BLASTX nr result

ID: Rehmannia25_contig00007615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00007615
         (1482 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006364447.1| PREDICTED: TATA-binding protein-associated f...   101   7e-19
ref|XP_006361692.1| PREDICTED: heterogeneous nuclear ribonucleop...    96   4e-17
ref|XP_002311989.2| hypothetical protein POPTR_0008s03290g [Popu...    96   4e-17
ref|XP_006605889.1| PREDICTED: glycine-rich RNA-binding protein ...    95   7e-17
ref|XP_006589703.1| PREDICTED: TATA-binding protein-associated f...    95   7e-17
ref|XP_006436516.1| hypothetical protein CICLE_v100325201mg [Cit...    95   7e-17
ref|XP_003555886.1| PREDICTED: glycine-rich RNA-binding protein ...    95   7e-17
ref|XP_003536695.1| PREDICTED: TATA-binding protein-associated f...    95   7e-17
gb|ACU23136.1| unknown [Glycine max]                                   95   7e-17
gb|EMJ19995.1| hypothetical protein PRUPE_ppa009799mg [Prunus pe...    95   9e-17
ref|XP_004250041.1| PREDICTED: uncharacterized protein LOC101265...    95   9e-17
ref|XP_002533374.1| glycine-rich RNA-binding protein, putative [...    95   9e-17
ref|XP_002315330.1| glycine-rich RNA-binding family protein [Pop...    94   1e-16
gb|EXB96179.1| Glycine-rich RNA-binding, abscisic acid-inducible...    94   1e-16
ref|XP_006485577.1| PREDICTED: glycine-rich RNA-binding protein ...    94   1e-16
gb|ESW14878.1| hypothetical protein PHAVU_007G025100g, partial [...    94   1e-16
emb|CBI31404.3| unnamed protein product [Vitis vinifera]               94   1e-16
ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleop...    94   1e-16
ref|XP_006436514.1| hypothetical protein CICLE_v100325201mg [Cit...    93   3e-16
emb|CAN66927.1| hypothetical protein VITISV_011831 [Vitis vinifera]    93   3e-16

>ref|XP_006364447.1| PREDICTED: TATA-binding protein-associated factor 2N-like isoform X2
            [Solanum tuberosum]
          Length = 266

 Score =  101 bits (252), Expect = 7e-19
 Identities = 48/60 (80%), Positives = 54/60 (90%)
 Frame = +2

Query: 1301 ICNSADSSPHVMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 1480
            IC +ADS+  VML+RDTGRPRGFGF+TFADRRAMEDAIR+M G E+GDR ISVNKAQPKM
Sbjct: 24   ICRTADSAAQVMLDRDTGRPRGFGFLTFADRRAMEDAIREMDGAEVGDRVISVNKAQPKM 83


>ref|XP_006361692.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Solanum
            tuberosum]
          Length = 331

 Score = 95.9 bits (237), Expect = 4e-17
 Identities = 44/50 (88%), Positives = 49/50 (98%)
 Frame = +2

Query: 1331 VMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 1480
            VMLERDTGRPRGFGF+TFADRR+MEDAIR+MHGRE+GD+ ISVNKAQPKM
Sbjct: 39   VMLERDTGRPRGFGFLTFADRRSMEDAIREMHGREIGDKVISVNKAQPKM 88


>ref|XP_002311989.2| hypothetical protein POPTR_0008s03290g [Populus trichocarpa]
            gi|550332329|gb|EEE89356.2| hypothetical protein
            POPTR_0008s03290g [Populus trichocarpa]
          Length = 279

 Score = 95.9 bits (237), Expect = 4e-17
 Identities = 44/50 (88%), Positives = 48/50 (96%)
 Frame = +2

Query: 1331 VMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 1480
            VMLERDTGRPRGFGF+TFADRRAM+DAIR+MHGR+ GDR ISVNKAQPKM
Sbjct: 38   VMLERDTGRPRGFGFITFADRRAMDDAIREMHGRDFGDRVISVNKAQPKM 87


>ref|XP_006605889.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
            isoform X2 [Glycine max]
          Length = 255

 Score = 95.1 bits (235), Expect = 7e-17
 Identities = 42/50 (84%), Positives = 48/50 (96%)
 Frame = +2

Query: 1331 VMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 1480
            +M+ERDTGRPRGFGF+TFADRR MEDAI++MHGRE+GDR ISVNKAQPKM
Sbjct: 14   IMMERDTGRPRGFGFITFADRRGMEDAIKEMHGREIGDRIISVNKAQPKM 63


>ref|XP_006589703.1| PREDICTED: TATA-binding protein-associated factor 2N-like isoform X2
            [Glycine max]
          Length = 289

 Score = 95.1 bits (235), Expect = 7e-17
 Identities = 42/50 (84%), Positives = 48/50 (96%)
 Frame = +2

Query: 1331 VMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 1480
            +M+ERDTGRPRGFGF+TFADRR MEDAI++MHGRE+GDR ISVNKAQPKM
Sbjct: 48   IMMERDTGRPRGFGFITFADRRGMEDAIKEMHGREIGDRIISVNKAQPKM 97


>ref|XP_006436516.1| hypothetical protein CICLE_v100325201mg [Citrus clementina]
            gi|568864382|ref|XP_006485578.1| PREDICTED: glycine-rich
            RNA-binding protein 10-like isoform X2 [Citrus sinensis]
            gi|557538712|gb|ESR49756.1| hypothetical protein
            CICLE_v100325201mg [Citrus clementina]
          Length = 255

 Score = 95.1 bits (235), Expect = 7e-17
 Identities = 43/59 (72%), Positives = 52/59 (88%)
 Frame = +2

Query: 1304 CNSADSSPHVMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 1480
            C + ++   +MLERD+GRPRGFGF+T+ADRRAM+DAIR+MHGRE GDR ISVNKAQPKM
Sbjct: 4    CLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM 62


>ref|XP_003555886.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
            isoform X1 [Glycine max]
          Length = 279

 Score = 95.1 bits (235), Expect = 7e-17
 Identities = 42/50 (84%), Positives = 48/50 (96%)
 Frame = +2

Query: 1331 VMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 1480
            +M+ERDTGRPRGFGF+TFADRR MEDAI++MHGRE+GDR ISVNKAQPKM
Sbjct: 38   IMMERDTGRPRGFGFITFADRRGMEDAIKEMHGREIGDRIISVNKAQPKM 87


>ref|XP_003536695.1| PREDICTED: TATA-binding protein-associated factor 2N-like isoform X1
            [Glycine max]
          Length = 279

 Score = 95.1 bits (235), Expect = 7e-17
 Identities = 42/50 (84%), Positives = 48/50 (96%)
 Frame = +2

Query: 1331 VMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 1480
            +M+ERDTGRPRGFGF+TFADRR MEDAI++MHGRE+GDR ISVNKAQPKM
Sbjct: 38   IMMERDTGRPRGFGFITFADRRGMEDAIKEMHGREIGDRIISVNKAQPKM 87


>gb|ACU23136.1| unknown [Glycine max]
          Length = 279

 Score = 95.1 bits (235), Expect = 7e-17
 Identities = 42/50 (84%), Positives = 48/50 (96%)
 Frame = +2

Query: 1331 VMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 1480
            +M+ERDTGRPRGFGF+TFADRR MEDAI++MHGRE+GDR ISVNKAQPKM
Sbjct: 38   IMMERDTGRPRGFGFITFADRRGMEDAIKEMHGREIGDRIISVNKAQPKM 87


>gb|EMJ19995.1| hypothetical protein PRUPE_ppa009799mg [Prunus persica]
          Length = 277

 Score = 94.7 bits (234), Expect = 9e-17
 Identities = 43/50 (86%), Positives = 47/50 (94%)
 Frame = +2

Query: 1331 VMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 1480
            +M+ERDT RPRGFGF+TF DRRAMEDAIR+MHGRELGDR ISVNKAQPKM
Sbjct: 38   IMMERDTNRPRGFGFITFGDRRAMEDAIREMHGRELGDRIISVNKAQPKM 87


>ref|XP_004250041.1| PREDICTED: uncharacterized protein LOC101265498 [Solanum
            lycopersicum]
          Length = 317

 Score = 94.7 bits (234), Expect = 9e-17
 Identities = 43/50 (86%), Positives = 49/50 (98%)
 Frame = +2

Query: 1331 VMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 1480
            VML+RDTGRPRGFGF+TFADRR+MEDAIR+MHGRE+GD+ ISVNKAQPKM
Sbjct: 39   VMLDRDTGRPRGFGFLTFADRRSMEDAIREMHGREIGDKVISVNKAQPKM 88


>ref|XP_002533374.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
            gi|223526781|gb|EEF29005.1| glycine-rich RNA-binding
            protein, putative [Ricinus communis]
          Length = 276

 Score = 94.7 bits (234), Expect = 9e-17
 Identities = 43/50 (86%), Positives = 48/50 (96%)
 Frame = +2

Query: 1331 VMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 1480
            VMLERDTGRPRGFGF+TF+DRR+M+DAIR+MHGRE GDR ISVNKAQPKM
Sbjct: 38   VMLERDTGRPRGFGFITFSDRRSMDDAIREMHGREFGDRVISVNKAQPKM 87


>ref|XP_002315330.1| glycine-rich RNA-binding family protein [Populus trichocarpa]
            gi|222864370|gb|EEF01501.1| glycine-rich RNA-binding
            family protein [Populus trichocarpa]
          Length = 280

 Score = 94.4 bits (233), Expect = 1e-16
 Identities = 43/50 (86%), Positives = 48/50 (96%)
 Frame = +2

Query: 1331 VMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 1480
            VMLERDTGRPRGFGF+TFADRRAM+DAIR+MHGR+ GDR ISVNKAQPK+
Sbjct: 38   VMLERDTGRPRGFGFITFADRRAMDDAIREMHGRDFGDRVISVNKAQPKI 87


>gb|EXB96179.1| Glycine-rich RNA-binding, abscisic acid-inducible protein [Morus
            notabilis]
          Length = 275

 Score = 94.0 bits (232), Expect = 1e-16
 Identities = 42/50 (84%), Positives = 46/50 (92%)
 Frame = +2

Query: 1331 VMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 1480
            +M+ERDTGRPRGFGF+TF DRR MEDAIR+MHGRE GDR ISVNKAQPKM
Sbjct: 38   IMMERDTGRPRGFGFITFGDRRGMEDAIREMHGREFGDRIISVNKAQPKM 87


>ref|XP_006485577.1| PREDICTED: glycine-rich RNA-binding protein 10-like isoform X1
            [Citrus sinensis]
          Length = 280

 Score = 94.0 bits (232), Expect = 1e-16
 Identities = 42/50 (84%), Positives = 48/50 (96%)
 Frame = +2

Query: 1331 VMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 1480
            +MLERD+GRPRGFGF+T+ADRRAM+DAIR+MHGRE GDR ISVNKAQPKM
Sbjct: 38   IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM 87


>gb|ESW14878.1| hypothetical protein PHAVU_007G025100g, partial [Phaseolus vulgaris]
          Length = 117

 Score = 94.0 bits (232), Expect = 1e-16
 Identities = 41/50 (82%), Positives = 48/50 (96%)
 Frame = +2

Query: 1331 VMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 1480
            +M+ERDTGRPRGFGF+TF+DRR MEDAI++MHGRE+GDR ISVNKAQPKM
Sbjct: 38   IMMERDTGRPRGFGFITFSDRRGMEDAIKEMHGREIGDRIISVNKAQPKM 87


>emb|CBI31404.3| unnamed protein product [Vitis vinifera]
          Length = 294

 Score = 94.0 bits (232), Expect = 1e-16
 Identities = 42/50 (84%), Positives = 47/50 (94%)
 Frame = +2

Query: 1331 VMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 1480
            +MLERDTGRPRGFGF+T+ADRR MEDAIR+MHGR+ GDR ISVNKAQPKM
Sbjct: 54   IMLERDTGRPRGFGFITYADRRGMEDAIREMHGRDFGDRIISVNKAQPKM 103


>ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Vitis vinifera]
          Length = 278

 Score = 94.0 bits (232), Expect = 1e-16
 Identities = 42/50 (84%), Positives = 47/50 (94%)
 Frame = +2

Query: 1331 VMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 1480
            +MLERDTGRPRGFGF+T+ADRR MEDAIR+MHGR+ GDR ISVNKAQPKM
Sbjct: 38   IMLERDTGRPRGFGFITYADRRGMEDAIREMHGRDFGDRIISVNKAQPKM 87


>ref|XP_006436514.1| hypothetical protein CICLE_v100325201mg [Citrus clementina]
            gi|567887986|ref|XP_006436515.1| hypothetical protein
            CICLE_v100325201mg [Citrus clementina]
            gi|557538710|gb|ESR49754.1| hypothetical protein
            CICLE_v100325201mg [Citrus clementina]
            gi|557538711|gb|ESR49755.1| hypothetical protein
            CICLE_v100325201mg [Citrus clementina]
          Length = 242

 Score = 92.8 bits (229), Expect = 3e-16
 Identities = 42/49 (85%), Positives = 47/49 (95%)
 Frame = +2

Query: 1334 MLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 1480
            MLERD+GRPRGFGF+T+ADRRAM+DAIR+MHGRE GDR ISVNKAQPKM
Sbjct: 1    MLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM 49


>emb|CAN66927.1| hypothetical protein VITISV_011831 [Vitis vinifera]
          Length = 240

 Score = 92.8 bits (229), Expect = 3e-16
 Identities = 42/49 (85%), Positives = 46/49 (93%)
 Frame = +2

Query: 1334 MLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 1480
            MLERDTGRPRGFGF+T+ADRR MEDAIR+MHGR+ GDR ISVNKAQPKM
Sbjct: 1    MLERDTGRPRGFGFITYADRRGMEDAIREMHGRDFGDRIISVNKAQPKM 49


Top