BLASTX nr result
ID: Rehmannia25_contig00007758
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00007758
(980 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002300922.2| hypothetical protein POPTR_0002s06940g [Popu... 144 5e-32
ref|XP_006434453.1| hypothetical protein CICLE_v10002950mg [Citr... 141 4e-31
ref|XP_002307496.1| small nuclear ribonucleoprotein [Populus tri... 141 4e-31
gb|EOY16704.1| Small nuclear ribonucleoprotein family protein [T... 140 1e-30
gb|EPS65101.1| hypothetical protein M569_09680 [Genlisea aurea] 139 2e-30
ref|XP_004513701.1| PREDICTED: U6 snRNA-associated Sm-like prote... 139 2e-30
ref|XP_003607812.1| U6 snRNA-associated Sm-like protein LSm3 [Me... 139 2e-30
ref|XP_004290522.1| PREDICTED: U6 snRNA-associated Sm-like prote... 139 2e-30
gb|AFK35032.1| unknown [Lotus japonicus] gi|388511495|gb|AFK4380... 139 2e-30
ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycin... 139 2e-30
ref|XP_002532432.1| snrnp sm protein, putative [Ricinus communis... 139 2e-30
gb|EXC25394.1| hypothetical protein L484_016776 [Morus notabilis] 138 4e-30
gb|EMJ01842.1| hypothetical protein PRUPE_ppa013901mg [Prunus pe... 138 4e-30
ref|XP_004249874.1| PREDICTED: U6 snRNA-associated Sm-like prote... 138 4e-30
ref|NP_001236557.1| uncharacterized protein LOC100306547 [Glycin... 137 8e-30
gb|ESW24417.1| hypothetical protein PHAVU_004G129000g [Phaseolus... 135 2e-29
ref|XP_004160308.1| PREDICTED: U6 snRNA-associated Sm-like prote... 135 2e-29
ref|XP_003564691.1| PREDICTED: U6 snRNA-associated Sm-like prote... 135 2e-29
ref|XP_001755214.1| predicted protein [Physcomitrella patens] gi... 135 3e-29
ref|XP_004970703.1| PREDICTED: U6 snRNA-associated Sm-like prote... 134 5e-29
>ref|XP_002300922.2| hypothetical protein POPTR_0002s06940g [Populus trichocarpa]
gi|550344440|gb|EEE80195.2| hypothetical protein
POPTR_0002s06940g [Populus trichocarpa]
Length = 133
Score = 144 bits (363), Expect = 5e-32
Identities = 77/109 (70%), Positives = 81/109 (74%)
Frame = -2
Query: 544 PNTEEETQEKRKMGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMI 365
P + E+++M SEEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLNMI
Sbjct: 25 PKKIQSELERKRMASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMI 84
Query: 364 LGXXXXXXXXXXXXXXXXXXXVRTTRRTVPFLFVRGDGVILVSPPLRTA 218
LG VR TRRTVPFLFVRGDGVILVSPPLRTA
Sbjct: 85 LGDVEEIVTTVEIDDETYEEIVRATRRTVPFLFVRGDGVILVSPPLRTA 133
>ref|XP_006434453.1| hypothetical protein CICLE_v10002950mg [Citrus clementina]
gi|568838092|ref|XP_006473051.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm3-like [Citrus
sinensis] gi|557536575|gb|ESR47693.1| hypothetical
protein CICLE_v10002950mg [Citrus clementina]
Length = 97
Score = 141 bits (355), Expect = 4e-31
Identities = 76/97 (78%), Positives = 76/97 (78%)
Frame = -2
Query: 508 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILGXXXXXXXXXX 329
M SEEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLNMILG
Sbjct: 1 MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEVVTTVE 60
Query: 328 XXXXXXXXXVRTTRRTVPFLFVRGDGVILVSPPLRTA 218
VRTTRRTVPFLFVRGDGVILVSPPLRTA
Sbjct: 61 IDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRTA 97
>ref|XP_002307496.1| small nuclear ribonucleoprotein [Populus trichocarpa]
gi|359493111|ref|XP_002266320.2| PREDICTED: U6
snRNA-associated Sm-like protein LSm3-like isoform 1
[Vitis vinifera] gi|222856945|gb|EEE94492.1| small
nuclear ribonucleoprotein [Populus trichocarpa]
Length = 97
Score = 141 bits (355), Expect = 4e-31
Identities = 76/97 (78%), Positives = 76/97 (78%)
Frame = -2
Query: 508 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILGXXXXXXXXXX 329
M SEEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLNMILG
Sbjct: 1 MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVE 60
Query: 328 XXXXXXXXXVRTTRRTVPFLFVRGDGVILVSPPLRTA 218
VRTTRRTVPFLFVRGDGVILVSPPLRTA
Sbjct: 61 IDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRTA 97
>gb|EOY16704.1| Small nuclear ribonucleoprotein family protein [Theobroma cacao]
Length = 97
Score = 140 bits (352), Expect = 1e-30
Identities = 75/97 (77%), Positives = 76/97 (78%)
Frame = -2
Query: 508 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILGXXXXXXXXXX 329
M SE+ESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLNMILG
Sbjct: 1 MASEDESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVE 60
Query: 328 XXXXXXXXXVRTTRRTVPFLFVRGDGVILVSPPLRTA 218
VRTTRRTVPFLFVRGDGVILVSPPLRTA
Sbjct: 61 IDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRTA 97
>gb|EPS65101.1| hypothetical protein M569_09680 [Genlisea aurea]
Length = 97
Score = 139 bits (350), Expect = 2e-30
Identities = 73/97 (75%), Positives = 76/97 (78%)
Frame = -2
Query: 508 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILGXXXXXXXXXX 329
MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILG
Sbjct: 1 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILGDVEETVTTVE 60
Query: 328 XXXXXXXXXVRTTRRTVPFLFVRGDGVILVSPPLRTA 218
VR T+R VPFLFVRGDGVILV+PPLRT+
Sbjct: 61 IDDETYEEIVRNTKRIVPFLFVRGDGVILVAPPLRTS 97
>ref|XP_004513701.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Cicer
arietinum]
Length = 98
Score = 139 bits (350), Expect = 2e-30
Identities = 74/96 (77%), Positives = 76/96 (79%)
Frame = -2
Query: 505 GSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILGXXXXXXXXXXX 326
G+EEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLNMILG
Sbjct: 3 GAEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEI 62
Query: 325 XXXXXXXXVRTTRRTVPFLFVRGDGVILVSPPLRTA 218
VRTT+RTVPFLFVRGDGVILVSPPLRTA
Sbjct: 63 DDETYEEIVRTTKRTVPFLFVRGDGVILVSPPLRTA 98
>ref|XP_003607812.1| U6 snRNA-associated Sm-like protein LSm3 [Medicago truncatula]
gi|355508867|gb|AES90009.1| U6 snRNA-associated Sm-like
protein LSm3 [Medicago truncatula]
Length = 98
Score = 139 bits (350), Expect = 2e-30
Identities = 74/96 (77%), Positives = 76/96 (79%)
Frame = -2
Query: 505 GSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILGXXXXXXXXXXX 326
G+EEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLNMILG
Sbjct: 3 GTEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEI 62
Query: 325 XXXXXXXXVRTTRRTVPFLFVRGDGVILVSPPLRTA 218
VRTT+RTVPFLFVRGDGVILVSPPLRTA
Sbjct: 63 DDETYEEIVRTTKRTVPFLFVRGDGVILVSPPLRTA 98
>ref|XP_004290522.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Fragaria
vesca subsp. vesca]
Length = 97
Score = 139 bits (349), Expect = 2e-30
Identities = 74/97 (76%), Positives = 76/97 (78%)
Frame = -2
Query: 508 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILGXXXXXXXXXX 329
M SEEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLNMILG
Sbjct: 1 MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTSVE 60
Query: 328 XXXXXXXXXVRTTRRTVPFLFVRGDGVILVSPPLRTA 218
VRTT+RTVP+LFVRGDGVILVSPPLRTA
Sbjct: 61 IDDETYEEIVRTTKRTVPYLFVRGDGVILVSPPLRTA 97
>gb|AFK35032.1| unknown [Lotus japonicus] gi|388511495|gb|AFK43809.1| unknown
[Lotus japonicus]
Length = 97
Score = 139 bits (349), Expect = 2e-30
Identities = 74/97 (76%), Positives = 76/97 (78%)
Frame = -2
Query: 508 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILGXXXXXXXXXX 329
M +EEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLNMILG
Sbjct: 1 MAAEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVE 60
Query: 328 XXXXXXXXXVRTTRRTVPFLFVRGDGVILVSPPLRTA 218
VRTT+RTVPFLFVRGDGVILVSPPLRTA
Sbjct: 61 IDDETYEEIVRTTKRTVPFLFVRGDGVILVSPPLRTA 97
>ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycine max]
gi|255626487|gb|ACU13588.1| unknown [Glycine max]
Length = 97
Score = 139 bits (349), Expect = 2e-30
Identities = 74/97 (76%), Positives = 76/97 (78%)
Frame = -2
Query: 508 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILGXXXXXXXXXX 329
M +EEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLNMILG
Sbjct: 1 MATEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVE 60
Query: 328 XXXXXXXXXVRTTRRTVPFLFVRGDGVILVSPPLRTA 218
VRTT+RTVPFLFVRGDGVILVSPPLRTA
Sbjct: 61 IDDETYEEIVRTTKRTVPFLFVRGDGVILVSPPLRTA 97
>ref|XP_002532432.1| snrnp sm protein, putative [Ricinus communis]
gi|223527852|gb|EEF29947.1| snrnp sm protein, putative
[Ricinus communis] gi|561025339|gb|ESW24024.1|
hypothetical protein PHAVU_004G095700g [Phaseolus
vulgaris]
Length = 97
Score = 139 bits (349), Expect = 2e-30
Identities = 74/97 (76%), Positives = 76/97 (78%)
Frame = -2
Query: 508 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILGXXXXXXXXXX 329
M +EEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLNMILG
Sbjct: 1 MATEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEVVTTVE 60
Query: 328 XXXXXXXXXVRTTRRTVPFLFVRGDGVILVSPPLRTA 218
VRTT+RTVPFLFVRGDGVILVSPPLRTA
Sbjct: 61 IDDETYEEIVRTTKRTVPFLFVRGDGVILVSPPLRTA 97
>gb|EXC25394.1| hypothetical protein L484_016776 [Morus notabilis]
Length = 98
Score = 138 bits (347), Expect = 4e-30
Identities = 74/95 (77%), Positives = 75/95 (78%)
Frame = -2
Query: 502 SEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILGXXXXXXXXXXXX 323
+EEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLNMILG
Sbjct: 4 TEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEVVTTVEID 63
Query: 322 XXXXXXXVRTTRRTVPFLFVRGDGVILVSPPLRTA 218
VRTTRRTVPFLFVRGDGVILVSPPLRTA
Sbjct: 64 DETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRTA 98
>gb|EMJ01842.1| hypothetical protein PRUPE_ppa013901mg [Prunus persica]
Length = 97
Score = 138 bits (347), Expect = 4e-30
Identities = 74/97 (76%), Positives = 75/97 (77%)
Frame = -2
Query: 508 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILGXXXXXXXXXX 329
M SEEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLNMILG
Sbjct: 1 MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEVVTSIE 60
Query: 328 XXXXXXXXXVRTTRRTVPFLFVRGDGVILVSPPLRTA 218
VRTT+R VPFLFVRGDGVILVSPPLRTA
Sbjct: 61 IDDETYEEIVRTTKRNVPFLFVRGDGVILVSPPLRTA 97
>ref|XP_004249874.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like isoform 2
[Solanum lycopersicum] gi|565368784|ref|XP_006351021.1|
PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like
[Solanum tuberosum]
Length = 97
Score = 138 bits (347), Expect = 4e-30
Identities = 73/96 (76%), Positives = 74/96 (77%)
Frame = -2
Query: 508 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILGXXXXXXXXXX 329
MGSEEES VKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLNMILG
Sbjct: 1 MGSEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVE 60
Query: 328 XXXXXXXXXVRTTRRTVPFLFVRGDGVILVSPPLRT 221
VR TRRT+PFLFVRGDGVILVSPPLRT
Sbjct: 61 IDDETYEEIVRATRRTIPFLFVRGDGVILVSPPLRT 96
>ref|NP_001236557.1| uncharacterized protein LOC100306547 [Glycine max]
gi|255628849|gb|ACU14769.1| unknown [Glycine max]
Length = 97
Score = 137 bits (344), Expect = 8e-30
Identities = 73/97 (75%), Positives = 75/97 (77%)
Frame = -2
Query: 508 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILGXXXXXXXXXX 329
M +EEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLNMILG
Sbjct: 1 MSTEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIITTVE 60
Query: 328 XXXXXXXXXVRTTRRTVPFLFVRGDGVILVSPPLRTA 218
VRTT+RTVPFLFVRGDGVILVSPPLR A
Sbjct: 61 IDDETYEEIVRTTKRTVPFLFVRGDGVILVSPPLRAA 97
>gb|ESW24417.1| hypothetical protein PHAVU_004G129000g [Phaseolus vulgaris]
Length = 97
Score = 135 bits (341), Expect = 2e-29
Identities = 73/97 (75%), Positives = 75/97 (77%)
Frame = -2
Query: 508 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILGXXXXXXXXXX 329
M +EEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLNMILG
Sbjct: 1 MTTEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEVVTTVE 60
Query: 328 XXXXXXXXXVRTTRRTVPFLFVRGDGVILVSPPLRTA 218
VRTT+R VPFLFVRGDGVILVSPPLRTA
Sbjct: 61 IDDETYEEIVRTTKRMVPFLFVRGDGVILVSPPLRTA 97
>ref|XP_004160308.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Cucumis
sativus]
Length = 97
Score = 135 bits (340), Expect = 2e-29
Identities = 72/96 (75%), Positives = 74/96 (77%)
Frame = -2
Query: 508 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILGXXXXXXXXXX 329
M +EEES VKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLNMILG
Sbjct: 1 MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEESVTTVE 60
Query: 328 XXXXXXXXXVRTTRRTVPFLFVRGDGVILVSPPLRT 221
VRT+RRTVPFLFVRGDGVILVSPPLRT
Sbjct: 61 IDDETYEEIVRTSRRTVPFLFVRGDGVILVSPPLRT 96
>ref|XP_003564691.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like isoform 1
[Brachypodium distachyon]
Length = 98
Score = 135 bits (340), Expect = 2e-29
Identities = 72/95 (75%), Positives = 74/95 (77%)
Frame = -2
Query: 502 SEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILGXXXXXXXXXXXX 323
+EEE AVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLNMILG
Sbjct: 4 AEEEIAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEID 63
Query: 322 XXXXXXXVRTTRRTVPFLFVRGDGVILVSPPLRTA 218
VRTTRRT+PFLFVRGDGVILVSPPLRTA
Sbjct: 64 DETYEEIVRTTRRTIPFLFVRGDGVILVSPPLRTA 98
>ref|XP_001755214.1| predicted protein [Physcomitrella patens]
gi|162693807|gb|EDQ80158.1| predicted protein
[Physcomitrella patens]
Length = 97
Score = 135 bits (339), Expect = 3e-29
Identities = 71/97 (73%), Positives = 76/97 (78%)
Frame = -2
Query: 508 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILGXXXXXXXXXX 329
M +EE+SAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLNMILG
Sbjct: 1 MATEEDSAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGEVEEVTTSVE 60
Query: 328 XXXXXXXXXVRTTRRTVPFLFVRGDGVILVSPPLRTA 218
VRT+RRTVP+LFVRGDGVILVSPPLRT+
Sbjct: 61 IDDETYEEIVRTSRRTVPYLFVRGDGVILVSPPLRTS 97
>ref|XP_004970703.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Setaria
italica]
Length = 98
Score = 134 bits (337), Expect = 5e-29
Identities = 71/95 (74%), Positives = 74/95 (77%)
Frame = -2
Query: 502 SEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILGXXXXXXXXXXXX 323
+EEE AVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLNMILG
Sbjct: 4 AEEEIAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEVVTTVEID 63
Query: 322 XXXXXXXVRTTRRTVPFLFVRGDGVILVSPPLRTA 218
VRTT+RT+PFLFVRGDGVILVSPPLRTA
Sbjct: 64 DETYEEIVRTTKRTIPFLFVRGDGVILVSPPLRTA 98