BLASTX nr result
ID: Rehmannia25_contig00007278
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00007278
(776 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI29694.3| unnamed protein product [Vitis vinifera] 193 5e-47
ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts... 193 6e-47
ref|XP_002526435.1| conserved hypothetical protein [Ricinus comm... 182 8e-44
ref|XP_003633401.1| PREDICTED: uncharacterized protein LOC100852... 182 1e-43
emb|CAN60293.1| hypothetical protein VITISV_023400 [Vitis vinifera] 182 1e-43
ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Popu... 181 2e-43
ref|XP_002328787.1| predicted protein [Populus trichocarpa] gi|5... 174 3e-41
ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts... 170 4e-40
ref|XP_006349314.1| PREDICTED: regulator of nonsense transcripts... 170 4e-40
ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Popu... 170 4e-40
ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citr... 169 7e-40
ref|XP_004230442.1| PREDICTED: uncharacterized protein LOC101264... 168 2e-39
ref|XP_006339925.1| PREDICTED: regulator of nonsense transcripts... 164 2e-38
gb|EOX97031.1| Smg-4/UPF3 family protein, putative isoform 1 [Th... 149 8e-34
ref|XP_004248850.1| PREDICTED: uncharacterized protein LOC101263... 147 4e-33
gb|EMJ23015.1| hypothetical protein PRUPE_ppa004923mg [Prunus pe... 143 7e-32
gb|EMJ23014.1| hypothetical protein PRUPE_ppa004923mg [Prunus pe... 137 5e-30
gb|ESW20566.1| hypothetical protein PHAVU_006G219800g [Phaseolus... 125 2e-26
ref|XP_006598794.1| PREDICTED: regulator of nonsense transcripts... 124 5e-26
ref|XP_004485448.1| PREDICTED: regulator of nonsense transcripts... 123 6e-26
>emb|CBI29694.3| unnamed protein product [Vitis vinifera]
Length = 519
Score = 193 bits (491), Expect = 5e-47
Identities = 113/263 (42%), Positives = 150/263 (57%), Gaps = 5/263 (1%)
Frame = +2
Query: 2 DALEGENGGSGPTXXXXXXXXXXXXXXXXXSNVSGGSSLQQNASNPAKNSHSSAPFRQNQ 181
+ALE E+G SG S+ LQQN ++P KN + +QNQ
Sbjct: 255 EALEEESGVSGAVDAGKKKVLLLKGKEREISH----HLLQQNVTSPVKNILGANAPKQNQ 310
Query: 182 RRETNGRIIRSILLNRDTRQNQPPLGSQSELRIQTSNQDRDKKPPRPPSMQSFQKETNGV 361
RRE +GRIIRSILLN+D RQ+Q + Q+E + Q SN +++K+PPRPP +Q KETNG
Sbjct: 311 RREGSGRIIRSILLNKDARQSQSSM-FQTEQQSQASNLEKEKRPPRPPHIQLASKETNGA 369
Query: 362 LEDKVVSNDLHAVHTEKQDRRTKNKDRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXXXX 541
+DKVV ND+H+ +EKQD+RT+NKDRPDRGVWTPLRR
Sbjct: 370 QDDKVVGNDVHSFVSEKQDKRTRNKDRPDRGVWTPLRRSDGSHASDESLSSSASQPTSSD 429
Query: 542 XXE----DVKNEMLVTRGGEHRHIGSGRNSHYSVEXXXXXXXXXXXXXXXIKDADVSSVV 709
E +++++M R GE + +GSGR H +++ +KDAD SS+V
Sbjct: 430 FPEGSHGEMRSDMSNARSGEVKALGSGRGGHSALDNGSHKHSGRRGPTHSVKDADGSSIV 489
Query: 710 -DGKPLKRGGGSGYGSHEKQVWV 775
+GK KRG GYGSHEKQVWV
Sbjct: 490 SEGKHSKRGSAPGYGSHEKQVWV 512
>ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Solanum tuberosum] gi|565345688|ref|XP_006339923.1|
PREDICTED: regulator of nonsense transcripts UPF3-like
isoform X2 [Solanum tuberosum]
gi|565345690|ref|XP_006339924.1| PREDICTED: regulator of
nonsense transcripts UPF3-like isoform X3 [Solanum
tuberosum]
Length = 508
Score = 193 bits (490), Expect = 6e-47
Identities = 115/263 (43%), Positives = 144/263 (54%), Gaps = 5/263 (1%)
Frame = +2
Query: 2 DALEGENGGSGPTXXXXXXXXXXXXXXXXXSNVSGGSSLQQNASNPAKNSHSSAPFRQNQ 181
D +EGE G S NVSGGS QQN S+ KNS S + +QNQ
Sbjct: 251 DVVEGEIGRSVTADSGKKKILLLKGKEKEGPNVSGGSLAQQNVSSALKNSPSLSALKQNQ 310
Query: 182 RRETNGRIIRSILLNRDTRQNQPPLGSQSELRIQTSNQDRDKKPPRPPSMQSFQKETNGV 361
R+E +GRIIRSILL +D RQNQ S QD+D +PPRPPSMQ FQK+T+G
Sbjct: 311 RQEASGRIIRSILL-KDARQNQSAFQSDQI-------QDKDMRPPRPPSMQLFQKDTSGA 362
Query: 362 LEDKVVSNDLHAVHTEKQDRRTKNKDRPDRGVWTPLRR-----XXXXXXXXXXXXXXXXX 526
EDKVV N+ H VH EKQ+RR++N+DRPDRGVW PLRR
Sbjct: 363 NEDKVVGNEKHVVHIEKQERRSRNRDRPDRGVWAPLRRADSSQASNGSLSSGIPQSSQVR 422
Query: 527 XXXXXXXEDVKNEMLVTRGGEHRHIGSGRNSHYSVEXXXXXXXXXXXXXXXIKDADVSSV 706
++KN++ + RG E R IGSGRNSH S + ++D +S+
Sbjct: 423 EFVEGGQGELKNDLPIARGTEFRPIGSGRNSHSSAD----NGNYKHGGRRGLRDVAGTSI 478
Query: 707 VDGKPLKRGGGSGYGSHEKQVWV 775
+GKP+K+GG S Y S EKQVWV
Sbjct: 479 GEGKPVKKGGTSAYSSLEKQVWV 501
>ref|XP_002526435.1| conserved hypothetical protein [Ricinus communis]
gi|223534215|gb|EEF35930.1| conserved hypothetical
protein [Ricinus communis]
Length = 472
Score = 182 bits (463), Expect = 8e-44
Identities = 110/233 (47%), Positives = 145/233 (62%), Gaps = 7/233 (3%)
Frame = +2
Query: 98 VSGGSSLQQNASNPAKNSHSSAPFRQNQRRETNGRIIRSILLNRDTRQNQPPLGSQSELR 277
+SGG S +QNA++ KN SSA +Q+QRRE++GRIIRSILLN+D+RQNQ G QSE +
Sbjct: 237 LSGGMS-KQNAASFDKNVTSSA-IKQSQRRESSGRIIRSILLNKDSRQNQSS-GFQSEQQ 293
Query: 278 IQTSNQDRDKKPPRPPSMQSFQKETNGVLEDKVVSNDLHAVHTEKQDRRTKNKDRPDRGV 457
IQ+SN +++K+ PRP +Q K+ NG +DK V NDLH EKQ++RT+NKDRPDR V
Sbjct: 294 IQSSNLEKEKRLPRPAHVQLVLKDVNGSSDDKFVGNDLHGFSGEKQEKRTRNKDRPDRVV 353
Query: 458 WTPLRRXXXXXXXXXXXXXXXXXXXXXXXXE------DVKNEMLVTRGGEHRHIGSGRNS 619
WTPLRR D+K + +R G+ + +GSGR+S
Sbjct: 354 WTPLRRSDGSYASDESLSSSASQSTHTGQDSSQGNLGDIKVDSSNSRSGDVKTLGSGRSS 413
Query: 620 HYSVEXXXXXXXXXXXXXXXIKDADVSSVVDGKPLKRGGG-SGYGSHEKQVWV 775
H S++ ++DAD SS ++GKP KRGGG SGYGSHEKQVWV
Sbjct: 414 HSSLDNGSHKHFGRRGPSHTVRDADGSS-LEGKPSKRGGGASGYGSHEKQVWV 465
>ref|XP_003633401.1| PREDICTED: uncharacterized protein LOC100852735 [Vitis vinifera]
Length = 322
Score = 182 bits (462), Expect = 1e-43
Identities = 108/258 (41%), Positives = 145/258 (56%), Gaps = 5/258 (1%)
Frame = +2
Query: 2 DALEGENGGSGPTXXXXXXXXXXXXXXXXXSNVSGGSSLQQNASNPAKNSHSSAPFRQNQ 181
+ALE E+G SG S+ LQQN ++P KN + +QNQ
Sbjct: 44 EALEEESGVSGAVDAGKKKVLLLKGKEREISH----HLLQQNVTSPVKNILGANAPKQNQ 99
Query: 182 RRETNGRIIRSILLNRDTRQNQPPLGSQSELRIQTSNQDRDKKPPRPPSMQSFQKETNGV 361
RRE +GRIIRSILLN+D RQ+Q + Q+E + Q SN +++K+PPRPP +Q KETNG
Sbjct: 100 RREGSGRIIRSILLNKDARQSQSSM-FQTEQQSQASNLEKEKRPPRPPHIQLASKETNGA 158
Query: 362 LEDKVVSNDLHAVHTEKQDRRTKNKDRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXXXX 541
+DKVV ND+H+ +EKQD+RT+NKDRPDRGVWTPLRR
Sbjct: 159 QDDKVVGNDVHSFVSEKQDKRTRNKDRPDRGVWTPLRRSDGSHASDESLSSSASQPTSSD 218
Query: 542 XXE----DVKNEMLVTRGGEHRHIGSGRNSHYSVEXXXXXXXXXXXXXXXIKDADVSSVV 709
E +++++M R GE + +GSGR H +++ +KDAD SS+V
Sbjct: 219 FPEGSHGEMRSDMSNARSGEVKALGSGRGGHSALDNGSHKHSGRRGPTHSVKDADGSSIV 278
Query: 710 -DGKPLKRGGGSGYGSHE 760
+GK KRG GYGSHE
Sbjct: 279 SEGKHSKRGSAPGYGSHE 296
>emb|CAN60293.1| hypothetical protein VITISV_023400 [Vitis vinifera]
Length = 304
Score = 182 bits (462), Expect = 1e-43
Identities = 100/221 (45%), Positives = 135/221 (61%), Gaps = 5/221 (2%)
Frame = +2
Query: 116 LQQNASNPAKNSHSSAPFRQNQRRETNGRIIRSILLNRDTRQNQPPLGSQSELRIQTSNQ 295
LQQN ++P KN + +QNQRRE +GRIIRSILLN+D RQ+Q + Q+E + Q SN
Sbjct: 34 LQQNVTSPVKNILGANAPKQNQRREGSGRIIRSILLNKDARQSQSSM-FQTEQQSQASNL 92
Query: 296 DRDKKPPRPPSMQSFQKETNGVLEDKVVSNDLHAVHTEKQDRRTKNKDRPDRGVWTPLRR 475
+++K+PPRPP +Q KETNG +DKVV ND+H+ +EKQD+RT+NKDRPDRGVWTPLRR
Sbjct: 93 EKEKRPPRPPHIQLASKETNGAQDDKVVGNDVHSFVSEKQDKRTRNKDRPDRGVWTPLRR 152
Query: 476 XXXXXXXXXXXXXXXXXXXXXXXXE----DVKNEMLVTRGGEHRHIGSGRNSHYSVEXXX 643
E +++++M R GE + +GSGR H +++
Sbjct: 153 SDGSHASDESLSSSASQPTSSDFPEGSHGEMRSDMSNARSGEVKALGSGRGGHSALDNGS 212
Query: 644 XXXXXXXXXXXXIKDADVSSVV-DGKPLKRGGGSGYGSHEK 763
+KDAD SS+V +GK KRG GYGSHE+
Sbjct: 213 HKHSGRRGPTHSVKDADGSSIVSEGKHSKRGSAPGYGSHEE 253
>ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Populus trichocarpa]
gi|550341819|gb|ERP62848.1| hypothetical protein
POPTR_0004s23450g [Populus trichocarpa]
Length = 520
Score = 181 bits (459), Expect = 2e-43
Identities = 112/262 (42%), Positives = 144/262 (54%), Gaps = 6/262 (2%)
Frame = +2
Query: 8 LEGENGGSGPTXXXXXXXXXXXXXXXXXSNVSGGSSLQQNASNPAKNSHSSAPFRQNQRR 187
LE E+ SG T S V+G S QQ+ S+ +N SS + +QRR
Sbjct: 256 LEDESVVSGITDSGKKKILLLKGKEKEISLVTGTMSQQQSISSSDRNIISSTALK-SQRR 314
Query: 188 ETNGRIIRSILLNRDTRQNQPPLGSQSELRIQTSNQDRDKKPPRPPSMQSFQKETNGVLE 367
ET+GR+IRSILLN+D+R + G SE ++QTSN +++K+PPRPP Q K+ NG +
Sbjct: 315 ETSGRMIRSILLNKDSRHIRSS-GVHSEPQMQTSNLEKEKRPPRPPHAQLGLKDANGTPD 373
Query: 368 DKVVSNDLHAVHTEKQDRRTKNKDRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXXXXXX 547
DKVV NDLH EKQ++RT+NKDRPDRGVWTPLRR
Sbjct: 374 DKVVGNDLHGFPNEKQEKRTRNKDRPDRGVWTPLRRSDGSYASDESLLSSASQSTQSVFD 433
Query: 548 E------DVKNEMLVTRGGEHRHIGSGRNSHYSVEXXXXXXXXXXXXXXXIKDADVSSVV 709
DVK + L R GE + +GSGR +H S++ ++DAD S V
Sbjct: 434 SSQGNHGDVKVDSLNLRSGEVKVLGSGRGNHSSLDNGSHKHFGRRGPSHIVRDAD-GSTV 492
Query: 710 DGKPLKRGGGSGYGSHEKQVWV 775
+ K KRGG SGYGSHEKQVWV
Sbjct: 493 EAKTPKRGGSSGYGSHEKQVWV 514
>ref|XP_002328787.1| predicted protein [Populus trichocarpa]
gi|566168252|ref|XP_006385052.1| Smg-4/UPF3 family
protein [Populus trichocarpa] gi|550341820|gb|ERP62849.1|
Smg-4/UPF3 family protein [Populus trichocarpa]
Length = 527
Score = 174 bits (441), Expect = 3e-41
Identities = 112/269 (41%), Positives = 144/269 (53%), Gaps = 13/269 (4%)
Frame = +2
Query: 8 LEGENGGSGPTXXXXXXXXXXXXXXXXXSNVSGGSSLQQNASNPAKNSHSSAPFRQNQRR 187
LE E+ SG T S V+G S QQ+ S+ +N SS + +QRR
Sbjct: 256 LEDESVVSGITDSGKKKILLLKGKEKEISLVTGTMSQQQSISSSDRNIISSTALK-SQRR 314
Query: 188 ETNGRIIRSILLNRDTRQNQPPLGSQSELRIQTSNQDRDKKPPRPPSMQSFQKETNGVLE 367
ET+GR+IRSILLN+D+R + G SE ++QTSN +++K+PPRPP Q K+ NG +
Sbjct: 315 ETSGRMIRSILLNKDSRHIRSS-GVHSEPQMQTSNLEKEKRPPRPPHAQLGLKDANGTPD 373
Query: 368 DKVVSNDLHAVHTEKQDRRTKNKDRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXXXXXX 547
DKVV NDLH EKQ++RT+NKDRPDRGVWTPLRR
Sbjct: 374 DKVVGNDLHGFPNEKQEKRTRNKDRPDRGVWTPLRRSDGSYASDESLLSSASQSTQSVFD 433
Query: 548 E------DVKNEMLVTRGGEHRHIGSGRNSHYSVEXXXXXXXXXXXXXXXIKDADVSSVV 709
DVK + L R GE + +GSGR +H S++ ++DAD S V
Sbjct: 434 SSQGNHGDVKVDSLNLRSGEVKVLGSGRGNHSSLDNGSHKHFGRRGPSHIVRDAD-GSTV 492
Query: 710 DGKPLKRGGGSGYGSHE-------KQVWV 775
+ K KRGG SGYGSHE KQVWV
Sbjct: 493 EAKTPKRGGSSGYGSHEVCSLDSQKQVWV 521
>ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Citrus
sinensis]
Length = 514
Score = 170 bits (431), Expect = 4e-40
Identities = 108/234 (46%), Positives = 133/234 (56%), Gaps = 6/234 (2%)
Frame = +2
Query: 92 SNVSGGSSLQQNASNPAKNSHSSAPFRQNQRRETNGRIIRSILLNRDTRQNQPPLGSQSE 271
S VSG S QQ+AS KN SS +QNQRRE +GRIIR ILLN+D RQNQ G SE
Sbjct: 284 SQVSGSVSHQQSAS--VKNIISSPALKQNQRRENSGRIIRGILLNKDARQNQAS-GLHSE 340
Query: 272 LRIQTSNQDRDKKPPRPPSMQSFQKETNGVLEDKVVSNDLHAVHTEKQDRRTKNKDRPDR 451
+I SN ++DK+PPRP + K+TNGV +DKV+ NDL H+EKQ+RRT+NKDRPDR
Sbjct: 341 QQI--SNLEKDKRPPRPSHVHLVMKDTNGVSDDKVIVNDL---HSEKQERRTRNKDRPDR 395
Query: 452 GVWTPLRRXXXXXXXXXXXXXXXXXXXXXXXXE------DVKNEMLVTRGGEHRHIGSGR 613
WT LRR D K ++ R GE + +G GR
Sbjct: 396 AAWT-LRRSDGSYQSDESLSSSASQLSLSAVDSSEGNLGDGKFDLSNMRSGEVKAVGGGR 454
Query: 614 NSHYSVEXXXXXXXXXXXXXXXIKDADVSSVVDGKPLKRGGGSGYGSHEKQVWV 775
+SH SV+ +KD + +GKPL+RGG SGYGSHEKQVWV
Sbjct: 455 SSHSSVD-NGSHRHIGRRGPTHVKDDSSPVMSEGKPLRRGGASGYGSHEKQVWV 507
>ref|XP_006349314.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Solanum
tuberosum]
Length = 483
Score = 170 bits (431), Expect = 4e-40
Identities = 100/205 (48%), Positives = 122/205 (59%), Gaps = 5/205 (2%)
Frame = +2
Query: 176 NQRRETNGRIIRSILLNRDTRQNQPPLGSQSELRIQTSNQDRDKKPPRPPSMQSFQKETN 355
NQRRE +GRIIRSILL +D RQNQ P SQ + D+DKKPPRPPS+Q FQ+ETN
Sbjct: 282 NQRREASGRIIRSILL-KDARQNQAPSASQQDKH----RVDKDKKPPRPPSVQLFQRETN 336
Query: 356 GVLEDKVVSNDLHAVHTEKQDRRTKNKDRPDRGVWTPLRR-----XXXXXXXXXXXXXXX 520
G EDKV+ DLH VHTEKQ++RT+ +DRPDRGVWTPLRR
Sbjct: 337 GANEDKVLGADLHIVHTEKQEKRTRIRDRPDRGVWTPLRRSDSLHASDESLSSSASQSSE 396
Query: 521 XXXXXXXXXEDVKNEMLVTRGGEHRHIGSGRNSHYSVEXXXXXXXXXXXXXXXIKDADVS 700
+ K+ + RG E R +GSGRNS+ S + ++D D
Sbjct: 397 VPDFVEGSQGETKHGLANARGAEFRPMGSGRNSYSSFD----NGTYKHGGRRGMRD-DGI 451
Query: 701 SVVDGKPLKRGGGSGYGSHEKQVWV 775
SV +GKPL+RGG S YG+HEKQVWV
Sbjct: 452 SVGEGKPLRRGGPSSYGTHEKQVWV 476
>ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Populus trichocarpa]
gi|550312328|gb|ERP48419.1| hypothetical protein
POPTR_0022s00460g [Populus trichocarpa]
Length = 511
Score = 170 bits (431), Expect = 4e-40
Identities = 104/227 (45%), Positives = 134/227 (59%), Gaps = 6/227 (2%)
Frame = +2
Query: 113 SLQQNASNPAKNSHSSAPFRQNQRRETNGRIIRSILLNRDTRQNQPPLGSQSELRIQTSN 292
SLQQ+ S +N SS + +QR E++GR+I+SILLN+D+R+ Q G QSE ++QTSN
Sbjct: 283 SLQQSISPSDRNIISSTALK-SQRHESSGRVIKSILLNKDSRRIQSS-GVQSEPQMQTSN 340
Query: 293 QDRDKKPPRPPSMQSFQKETNGVLEDKVVSNDLHAVHTEKQDRRTKNKDRPDRGVWTPLR 472
++DK+PPRPP K+ NG +DKVV NDLH EKQ+RRT+NKDRPDR VWT LR
Sbjct: 341 LEKDKRPPRPPHALVL-KDANGTPDDKVVGNDLHGFPNEKQERRTRNKDRPDRVVWT-LR 398
Query: 473 RXXXXXXXXXXXXXXXXXXXXXXXXE------DVKNEMLVTRGGEHRHIGSGRNSHYSVE 634
R DVK + L R GE + +GSGR++H S++
Sbjct: 399 RSEGSYASDESLSSSAYLSTQSGFDSSQVNHGDVKADTLNLRSGEVKALGSGRSNHSSLD 458
Query: 635 XXXXXXXXXXXXXXXIKDADVSSVVDGKPLKRGGGSGYGSHEKQVWV 775
++DAD S V+GK LKRGG SGYGSHEKQVWV
Sbjct: 459 NGSHKHSGRRGPPHPVRDAD-GSTVEGKSLKRGGASGYGSHEKQVWV 504
>ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citrus clementina]
gi|557533707|gb|ESR44825.1| hypothetical protein
CICLE_v10000901mg [Citrus clementina]
Length = 514
Score = 169 bits (429), Expect = 7e-40
Identities = 108/234 (46%), Positives = 133/234 (56%), Gaps = 6/234 (2%)
Frame = +2
Query: 92 SNVSGGSSLQQNASNPAKNSHSSAPFRQNQRRETNGRIIRSILLNRDTRQNQPPLGSQSE 271
S VSG S QQ+AS K SS +QNQRRE +GRIIR ILLN+D RQNQ G SE
Sbjct: 284 SQVSGSVSHQQSAS--VKTIISSPALKQNQRRENSGRIIRGILLNKDARQNQAS-GLHSE 340
Query: 272 LRIQTSNQDRDKKPPRPPSMQSFQKETNGVLEDKVVSNDLHAVHTEKQDRRTKNKDRPDR 451
+I SN ++DK+PPRP +Q K+TNGV +DKV+ NDL H+EKQ+RRT+NKDRPDR
Sbjct: 341 QQI--SNLEKDKRPPRPSHVQLVMKDTNGVSDDKVIVNDL---HSEKQERRTRNKDRPDR 395
Query: 452 GVWTPLRRXXXXXXXXXXXXXXXXXXXXXXXXE------DVKNEMLVTRGGEHRHIGSGR 613
WT LRR D K ++ R GE + +G GR
Sbjct: 396 AAWT-LRRSDGSYQSDESLSSSASQLSLSAVDSSEGNLGDGKFDLSNMRSGEVKAVGGGR 454
Query: 614 NSHYSVEXXXXXXXXXXXXXXXIKDADVSSVVDGKPLKRGGGSGYGSHEKQVWV 775
+SH SV+ +KD + +GKPL+RGG SGYGSHEKQVWV
Sbjct: 455 SSHSSVD-NGSHRHIGRRGPTHVKDDGSPVMSEGKPLRRGGASGYGSHEKQVWV 507
>ref|XP_004230442.1| PREDICTED: uncharacterized protein LOC101264766 [Solanum
lycopersicum]
Length = 485
Score = 168 bits (425), Expect = 2e-39
Identities = 99/205 (48%), Positives = 121/205 (59%), Gaps = 5/205 (2%)
Frame = +2
Query: 176 NQRRETNGRIIRSILLNRDTRQNQPPLGSQSELRIQTSNQDRDKKPPRPPSMQSFQKETN 355
NQRRE +GRIIRSILL +D RQNQ P SQ E D+DKKPPRPPS+Q FQ+ETN
Sbjct: 284 NQRREASGRIIRSILL-KDARQNQAPSASQQEKH----RVDKDKKPPRPPSVQLFQRETN 338
Query: 356 GVLEDKVVSNDLHAVHTEKQDRRTKNKDRPDRGVWTPLRR-----XXXXXXXXXXXXXXX 520
G ED+V+ DLH VHTEKQ++RT+ +DRPDRGVWTPLRR
Sbjct: 339 GANEDRVLGADLHVVHTEKQEKRTRIRDRPDRGVWTPLRRSDSLHASDESLSSSASQSSE 398
Query: 521 XXXXXXXXXEDVKNEMLVTRGGEHRHIGSGRNSHYSVEXXXXXXXXXXXXXXXIKDADVS 700
+ K+ ++ R E R +GSGRNSH S + ++D D
Sbjct: 399 VPDFVEGSPGETKHGLVNARVAEFRPMGSGRNSHSSFD----NGTYKHGGRRGMRD-DGI 453
Query: 701 SVVDGKPLKRGGGSGYGSHEKQVWV 775
SV +GKPL+RGG S Y +HEKQVWV
Sbjct: 454 SVGEGKPLRRGGPSSYNTHEKQVWV 478
>ref|XP_006339925.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X4
[Solanum tuberosum]
Length = 482
Score = 164 bits (416), Expect = 2e-38
Identities = 94/205 (45%), Positives = 119/205 (58%), Gaps = 5/205 (2%)
Frame = +2
Query: 176 NQRRETNGRIIRSILLNRDTRQNQPPLGSQSELRIQTSNQDRDKKPPRPPSMQSFQKETN 355
NQR+E +GRIIRSILL +D RQNQ S QD+D +PPRPPSMQ FQK+T+
Sbjct: 283 NQRQEASGRIIRSILL-KDARQNQSAFQSDQI-------QDKDMRPPRPPSMQLFQKDTS 334
Query: 356 GVLEDKVVSNDLHAVHTEKQDRRTKNKDRPDRGVWTPLRR-----XXXXXXXXXXXXXXX 520
G EDKVV N+ H VH EKQ+RR++N+DRPDRGVW PLRR
Sbjct: 335 GANEDKVVGNEKHVVHIEKQERRSRNRDRPDRGVWAPLRRADSSQASNGSLSSGIPQSSQ 394
Query: 521 XXXXXXXXXEDVKNEMLVTRGGEHRHIGSGRNSHYSVEXXXXXXXXXXXXXXXIKDADVS 700
++KN++ + RG E R IGSGRNSH S + ++D +
Sbjct: 395 VREFVEGGQGELKNDLPIARGTEFRPIGSGRNSHSSAD----NGNYKHGGRRGLRDVAGT 450
Query: 701 SVVDGKPLKRGGGSGYGSHEKQVWV 775
S+ +GKP+K+GG S Y S EKQVWV
Sbjct: 451 SIGEGKPVKKGGTSAYSSLEKQVWV 475
>gb|EOX97031.1| Smg-4/UPF3 family protein, putative isoform 1 [Theobroma cacao]
Length = 514
Score = 149 bits (377), Expect = 8e-34
Identities = 107/262 (40%), Positives = 134/262 (51%), Gaps = 7/262 (2%)
Frame = +2
Query: 11 EGENGGSGPTXXXXXXXXXXXXXXXXXSNVSGGSSLQQNASNPAKNSHSSAPFRQNQRRE 190
E E+G G T S V+G QQN ++P K S P +QN RRE
Sbjct: 258 EEESGVPGITDAVKKKVLLLKGKEKEISPVAGNVLHQQNVTSPIKTILGSTPTKQNSRRE 317
Query: 191 TNGRIIRSILLNRDTRQNQPPLGSQSELRIQTSNQDRDKKPPRPPSMQSFQKETNGVLED 370
GR+IR ILLN+D RQNQ G QSE +I+TSN ++D++PPR K+TN +D
Sbjct: 318 --GRMIRGILLNKDARQNQSS-GVQSEQQIRTSNLEKDRRPPRHSHSHLVLKDTNTASDD 374
Query: 371 KVVSNDLHAVHTEKQDRRTKNKDRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXXXXXXE 550
KVV NDLH +EK +RR +NKDRPDRGVWT LRR
Sbjct: 375 KVVGNDLHG--SEKPERRCRNKDRPDRGVWT-LRRSDGSYASDESMSSSASQSALIPLDP 431
Query: 551 ------DVKNEMLVTRGGEHRHIGSGRNSHYSVEXXXXXXXXXXXXXXXIKDADVSSVV- 709
D K ++ R + + +GSGRNS S++ AD SSV+
Sbjct: 432 LEGTYGDTKVDLSNVRSVQVKTVGSGRNS--SLDNGSHNKHVSRRGAV----ADGSSVMS 485
Query: 710 DGKPLKRGGGSGYGSHEKQVWV 775
DGKP KRG +GYGSHEKQVWV
Sbjct: 486 DGKPGKRGCAAGYGSHEKQVWV 507
>ref|XP_004248850.1| PREDICTED: uncharacterized protein LOC101263168 [Solanum
lycopersicum]
Length = 438
Score = 147 bits (371), Expect = 4e-33
Identities = 81/158 (51%), Positives = 97/158 (61%)
Frame = +2
Query: 2 DALEGENGGSGPTXXXXXXXXXXXXXXXXXSNVSGGSSLQQNASNPAKNSHSSAPFRQNQ 181
D +EGE G S + NVSGGS QQN S+ KNS S + + NQ
Sbjct: 251 DVVEGEIGRSVTSDSGKKKILLLKGKEKESPNVSGGSLAQQNVSSALKNSPSLSALKLNQ 310
Query: 182 RRETNGRIIRSILLNRDTRQNQPPLGSQSELRIQTSNQDRDKKPPRPPSMQSFQKETNGV 361
+E GRIIRSILL +D RQNQ S QD+D +PPRPPSMQ FQK+T+G
Sbjct: 311 HQEVGGRIIRSILL-KDARQNQSAFQSDQI-------QDKDMRPPRPPSMQLFQKDTSGA 362
Query: 362 LEDKVVSNDLHAVHTEKQDRRTKNKDRPDRGVWTPLRR 475
EDKVV N+ H VH EKQ+RR++N+DRPDRGVW PLRR
Sbjct: 363 NEDKVVGNEKHVVHIEKQERRSRNRDRPDRGVWAPLRR 400
>gb|EMJ23015.1| hypothetical protein PRUPE_ppa004923mg [Prunus persica]
Length = 485
Score = 143 bits (360), Expect = 7e-32
Identities = 89/223 (39%), Positives = 117/223 (52%), Gaps = 1/223 (0%)
Frame = +2
Query: 110 SSLQQNASNPAKNSHSSAPFRQNQRRETNGRIIRSILLNRDTRQNQPPLGSQSELRIQTS 289
+++ Q S+ AKN + +QN RR+ NGRIIR ILLN+D RQ+Q G S +IQTS
Sbjct: 289 ANMSQQQSSSAKNMGGTIALKQNLRRQENGRIIRGILLNKDARQSQSS-GIYSAQQIQTS 347
Query: 290 NQDRDKKPPRPPSMQSFQKETNGVLEDKVVSNDLHAVHTEKQDRRTKNKDRPDRGVWTPL 469
N DRDK+PPR +Q K+TNG + +V NDLH + +EKQ++R +NK+RPDR VWTPL
Sbjct: 348 NSDRDKRPPRSQHVQLILKDTNGAPDYNIVGNDLHGICSEKQEKRIRNKERPDRVVWTPL 407
Query: 470 RRXXXXXXXXXXXXXXXXXXXXXXXXEDVKNEMLVTRGGEHRHIGSGRNSHYSVEXXXXX 649
R + +L + G H+H G +H
Sbjct: 408 NRLDGSSASDESLSSAF----------QPAHSLLDSSEGCHKHHGRRGTTH--------- 448
Query: 650 XXXXXXXXXXIKDADVSSVV-DGKPLKRGGGSGYGSHEKQVWV 775
+KD D S V +GK KR GYGSHEKQVWV
Sbjct: 449 ---------GVKDLDGSPVAGEGKHSKR----GYGSHEKQVWV 478
>gb|EMJ23014.1| hypothetical protein PRUPE_ppa004923mg [Prunus persica]
Length = 482
Score = 137 bits (344), Expect = 5e-30
Identities = 86/223 (38%), Positives = 115/223 (51%), Gaps = 1/223 (0%)
Frame = +2
Query: 110 SSLQQNASNPAKNSHSSAPFRQNQRRETNGRIIRSILLNRDTRQNQPPLGSQSELRIQTS 289
+++ Q S+ AKN + +QN RR+ NGRIIR ILLN+D RQ+Q G S +IQTS
Sbjct: 289 ANMSQQQSSSAKNMGGTIALKQNLRRQENGRIIRGILLNKDARQSQSS-GIYSAQQIQTS 347
Query: 290 NQDRDKKPPRPPSMQSFQKETNGVLEDKVVSNDLHAVHTEKQDRRTKNKDRPDRGVWTPL 469
N DRDK+PPR +Q K+TNG + +V NDLH + +EKQ++R +NK+RPDR VWTPL
Sbjct: 348 NSDRDKRPPRSQHVQLILKDTNGAPDYNIVGNDLHGICSEKQEKRIRNKERPDRVVWTPL 407
Query: 470 RRXXXXXXXXXXXXXXXXXXXXXXXXEDVKNEMLVTRGGEHRHIGSGRNSHYSVEXXXXX 649
R + +L + G H+H G +H
Sbjct: 408 NRLDGSSASDESLSSAF----------QPAHSLLDSSEGCHKHHGRRGTTH--------- 448
Query: 650 XXXXXXXXXXIKDADVSSVV-DGKPLKRGGGSGYGSHEKQVWV 775
+KD D S V +GK KR GYGSHE VW+
Sbjct: 449 ---------GVKDLDGSPVAGEGKHSKR----GYGSHECDVWL 478
>gb|ESW20566.1| hypothetical protein PHAVU_006G219800g [Phaseolus vulgaris]
gi|561021796|gb|ESW20567.1| hypothetical protein
PHAVU_006G219800g [Phaseolus vulgaris]
Length = 513
Score = 125 bits (313), Expect = 2e-26
Identities = 92/256 (35%), Positives = 126/256 (49%), Gaps = 3/256 (1%)
Frame = +2
Query: 17 ENGGSGPTXXXXXXXXXXXXXXXXXSNVSGGSSLQQ--NASNPAKNSHSSAPFRQNQRRE 190
ENG SG + VS S+ Q N + AK + +QNQR+E
Sbjct: 257 ENGFSGNSDSGKKKILLLKGKEREIIAVSDLDSMSQHHNVISSAKEIVGATVLKQNQRQE 316
Query: 191 TNGRIIRSILLNRDTRQNQPPLGSQSELRIQTSNQDRDKKPPRPPSMQSFQKETNGVLED 370
+GRIIRSIL ++ RQ+Q + SE +IQTSN ++DK+ PRP +Q K NG ++
Sbjct: 317 GSGRIIRSILSKKELRQSQSS-RALSEQQIQTSNLEKDKQSPRPIQVQLILKGMNGTPDN 375
Query: 371 KVVSNDLHAVHTEKQDRRTKNKDRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXXXXXXE 550
K+ D H V +E+Q+R ++KDRPDRGVWT
Sbjct: 376 KIGVLDSH-VFSERQERHIRHKDRPDRGVWTSCSN---GADESFPSAAFSQVDPLEGSHA 431
Query: 551 DVKNEMLVTRGGEHRHIGSGRNSHYSVEXXXXXXXXXXXXXXXIKDADVSSV-VDGKPLK 727
D+K++M TR GE + +G R SH S E +KD D SV +GK +
Sbjct: 432 DLKHDMPNTRSGEVKSLGGVRTSH-SSENGFNKHFGRRGPTHGVKDVDGYSVSSEGKHPR 490
Query: 728 RGGGSGYGSHEKQVWV 775
R G + YGS+EKQVWV
Sbjct: 491 RSGTTAYGSNEKQVWV 506
>ref|XP_006598794.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Glycine max] gi|571524272|ref|XP_006598795.1|
PREDICTED: regulator of nonsense transcripts UPF3-like
isoform X2 [Glycine max]
Length = 512
Score = 124 bits (310), Expect = 5e-26
Identities = 84/222 (37%), Positives = 117/222 (52%), Gaps = 1/222 (0%)
Frame = +2
Query: 113 SLQQNASNPAKNSHSSAPFRQNQRRETNGRIIRSILLNRDTRQNQPPLGSQSELRIQTSN 292
S N ++ AK S +Q+QR E +GRIIRSIL ++ RQ+Q + SE +IQTSN
Sbjct: 290 SQHHNVTSSAKMIVGSTVLKQSQRHEGSGRIIRSILSKKELRQSQYSR-ALSEQQIQTSN 348
Query: 293 QDRDKKPPRPPSMQSFQKETNGVLEDKVVSNDLHAVHTEKQDRRTKNKDRPDRGVWTPLR 472
+++K+PPRP +Q K +NG E+K+ +D H V +E+Q+R ++KDRPDRGVWT
Sbjct: 349 LEKEKQPPRPLHVQLILKGSNGTPENKIGVHDSH-VSSERQERHVRHKDRPDRGVWT--- 404
Query: 473 RXXXXXXXXXXXXXXXXXXXXXXXXEDVKNEMLVTRGGEHRHIGSGRNSHYSVEXXXXXX 652
D+K++ R GE + +GS R SH S E
Sbjct: 405 SRSNGADDSFSSSASSQVDPLEGSHADLKHDTPNARSGEVKSLGSVRTSH-SSENGFNKH 463
Query: 653 XXXXXXXXXIKDADVSSV-VDGKPLKRGGGSGYGSHEKQVWV 775
+KD D SV +GK +R S YGS+EKQVWV
Sbjct: 464 FGRRGPSHGVKDVDGYSVSSEGKHPRRSSTSAYGSNEKQVWV 505
>ref|XP_004485448.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
[Cicer arietinum] gi|502076758|ref|XP_004485449.1|
PREDICTED: regulator of nonsense transcripts UPF3-like
isoform X3 [Cicer arietinum]
gi|502076762|ref|XP_004485450.1| PREDICTED: regulator of
nonsense transcripts UPF3-like isoform X4 [Cicer
arietinum]
Length = 510
Score = 123 bits (309), Expect = 6e-26
Identities = 82/226 (36%), Positives = 118/226 (52%), Gaps = 1/226 (0%)
Frame = +2
Query: 101 SGGSSLQQNASNPAKNSHSSAPFRQNQRRETNGRIIRSILLNRDTRQNQPPLGSQSELRI 280
S S + ++ AK +S +QNQR E +GRII+SIL N+D RQNQ + SE ++
Sbjct: 284 SDSMSQHHSITSSAKTILNSTALKQNQRHEGSGRIIKSILSNKDLRQNQSS-RAYSERQL 342
Query: 281 QTSNQDRDKKPPRPPSMQSFQKETNGVLEDKVVSNDLHAVHTEKQDRRTKNKDRPDRGVW 460
QTSN +++K+P RP +Q K T+G E+++ + LH V +E+Q+RR + KDRPDRG+W
Sbjct: 343 QTSNLEKEKQPTRPLHVQLILKGTDGAPENRITVHGLH-VSSERQERRFRQKDRPDRGIW 401
Query: 461 TPLRRXXXXXXXXXXXXXXXXXXXXXXXXEDVKNEMLVTRGGEHRHIGSGRNSHYSVEXX 640
T ++K++ R GE + GS R SH S E
Sbjct: 402 T---SRSNGGDESLSSSASSQVDPLEGGHAELKHDTRSARSGEVKSFGSLRASH-SSENG 457
Query: 641 XXXXXXXXXXXXXIKDADVSSV-VDGKPLKRGGGSGYGSHEKQVWV 775
+KD D SV +GK ++ S YGS+EKQVWV
Sbjct: 458 FNKHFGRRGPIHGVKDVDGYSVSSEGKHPRKPSSSAYGSNEKQVWV 503