BLASTX nr result
ID: Rehmannia25_contig00007277
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00007277
(1882 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI29694.3| unnamed protein product [Vitis vinifera] 306 2e-80
ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts... 271 9e-70
ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Popu... 256 3e-65
ref|XP_003633401.1| PREDICTED: uncharacterized protein LOC100852... 250 2e-63
ref|XP_002328787.1| predicted protein [Populus trichocarpa] gi|5... 249 4e-63
ref|XP_006349314.1| PREDICTED: regulator of nonsense transcripts... 246 3e-62
ref|XP_006339925.1| PREDICTED: regulator of nonsense transcripts... 244 9e-62
ref|XP_004230442.1| PREDICTED: uncharacterized protein LOC101264... 242 5e-61
gb|EMJ23015.1| hypothetical protein PRUPE_ppa004923mg [Prunus pe... 236 3e-59
ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Popu... 235 4e-59
ref|XP_002526435.1| conserved hypothetical protein [Ricinus comm... 233 2e-58
gb|EOX97031.1| Smg-4/UPF3 family protein, putative isoform 1 [Th... 231 1e-57
ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citr... 227 2e-56
ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts... 223 2e-55
gb|EMJ23014.1| hypothetical protein PRUPE_ppa004923mg [Prunus pe... 219 3e-54
ref|XP_004248850.1| PREDICTED: uncharacterized protein LOC101263... 216 2e-53
ref|XP_004485448.1| PREDICTED: regulator of nonsense transcripts... 203 2e-49
gb|EOX97032.1| Smg-4/UPF3 family protein, putative isoform 2, pa... 202 4e-49
emb|CAN60293.1| hypothetical protein VITISV_023400 [Vitis vinifera] 199 3e-48
ref|XP_006592654.1| PREDICTED: regulator of nonsense transcripts... 197 2e-47
>emb|CBI29694.3| unnamed protein product [Vitis vinifera]
Length = 519
Score = 306 bits (784), Expect = 2e-80
Identities = 184/374 (49%), Positives = 219/374 (58%), Gaps = 13/374 (3%)
Frame = -1
Query: 1882 RAGAPKDDPIVTPLMDYVRQXXXXXXXXXRTVLNGKPTRRVSGTSSRNPVXXXXXXXXXX 1703
RAGA KD PIVTPLMD+VRQ R++ NGK +RR SG+SS NP
Sbjct: 146 RAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLSNGKLSRRASGSSSGNPSLGSSKRGSEK 205
Query: 1702 XXXT--MYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEALEGESGSTX 1529
+ MYVLRD++K +KDKST++LV K+DDQ L DKSVN AA G EALE ESG +
Sbjct: 206 RRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDDQLLSDKSVNLAAGGGAEALEEESGVSG 265
Query: 1528 XXXXXXXXXXXXXXXIPNVSGGSLLQQNAAIPAKTSHNPAPPKQNQRREASGRIIRSILL 1349
+S LLQQN P K PKQNQRRE SGRIIRSILL
Sbjct: 266 AVDAGKKKVLLLKGKEREISH-HLLQQNVTSPVKNILGANAPKQNQRREGSGRIIRSILL 324
Query: 1348 TRDTRQPSSGP-QSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKVVSNDLHAVPT 1172
+D RQ S Q+E +SQ SN +++KRPPRPP +Q K+TNGA +DKVV ND+H+ +
Sbjct: 325 NKDARQSQSSMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGAQDDKVVGNDVHSFVS 384
Query: 1171 EKQERRTRNKDRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXXXXXAEGTHVEMKHDMLV 992
EKQ++RTRNKDRPDRGVWTPLRR EG+H EM+ DM
Sbjct: 385 EKQDKRTRNKDRPDRGVWTPLRRSDGSHASDESLSSSASQPTSSDFPEGSHGEMRSDMSN 444
Query: 991 TR--------GGRGGHYSADNGSYRHGGRRGSAYNFKDADGSSIAE--XXXXXXXXXXXX 842
R GRGGH + DNGS++H GRRG ++ KDADGSSI
Sbjct: 445 ARSGEVKALGSGRGGHSALDNGSHKHSGRRGPTHSVKDADGSSIVSEGKHSKRGSAPGYG 504
Query: 841 SHEKQVWVQKSSSG 800
SHEKQVWVQKSSSG
Sbjct: 505 SHEKQVWVQKSSSG 518
>ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Solanum tuberosum] gi|565345688|ref|XP_006339923.1|
PREDICTED: regulator of nonsense transcripts UPF3-like
isoform X2 [Solanum tuberosum]
gi|565345690|ref|XP_006339924.1| PREDICTED: regulator of
nonsense transcripts UPF3-like isoform X3 [Solanum
tuberosum]
Length = 508
Score = 271 bits (692), Expect = 9e-70
Identities = 180/376 (47%), Positives = 214/376 (56%), Gaps = 14/376 (3%)
Frame = -1
Query: 1882 RAGAPKDDPIVTPLMDYVRQXXXXXXXXXRTVLNGKPTRRVSGTSSRNPVXXXXXXXXXX 1703
RAG+ KD PIVTPLMDYVRQ R++ NGK ++ V GTSSR+P
Sbjct: 144 RAGSAKDAPIVTPLMDYVRQKRAVKSGARRSISNGKSSKSVGGTSSRSPSSTASRRGSEK 203
Query: 1702 XXXT-MYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEALEGESG---S 1535
T MYV RDSSK SKDKS Y+L+ K+ DQQL KS +SA S + +EGE G +
Sbjct: 204 RTSTTMYVQRDSSKAGNSKDKS-YILLPKRGDQQLSVKSGSSAPGSEIDVVEGEIGRSVT 262
Query: 1534 TXXXXXXXXXXXXXXXXIPNVSGGSLLQQNAAIPAKTSHNPAPPKQNQRREASGRIIRSI 1355
PNVSGGSL QQN + K S + + KQNQR+EASGRIIRSI
Sbjct: 263 ADSGKKKILLLKGKEKEGPNVSGGSLAQQNVSSALKNSPSLSALKQNQRQEASGRIIRSI 322
Query: 1354 LLTRDTRQPSSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKVVSNDLHAVP 1175
LL +D RQ S QS+ QD+D RPPRPPS+Q FQKDT+GA EDKVV N+ H V
Sbjct: 323 LL-KDARQNQSAFQSD-----QIQDKDMRPPRPPSMQLFQKDTSGANEDKVVGNEKHVVH 376
Query: 1174 TEKQERRTRNKDRPDRGVWTPLRR-XXXXXXXXXXXXXXXXXXXXXXXAEGTHVEMKHDM 998
EKQERR+RN+DRPDRGVW PLRR EG E+K+D+
Sbjct: 377 IEKQERRSRNRDRPDRGVWAPLRRADSSQASNGSLSSGIPQSSQVREFVEGGQGELKNDL 436
Query: 997 LVTRG--------GRGGHYSADNGSYRHGGRRGSAYNFKDADGSSIAEXXXXXXXXXXXX 842
+ RG GR H SADNG+Y+HGGRRG +D G+SI E
Sbjct: 437 PIARGTEFRPIGSGRNSHSSADNGNYKHGGRRG----LRDVAGTSIGEGKPVKKGGTSAY 492
Query: 841 SH-EKQVWVQKSSSGT 797
S EKQVWVQKSSSG+
Sbjct: 493 SSLEKQVWVQKSSSGS 508
>ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Populus trichocarpa]
gi|550341819|gb|ERP62848.1| hypothetical protein
POPTR_0004s23450g [Populus trichocarpa]
Length = 520
Score = 256 bits (653), Expect = 3e-65
Identities = 161/372 (43%), Positives = 203/372 (54%), Gaps = 13/372 (3%)
Frame = -1
Query: 1882 RAGAPKDDPIVTPLMDYVRQXXXXXXXXXRTVLNGKPTRRVSGTSSRNPVXXXXXXXXXX 1703
RAGA KD PIVTPLMD+VRQ R + NGK +RR G+ S +
Sbjct: 148 RAGAAKDAPIVTPLMDFVRQKRVAKNGPRRILSNGKLSRRAGGSGSPSSSSLKRGSEKKR 207
Query: 1702 XXXTMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEALEGESGSTXXX 1523
TMYVLRD++K KDKSTY+ V K+DDQQL +V + SG LE ES +
Sbjct: 208 ISTTMYVLRDTAKSTSGKDKSTYVHVPKRDDQQL-SNAVTLGSGSGTAVLEDESVVSGIT 266
Query: 1522 XXXXXXXXXXXXXIPNVS--GGSLLQQNAAIPAKTSHNPAPPKQNQRREASGRIIRSILL 1349
+S G++ QQ + + + + ++QRRE SGR+IRSILL
Sbjct: 267 DSGKKKILLLKGKEKEISLVTGTMSQQQSISSSDRNIISSTALKSQRRETSGRMIRSILL 326
Query: 1348 TRDTRQ-PSSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKVVSNDLHAVPT 1172
+D+R SSG SE + QTSN +++KRPPRPP Q KD NG P+DKVV NDLH P
Sbjct: 327 NKDSRHIRSSGVHSEPQMQTSNLEKEKRPPRPPHAQLGLKDANGTPDDKVVGNDLHGFPN 386
Query: 1171 EKQERRTRNKDRPDRGVWTPLRR--XXXXXXXXXXXXXXXXXXXXXXXAEGTHVEMKHDM 998
EKQE+RTRNKDRPDRGVWTPLRR ++G H ++K D
Sbjct: 387 EKQEKRTRNKDRPDRGVWTPLRRSDGSYASDESLLSSASQSTQSVFDSSQGNHGDVKVDS 446
Query: 997 L--------VTRGGRGGHYSADNGSYRHGGRRGSAYNFKDADGSSIAEXXXXXXXXXXXX 842
L V GRG H S DNGS++H GRRG ++ +DADGS++
Sbjct: 447 LNLRSGEVKVLGSGRGNHSSLDNGSHKHFGRRGPSHIVRDADGSTVEAKTPKRGGSSGYG 506
Query: 841 SHEKQVWVQKSS 806
SHEKQVWVQKS+
Sbjct: 507 SHEKQVWVQKST 518
>ref|XP_003633401.1| PREDICTED: uncharacterized protein LOC100852735 [Vitis vinifera]
Length = 322
Score = 250 bits (638), Expect = 2e-63
Identities = 141/278 (50%), Positives = 170/278 (61%), Gaps = 9/278 (3%)
Frame = -1
Query: 1690 MYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEALEGESGSTXXXXXXX 1511
MYVLRD++K +KDKST++LV K+DDQ L DKSVN AA G EALE ESG +
Sbjct: 1 MYVLRDTAKSTSAKDKSTFILVPKRDDQLLSDKSVNLAAGGGAEALEEESGVSGAVDAGK 60
Query: 1510 XXXXXXXXXIPNVSGGSLLQQNAAIPAKTSHNPAPPKQNQRREASGRIIRSILLTRDTRQ 1331
+S LLQQN P K PKQNQRRE SGRIIRSILL +D RQ
Sbjct: 61 KKVLLLKGKEREISH-HLLQQNVTSPVKNILGANAPKQNQRREGSGRIIRSILLNKDARQ 119
Query: 1330 PSSGP-QSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKVVSNDLHAVPTEKQERR 1154
S Q+E +SQ SN +++KRPPRPP +Q K+TNGA +DKVV ND+H+ +EKQ++R
Sbjct: 120 SQSSMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGAQDDKVVGNDVHSFVSEKQDKR 179
Query: 1153 TRNKDRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXXXXXAEGTHVEMKHDMLVTR---- 986
TRNKDRPDRGVWTPLRR EG+H EM+ DM R
Sbjct: 180 TRNKDRPDRGVWTPLRRSDGSHASDESLSSSASQPTSSDFPEGSHGEMRSDMSNARSGEV 239
Query: 985 ----GGRGGHYSADNGSYRHGGRRGSAYNFKDADGSSI 884
GRGGH + DNGS++H GRRG ++ KDADGSSI
Sbjct: 240 KALGSGRGGHSALDNGSHKHSGRRGPTHSVKDADGSSI 277
>ref|XP_002328787.1| predicted protein [Populus trichocarpa]
gi|566168252|ref|XP_006385052.1| Smg-4/UPF3 family
protein [Populus trichocarpa] gi|550341820|gb|ERP62849.1|
Smg-4/UPF3 family protein [Populus trichocarpa]
Length = 527
Score = 249 bits (635), Expect = 4e-63
Identities = 161/379 (42%), Positives = 203/379 (53%), Gaps = 20/379 (5%)
Frame = -1
Query: 1882 RAGAPKDDPIVTPLMDYVRQXXXXXXXXXRTVLNGKPTRRVSGTSSRNPVXXXXXXXXXX 1703
RAGA KD PIVTPLMD+VRQ R + NGK +RR G+ S +
Sbjct: 148 RAGAAKDAPIVTPLMDFVRQKRVAKNGPRRILSNGKLSRRAGGSGSPSSSSLKRGSEKKR 207
Query: 1702 XXXTMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEALEGESGSTXXX 1523
TMYVLRD++K KDKSTY+ V K+DDQQL +V + SG LE ES +
Sbjct: 208 ISTTMYVLRDTAKSTSGKDKSTYVHVPKRDDQQL-SNAVTLGSGSGTAVLEDESVVSGIT 266
Query: 1522 XXXXXXXXXXXXXIPNVS--GGSLLQQNAAIPAKTSHNPAPPKQNQRREASGRIIRSILL 1349
+S G++ QQ + + + + ++QRRE SGR+IRSILL
Sbjct: 267 DSGKKKILLLKGKEKEISLVTGTMSQQQSISSSDRNIISSTALKSQRRETSGRMIRSILL 326
Query: 1348 TRDTRQ-PSSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKVVSNDLHAVPT 1172
+D+R SSG SE + QTSN +++KRPPRPP Q KD NG P+DKVV NDLH P
Sbjct: 327 NKDSRHIRSSGVHSEPQMQTSNLEKEKRPPRPPHAQLGLKDANGTPDDKVVGNDLHGFPN 386
Query: 1171 EKQERRTRNKDRPDRGVWTPLRR--XXXXXXXXXXXXXXXXXXXXXXXAEGTHVEMKHDM 998
EKQE+RTRNKDRPDRGVWTPLRR ++G H ++K D
Sbjct: 387 EKQEKRTRNKDRPDRGVWTPLRRSDGSYASDESLLSSASQSTQSVFDSSQGNHGDVKVDS 446
Query: 997 L--------VTRGGRGGHYSADNGSYRHGGRRGSAYNFKDADGSSIAEXXXXXXXXXXXX 842
L V GRG H S DNGS++H GRRG ++ +DADGS++
Sbjct: 447 LNLRSGEVKVLGSGRGNHSSLDNGSHKHFGRRGPSHIVRDADGSTVEAKTPKRGGSSGYG 506
Query: 841 SHE-------KQVWVQKSS 806
SHE KQVWVQKS+
Sbjct: 507 SHEVCSLDSQKQVWVQKST 525
>ref|XP_006349314.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Solanum
tuberosum]
Length = 483
Score = 246 bits (627), Expect = 3e-62
Identities = 168/377 (44%), Positives = 205/377 (54%), Gaps = 15/377 (3%)
Frame = -1
Query: 1882 RAGAPKDDPIVTPLMDYVRQXXXXXXXXXRTVLNGKPTRRVSGTSSRNPVXXXXXXXXXX 1703
RAG+ KD PIVTPLMDY+RQ +++ NG+PTRR SGTS+ +P
Sbjct: 146 RAGSAKDAPIVTPLMDYIRQKRAAKSGARKSIANGRPTRRTSGTSTGSPSSSASKRSSEK 205
Query: 1702 XXXT--MYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEALEGESGSTX 1529
+ MYVLRDSSK KDK TY+L K+DDQQ +KS SAA S A+E E+G
Sbjct: 206 RRASTTMYVLRDSSKAGSGKDK-TYILAPKRDDQQRAEKSGTSAAGSVANAVEEETG--- 261
Query: 1528 XXXXXXXXXXXXXXXIPNVSGGSLLQQNAAIPAKTSHNPAPPKQNQRREASGRIIRSILL 1349
G + + + + K NP NQRREASGRIIRSILL
Sbjct: 262 --------------------GAADVGKKKILLLKEKENP----NNQRREASGRIIRSILL 297
Query: 1348 TRDTRQ---PSSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKVVSNDLHAV 1178
+D RQ PS+ Q + R D+DK+PPRPPS+Q FQ++TNGA EDKV+ DLH V
Sbjct: 298 -KDARQNQAPSASQQDKHRV-----DKDKKPPRPPSVQLFQRETNGANEDKVLGADLHIV 351
Query: 1177 PTEKQERRTRNKDRPDRGVWTPLRR-XXXXXXXXXXXXXXXXXXXXXXXAEGTHVEMKHD 1001
TEKQE+RTR +DRPDRGVWTPLRR EG+ E KH
Sbjct: 352 HTEKQEKRTRIRDRPDRGVWTPLRRSDSLHASDESLSSSASQSSEVPDFVEGSQGETKHG 411
Query: 1000 MLVTRG--------GRGGHYSADNGSYRHGGRRGSAYNFKDADGSSIAE-XXXXXXXXXX 848
+ RG GR + S DNG+Y+HGGRRG +D DG S+ E
Sbjct: 412 LANARGAEFRPMGSGRNSYSSFDNGTYKHGGRRG----MRD-DGISVGEGKPLRRGGPSS 466
Query: 847 XXSHEKQVWVQKSSSGT 797
+HEKQVWVQKSSSGT
Sbjct: 467 YGTHEKQVWVQKSSSGT 483
>ref|XP_006339925.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X4
[Solanum tuberosum]
Length = 482
Score = 244 bits (623), Expect = 9e-62
Identities = 169/373 (45%), Positives = 204/373 (54%), Gaps = 11/373 (2%)
Frame = -1
Query: 1882 RAGAPKDDPIVTPLMDYVRQXXXXXXXXXRTVLNGKPTRRVSGTSSRNPVXXXXXXXXXX 1703
RAG+ KD PIVTPLMDYVRQ R++ NGK ++ V GTSSR+P
Sbjct: 144 RAGSAKDAPIVTPLMDYVRQKRAVKSGARRSISNGKSSKSVGGTSSRSPSSTASRRGSEK 203
Query: 1702 XXXT-MYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEALEGESGSTXX 1526
T MYV RDSSK SKDKS Y+L+ K+ DQQL KS +SA S + +EGE G +
Sbjct: 204 RTSTTMYVQRDSSKAGNSKDKS-YILLPKRGDQQLSVKSGSSAPGSEIDVVEGEIGRS-- 260
Query: 1525 XXXXXXXXXXXXXXIPNVSGGSLLQQNAAIPAKTSHNPAPPKQNQRREASGRIIRSILLT 1346
V+ S ++ + K P NQR+EASGRIIRSILL
Sbjct: 261 -----------------VTADSGKKKILLLKGKEKEGP----NNQRQEASGRIIRSILL- 298
Query: 1345 RDTRQPSSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKVVSNDLHAVPTEK 1166
+D RQ S QS+ QD+D RPPRPPS+Q FQKDT+GA EDKVV N+ H V EK
Sbjct: 299 KDARQNQSAFQSD-----QIQDKDMRPPRPPSMQLFQKDTSGANEDKVVGNEKHVVHIEK 353
Query: 1165 QERRTRNKDRPDRGVWTPLRR-XXXXXXXXXXXXXXXXXXXXXXXAEGTHVEMKHDMLVT 989
QERR+RN+DRPDRGVW PLRR EG E+K+D+ +
Sbjct: 354 QERRSRNRDRPDRGVWAPLRRADSSQASNGSLSSGIPQSSQVREFVEGGQGELKNDLPIA 413
Query: 988 RG--------GRGGHYSADNGSYRHGGRRGSAYNFKDADGSSIAEXXXXXXXXXXXXSH- 836
RG GR H SADNG+Y+HGGRRG +D G+SI E S
Sbjct: 414 RGTEFRPIGSGRNSHSSADNGNYKHGGRRG----LRDVAGTSIGEGKPVKKGGTSAYSSL 469
Query: 835 EKQVWVQKSSSGT 797
EKQVWVQKSSSG+
Sbjct: 470 EKQVWVQKSSSGS 482
>ref|XP_004230442.1| PREDICTED: uncharacterized protein LOC101264766 [Solanum
lycopersicum]
Length = 485
Score = 242 bits (617), Expect = 5e-61
Identities = 167/377 (44%), Positives = 204/377 (54%), Gaps = 15/377 (3%)
Frame = -1
Query: 1882 RAGAPKDDPIVTPLMDYVRQXXXXXXXXXRTVLNGKPTRRVSGTSSRNPVXXXXXXXXXX 1703
RAG+ KD PIVTPLMDY+RQ +++ NG+PTRR SGTS+ +P
Sbjct: 146 RAGSAKDAPIVTPLMDYIRQKRAAKSGARKSIANGRPTRRASGTSAGSPSSSASKRSSEK 205
Query: 1702 XXXT--MYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEALEGESGSTX 1529
+ MYVLRDSSK KDK TY+L K+DDQQ +KS SA S A+E E+G
Sbjct: 206 RRASTTMYVLRDSSKAGSGKDK-TYILAPKRDDQQRAEKSGTSAPGSVANAVEEETGGAA 264
Query: 1528 XXXXXXXXXXXXXXXIPNVSGGSLLQQNAAIPAKTSHNPAPPKQNQRREASGRIIRSILL 1349
+V +L + K NP NQRREASGRIIRSILL
Sbjct: 265 -----------------DVGKKKIL----LLKEKEKENP----NNQRREASGRIIRSILL 299
Query: 1348 TRDTRQ---PSSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKVVSNDLHAV 1178
+D RQ PS+ Q + R D+DK+PPRPPS+Q FQ++TNGA ED+V+ DLH V
Sbjct: 300 -KDARQNQAPSASQQEKHRV-----DKDKKPPRPPSVQLFQRETNGANEDRVLGADLHVV 353
Query: 1177 PTEKQERRTRNKDRPDRGVWTPLRR-XXXXXXXXXXXXXXXXXXXXXXXAEGTHVEMKHD 1001
TEKQE+RTR +DRPDRGVWTPLRR EG+ E KH
Sbjct: 354 HTEKQEKRTRIRDRPDRGVWTPLRRSDSLHASDESLSSSASQSSEVPDFVEGSPGETKHG 413
Query: 1000 MLVTR--------GGRGGHYSADNGSYRHGGRRGSAYNFKDADGSSIAE-XXXXXXXXXX 848
++ R GR H S DNG+Y+HGGRRG +D DG S+ E
Sbjct: 414 LVNARVAEFRPMGSGRNSHSSFDNGTYKHGGRRG----MRD-DGISVGEGKPLRRGGPSS 468
Query: 847 XXSHEKQVWVQKSSSGT 797
+HEKQVWVQKSSSGT
Sbjct: 469 YNTHEKQVWVQKSSSGT 485
>gb|EMJ23015.1| hypothetical protein PRUPE_ppa004923mg [Prunus persica]
Length = 485
Score = 236 bits (601), Expect = 3e-59
Identities = 152/365 (41%), Positives = 190/365 (52%), Gaps = 3/365 (0%)
Frame = -1
Query: 1882 RAGAPKDDPIVTPLMDYVRQXXXXXXXXXRTVLNGKPTRRVSGTSSRNP--VXXXXXXXX 1709
R+GA KD PIVTPLMD+VRQ R++ NGK +RR G SSR+P
Sbjct: 147 RSGAGKDAPIVTPLMDFVRQKRASKAGSRRSLTNGKTSRRAGGPSSRSPSLATSKRGSER 206
Query: 1708 XXXXXTMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEALEGESGSTX 1529
TMYVLRD+ K +KDKSTY+LV K+DDQQ +KSV A+ +G LE ESG +
Sbjct: 207 KRNSATMYVLRDARKNTSAKDKSTYILVPKRDDQQPSEKSVTLASAAGTHVLEEESGVSG 266
Query: 1528 XXXXXXXXXXXXXXXIPNVSGGSLLQQNAAIPAKTSHNPAPPKQNQRREASGRIIRSILL 1349
+ + Q + AK KQN RR+ +GRIIR ILL
Sbjct: 267 ADAVKKKILLLKGKEREITHVPANMSQQQSSSAKNMGGTIALKQNLRRQENGRIIRGILL 326
Query: 1348 TRDTRQP-SSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKVVSNDLHAVPT 1172
+D RQ SSG S + QTSN DRDKRPPR +Q KDTNGAP+ +V NDLH + +
Sbjct: 327 NKDARQSQSSGIYSAQQIQTSNSDRDKRPPRSQHVQLILKDTNGAPDYNIVGNDLHGICS 386
Query: 1171 EKQERRTRNKDRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXXXXXAEGTHVEMKHDMLV 992
EKQE+R RNK+RPDR VWTPL R + + H +L
Sbjct: 387 EKQEKRIRNKERPDRVVWTPLNRLDGSSASDESL--------------SSAFQPAHSLL- 431
Query: 991 TRGGRGGHYSADNGSYRHGGRRGSAYNFKDADGSSIAEXXXXXXXXXXXXSHEKQVWVQK 812
+ G ++H GRRG+ + KD DGS +A SHEKQVWVQK
Sbjct: 432 ---------DSSEGCHKHHGRRGTTHGVKDLDGSPVA--GEGKHSKRGYGSHEKQVWVQK 480
Query: 811 SSSGT 797
SSSG+
Sbjct: 481 SSSGS 485
>ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Populus trichocarpa]
gi|550312328|gb|ERP48419.1| hypothetical protein
POPTR_0022s00460g [Populus trichocarpa]
Length = 511
Score = 235 bits (600), Expect = 4e-59
Identities = 156/373 (41%), Positives = 197/373 (52%), Gaps = 11/373 (2%)
Frame = -1
Query: 1882 RAGAPKDDPIVTPLMDYVRQXXXXXXXXXRTVLNGKPTRRVSGTSSRNPVXXXXXXXXXX 1703
RAG KD PIVTPLM+++RQ R + NGKP+RR G+ S +
Sbjct: 147 RAGVAKDAPIVTPLMEFIRQKRAAKSGPRRILSNGKPSRRAGGSGSPSSSSSKRGSEKKR 206
Query: 1702 XXXTMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEALEGESGSTXXX 1523
TMYVLRD+ K K+KS Y V K DD+QL K+V + SG E E E+ +
Sbjct: 207 ASTTMYVLRDTVKGTSGKEKSIYAQVPKLDDRQL-SKAVTLGSGSGTEVSEEETAVSGIT 265
Query: 1522 XXXXXXXXXXXXXIPNVSGGSLLQQNAAIPAKTSHNPAPPKQNQRREASGRIIRSILLTR 1343
+S LQQ+ + P+ + + ++QR E+SGR+I+SILL +
Sbjct: 266 GTGKKKILLLKGKEKEIS----LQQSIS-PSDRNIISSTALKSQRHESSGRVIKSILLNK 320
Query: 1342 DTRQ-PSSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKVVSNDLHAVPTEK 1166
D+R+ SSG QSE + QTSN ++DKRPPRPP KD NG P+DKVV NDLH P EK
Sbjct: 321 DSRRIQSSGVQSEPQMQTSNLEKDKRPPRPPHALVL-KDANGTPDDKVVGNDLHGFPNEK 379
Query: 1165 QERRTRNKDRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXXXXXAEG--THVEMKHDMLV 992
QERRTRNKDRPDR VWT LRR H ++K D L
Sbjct: 380 QERRTRNKDRPDRVVWT-LRRSEGSYASDESLSSSAYLSTQSGFDSSQVNHGDVKADTLN 438
Query: 991 TR--------GGRGGHYSADNGSYRHGGRRGSAYNFKDADGSSIAEXXXXXXXXXXXXSH 836
R GR H S DNGS++H GRRG + +DADGS++ SH
Sbjct: 439 LRSGEVKALGSGRSNHSSLDNGSHKHSGRRGPPHPVRDADGSTVEGKSLKRGGASGYGSH 498
Query: 835 EKQVWVQKSSSGT 797
EKQVWVQKSSSG+
Sbjct: 499 EKQVWVQKSSSGS 511
>ref|XP_002526435.1| conserved hypothetical protein [Ricinus communis]
gi|223534215|gb|EEF35930.1| conserved hypothetical
protein [Ricinus communis]
Length = 472
Score = 233 bits (595), Expect = 2e-58
Identities = 164/373 (43%), Positives = 200/373 (53%), Gaps = 12/373 (3%)
Frame = -1
Query: 1879 AGAPKDDPIVTPLMDYVRQXXXXXXXXXRTVLNGKPTRRVSGTSSRNPVXXXXXXXXXXX 1700
A A KD PIVTPLMD+VRQ +R + T SR
Sbjct: 149 ASAAKDAPIVTPLMDFVRQ------------------KRAAKTGSR-------------- 176
Query: 1699 XXTMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEALEGESGSTXXXX 1520
YVLRDS+K KDKSTYLLV K+DDQQ DKS A+ SG E LE ES
Sbjct: 177 ----YVLRDSAKSTSGKDKSTYLLVPKRDDQQFSDKSTPFASASGTEVLEDES------- 225
Query: 1519 XXXXXXXXXXXXIPNVSGGSLLQQNAAIPAKTSHNPAPPKQNQRREASGRIIRSILLTRD 1340
I +SGG + +QNAA K + A KQ+QRRE+SGRIIRSILL +D
Sbjct: 226 ----ELYHLCLLIVQLSGG-MSKQNAASFDKNVTSSAI-KQSQRRESSGRIIRSILLNKD 279
Query: 1339 TRQ-PSSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKVVSNDLHAVPTEKQ 1163
+RQ SSG QSE + Q+SN +++KR PRP +Q KD NG+ +DK V NDLH EKQ
Sbjct: 280 SRQNQSSGFQSEQQIQSSNLEKEKRLPRPAHVQLVLKDVNGSSDDKFVGNDLHGFSGEKQ 339
Query: 1162 ERRTRNKDRPDRGVWTPLRR--XXXXXXXXXXXXXXXXXXXXXXXAEGTHVEMKHDMLVT 989
E+RTRNKDRPDR VWTPLRR ++G ++K D +
Sbjct: 340 EKRTRNKDRPDRVVWTPLRRSDGSYASDESLSSSASQSTHTGQDSSQGNLGDIKVDSSNS 399
Query: 988 R--------GGRGGHYSADNGSYRHGGRRGSAYNFKDADGSSI-AEXXXXXXXXXXXXSH 836
R GR H S DNGS++H GRRG ++ +DADGSS+ + SH
Sbjct: 400 RSGDVKTLGSGRSSHSSLDNGSHKHFGRRGPSHTVRDADGSSLEGKPSKRGGGASGYGSH 459
Query: 835 EKQVWVQKSSSGT 797
EKQVWVQKSSSG+
Sbjct: 460 EKQVWVQKSSSGS 472
>gb|EOX97031.1| Smg-4/UPF3 family protein, putative isoform 1 [Theobroma cacao]
Length = 514
Score = 231 bits (588), Expect = 1e-57
Identities = 169/379 (44%), Positives = 197/379 (51%), Gaps = 17/379 (4%)
Frame = -1
Query: 1882 RAGAPKDDPIVTPLMDYVRQXXXXXXXXXRTVLNGKPTRRVSGTSSRNP--VXXXXXXXX 1709
RAG PKD PIVTPLMD+VRQ R++ NGK +RR G+S P
Sbjct: 146 RAGVPKDTPIVTPLMDFVRQKRAAKGGSRRSLSNGKLSRRAGGSSGGTPSSASSKRGSEK 205
Query: 1708 XXXXXTMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEALEGES---G 1538
TMYVLRDS K KDKSTY+LV K+D+QQL DK V A+ G E E ES G
Sbjct: 206 RRGSTTMYVLRDSLKNASGKDKSTYILVSKRDEQQLSDKHVALASSMGTEISEEESGVPG 265
Query: 1537 STXXXXXXXXXXXXXXXXIPNVSGGSLLQQNAAIPAKTSHNPAPPKQNQRREASGRIIRS 1358
T I V+G L QQN P KT P KQN RRE GR+IR
Sbjct: 266 ITDAVKKKVLLLKGKEKEISPVAGNVLHQQNVTSPIKTILGSTPTKQNSRRE--GRMIRG 323
Query: 1357 ILLTRDTRQ-PSSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKVVSNDLHA 1181
ILL +D RQ SSG QSE + +TSN ++D+RPPR KDTN A +DKVV NDLH
Sbjct: 324 ILLNKDARQNQSSGVQSEQQIRTSNLEKDRRPPRHSHSHLVLKDTNTASDDKVVGNDLHG 383
Query: 1180 VPTEKQERRTRNKDRPDRGVWTPLRR--XXXXXXXXXXXXXXXXXXXXXXXAEGTHVEMK 1007
+EK ERR RNKDRPDRGVWT LRR EGT+ + K
Sbjct: 384 --SEKPERRCRNKDRPDRGVWT-LRRSDGSYASDESMSSSASQSALIPLDPLEGTYGDTK 440
Query: 1006 HDMLVTRG------GRGGHYSADNGSY-RHGGRRGSAYNFKDADGSSIAE--XXXXXXXX 854
D+ R G G + S DNGS+ +H RRG+ ADGSS+
Sbjct: 441 VDLSNVRSVQVKTVGSGRNSSLDNGSHNKHVSRRGAV-----ADGSSVMSDGKPGKRGCA 495
Query: 853 XXXXSHEKQVWVQKSSSGT 797
SHEKQVWVQKSSSG+
Sbjct: 496 AGYGSHEKQVWVQKSSSGS 514
>ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citrus clementina]
gi|557533707|gb|ESR44825.1| hypothetical protein
CICLE_v10000901mg [Citrus clementina]
Length = 514
Score = 227 bits (578), Expect = 2e-56
Identities = 167/380 (43%), Positives = 206/380 (54%), Gaps = 18/380 (4%)
Frame = -1
Query: 1882 RAGAPKDDPIVTPLMDYVRQXXXXXXXXXRTVLNGKPTRRVSGTSSRNPVXXXXXXXXXX 1703
RAGA K+ IVTPLMD+VRQ R + NGK +RR SG+S+ +P
Sbjct: 146 RAGAAKEALIVTPLMDFVRQKRAAKAGPRRLLSNGKLSRRASGSSTGSPASGSSKRGSDK 205
Query: 1702 XXXT--MYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEALEGESG--- 1538
+ MYVLRD++K KDKSTY+LV K+DDQ DK V+S++ +G+E + ESG
Sbjct: 206 KKASTTMYVLRDTAKNSSGKDKSTYILVPKRDDQDF-DKPVSSSSATGSEVVLEESGVPA 264
Query: 1537 STXXXXXXXXXXXXXXXXIPNVSGGSLLQQNAAIPAKTSHNPAPPKQNQRREASGRIIRS 1358
++ I VSG QQ+A++ KT + KQNQRRE SGRIIR
Sbjct: 265 NSDGGKKKVLLLKGKEREISQVSGSVSHQQSASV--KTIISSPALKQNQRRENSGRIIRG 322
Query: 1357 ILLTRDTRQ-PSSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKVVSNDLHA 1181
ILL +D RQ +SG SE Q SN ++DKRPPRP +Q KDTNG +DKV+ NDLH
Sbjct: 323 ILLNKDARQNQASGLHSE--QQISNLEKDKRPPRPSHVQLVMKDTNGVSDDKVIVNDLH- 379
Query: 1180 VPTEKQERRTRNKDRPDRGVWTPLRR--XXXXXXXXXXXXXXXXXXXXXXXAEGTHVEMK 1007
+EKQERRTRNKDRPDR WT LRR +EG + K
Sbjct: 380 --SEKQERRTRNKDRPDRAAWT-LRRSDGSYQSDESLSSSASQLSLSAVDSSEGNLGDGK 436
Query: 1006 HDMLVTR--------GGRGGHYSADNGSYRHGGRRGSAYNFKDADGSSIAE--XXXXXXX 857
D+ R GGR H S DNGS+RH GRRG + KD DGS +
Sbjct: 437 FDLSNMRSGEVKAVGGGRSSHSSVDNGSHRHIGRRGPTH-VKD-DGSPVMSEGKPLRRGG 494
Query: 856 XXXXXSHEKQVWVQKSSSGT 797
SHEKQVWVQKSSSG+
Sbjct: 495 ASGYGSHEKQVWVQKSSSGS 514
>ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Citrus
sinensis]
Length = 514
Score = 223 bits (569), Expect = 2e-55
Identities = 160/377 (42%), Positives = 197/377 (52%), Gaps = 15/377 (3%)
Frame = -1
Query: 1882 RAGAPKDDPIVTPLMDYVRQXXXXXXXXXRTVLNGKPTRRVSGTSSRNPVXXXXXXXXXX 1703
RAGA K+ IVTPLMD+VRQ R + NGK +RR SG+S+ +P
Sbjct: 146 RAGAAKEALIVTPLMDFVRQKRAAKAGPRRLLSNGKLSRRASGSSTGSPASGSSKRGSDK 205
Query: 1702 XXXT--MYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEALEGESGSTX 1529
+ MYVLRD++K KDKSTY+LV K+DDQ DK V+S++ +G+E + ESG
Sbjct: 206 KKASTTMYVLRDTAKNSSGKDKSTYILVPKRDDQDF-DKPVSSSSATGSEVVLEESGVPA 264
Query: 1528 XXXXXXXXXXXXXXXIPNVS--GGSLLQQNAAIPAKTSHNPAPPKQNQRREASGRIIRSI 1355
+S GS+ Q +A +PA KQNQRRE SGRIIR I
Sbjct: 265 NSDGGKKKVLLLKGKEREISQVSGSVSHQQSASVKNIISSPAL-KQNQRRENSGRIIRGI 323
Query: 1354 LLTRDTRQ-PSSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKVVSNDLHAV 1178
LL +D RQ +SG SE Q SN ++DKRPPRP + KDTNG +DKV+ NDLH
Sbjct: 324 LLNKDARQNQASGLHSE--QQISNLEKDKRPPRPSHVHLVMKDTNGVSDDKVIVNDLH-- 379
Query: 1177 PTEKQERRTRNKDRPDRGVWTPLRR--XXXXXXXXXXXXXXXXXXXXXXXAEGTHVEMKH 1004
+EKQERRTRNKDRPDR WT LRR +EG + K
Sbjct: 380 -SEKQERRTRNKDRPDRAAWT-LRRSDGSYQSDESLSSSASQLSLSAVDSSEGNLGDGKF 437
Query: 1003 DMLVTR--------GGRGGHYSADNGSYRHGGRRGSAYNFKDADGSSIAEXXXXXXXXXX 848
D+ R GGR H S DNGS+RH GRRG + D+
Sbjct: 438 DLSNMRSGEVKAVGGGRSSHSSVDNGSHRHIGRRGPTHVKDDSSPVMSEGKPLRRGGASG 497
Query: 847 XXSHEKQVWVQKSSSGT 797
SHEKQVWVQKSSSG+
Sbjct: 498 YGSHEKQVWVQKSSSGS 514
>gb|EMJ23014.1| hypothetical protein PRUPE_ppa004923mg [Prunus persica]
Length = 482
Score = 219 bits (558), Expect = 3e-54
Identities = 144/362 (39%), Positives = 183/362 (50%), Gaps = 3/362 (0%)
Frame = -1
Query: 1882 RAGAPKDDPIVTPLMDYVRQXXXXXXXXXRTVLNGKPTRRVSGTSSRNP--VXXXXXXXX 1709
R+GA KD PIVTPLMD+VRQ R++ NGK +RR G SSR+P
Sbjct: 147 RSGAGKDAPIVTPLMDFVRQKRASKAGSRRSLTNGKTSRRAGGPSSRSPSLATSKRGSER 206
Query: 1708 XXXXXTMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEALEGESGSTX 1529
TMYVLRD+ K +KDKSTY+LV K+DDQQ +KSV A+ +G LE ESG +
Sbjct: 207 KRNSATMYVLRDARKNTSAKDKSTYILVPKRDDQQPSEKSVTLASAAGTHVLEEESGVSG 266
Query: 1528 XXXXXXXXXXXXXXXIPNVSGGSLLQQNAAIPAKTSHNPAPPKQNQRREASGRIIRSILL 1349
+ + Q + AK KQN RR+ +GRIIR ILL
Sbjct: 267 ADAVKKKILLLKGKEREITHVPANMSQQQSSSAKNMGGTIALKQNLRRQENGRIIRGILL 326
Query: 1348 TRDTRQP-SSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKVVSNDLHAVPT 1172
+D RQ SSG S + QTSN DRDKRPPR +Q KDTNGAP+ +V NDLH + +
Sbjct: 327 NKDARQSQSSGIYSAQQIQTSNSDRDKRPPRSQHVQLILKDTNGAPDYNIVGNDLHGICS 386
Query: 1171 EKQERRTRNKDRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXXXXXAEGTHVEMKHDMLV 992
EKQE+R RNK+RPDR VWTPL R + + H +L
Sbjct: 387 EKQEKRIRNKERPDRVVWTPLNRLDGSSASDESL--------------SSAFQPAHSLL- 431
Query: 991 TRGGRGGHYSADNGSYRHGGRRGSAYNFKDADGSSIAEXXXXXXXXXXXXSHEKQVWVQK 812
+ G ++H GRRG+ + KD DGS +A SHE VW+ +
Sbjct: 432 ---------DSSEGCHKHHGRRGTTHGVKDLDGSPVA--GEGKHSKRGYGSHECDVWLLE 480
Query: 811 SS 806
S
Sbjct: 481 PS 482
>ref|XP_004248850.1| PREDICTED: uncharacterized protein LOC101263168 [Solanum
lycopersicum]
Length = 438
Score = 216 bits (551), Expect = 2e-53
Identities = 135/264 (51%), Positives = 160/264 (60%), Gaps = 4/264 (1%)
Frame = -1
Query: 1882 RAGAPKDDPIVTPLMDYVRQXXXXXXXXXRTVLNGKPTRRVSGTSSRNPVXXXXXXXXXX 1703
RAG+ KD PIVTPLMDYVRQ +++ NGK ++ V GTSSR+P
Sbjct: 144 RAGSAKDAPIVTPLMDYVRQKRAVTSGARKSISNGKSSKSVGGTSSRSPSSTASRRGSEK 203
Query: 1702 XXXT-MYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEALEGESG---S 1535
T MYV RDSSK+ SKDKS Y+L K QQL DKS SA S + +EGE G +
Sbjct: 204 RTSTTMYVQRDSSKVGNSKDKS-YILASKCGYQQLSDKSSASAPGSWIDVVEGEIGRSVT 262
Query: 1534 TXXXXXXXXXXXXXXXXIPNVSGGSLLQQNAAIPAKTSHNPAPPKQNQRREASGRIIRSI 1355
+ PNVSGGSL QQN + K S + + K NQ +E GRIIRSI
Sbjct: 263 SDSGKKKILLLKGKEKESPNVSGGSLAQQNVSSALKNSPSLSALKLNQHQEVGGRIIRSI 322
Query: 1354 LLTRDTRQPSSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKVVSNDLHAVP 1175
LL +D RQ S QS+ QD+D RPPRPPS+Q FQKDT+GA EDKVV N+ H V
Sbjct: 323 LL-KDARQNQSAFQSD-----QIQDKDMRPPRPPSMQLFQKDTSGANEDKVVGNEKHVVH 376
Query: 1174 TEKQERRTRNKDRPDRGVWTPLRR 1103
EKQERR+RN+DRPDRGVW PLRR
Sbjct: 377 IEKQERRSRNRDRPDRGVWAPLRR 400
>ref|XP_004485448.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
[Cicer arietinum] gi|502076758|ref|XP_004485449.1|
PREDICTED: regulator of nonsense transcripts UPF3-like
isoform X3 [Cicer arietinum]
gi|502076762|ref|XP_004485450.1| PREDICTED: regulator of
nonsense transcripts UPF3-like isoform X4 [Cicer
arietinum]
Length = 510
Score = 203 bits (517), Expect = 2e-49
Identities = 152/380 (40%), Positives = 191/380 (50%), Gaps = 18/380 (4%)
Frame = -1
Query: 1882 RAGAPKDDPIVTPLMDYVRQXXXXXXXXXRTVLNGKPTRRV----SGTSSRNPVXXXXXX 1715
R+GA KD PIVTPLMD+VRQ + NGK TRR +G+SS P
Sbjct: 143 RSGAGKDVPIVTPLMDFVRQKRAAKGPRRLSS-NGKVTRRTGTPSNGSSSSAP--SRRGS 199
Query: 1714 XXXXXXXTMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEALE--GES 1541
TMYV RD K KDKSTY+LV +Q DQ L +KS N A+ GN + G +
Sbjct: 200 ARKRVSTTMYVARDPGKNSTVKDKSTYILVPRQGDQHLSNKSSNIASSDGNPTFDENGIA 259
Query: 1540 GSTXXXXXXXXXXXXXXXXIPNVSGGSLLQQNAAIP-AKTSHNPAPPKQNQRREASGRII 1364
GS I S+ Q ++ AKT N KQNQR E SGRII
Sbjct: 260 GSNDAGKKVLLLKGKEREIITASDSDSMSQHHSITSSAKTILNSTALKQNQRHEGSGRII 319
Query: 1363 RSILLTRDTRQ-PSSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKVVSNDL 1187
+SIL +D RQ SS SE + QTSN +++K+P RP +Q K T+GAPE+++ + L
Sbjct: 320 KSILSNKDLRQNQSSRAYSERQLQTSNLEKEKQPTRPLHVQLILKGTDGAPENRITVHGL 379
Query: 1186 HAVPTEKQERRTRNKDRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXXXXXAEGTHVEMK 1007
H V +E+QERR R KDRPDRG+WT EG H E+K
Sbjct: 380 H-VSSERQERRFRQKDRPDRGIWTSRSNGGDESLSSSASSQVDPL-------EGGHAELK 431
Query: 1006 HDMLVTRGG--------RGGHYSADNGSYRHGGRRGSAYNFKDADGSSIAE--XXXXXXX 857
HD R G R H S++NG +H GRRG + KD DG S++
Sbjct: 432 HDTRSARSGEVKSFGSLRASH-SSENGFNKHFGRRGPIHGVKDVDGYSVSSEGKHPRKPS 490
Query: 856 XXXXXSHEKQVWVQKSSSGT 797
S+EKQVWVQK+SSGT
Sbjct: 491 SSAYGSNEKQVWVQKASSGT 510
>gb|EOX97032.1| Smg-4/UPF3 family protein, putative isoform 2, partial [Theobroma
cacao]
Length = 440
Score = 202 bits (514), Expect = 4e-49
Identities = 133/266 (50%), Positives = 152/266 (57%), Gaps = 6/266 (2%)
Frame = -1
Query: 1882 RAGAPKDDPIVTPLMDYVRQXXXXXXXXXRTVLNGKPTRRVSGTSSRNP--VXXXXXXXX 1709
RAG PKD PIVTPLMD+VRQ R++ NGK +RR G+S P
Sbjct: 153 RAGVPKDTPIVTPLMDFVRQKRAAKGGSRRSLSNGKLSRRAGGSSGGTPSSASSKRGSEK 212
Query: 1708 XXXXXTMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEALEGES---G 1538
TMYVLRDS K KDKSTY+LV K+D+QQL DK V A+ G E E ES G
Sbjct: 213 RRGSTTMYVLRDSLKNASGKDKSTYILVSKRDEQQLSDKHVALASSMGTEISEEESGVPG 272
Query: 1537 STXXXXXXXXXXXXXXXXIPNVSGGSLLQQNAAIPAKTSHNPAPPKQNQRREASGRIIRS 1358
T I V+G L QQN P KT P KQN RRE GR+IR
Sbjct: 273 ITDAVKKKVLLLKGKEKEISPVAGNVLHQQNVTSPIKTILGSTPTKQNSRRE--GRMIRG 330
Query: 1357 ILLTRDTRQ-PSSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKVVSNDLHA 1181
ILL +D RQ SSG QSE + +TSN ++D+RPPR KDTN A +DKVV NDLH
Sbjct: 331 ILLNKDARQNQSSGVQSEQQIRTSNLEKDRRPPRHSHSHLVLKDTNTASDDKVVGNDLHG 390
Query: 1180 VPTEKQERRTRNKDRPDRGVWTPLRR 1103
+EK ERR RNKDRPDRGVWT LRR
Sbjct: 391 --SEKPERRCRNKDRPDRGVWT-LRR 413
>emb|CAN60293.1| hypothetical protein VITISV_023400 [Vitis vinifera]
Length = 304
Score = 199 bits (507), Expect = 3e-48
Identities = 106/201 (52%), Positives = 127/201 (63%), Gaps = 9/201 (4%)
Frame = -1
Query: 1459 LLQQNAAIPAKTSHNPAPPKQNQRREASGRIIRSILLTRDTRQPSSGP-QSELRSQTSNQ 1283
LLQQN P K PKQNQRRE SGRIIRSILL +D RQ S Q+E +SQ SN
Sbjct: 33 LLQQNVTSPVKNILGANAPKQNQRREGSGRIIRSILLNKDARQSQSSMFQTEQQSQASNL 92
Query: 1282 DRDKRPPRPPSLQSFQKDTNGAPEDKVVSNDLHAVPTEKQERRTRNKDRPDRGVWTPLRR 1103
+++KRPPRPP +Q K+TNGA +DKVV ND+H+ +EKQ++RTRNKDRPDRGVWTPLRR
Sbjct: 93 EKEKRPPRPPHIQLASKETNGAQDDKVVGNDVHSFVSEKQDKRTRNKDRPDRGVWTPLRR 152
Query: 1102 XXXXXXXXXXXXXXXXXXXXXXXAEGTHVEMKHDMLVTR--------GGRGGHYSADNGS 947
EG+H EM+ DM R GRGGH + DNGS
Sbjct: 153 SDGSHASDESLSSSASQPTSSDFPEGSHGEMRSDMSNARSGEVKALGSGRGGHSALDNGS 212
Query: 946 YRHGGRRGSAYNFKDADGSSI 884
++H GRRG ++ KDADGSSI
Sbjct: 213 HKHSGRRGPTHSVKDADGSSI 233
>ref|XP_006592654.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Glycine max] gi|571493781|ref|XP_006592655.1| PREDICTED:
regulator of nonsense transcripts UPF3-like isoform X2
[Glycine max]
Length = 514
Score = 197 bits (500), Expect = 2e-47
Identities = 145/378 (38%), Positives = 189/378 (50%), Gaps = 16/378 (4%)
Frame = -1
Query: 1882 RAGAPKDDPIVTPLMDYVRQXXXXXXXXXRTVLNGKPTRRVSGTSSRNP--VXXXXXXXX 1709
R+GA KD PI+TPLMD+VRQ + NGK +RR +S+ P
Sbjct: 146 RSGAAKDIPIITPLMDFVRQKRAAKGPRRP-LSNGKVSRRAGTSSNGGPSSATSRRGSGK 204
Query: 1708 XXXXXTMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEALE--GESGS 1535
TMYV RD K KDKS+Y LV KQDDQ L +K+ N A+ GN+ L+ G SG+
Sbjct: 205 KRVSATMYVARDPGKSSTIKDKSSYTLVPKQDDQHLPNKASNMASSDGNQTLDENGVSGN 264
Query: 1534 TXXXXXXXXXXXXXXXXIPNVSGGSLLQQ--NAAIPAKTSHNPAPPKQNQRREASGRIIR 1361
I VS + Q N AKT KQ+QR E SGRIIR
Sbjct: 265 HDAGKKKVLLLKGKEREIITVSDLDSMSQHHNVTSSAKTVVGSTVLKQSQRHEGSGRIIR 324
Query: 1360 SILLTRDTRQP-SSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKVVSNDLH 1184
SIL ++ Q SS SE + TSN +++K+PPRP +Q K +NG PE+K+ +D H
Sbjct: 325 SILSKKELHQSQSSRALSEQKILTSNLEKEKQPPRPLHVQLILKGSNGTPENKIGVHDSH 384
Query: 1183 AVPTEKQERRTRNKDRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXXXXXAEGTHVEMKH 1004
V +E+QER R+KDRPDRGVWT EG+ ++KH
Sbjct: 385 -VSSERQERHVRHKDRPDRGVWTS-------RFNGADVSFSSPASSQVDPLEGSQADLKH 436
Query: 1003 DMLVTR-------GGRGGHYSADNGSYRHGGRRGSAYNFKDADGSSIAE--XXXXXXXXX 851
DM R G +S++NG +H GRRG +Y KD DG S++
Sbjct: 437 DMPNARSVEVKSFGSVRTSHSSENGFNKHFGRRGPSYGVKDVDGYSVSSEGKHPRRSSTS 496
Query: 850 XXXSHEKQVWVQKSSSGT 797
S+EKQVWVQK+SSG+
Sbjct: 497 AYGSNEKQVWVQKASSGS 514