BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00007205
         (657 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309173.2| pentatricopeptide repeat-containing family p...   152   8e-35
ref|XP_006429524.1| hypothetical protein CICLE_v10013613mg [Citr...   150   3e-34
ref|XP_004246310.1| PREDICTED: pentatricopeptide repeat-containi...   142   7e-32
gb|EOY07026.1| Pentatricopeptide repeat superfamily protein, put...   142   1e-31
ref|XP_002265961.1| PREDICTED: pentatricopeptide repeat-containi...   135   1e-29
ref|XP_003623530.1| Pentatricopeptide repeat-containing protein ...   133   5e-29
gb|EXB42398.1| hypothetical protein L484_021993 [Morus notabilis]     130   4e-28
ref|XP_004305097.1| PREDICTED: pentatricopeptide repeat-containi...   127   4e-27
gb|ESW12162.1| hypothetical protein PHAVU_008G089500g [Phaseolus...   125   8e-27
ref|XP_003533674.1| PREDICTED: pentatricopeptide repeat-containi...   125   1e-26
gb|ESW10362.1| hypothetical protein PHAVU_009G202600g [Phaseolus...   121   2e-25
gb|AHB18409.1| pentatricopeptide repeat-containing protein [Goss...   118   2e-24
ref|XP_004137893.1| PREDICTED: pentatricopeptide repeat-containi...   117   2e-24
ref|XP_006411054.1| hypothetical protein EUTSA_v10017948mg [Eutr...    97   3e-18
ref|XP_006294146.1| hypothetical protein CARUB_v10023139mg [Caps...    97   5e-18
ref|NP_181376.3| pentatricopeptide repeat-containing protein [Ar...    95   2e-17
gb|AAM98219.1| unknown protein [Arabidopsis thaliana] gi|3137637...    95   2e-17
ref|XP_002879744.1| pentatricopeptide repeat-containing protein ...    94   3e-17
emb|CAN63706.1| hypothetical protein VITISV_013107 [Vitis vinifera]    82   1e-13

>ref|XP_002309173.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550335936|gb|EEE92696.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 490

 Score =  152 bits (384), Expect = 8e-35
 Identities = 77/173 (44%), Positives = 109/173 (63%), Gaps = 7/173 (4%)
 Frame = -2

Query: 500 NYYIRKRRKWPIRPYKTQWDQIFAFRLAKQSFKQSIRK-------TKTHLLSDLVNSFSA 342
           ++++RK RKWP  PYK +W +IF  + A QS KQS  K        K HLLS L++SFS 
Sbjct: 11  SFFLRKHRKWPYSPYKARWHRIFNQQQAMQSLKQSALKPPQQESPNKPHLLSSLIHSFSI 70

Query: 341 YEVNPTPQSYHLLFKILIQKRPSNRHVQIQEILNHIEKGESFETPECVFIDLIKFYGDTN 162
           Y+V P P+++  +FK L++   +++   I  +L+H+EK ESFE PE  F  LI+ YG TN
Sbjct: 71  YDVEPAPKAFDFIFKTLVK---TSQFHHIPSVLDHLEKVESFEPPESTFAYLIEVYGRTN 127

Query: 161 MFNYAVELIFRLPRFRCDPXXXXXXXXXXXLCRNKRGFEMVPRVLLKSQVMKI 3
             + A+EL +R+P+FRC P           LCRN +G ++VP +LLKSQVM I
Sbjct: 128 KTHEAIELFYRIPKFRCVPSVYSLNTLISVLCRNSKGLKLVPEILLKSQVMNI 180


>ref|XP_006429524.1| hypothetical protein CICLE_v10013613mg [Citrus clementina]
           gi|557531581|gb|ESR42764.1| hypothetical protein
           CICLE_v10013613mg [Citrus clementina]
          Length = 506

 Score =  150 bits (379), Expect = 3e-34
 Identities = 76/176 (43%), Positives = 107/176 (60%), Gaps = 10/176 (5%)
 Frame = -2

Query: 500 NYYIRKRRKWPIRPYKTQWDQIFAFRLAKQSFKQSIRKTKT----------HLLSDLVNS 351
           N ++RK RKWP+ PYK +W Q    + AKQ+ KQS+    T          H+LS L++S
Sbjct: 11  NLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQPHILSSLLHS 70

Query: 350 FSAYEVNPTPQSYHLLFKILIQKRPSNRHVQIQEILNHIEKGESFETPECVFIDLIKFYG 171
           FS Y   P P++YH + K L +   +++   I  +L+HIEK E+FETPE +FIDLIK Y 
Sbjct: 71  FSIYNCEPPPEAYHFVIKTLAE---NSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYA 127

Query: 170 DTNMFNYAVELIFRLPRFRCDPXXXXXXXXXXXLCRNKRGFEMVPRVLLKSQVMKI 3
           D + F  +V L +++P+FRC P           LCRNK   +MVP++LLKSQ+M I
Sbjct: 128 DAHRFQDSVNLFYKIPKFRCVPSVYSLNALLSVLCRNKEWVKMVPQILLKSQLMNI 183


>ref|XP_004246310.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial-like [Solanum lycopersicum]
          Length = 496

 Score =  142 bits (359), Expect = 7e-32
 Identities = 77/171 (45%), Positives = 111/171 (64%), Gaps = 3/171 (1%)
 Frame = -2

Query: 506 LHNYYIRKRRKWPIRPYKTQW-DQIFAFRLAKQSFKQSI--RKTKTHLLSDLVNSFSAYE 336
           ++NY++RKRRKWP+  YKT+W ++    +L+ Q   +S   R  KTHLLS L++SFSAYE
Sbjct: 27  MNNYFLRKRRKWPLSLYKTKWQEEKLTHQLSMQKLVESTPNRSPKTHLLSILLDSFSAYE 86

Query: 335 VNPTPQSYHLLFKILIQKRPSNRHVQIQEILNHIEKGESFETPECVFIDLIKFYGDTNMF 156
            +PTP +Y+ + K L Q  PS    +I  IL++I K E+FETPE +F  LIKFYGD+NM 
Sbjct: 87  CDPTPNAYYFILKTLTQN-PSTWD-EIPLILDYIRKFENFETPEYIFTYLIKFYGDSNMT 144

Query: 155 NYAVELIFRLPRFRCDPXXXXXXXXXXXLCRNKRGFEMVPRVLLKSQVMKI 3
           + A E+ F +P +RC+P           LC+N     +V +VL+KSQ++ I
Sbjct: 145 HLAYEMFFTMPAYRCNPSVKSLNCLIWVLCKNNYDLRIVLQVLVKSQLLNI 195


>gb|EOY07026.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao]
          Length = 542

 Score =  142 bits (357), Expect = 1e-31
 Identities = 76/171 (44%), Positives = 102/171 (59%), Gaps = 5/171 (2%)
 Frame = -2

Query: 500 NYYIRKRRKWPIRPYKTQWDQIFAFRLAKQSFKQSIRKTKTHL-----LSDLVNSFSAYE 336
           N ++RK R+WP   YKT+W+Q F  + A  SFKQ +   + +L     LS LV SFS Y 
Sbjct: 54  NLFLRKHRRWPHFAYKTKWNQTFTQKQAMLSFKQLVAVAQDNLPPPILLSTLVRSFSLYN 113

Query: 335 VNPTPQSYHLLFKILIQKRPSNRHVQIQEILNHIEKGESFETPECVFIDLIKFYGDTNMF 156
           V+PTPQ+YH L K LIQ    N    I  +L+H+E  E F+TPE +F DLI  YG  N  
Sbjct: 114 VHPTPQAYHFLIKTLIQNLHFNH---IPSVLHHLEHVEKFQTPEYIFADLITTYGIANRI 170

Query: 155 NYAVELIFRLPRFRCDPXXXXXXXXXXXLCRNKRGFEMVPRVLLKSQVMKI 3
             AV++ +R+P+FRC P           LCRN+   ++VP+VLLKS +M I
Sbjct: 171 QDAVDIFYRIPKFRCVPSAYSLNSLLALLCRNQYSLKLVPQVLLKSLLMNI 221


>ref|XP_002265961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial-like [Vitis vinifera]
          Length = 505

 Score =  135 bits (339), Expect = 1e-29
 Identities = 70/172 (40%), Positives = 98/172 (56%), Gaps = 8/172 (4%)
 Frame = -2

Query: 494 YIRKRRKWPIRPYKTQWDQIFAFRLAKQSFKQSIRK--------TKTHLLSDLVNSFSAY 339
           ++RKRRKWP+ PYK  W + F  R A Q+ K +I          + +  LS L++SF  Y
Sbjct: 12  FLRKRRKWPLSPYKATWHETFHHRQAMQTLKNTIANQSPSPQSPSNSQFLSILIDSFRIY 71

Query: 338 EVNPTPQSYHLLFKILIQKRPSNRHVQIQEILNHIEKGESFETPECVFIDLIKFYGDTNM 159
             +PTP +Y  +   L + R  +    +  +L+ +EK E FETPE +F +LIK YG+ NM
Sbjct: 72  NSDPTPNAYRFVISTLTRCRQFHH---LPPLLHRLEKVEKFETPEFIFTNLIKVYGNANM 128

Query: 158 FNYAVELIFRLPRFRCDPXXXXXXXXXXXLCRNKRGFEMVPRVLLKSQVMKI 3
           F  AV+L FR+P FRC P           LC+ + G  MVP++LLKSQ M I
Sbjct: 129 FEDAVDLFFRIPNFRCVPSVYSLNALLYVLCKRREGLVMVPQILLKSQAMNI 180


>ref|XP_003623530.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498545|gb|AES79748.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 653

 Score =  133 bits (334), Expect = 5e-29
 Identities = 73/170 (42%), Positives = 98/170 (57%), Gaps = 4/170 (2%)
 Frame = -2

Query: 500 NYYIRKRRKWPIRPYKTQWDQIFAFRLAKQSFKQSIRKTKTH----LLSDLVNSFSAYEV 333
           N Y+RK RKWP  PYKT W   F  + A Q    +  +T+ +    LLS L++SF AY  
Sbjct: 11  NKYLRKFRKWPHSPYKTSWHHNFGEQQAIQILINAKTQTQNNNDPFLLSTLIHSFKAYHT 70

Query: 332 NPTPQSYHLLFKILIQKRPSNRHVQIQEILNHIEKGESFETPECVFIDLIKFYGDTNMFN 153
           +P+P++Y  L K +     S+ H +I  ILNH+E  E FETPE +F+ LI+FYG  +   
Sbjct: 71  DPSPKAYFFLIKTITNINTSHLH-EIPHILNHLEHNEKFETPEFIFMYLIRFYGFNDRVQ 129

Query: 152 YAVELIFRLPRFRCDPXXXXXXXXXXXLCRNKRGFEMVPRVLLKSQVMKI 3
            AV+L FR+PRFRC P           LC  +    MVP +LLKS+ MKI
Sbjct: 130 DAVDLFFRIPRFRCTPTVCSLNLLLSLLCGKRECLRMVPDILLKSRDMKI 179


>gb|EXB42398.1| hypothetical protein L484_021993 [Morus notabilis]
          Length = 494

 Score =  130 bits (326), Expect = 4e-28
 Identities = 67/168 (39%), Positives = 99/168 (58%)
 Frame = -2

Query: 506 LHNYYIRKRRKWPIRPYKTQWDQIFAFRLAKQSFKQSIRKTKTHLLSDLVNSFSAYEVNP 327
           L N ++RK R++PI PYKT+W + F    A Q+ K+   +    LLS L+NSF++Y+ NP
Sbjct: 8   LTNKFLRKHREFPISPYKTKWHETFNQTQALQTLKRHQNENPNRLLSLLLNSFNSYDCNP 67

Query: 326 TPQSYHLLFKILIQKRPSNRHVQIQEILNHIEKGESFETPECVFIDLIKFYGDTNMFNYA 147
           TP++YH + K LI+   +++   I  +L+ IE  E FETPE  F  +I FYG  +    A
Sbjct: 68  TPEAYHFVLKTLIK---TSQFDHIHSVLDRIEFVEKFETPEYFFAQIIGFYGFLDRIEDA 124

Query: 146 VELIFRLPRFRCDPXXXXXXXXXXXLCRNKRGFEMVPRVLLKSQVMKI 3
           +++ +R+P+FRC P           LCR   G   VP VL+KS+ M I
Sbjct: 125 IDIFWRIPKFRCVPSSYSLNSLLYVLCRRNEGLRFVPEVLIKSRDMNI 172


>ref|XP_004305097.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 491

 Score =  127 bits (318), Expect = 4e-27
 Identities = 60/165 (36%), Positives = 97/165 (58%)
 Frame = -2

Query: 497 YYIRKRRKWPIRPYKTQWDQIFAFRLAKQSFKQSIRKTKTHLLSDLVNSFSAYEVNPTPQ 318
           +++RK RKWP+ PY T+W ++F    A Q+ K S       LLS L++SF+ +  +PTP+
Sbjct: 13  FFVRKHRKWPVSPYNTKWHKLFNQHQALQTLKHSPLNPPQTLLSTLIHSFNTFNCDPTPE 72

Query: 317 SYHLLFKILIQKRPSNRHVQIQEILNHIEKGESFETPECVFIDLIKFYGDTNMFNYAVEL 138
           +Y+ + K L +   +++   I  +L+ +E  E F  PE +F +LI+FYG  N    A+++
Sbjct: 73  AYNFVLKTLFK---TSQLSHIPSVLDRLESIEKFHPPESIFANLIRFYGSANRVEDAIDV 129

Query: 137 IFRLPRFRCDPXXXXXXXXXXXLCRNKRGFEMVPRVLLKSQVMKI 3
             R+P+FRCDP           LC +  G +MVP+VL+ S+ M I
Sbjct: 130 FCRIPKFRCDPSAVSLNSLLYVLCGSSEGLKMVPQVLMNSRAMGI 174


>gb|ESW12162.1| hypothetical protein PHAVU_008G089500g [Phaseolus vulgaris]
          Length = 514

 Score =  125 bits (315), Expect = 8e-27
 Identities = 71/176 (40%), Positives = 99/176 (56%), Gaps = 10/176 (5%)
 Frame = -2

Query: 500 NYYIRKRRKWPIRPYKTQWDQIFAFRLAKQSFKQSIRKT---------KTHLLSDLVNSF 348
           N Y+RK RKWP  PYKT W   F  + A    KQ+  +             LLS L+++F
Sbjct: 11  NKYLRKFRKWPHSPYKTSWHHNFGEQQAMHKLKQATLEMGCPQTPNLPHPFLLSTLLDAF 70

Query: 347 SAYEVNPTPQSYHLLFKILIQKRPSNRHVQ-IQEILNHIEKGESFETPECVFIDLIKFYG 171
            AY  +PTP++Y+ + K L     S  H+Q I  +L+H+E+ E+FETPE + + LI+FYG
Sbjct: 71  KAYSCDPTPKAYYFVIKTLT----STSHLQDIPPVLDHLEQLETFETPEFILVYLIRFYG 126

Query: 170 DTNMFNYAVELIFRLPRFRCDPXXXXXXXXXXXLCRNKRGFEMVPRVLLKSQVMKI 3
            ++    AV+L  R+PRFRC P           LCR +   +MVP +LLKSQ M I
Sbjct: 127 LSDRVQDAVDLFLRIPRFRCTPTVWSLNLVLSLLCRKRECLKMVPEILLKSQHMNI 182


>ref|XP_003533674.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial-like [Glycine max]
          Length = 499

 Score =  125 bits (313), Expect = 1e-26
 Identities = 70/178 (39%), Positives = 98/178 (55%), Gaps = 12/178 (6%)
 Frame = -2

Query: 500 NYYIRKRRKWPIRPYKTQWDQIFAFRLAKQSFKQSIRKTKTH------------LLSDLV 357
           N Y+RK +KWP  PYKT W   F    A ++ KQ+  +  +             LLS L+
Sbjct: 11  NKYLRKFKKWPHSPYKTSWHHNFGEEQAMKNLKQATLEMDSSQHPQRPNLPCPFLLSTLL 70

Query: 356 NSFSAYEVNPTPQSYHLLFKILIQKRPSNRHVQIQEILNHIEKGESFETPECVFIDLIKF 177
           +SF AY ++PTP++Y  + K L     +++   I  +L H+E  E FETPE + + LI+F
Sbjct: 71  DSFKAYSIDPTPKAYFFVLKTLTS---TSQLQDIPPVLYHLEHLEKFETPESILVYLIRF 127

Query: 176 YGDTNMFNYAVELIFRLPRFRCDPXXXXXXXXXXXLCRNKRGFEMVPRVLLKSQVMKI 3
           YG ++    AV+L FR+PRFRC P           LCR +   EMVP +LLKSQ M I
Sbjct: 128 YGLSDRVQDAVDLFFRIPRFRCTPTVCSLNLVLSLLCRKRDCLEMVPEILLKSQHMNI 185


>gb|ESW10362.1| hypothetical protein PHAVU_009G202600g [Phaseolus vulgaris]
          Length = 513

 Score =  121 bits (304), Expect = 2e-25
 Identities = 69/175 (39%), Positives = 95/175 (54%), Gaps = 9/175 (5%)
 Frame = -2

Query: 500 NYYIRKRRKWPIRPYKTQWDQIFAFRLAKQSFKQSIRKT---------KTHLLSDLVNSF 348
           N Y+RK RKWP  PYKT W   F  + A    KQ+  +             LLS L++SF
Sbjct: 11  NKYLRKFRKWPHSPYKTSWHHNFGEQQAMHKLKQATLEMGCPQTPNLPHPFLLSTLIDSF 70

Query: 347 SAYEVNPTPQSYHLLFKILIQKRPSNRHVQIQEILNHIEKGESFETPECVFIDLIKFYGD 168
            +Y  +PTP++Y+ L K L     +++   I  +L+H+E  E FETPE   + LI+FYG 
Sbjct: 71  KSYSCDPTPKAYYFLIKTLTC---TSQFQDIPPVLDHLEHLEKFETPEFNLVYLIRFYGL 127

Query: 167 TNMFNYAVELIFRLPRFRCDPXXXXXXXXXXXLCRNKRGFEMVPRVLLKSQVMKI 3
           ++    AV+L  R+PRFRC P           LCR +   +MVP +LLKSQ M I
Sbjct: 128 SDKVQDAVDLFLRIPRFRCTPTVCSLNLVLSLLCRKRECLKMVPEILLKSQHMNI 182


>gb|AHB18409.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
          Length = 480

 Score =  118 bits (295), Expect = 2e-24
 Identities = 63/170 (37%), Positives = 98/170 (57%), Gaps = 4/170 (2%)
 Frame = -2

Query: 500 NYYIRKRRKWP-IRPYKTQWDQIFAFRLAKQSFKQSIRK---TKTHLLSDLVNSFSAYEV 333
           N+++RK RKWP I  +KT+W Q F       SFKQ + +    +   +  L+ S S Y +
Sbjct: 7   NFFLRKHRKWPLISSHKTKWRQAFTQNQPMVSFKQLVARHNPLQPDFVPSLLQSLSLYNL 66

Query: 332 NPTPQSYHLLFKILIQKRPSNRHVQIQEILNHIEKGESFETPECVFIDLIKFYGDTNMFN 153
           + +PQ+YH L K L+  R  +    I  +L+H++  + F+TPE +F  L+KFYG  N   
Sbjct: 67  HQSPQAYHFLIKTLLHNRQFHH---IPSLLHHLQL-QHFQTPEYIFTHLVKFYGKANRIQ 122

Query: 152 YAVELIFRLPRFRCDPXXXXXXXXXXXLCRNKRGFEMVPRVLLKSQVMKI 3
            AV++ +R+P+FRC P           LCR++RG +++P+VLL S  M I
Sbjct: 123 DAVDIFYRIPQFRCFPSAYSLNALLALLCRSQRGLKLLPQVLLNSLHMNI 172


>ref|XP_004137893.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial-like [Cucumis sativus]
           gi|449483740|ref|XP_004156675.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial-like [Cucumis sativus]
          Length = 491

 Score =  117 bits (294), Expect = 2e-24
 Identities = 67/167 (40%), Positives = 94/167 (56%), Gaps = 1/167 (0%)
 Frame = -2

Query: 500 NYYIRKRRKWPIRPYKTQWDQIFAFRLAKQSFKQSIRKTKTHLL-SDLVNSFSAYEVNPT 324
           N ++RK RKWP+  +KT+W Q F    A +  KQ+    + HLL S LV SF+AY  +PT
Sbjct: 12  NNFLRKHRKWPLSSHKTKWHQTFDQDEALRILKQAANPDQPHLLLSALVTSFTAYSCHPT 71

Query: 323 PQSYHLLFKILIQKRPSNRHVQIQEILNHIEKGESFETPECVFIDLIKFYGDTNMFNYAV 144
           P +Y+ + K L   R S  H  I  +L+ ++  E+F+TPE +F+DLIK YG  N    AV
Sbjct: 72  PNAYYFVLKTLA--RTSQFH-HIPPVLHRLQFLENFQTPEYIFVDLIKLYGRMNRIQDAV 128

Query: 143 ELIFRLPRFRCDPXXXXXXXXXXXLCRNKRGFEMVPRVLLKSQVMKI 3
            L  R+P FRC P           L RN +G  ++P ++L S  M I
Sbjct: 129 TLFRRIPMFRCVPSTLSLNSLLSQLSRNAQGLPIIPDIILNSHSMGI 175


>ref|XP_006411054.1| hypothetical protein EUTSA_v10017948mg [Eutrema salsugineum]
           gi|557112223|gb|ESQ52507.1| hypothetical protein
           EUTSA_v10017948mg [Eutrema salsugineum]
          Length = 456

 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 53/169 (31%), Positives = 88/169 (52%), Gaps = 5/169 (2%)
 Frame = -2

Query: 494 YIRKRRKWPIRPYKTQWDQIFAFRLAKQSFKQSI-----RKTKTHLLSDLVNSFSAYEVN 330
           + RK RK P   +KT+W++    + A +  +  +           +L  L++SF  +   
Sbjct: 13  FFRKYRKIPHSSFKTKWNENLKQKYAMEELRSGLIADSGSNENDGVLRTLISSFRLHNCE 72

Query: 329 PTPQSYHLLFKILIQKRPSNRHVQIQEILNHIEKGESFETPECVFIDLIKFYGDTNMFNY 150
           PTPQ+Y  + K L +   +++   I  +LNHIE  E F+TPE +F D+I  YG +     
Sbjct: 73  PTPQAYKFVIKTLAK---TSQLENIASVLNHIEISEKFDTPESIFRDVIFAYGFSGRIEE 129

Query: 149 AVELIFRLPRFRCDPXXXXXXXXXXXLCRNKRGFEMVPRVLLKSQVMKI 3
           A+++ F++P FRC P           L R ++G +MVP VLLK+  + +
Sbjct: 130 AIDVFFKIPNFRCVPSAYTLNALLSVLVRKRQGLKMVPEVLLKASKLGV 178


>ref|XP_006294146.1| hypothetical protein CARUB_v10023139mg [Capsella rubella]
           gi|482562854|gb|EOA27044.1| hypothetical protein
           CARUB_v10023139mg [Capsella rubella]
          Length = 470

 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 51/166 (30%), Positives = 87/166 (52%), Gaps = 2/166 (1%)
 Frame = -2

Query: 494 YIRKRRKWPIRPYKTQWDQIFAFRLAKQSFKQS--IRKTKTHLLSDLVNSFSAYEVNPTP 321
           ++RK RK P  P+KT+W++    + A +  + S         ++  LV+SF  +   PTP
Sbjct: 30  FLRKYRKIPHSPFKTKWNENLKQKYAMEELRSSPVADSEDGGVIRTLVSSFRLHNCEPTP 89

Query: 320 QSYHLLFKILIQKRPSNRHVQIQEILNHIEKGESFETPECVFIDLIKFYGDTNMFNYAVE 141
           Q+Y  + K L +   +++   I  +L+H+E  E F+TPE +F D+I  YG       A++
Sbjct: 90  QAYRFVIKTLAK---TSQLENIASVLSHLEVSEKFDTPESIFRDVIAAYGFAGRIGEAID 146

Query: 140 LIFRLPRFRCDPXXXXXXXXXXXLCRNKRGFEMVPRVLLKSQVMKI 3
           + F++P FRC P           L R +   E+VP +L+K+  M +
Sbjct: 147 VFFKIPNFRCVPSAYTLNALLLVLVRKRESLELVPEILVKASRMGV 192


>ref|NP_181376.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546769|sp|Q8L6Y7.2|PP193_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g38420, mitochondrial; Flags: Precursor
           gi|3395430|gb|AAC28762.1| hypothetical protein
           [Arabidopsis thaliana] gi|330254441|gb|AEC09535.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 453

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 49/161 (30%), Positives = 87/161 (54%), Gaps = 2/161 (1%)
 Frame = -2

Query: 494 YIRKRRKWPIRPYKTQWDQIFAFRLAKQSFKQSIRKTKTH--LLSDLVNSFSAYEVNPTP 321
           ++RK RK P   +KT+W++    + A +  + ++     +  ++  L++SF  +   PTP
Sbjct: 13  FMRKYRKIPHSSFKTKWNENLKQKYAMEELRSNLLTDSENASVMRTLLSSFQLHNCEPTP 72

Query: 320 QSYHLLFKILIQKRPSNRHVQIQEILNHIEKGESFETPECVFIDLIKFYGDTNMFNYAVE 141
           Q+Y  + K L +   S++   I  +L H+E  E F+TPE +F D+I  YG +     A+E
Sbjct: 73  QAYRFVIKTLAK---SSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIE 129

Query: 140 LIFRLPRFRCDPXXXXXXXXXXXLCRNKRGFEMVPRVLLKS 18
           + F++P FRC P           L R ++  E+VP +L+K+
Sbjct: 130 VFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKA 170


>gb|AAM98219.1| unknown protein [Arabidopsis thaliana] gi|31376375|gb|AAP49514.1|
           At2g38420 [Arabidopsis thaliana]
          Length = 444

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 49/161 (30%), Positives = 87/161 (54%), Gaps = 2/161 (1%)
 Frame = -2

Query: 494 YIRKRRKWPIRPYKTQWDQIFAFRLAKQSFKQSIRKTKTH--LLSDLVNSFSAYEVNPTP 321
           ++RK RK P   +KT+W++    + A +  + ++     +  ++  L++SF  +   PTP
Sbjct: 4   FMRKYRKIPHSSFKTKWNENLKQKYAMEELRSNLLTDSENASVMRTLLSSFQLHNCEPTP 63

Query: 320 QSYHLLFKILIQKRPSNRHVQIQEILNHIEKGESFETPECVFIDLIKFYGDTNMFNYAVE 141
           Q+Y  + K L +   S++   I  +L H+E  E F+TPE +F D+I  YG +     A+E
Sbjct: 64  QAYRFVIKTLAK---SSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIE 120

Query: 140 LIFRLPRFRCDPXXXXXXXXXXXLCRNKRGFEMVPRVLLKS 18
           + F++P FRC P           L R ++  E+VP +L+K+
Sbjct: 121 VFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKA 161


>ref|XP_002879744.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325583|gb|EFH56003.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 444

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 48/166 (28%), Positives = 90/166 (54%), Gaps = 2/166 (1%)
 Frame = -2

Query: 494 YIRKRRKWPIRPYKTQWDQIFAFRLAKQSFKQSIRKTKTH--LLSDLVNSFSAYEVNPTP 321
           ++RK RK P   +KT+W++    + A +  + ++     +  ++  LV+SF  +   PTP
Sbjct: 4   FMRKYRKIPQSSFKTKWNENLKQKYAMEELRSNLLADSENGSVMRTLVSSFQLHNCEPTP 63

Query: 320 QSYHLLFKILIQKRPSNRHVQIQEILNHIEKGESFETPECVFIDLIKFYGDTNMFNYAVE 141
           Q+Y  + + L +   +++   I  +L+H+E  E F+TPE +F D+I  YG +     A++
Sbjct: 64  QAYRFVIETLAK---TSQLENIASVLDHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAID 120

Query: 140 LIFRLPRFRCDPXXXXXXXXXXXLCRNKRGFEMVPRVLLKSQVMKI 3
           + F++P FRC P           L R ++  E+VP +L+K+  M +
Sbjct: 121 VFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKASRMGV 166


>emb|CAN63706.1| hypothetical protein VITISV_013107 [Vitis vinifera]
          Length = 390

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 44/126 (34%), Positives = 67/126 (53%), Gaps = 8/126 (6%)
 Frame = -2

Query: 494 YIRKRRKWPIRPYKTQWDQIFAFRLAKQSFKQSIRK--------TKTHLLSDLVNSFSAY 339
           ++RKRRKWP+ PYK  W + F  R A Q+ K +I          + +  LS L++SF  Y
Sbjct: 14  FLRKRRKWPLSPYKATWHETFHHRQAMQTLKNTIANQSPSPQSPSNSQFLSILIDSFRIY 73

Query: 338 EVNPTPQSYHLLFKILIQKRPSNRHVQIQEILNHIEKGESFETPECVFIDLIKFYGDTNM 159
             +PTP +Y  +   L + R  +    +  +L+ +EK E FETPE +F +LIK    +  
Sbjct: 74  NSDPTPNAYRFVISTLTRCRQFH---HLPPLLHRLEKVEKFETPEFIFTNLIKILLKSQA 130

Query: 158 FNYAVE 141
            N  +E
Sbjct: 131 MNIRLE 136