BLASTX nr result

ID: Rehmannia25_contig00008780 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00008780
         (821 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006359092.1| PREDICTED: heterogeneous nuclear ribonucleop...    73   1e-10
ref|XP_004231546.1| PREDICTED: polyadenylate-binding protein 4-l...    68   3e-09

>ref|XP_006359092.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Solanum
           tuberosum]
          Length = 424

 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 36/54 (66%), Positives = 39/54 (72%), Gaps = 3/54 (5%)
 Frame = +3

Query: 318 YRVPPSSIGMQSSGGYPDSGNYGFQSAYPPQPNHPAGPGSRLP---AYQGMPPY 470
           YR+P SS GM SSGGYPD GNYG QS+YP Q   P G GSR+P    YQGMPPY
Sbjct: 371 YRMPQSSAGMPSSGGYPDGGNYGLQSSYPSQVPQP-GAGSRVPPGGMYQGMPPY 423


>ref|XP_004231546.1| PREDICTED: polyadenylate-binding protein 4-like isoform 1 [Solanum
           lycopersicum] gi|460371445|ref|XP_004231547.1|
           PREDICTED: polyadenylate-binding protein 4-like isoform
           2 [Solanum lycopersicum]
           gi|460371447|ref|XP_004231548.1| PREDICTED:
           polyadenylate-binding protein 4-like isoform 3 [Solanum
           lycopersicum] gi|460371449|ref|XP_004231549.1|
           PREDICTED: polyadenylate-binding protein 4-like isoform
           4 [Solanum lycopersicum]
          Length = 424

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 34/54 (62%), Positives = 38/54 (70%), Gaps = 3/54 (5%)
 Frame = +3

Query: 318 YRVPPSSIGMQSSGGYPDSGNYGFQSAYPPQPNHPAGPGSRLP---AYQGMPPY 470
           YR+P SS GM SSGG+PD G+Y  QSAYP Q   P G GSR+P    YQGMPPY
Sbjct: 371 YRMPQSSAGMPSSGGFPDGGSYALQSAYPTQVPQP-GAGSRVPPGGMYQGMPPY 423


Top