  + L +  ++ H+R EE  R+              
Sbjct: 180  ILQANVLLEKFPPSWNDYRNHLKHKKKDLKLHELISHMRTEEANRLKDKLASQNLNSVNA 239

Query: 679  -LHKKEFDSDPRVNMVHEKKFKNKRKNSENADSEDKKKKNRVCYNCGKKGHYKAECXXXX 503
             L +  F +  R       K KN  K          KKK  VCY C K+GH   +C    
Sbjct: 240  NLVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCRKEGHKSYQC-NQR 298

Query: 502  XXXXXXXXXXXXNLVEDATEIIAMLSLGTVTELHLATPTSSKDWWYDSGAAIHVCNDKEQ 323
                        NL E  +EIIA +    + E       +  DW  D+GA+ H C ++E 
Sbjct: 299  KGRPSQKPTPQANLAEQDSEIIAAIVEANLIE-------NKTDWILDTGASRHFCTNREL 351

Query: 322  FKNYE-ILDGQQVVMANGVRAKVLGRGDVHLDFTSGKKMVLTNVLHVPDVVKNLVSADIL 146
              +YE  +DG+ V M N   A V+G+G V L  TSGK + L+NVL+VP + +NLVS  +L
Sbjct: 352  LHDYEDTVDGECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLL 411

Query: 145  NKKGLKAVLESNNVILSKNGVFVGKGYSCNGLFKLSINKVN 23
            N+ GLK VLE + V+L+KNG FVGKGY  NGLF L+   +N
Sbjct: 412  NRAGLKIVLEGDKVVLTKNGNFVGKGYLSNGLFVLNTISMN 452


>gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea mays]
          Length = 1309

 Score =  259 bits (661), Expect = 4e-66
 Identities = 147/439 (33%), Positives = 231/439 (52%), Gaps = 9/439 (2%)
 Frame = -2

Query: 1303 ESTQESAIKVMNQDFVKLDRLDGTGTNFNRWKDKLMFFLTALKVAYVLNPDLPEIPPPKD 1124
            +S +   I   + D +K +  DG   +F RW+ K   +LT LK+ +V+   +P+      
Sbjct: 10   QSRKPICIMASSSDVIKPEAFDGA--SFKRWQIKTRMWLTDLKLFWVVTSAVPQAASDDS 67

Query: 1123 GESDEVKKQREKRQEDEV--MCRGHILNTLSDTLYDLFTAVKSPREIWATLEREYASQKQ 950
             ++ +     EK + DE    C   +LN LS+ L+D+++A  S + +W  LE E++    
Sbjct: 68   DDAAKAAALAEKAKWDEANEACLSRLLNVLSNRLFDVYSAFTSAKGLWTDLENEFSEVDN 127

Query: 949  GADKFLIKKYFEFKLDDSSSLMDQIHNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWN 770
            G + F  + Y  +K+ +  S+M+Q+  +Q++V  L  YG  + +S QV AI+AKLP SW 
Sbjct: 128  GNESFTTENYLNYKMVEGRSVMEQLQEIQLLVRDLVQYGCVLPDSFQVNAILAKLPPSWR 187

Query: 769  DYQKKLLHTSEILTISSVLKHLRIEEGARILHKKEFDSDPRV-NMVHEKKFKNKRKNSEN 593
            D+     H  + +T++ +   + +EE AR  +K        V     ++KF+ K+KNS  
Sbjct: 188  DFVTSRRHMKKQMTLTELSAAINVEERARSSNKPSQQLQAHVVEKGGDRKFQKKKKNSPQ 247

Query: 592  ADSED------KKKKNRVCYNCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAM 431
             +         KKK++ +CY CG  GH    C                 +V         
Sbjct: 248  KNLNQPKSKKMKKKEDFICYVCGVSGHTARRCKLRKGKGPPPQRKEGNVVVNSTP----- 302

Query: 430  LSLGTVTELHLATPTSSKDWWYDSGAAIHVCNDKEQFKNYEILDGQQVVMANGVRAKVLG 251
               G   +  +A+P  S DWW DSGA +H+C D+  F +++  +   V+M NGV A V G
Sbjct: 303  ---GYALQAFMASP--SDDWWMDSGATVHICADRSMFSSFQGFNSAPVLMGNGVPAAVRG 357

Query: 250  RGDVHLDFTSGKKMVLTNVLHVPDVVKNLVSADILNKKGLKAVLESNNVILSKNGVFVGK 71
             G V+L  TSGK +VL +VL+VP + +NL+S  +L ++GLK V ESN V+LSK G FVGK
Sbjct: 358  TGQVYLKLTSGKTLVLKDVLYVPSMSRNLISVSLLCRQGLKLVFESNKVVLSKFGTFVGK 417

Query: 70   GYSCNGLFKLSINKVNNVS 14
             Y   GLF+LS+  +NN S
Sbjct: 418  SYESGGLFRLSV--LNNHS 434


>gb|AAP54028.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1361

 Score =  234 bits (596), Expect = 1e-58
 Identities = 136/423 (32%), Positives = 222/423 (52%), Gaps = 19/423 (4%)
 Frame = -2

Query: 1231 GTNFNRWKDKLMFFLTALKVAYVLNPDLPEIPPPKDGESDEVKKQREKRQEDEVMCRGHI 1052
            G+N+ RWK + + +LTA++  YV      E  PP   E D       K +  + + RG +
Sbjct: 151  GSNYKRWKARALLWLTAMQCFYVSRGKRSE--PPLSPEEDA------KFEASDCLFRGAL 202

Query: 1051 LNTLSDTLYDLFTAVKSPREIWATLEREYASQKQGADKFLIKKYFEFKLDDSSSLMDQIH 872
            ++ L+D + D++  + S +++W  LE ++     G++ +++++++++K+ D  S+++Q H
Sbjct: 203  ISVLADNIVDVYMHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDDRSVVEQAH 262

Query: 871  NLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLLHTSEILTISSVLKHLRIEE 692
             +Q++  +L++   E+ +    G IIAKLP SW+D+   L H  +  ++  ++  L +EE
Sbjct: 263  EIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVPDLIGSLGVEE 322

Query: 691  GARI--LHKKEFDSDPRVNMVHEKK----FKNKR-------KNSENADSEDKKKKNRVCY 551
             AR   +  K+ +     NMV +K       NK+       K + N   + K K    C+
Sbjct: 323  KARAKDIRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKGKGKAKGDCF 382

Query: 550  NCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSLGTVTELH---LATPTS- 383
             CGK GH+  +C                   +D      ++S G  T  +   L T  S 
Sbjct: 383  VCGKSGHWAKDCPER----------------KDRKSANMIISEGGGTSGYGKILPTVLSV 426

Query: 382  --SKDWWYDSGAAIHVCNDKEQFKNYEILDGQQVVMANGVRAKVLGRGDVHLDFTSGKKM 209
              S DWW D+G  IHVC D   F +Y++  G  ++M NG+ A V G G V L FTSGK +
Sbjct: 427  FHSPDWWVDTGTNIHVCADISLFSSYQVGRGSSLLMGNGLLAAVHGVGTVDLKFTSGKTV 486

Query: 208  VLTNVLHVPDVVKNLVSADILNKKGLKAVLESNNVILSKNGVFVGKGYSCNGLFKLSINK 29
             L NV HVP + KNLVS  +L ++G + V ESN  ++SK G FVGKGY   GLF+ S+N 
Sbjct: 487  QLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSLND 546

Query: 28   VNN 20
            + N
Sbjct: 547  MCN 549


>gb|ABA97124.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1453

 Score =  233 bits (594), Expect = 2e-58
 Identities = 135/423 (31%), Positives = 222/423 (52%), Gaps = 19/423 (4%)
 Frame = -2

Query: 1231 GTNFNRWKDKLMFFLTALKVAYVLNPDLPEIPPPKDGESDEVKKQREKRQEDEVMCRGHI 1052
            G+N+ RWK + + +LTA++  YV      E P   + E+        K +  + + RG +
Sbjct: 169  GSNYKRWKARALLWLTAMQCFYVSRGKRSEPPLSPEEEA--------KFEASDCLFRGAL 220

Query: 1051 LNTLSDTLYDLFTAVKSPREIWATLEREYASQKQGADKFLIKKYFEFKLDDSSSLMDQIH 872
            ++ L+D + D++  + S +++W  LE ++     G++ +++++++++K+ D  S+++Q H
Sbjct: 221  ISVLADNIVDVYMHMPSGKDMWDALEAKFGVSDAGSELYIMEQFYDYKMVDDRSVVEQAH 280

Query: 871  NLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLLHTSEILTISSVLKHLRIEE 692
             +Q++  +L++   E+ +    G IIAKLP SW+D+   L H  +  ++  ++  L +EE
Sbjct: 281  EIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVPDLIGSLGVEE 340

Query: 691  GARI--LHKKEFDSDPRVNMVHEKK----FKNKR-------KNSENADSEDKKKKNRVCY 551
             AR   +  K+ +     NMV +K       NK+       K + N   + K K    C+
Sbjct: 341  KARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKGKGKAKGDCF 400

Query: 550  NCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSLGTVTELH---LATPTS- 383
             CGK GH+  +C                   +D      ++S G  T  +   L T  S 
Sbjct: 401  VCGKSGHWAKDCPER----------------KDRKSANMIISEGGGTSGYGKILPTVLSV 444

Query: 382  --SKDWWYDSGAAIHVCNDKEQFKNYEILDGQQVVMANGVRAKVLGRGDVHLDFTSGKKM 209
              S DWW D+GA IHVC D   F +Y++  G  ++M NG  A V G G V L FTSGK +
Sbjct: 445  FHSPDWWVDTGANIHVCADISLFSSYQVERGSSLLMGNGSLAAVHGVGTVDLKFTSGKTV 504

Query: 208  VLTNVLHVPDVVKNLVSADILNKKGLKAVLESNNVILSKNGVFVGKGYSCNGLFKLSINK 29
             L NV HVP + KNLVS  +L ++G + V ESN  ++SK G FVGKGY   GLF+ S+N 
Sbjct: 505  QLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSLND 564

Query: 28   VNN 20
            + N
Sbjct: 565  MCN 567


>gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1298

 Score =  233 bits (593), Expect = 3e-58
 Identities = 135/423 (31%), Positives = 222/423 (52%), Gaps = 19/423 (4%)
 Frame = -2

Query: 1231 GTNFNRWKDKLMFFLTALKVAYVLNPDLPEIPPPKDGESDEVKKQREKRQEDEVMCRGHI 1052
            G+N+ RWK + + +LTA++  YV      E P   + E+        K +  + + RG +
Sbjct: 129  GSNYKRWKARALLWLTAMQCFYVSRGKRSEPPLSPEEEA--------KFEASDCLFRGAL 180

Query: 1051 LNTLSDTLYDLFTAVKSPREIWATLEREYASQKQGADKFLIKKYFEFKLDDSSSLMDQIH 872
            ++ L+D + D++  + S +++W  LE ++     G++ +++++++++K+ D  S+++Q H
Sbjct: 181  ISVLADNIVDVYMHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDDRSVVEQAH 240

Query: 871  NLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLLHTSEILTISSVLKHLRIEE 692
             +Q++  +L++   E+ +    G IIAKLP SW+D+   L H  +  ++  ++  L +EE
Sbjct: 241  EIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVPDLIGSLGVEE 300

Query: 691  GARI--LHKKEFDSDPRVNMVHEKK----FKNKR-------KNSENADSEDKKKKNRVCY 551
             AR   +  K+ +     NMV +K       NK+       K + N   + K K    C+
Sbjct: 301  KARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKSKGKAKGDCF 360

Query: 550  NCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSLGTVTELH---LATPTS- 383
             CGK GH+  +C                   +D      ++S G  T  +   L T  S 
Sbjct: 361  VCGKSGHWAKDCPER----------------KDRKSANMIISEGGGTSGYGKILPTVLSV 404

Query: 382  --SKDWWYDSGAAIHVCNDKEQFKNYEILDGQQVVMANGVRAKVLGRGDVHLDFTSGKKM 209
              S DWW D+GA IHVC D   F +Y++  G  ++M NG  A V G G V L FTSGK +
Sbjct: 405  FHSPDWWVDTGANIHVCADISLFSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKTV 464

Query: 208  VLTNVLHVPDVVKNLVSADILNKKGLKAVLESNNVILSKNGVFVGKGYSCNGLFKLSINK 29
             L NV HVP + KNLVS  +L ++G + V ESN  ++SK G FVGKGY   GLF+ S+N 
Sbjct: 465  QLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSLND 524

Query: 28   VNN 20
            + N
Sbjct: 525  MCN 527


>gb|ABA96250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1287

 Score =  233 bits (593), Expect = 3e-58
 Identities = 136/426 (31%), Positives = 223/426 (52%), Gaps = 19/426 (4%)
 Frame = -2

Query: 1240 DGTGTNFNRWKDKLMFFLTALKVAYVLNPDLPEIPPPKDGESDEVKKQREKRQEDEVMCR 1061
            D  G+N+ RWK + + +LTA++  YV      E P   + E+        K +  + + R
Sbjct: 126  DFDGSNYKRWKARALLWLTAMQCFYVSRGKRSEPPLSPEEEA--------KFEASDCLFR 177

Query: 1060 GHILNTLSDTLYDLFTAVKSPREIWATLEREYASQKQGADKFLIKKYFEFKLDDSSSLMD 881
            G +++ L+D + D++  + S +++W  LE ++     G++ +++++++++K+ D  S+++
Sbjct: 178  GALISVLADNIVDVYMHMPSRKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDDRSVVE 237

Query: 880  QIHNLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLLHTSEILTISSVLKHLR 701
            Q H +Q++  +L++   E+ +    G IIAKLP SW+D+   L H  +  ++  ++  L 
Sbjct: 238  QAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVPDLIGSLG 297

Query: 700  IEEGARI--LHKKEFDSDPRVNMVHEKK----FKNKR-------KNSENADSEDKKKKNR 560
            +EE AR   +  K+ +     NMV +K       NK+       K + N   + K K   
Sbjct: 298  VEEKARAKDVRGKKVEGGCSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKSKGKAKG 357

Query: 559  VCYNCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSLGTVTELH---LATP 389
             C+ CGK GH+  +C                   +D      ++S G  T  +   L T 
Sbjct: 358  DCFVCGKSGHWAKDCPER----------------KDKKSANMIISEGGGTSGYGKILPTV 401

Query: 388  TS---SKDWWYDSGAAIHVCNDKEQFKNYEILDGQQVVMANGVRAKVLGRGDVHLDFTSG 218
             S   S DWW D+GA IHVC D   F +Y++  G  ++M NG  A V G G V L FTSG
Sbjct: 402  LSVFHSPDWWVDTGANIHVCADISLFSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFTSG 461

Query: 217  KKMVLTNVLHVPDVVKNLVSADILNKKGLKAVLESNNVILSKNGVFVGKGYSCNGLFKLS 38
            K + L NV HVP + KNLVS  +L ++G + V ESN  ++SK G FVGKGY   GLF+ S
Sbjct: 462  KTVQLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFS 521

Query: 37   INKVNN 20
            +N + N
Sbjct: 522  LNDMCN 527


>gb|AAS07202.1| putative integrase [Oryza sativa Japonica Group]
            gi|108708916|gb|ABF96711.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1456

 Score =  233 bits (593), Expect = 3e-58
 Identities = 135/423 (31%), Positives = 223/423 (52%), Gaps = 19/423 (4%)
 Frame = -2

Query: 1231 GTNFNRWKDKLMFFLTALKVAYVLNPDLPEIPPPKDGESDEVKKQREKRQEDEVMCRGHI 1052
            G+N+ RWK + + +LTA++  YV      E P   + E+        K +  + + RG +
Sbjct: 172  GSNYKRWKARALLWLTAMQCFYVSRGKRSEPPLSPEEEA--------KFEASDCLFRGAL 223

Query: 1051 LNTLSDTLYDLFTAVKSPREIWATLEREYASQKQGADKFLIKKYFEFKLDDSSSLMDQIH 872
            ++ L+D + D++  + S +++W +LE ++     G++ +++++++++K+ D  S+++Q H
Sbjct: 224  ISVLADNIVDVYMHMPSGKDMWDSLEAKFGVSDAGSELYVMEQFYDYKMVDDRSVVEQAH 283

Query: 871  NLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLLHTSEILTISSVLKHLRIEE 692
             +Q++  +L++   E+ +    G IIAKLP SW+D+   L H  +  ++  ++  L +EE
Sbjct: 284  EIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVPDLIGSLGVEE 343

Query: 691  GARI--LHKKEFDSDPRVNMVHEKK----FKNKR-------KNSENADSEDKKKKNRVCY 551
             AR   +  K+ +     NMV +K       NK+       K + N   + K K    C+
Sbjct: 344  KARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKGKGKAKGDCF 403

Query: 550  NCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSLGTVTELH---LATPTS- 383
             CGK GH+  +C                   +D      ++S G  T  +   L T  S 
Sbjct: 404  VCGKSGHWAKDCPER----------------KDRKSANMIISEGGGTSGYGKILPTVLSV 447

Query: 382  --SKDWWYDSGAAIHVCNDKEQFKNYEILDGQQVVMANGVRAKVLGRGDVHLDFTSGKKM 209
              S DWW D+GA IHVC D   F +Y++  G  ++M NG  A V G G V L FTSGK +
Sbjct: 448  FHSPDWWVDTGANIHVCADISLFSSYQVGRGSSLLMVNGSLAAVHGVGTVDLKFTSGKTV 507

Query: 208  VLTNVLHVPDVVKNLVSADILNKKGLKAVLESNNVILSKNGVFVGKGYSCNGLFKLSINK 29
             L NV HVP + KNLVS  +L ++G + V ESN  ++SK G FVGKGY   GLF+ S+N 
Sbjct: 508  QLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSLND 567

Query: 28   VNN 20
            + N
Sbjct: 568  MCN 570


>emb|CAH66912.1| OSIGBa0126B18.5 [Oryza sativa Indica Group]
          Length = 1413

 Score =  231 bits (590), Expect = 7e-58
 Identities = 135/423 (31%), Positives = 222/423 (52%), Gaps = 19/423 (4%)
 Frame = -2

Query: 1231 GTNFNRWKDKLMFFLTALKVAYVLNPDLPEIPPPKDGESDEVKKQREKRQEDEVMCRGHI 1052
            G+N+ RWK + + +LTA++  YV      E P   + E+        K +  + + RG +
Sbjct: 129  GSNYKRWKARALLWLTAMQCFYVSRGKRSEPPLSPEEEA--------KFEASDCLFRGAL 180

Query: 1051 LNTLSDTLYDLFTAVKSPREIWATLEREYASQKQGADKFLIKKYFEFKLDDSSSLMDQIH 872
            ++ L+D + D++  + S +++W  LE ++     G++ +++++++++K+ D  S+++Q H
Sbjct: 181  ISVLADNIVDVYMHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDDRSVVEQAH 240

Query: 871  NLQVIVSKLKDYGVEISESMQVGAIIAKLPSSWNDYQKKLLHTSEILTISSVLKHLRIEE 692
             +Q++  +L++   E+ +    G IIAKLP SW+D+   L H  +  ++  ++  L +EE
Sbjct: 241  EIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVPDLIGSLGVEE 300

Query: 691  GARI--LHKKEFDSDPRVNMVHEKK----FKNKR-------KNSENADSEDKKKKNRVCY 551
             AR   +  K+ +     NMV +K       NK+       K + N   + K K    C+
Sbjct: 301  KARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKSKGKAKGDCF 360

Query: 550  NCGKKGHYKAECXXXXXXXXXXXXXXXXNLVEDATEIIAMLSLGTVTELH---LATPTS- 383
             CGK GH+  +C                   +D      ++S G  T  +   L T  S 
Sbjct: 361  VCGKSGHWAKDCPER----------------KDRKSANMIISEGGGTSGYGKILPTVLSV 404

Query: 382  --SKDWWYDSGAAIHVCNDKEQFKNYEILDGQQVVMANGVRAKVLGRGDVHLDFTSGKKM 209
              S DWW D+GA IHVC D   F +Y++  G  ++M NG  A V G G V L FTSGK +
Sbjct: 405  FHSPDWWVDTGANIHVCADISLFSSYQVGRGFSLLMGNGSLAAVHGVGTVDLKFTSGKTV 464

Query: 208  VLTNVLHVPDVVKNLVSADILNKKGLKAVLESNNVILSKNGVFVGKGYSCNGLFKLSINK 29
             L NV HVP + KNLVS  +L ++G + V ESN  ++SK G FVGKGY   GLF+ S+N 
Sbjct: 465  QLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSLND 524

Query: 28   VNN 20
            + N
Sbjct: 525  MCN 527