BLASTX nr result

ID: Rehmannia25_contig00007752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00007752
         (564 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006350542.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...    60   4e-07
ref|XP_004240958.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...    58   2e-06
ref|XP_006360161.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...    57   3e-06
ref|XP_004234967.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...    56   5e-06

>ref|XP_006350542.1| PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Solanum
           tuberosum]
          Length = 314

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 32/45 (71%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
 Frame = +2

Query: 431 DGIEDEEIQTSVSSNPHQYSS-KRHNIVASGIAPTSVHELLECPV 562
           DGIEDEEIQ S   + HQ+SS K HNI+  G+APTSVHELLECPV
Sbjct: 13  DGIEDEEIQLS---HNHQFSSAKPHNILLPGLAPTSVHELLECPV 54


>ref|XP_004240958.1| PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Solanum
           lycopersicum]
          Length = 318

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
 Frame = +2

Query: 431 DGIEDEEIQTSVSSNPHQYS-SKRHNIVASGIAPTSVHELLECPV 562
           DG+EDEEIQ+S++S  HQY   K +NI+++G  PTSVHELLECPV
Sbjct: 16  DGVEDEEIQSSIAS--HQYPLGKPNNILSAGNVPTSVHELLECPV 58


>ref|XP_006360161.1| PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Solanum
           tuberosum]
          Length = 318

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/45 (66%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
 Frame = +2

Query: 431 DGIEDEEIQTSVSSNPHQYS-SKRHNIVASGIAPTSVHELLECPV 562
           DG+EDEEIQ+SV+S  HQY   K +NI+ +G  PTSVHELLECPV
Sbjct: 16  DGVEDEEIQSSVAS--HQYPLGKPNNILHAGNVPTSVHELLECPV 58


>ref|XP_004234967.1| PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Solanum
           lycopersicum]
          Length = 313

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 31/45 (68%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
 Frame = +2

Query: 431 DGIEDEEIQTSVSSNPHQYSS-KRHNIVASGIAPTSVHELLECPV 562
           DGIEDEEIQ S     +Q+SS K HNI+  G+APTSVHELLECPV
Sbjct: 13  DGIEDEEIQLS----HNQFSSAKPHNILFPGLAPTSVHELLECPV 53


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