BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00006911
         (1990 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA-...   668   0.0  
dbj|BAA88921.1| sigma factor [Nicotiana tabacum]                      660   0.0  
gb|EOY10268.1| Sigma factor A isoform 1 [Theobroma cacao]             660   0.0  
ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-...   657   0.0  
ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citr...   652   0.0  
ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [...   651   0.0  
gb|EMJ20222.1| hypothetical protein PRUPE_ppa004393mg [Prunus pe...   644   0.0  
ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protei...   635   e-179
dbj|BAA88922.1| sigma factor [Nicotiana tabacum]                      634   e-179
ref|XP_006347341.1| PREDICTED: RNA polymerase sigma factor sigA-...   630   e-178
ref|XP_004307835.1| PREDICTED: RNA polymerase sigma factor sigA-...   626   e-176
ref|XP_004241445.1| PREDICTED: RNA polymerase sigma factor sigA-...   624   e-176
ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-lik...   623   e-175
emb|CBI26421.3| unnamed protein product [Vitis vinifera]              623   e-175
ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor sigA-...   612   e-172
ref|XP_002319237.2| hypothetical protein POPTR_0013s07290g [Popu...   606   e-170
ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-...   605   e-170
ref|XP_006419162.1| hypothetical protein EUTSA_v10002486mg [Eutr...   603   e-170
ref|XP_003534364.1| PREDICTED: RNA polymerase sigma factor sigA-...   597   e-168
gb|EPS67249.1| sigma factor [Genlisea aurea]                          596   e-167

>ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA-like [Solanum
            lycopersicum]
          Length = 509

 Score =  668 bits (1723), Expect = 0.0
 Identities = 349/511 (68%), Positives = 411/511 (80%), Gaps = 11/511 (2%)
 Frame = +3

Query: 252  MIMATAVIGLSTGKRLLLSSTFYYSDLSEKLACTTD---PHHQNASTKNAITAKRSSNF- 419
            M+  TAVIGLS GKRLL SS+FYYSDL+EKL+C++D   P HQ  + KN I+AK+SS++ 
Sbjct: 1    MMATTAVIGLSAGKRLL-SSSFYYSDLNEKLSCSSDHSLPCHQVPTVKNVISAKKSSDYS 59

Query: 420  ---VSNRRSQSIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEISDPEYLVDAILLLQKS 590
               VS+R+ QS++ALKEH VD AS+P  ++ W      L NE   + +  V+ +LLLQKS
Sbjct: 60   PSCVSSRKLQSVKALKEH-VDIASDPSDVQSWFERFEQLQNESDDEEDDSVEVLLLLQKS 118

Query: 591  MLEKQWNLSAETTKTTSRARKK----IQVICSGTSARRRRMDSRKKVIGRKVSNPGQLNT 758
            MLEKQWNLSAE T T S  RKK    + + CSGTSARRRRMDSR++V+ +K S+   ++ 
Sbjct: 119  MLEKQWNLSAEETLTASTQRKKNCKKMHIACSGTSARRRRMDSRQRVLAQK-SSATPISA 177

Query: 759  SKQWRSIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXXXXG 938
            +K  RSI+ P+LLQN LKGYVKG++S+ELLTH +V+QLS+KIK G              G
Sbjct: 178  TKPLRSILGPDLLQNRLKGYVKGIVSEELLTHTEVLQLSKKIKVGLHVEEQKSRLKERLG 237

Query: 939  CEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADXXX 1118
            CEPSD+QLA SL++SRTDLQS +IECSLARE+L+MSN+RLVMSIAQRYDNMGAEMAD   
Sbjct: 238  CEPSDDQLAVSLKMSRTDLQSTLIECSLARERLSMSNVRLVMSIAQRYDNMGAEMADLVQ 297

Query: 1119 XXXXXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA 1298
                      EKFD SKG+KISTYVYWWIRQGVSR LVENSRTLRLPTHLHERLGLIRNA
Sbjct: 298  GGLIGLLRGIEKFDPSKGYKISTYVYWWIRQGVSRTLVENSRTLRLPTHLHERLGLIRNA 357

Query: 1299 KARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLHSYI 1478
            K RLEEKGI PS++ IA +LNMSQKK+RNATEA SKV+SLDRE FPSLNGLPG +LHSYI
Sbjct: 358  KMRLEEKGINPSVNNIAASLNMSQKKVRNATEASSKVYSLDREVFPSLNGLPGTTLHSYI 417

Query: 1479 ADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRRIGL 1658
            ADNH+ENNPWHGVD WALKDEV+ LI+ TLRERER+IIRLYYGLD+ECLTWEDIS+RIGL
Sbjct: 418  ADNHLENNPWHGVDVWALKDEVNNLISSTLREREREIIRLYYGLDSECLTWEDISKRIGL 477

Query: 1659 SRERVRQVGLVALEKLKHAARKRRLDAMLVQ 1751
            SRERVRQVGLVALEKLKHAARKRRLDAML++
Sbjct: 478  SRERVRQVGLVALEKLKHAARKRRLDAMLIK 508


>dbj|BAA88921.1| sigma factor [Nicotiana tabacum]
          Length = 508

 Score =  660 bits (1703), Expect = 0.0
 Identities = 351/511 (68%), Positives = 408/511 (79%), Gaps = 11/511 (2%)
 Frame = +3

Query: 252  MIMATAVIGLSTGKRLLLSSTFYYSDLSEKLACTTD---PHHQNASTKNAITAKRSSNF- 419
            M+   AVIGLS GKRLL SS+FYYSDL+EKL CT+D   P H   S KN ITAK+SS++ 
Sbjct: 1    MMSTAAVIGLSAGKRLL-SSSFYYSDLNEKLTCTSDHSLPCHHVPSIKNVITAKKSSDYS 59

Query: 420  ---VSNRRSQSIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEISDPEYLVDAILLLQKS 590
               VS+R+SQS ++LKEH VD  ++P  +  W      L NE   D +  V+ +LLLQKS
Sbjct: 60   PSCVSSRKSQSAKSLKEH-VDITADPSDVPSWFEMYEQLQNES-DDEDESVEVLLLLQKS 117

Query: 591  MLEKQWNLSAETTKTTS----RARKKIQVICSGTSARRRRMDSRKKVIGRKVSNPGQLNT 758
            MLEKQWNLS E T T S    +  KK+ + CSGTSARRRRMDSR++V+ R  S+    + 
Sbjct: 118  MLEKQWNLSLEQTLTASPQHEKKSKKMHITCSGTSARRRRMDSRQRVLDRH-SSATPTSA 176

Query: 759  SKQWRSIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXXXXG 938
            +K  RSII PELLQN LKGYVKGV+S+ELLTHA+V+QLS+KI+ G              G
Sbjct: 177  AKPLRSIIGPELLQNRLKGYVKGVVSEELLTHAEVLQLSKKIQVGLYLEEQKSRLKERLG 236

Query: 939  CEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADXXX 1118
            CEPSD+QLA SL++SRTDLQS +IECSLARE+LAMSN+RLVMSIAQRYDN+GAEMAD   
Sbjct: 237  CEPSDDQLAVSLKMSRTDLQSTLIECSLARERLAMSNVRLVMSIAQRYDNVGAEMADLVQ 296

Query: 1119 XXXXXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA 1298
                      EKFD SKG+KISTYVYWWIRQGVSRALVENSRTLRLPT+LHERL LIRNA
Sbjct: 297  GGLIGLLRGIEKFDPSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLSLIRNA 356

Query: 1299 KARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLHSYI 1478
            KARLEEKGITPS++ IA +LNMSQKK+RNATEA SK++SLDREAFPSLNGLPGE+LHSYI
Sbjct: 357  KARLEEKGITPSVNNIAASLNMSQKKVRNATEASSKMYSLDREAFPSLNGLPGETLHSYI 416

Query: 1479 ADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRRIGL 1658
            ADNH+ENNPWHGVD WALKDEV+ LI+ TLR+RER+IIRLYYGLDNECLTWEDIS+RIGL
Sbjct: 417  ADNHLENNPWHGVDVWALKDEVNNLISSTLRDREREIIRLYYGLDNECLTWEDISKRIGL 476

Query: 1659 SRERVRQVGLVALEKLKHAARKRRLDAMLVQ 1751
            SRERVRQVGLVALEKLKHAARKR+LDAML++
Sbjct: 477  SRERVRQVGLVALEKLKHAARKRQLDAMLIK 507


>gb|EOY10268.1| Sigma factor A isoform 1 [Theobroma cacao]
          Length = 508

 Score =  660 bits (1703), Expect = 0.0
 Identities = 356/515 (69%), Positives = 414/515 (80%), Gaps = 14/515 (2%)
 Frame = +3

Query: 252  MIMATAVIGLSTGKRLLLSSTFYYSDLSEKLACTTD---PHHQNASTKNAITAKRSSNFV 422
            M+   AVIGL+TGKRLL SS+F YSD+ EKL+   D    HHQ +STK+ I AK+SSN  
Sbjct: 1    MMATAAVIGLTTGKRLL-SSSFSYSDIIEKLSYANDYGSSHHQTSSTKSLIVAKKSSNCS 59

Query: 423  -----SNRRSQSIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEISDPEYLVDAILLLQK 587
                 SNRR+QSI+ALKEH VD+AS   T EP L  GS+ L  E  D +Y V+A+LLLQK
Sbjct: 60   QSLPSSNRRAQSIKALKEH-VDSASIVSTAEP-LFQGSNDLEVESYDLDYSVEALLLLQK 117

Query: 588  SMLEKQWNLSAETTKTTS----RARKKIQVICSGTSARRRRMDSRKKVI--GRKVSNPGQ 749
            SMLEKQW LS E T  T     +  KKI V CSG SAR+RR ++++K++   + +  P  
Sbjct: 118  SMLEKQWTLSFERTVFTESPSRKIHKKIPVTCSGVSARQRRFNTKRKILIQNKSIIQPN- 176

Query: 750  LNTSKQWRSIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXX 929
               +KQ RS+ISPELLQ+ LKGYVKGV+SDELL+HA+VV+LS+KIKAG            
Sbjct: 177  ---AKQLRSLISPELLQSRLKGYVKGVVSDELLSHAEVVRLSKKIKAGLSLEEHRLRLKE 233

Query: 930  XXGCEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMAD 1109
              GCEPSDEQLATSL+ISR +L+SK+IECSLAREKLAMSN+RLVMSIAQRYDNMGAEM+D
Sbjct: 234  RLGCEPSDEQLATSLKISRAELRSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSD 293

Query: 1110 XXXXXXXXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI 1289
                         EKFDSSKG+KISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI
Sbjct: 294  LIQGGLIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI 353

Query: 1290 RNAKARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLH 1469
            RNAK RLEEKGITP+ID+IAE+LNMSQKK+RNATEA+SKVFSLDR+AFPSLNGLPGE+ H
Sbjct: 354  RNAKIRLEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHH 413

Query: 1470 SYIADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRR 1649
            SYIADNH+EN PWHGVDEWALKDEV++LIT+TL ERER+IIRLYYGLD E LTWEDIS+R
Sbjct: 414  SYIADNHVENIPWHGVDEWALKDEVNRLITITLGEREREIIRLYYGLDKESLTWEDISKR 473

Query: 1650 IGLSRERVRQVGLVALEKLKHAARKRRLDAMLVQH 1754
            IGLSRERVRQVGLVALEKLKHAARK++++AMLV+H
Sbjct: 474  IGLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Citrus
            sinensis] gi|568862456|ref|XP_006484699.1| PREDICTED: RNA
            polymerase sigma factor sigA-like isoform X2 [Citrus
            sinensis] gi|568862458|ref|XP_006484700.1| PREDICTED: RNA
            polymerase sigma factor sigA-like isoform X3 [Citrus
            sinensis]
          Length = 508

 Score =  657 bits (1695), Expect = 0.0
 Identities = 353/513 (68%), Positives = 408/513 (79%), Gaps = 12/513 (2%)
 Frame = +3

Query: 252  MIMATAVIGLSTGKRLLLSSTFYYSDLSEKLACTTD---PHHQNASTKNAITAKRSSNF- 419
            M+   AVIGLS GKRLL SS+FYYSD+SEK +   D    + Q  STKN + AK+SSN+ 
Sbjct: 1    MMATAAVIGLSAGKRLL-SSSFYYSDISEKFSYINDLGSANSQVGSTKNVVAAKKSSNYN 59

Query: 420  ----VSNRRSQSIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEISDPEYLVDAILLLQK 587
                 SNR++Q I+ALKEH VDT +   T EPW    +S+  EE S+ +Y V+A+LLLQK
Sbjct: 60   PSFPSSNRQTQPIKALKEH-VDT-NFASTAEPWAEPPNSI-EEESSELDYSVEALLLLQK 116

Query: 588  SMLEKQWNLSAETTKTTS----RARKKIQVICSGTSARRRRMDSRKKVIGRKVSNPGQLN 755
            SMLEKQWNLS E T  T     +  KK+ V CSG SAR+RR++S+KK++ +  S P Q N
Sbjct: 117  SMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVPQQ-N 175

Query: 756  TSKQWRSIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXXXX 935
             SKQ RS+ISPEL+QN LKGYVKGV+S+ELLTHA+VV+LS+KIK G              
Sbjct: 176  GSKQLRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERL 235

Query: 936  GCEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADXX 1115
            GCEPS EQLA SLRISR +LQS ++ECSLAREKL MSN+RLVMSIAQRYDNMGA+MAD  
Sbjct: 236  GCEPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLV 295

Query: 1116 XXXXXXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRN 1295
                       EKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP HLHERLGLIRN
Sbjct: 296  QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRN 355

Query: 1296 AKARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLHSY 1475
            AK RLEEKG+TPS+D+IAE LNMSQKK+RNATEAI KVFSLDREAFPSLNGLPGE+ HSY
Sbjct: 356  AKLRLEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSY 415

Query: 1476 IADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRRIG 1655
            IADN +ENNPWHGVD+WALKDEV+KLI +TL ERER+IIRLYYGLD ECLTWEDIS+RIG
Sbjct: 416  IADNRVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIG 475

Query: 1656 LSRERVRQVGLVALEKLKHAARKRRLDAMLVQH 1754
            LSRERVRQVGLVALEKLKHAARK++++AMLV+H
Sbjct: 476  LSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citrus clementina]
            gi|557539599|gb|ESR50643.1| hypothetical protein
            CICLE_v10031289mg [Citrus clementina]
          Length = 508

 Score =  652 bits (1682), Expect = 0.0
 Identities = 351/513 (68%), Positives = 407/513 (79%), Gaps = 12/513 (2%)
 Frame = +3

Query: 252  MIMATAVIGLSTGKRLLLSSTFYYSDLSEKLACTTD---PHHQNASTKNAITAKRSSNF- 419
            M+   AVIGLS GKRLL SS+FYYSD+SEK +   D    + Q  STKN + AK+SSN+ 
Sbjct: 1    MMATAAVIGLSAGKRLL-SSSFYYSDISEKFSYINDLGSANSQVGSTKNVVAAKKSSNYN 59

Query: 420  ----VSNRRSQSIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEISDPEYLVDAILLLQK 587
                 SNR++Q I+ALKEH VDT +   T EPW    +S+  EE S+ +Y V+A+LLLQK
Sbjct: 60   PSFPSSNRQTQPIKALKEH-VDT-NFASTAEPWAEPPNSI-EEESSELDYSVEALLLLQK 116

Query: 588  SMLEKQWNLSAETTKTTS----RARKKIQVICSGTSARRRRMDSRKKVIGRKVSNPGQLN 755
            SMLEKQWNLS E T  T     +  KK+ V CSG SAR+RR++S+KK++ +  S   Q N
Sbjct: 117  SMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVLQQ-N 175

Query: 756  TSKQWRSIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXXXX 935
             SKQ RS+ISPEL+QN LKGYVKGV+S+ELLTHA+VV+LS+KIK G              
Sbjct: 176  GSKQLRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERL 235

Query: 936  GCEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADXX 1115
            GCEPS EQLA SLRISR +LQS ++ECSLAREKL MSN+RLVMSIAQRYDNMGA+MAD  
Sbjct: 236  GCEPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLI 295

Query: 1116 XXXXXXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRN 1295
                       EKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP HLHERLGLIRN
Sbjct: 296  QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRN 355

Query: 1296 AKARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLHSY 1475
            AK RLEEKG+TP++D+IAE LNMSQKK+RNATEAI KVFSLDREAFPSLNGLPGE+ HSY
Sbjct: 356  AKLRLEEKGVTPAVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSY 415

Query: 1476 IADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRRIG 1655
            IADN +ENNPWHGVD+WALKDEV+KLI +TL ERER+IIRLYYGLD ECLTWEDIS+RIG
Sbjct: 416  IADNRVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIG 475

Query: 1656 LSRERVRQVGLVALEKLKHAARKRRLDAMLVQH 1754
            LSRERVRQVGLVALEKLKHAARK++++AMLV+H
Sbjct: 476  LSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 508

 Score =  651 bits (1680), Expect = 0.0
 Identities = 354/512 (69%), Positives = 410/512 (80%), Gaps = 13/512 (2%)
 Frame = +3

Query: 258  MATA-VIGLSTGKRLLLSSTFYYSDLSEKLACTTD---PHHQNASTKNAITAKRSSNF-- 419
            MATA VIGLS GKRLL SSTFYYSDL+EKL+   +    H+Q  STK  I AK+SSN+  
Sbjct: 1    MATAAVIGLSAGKRLL-SSTFYYSDLTEKLSSANEHGLTHYQITSTKTLIVAKKSSNYGP 59

Query: 420  ---VSNRRSQSIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEISDPEYLVDAILLLQKS 590
                SNR +QSI+ALKEH VDTAS P T        + +  EE SD +Y V+A+LLLQKS
Sbjct: 60   SFPSSNRNTQSIKALKEH-VDTASAPSTAATQFKTFNDM-EEESSDLDYSVEALLLLQKS 117

Query: 591  MLEKQWNLSAETTKTTS----RARKKIQVICSGTSARRRRMDSRKKVIGRKVSNPGQLNT 758
            MLEKQWNLS E T ++     +++KKI V CSG SAR+RR++ R+K + +      Q N 
Sbjct: 118  MLEKQWNLSFERTDSSDSPSRKSQKKIPVTCSGVSARQRRINIRRKNLSQSKFTV-QANV 176

Query: 759  SKQWRSIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXXXXG 938
             KQ +S +SPELLQN LKGYVKGV+S+ELL+HA+VV+LS+ IKAG              G
Sbjct: 177  FKQLKSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLEDHKSRLKERLG 236

Query: 939  CEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADXXX 1118
            C+PSDEQ+ATSL+ISR +LQSK I CSLAREKLAMSN+RLVMSIAQRYDNMGAEMAD   
Sbjct: 237  CDPSDEQVATSLKISRAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQ 296

Query: 1119 XXXXXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA 1298
                      EKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLP HLHERLGLIRNA
Sbjct: 297  GGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNA 356

Query: 1299 KARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLHSYI 1478
            K RLEEKG+TPSID+IAE+LN+SQKK+RNATEA+SKVFSLDREAFPSLNGLPGE+ HSYI
Sbjct: 357  KIRLEEKGVTPSIDRIAESLNISQKKVRNATEAVSKVFSLDREAFPSLNGLPGETHHSYI 416

Query: 1479 ADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRRIGL 1658
            ADN +ENNPWHGVD+WALKDEV+KLI LTL+ERE++IIRLYYGLDNE LTWEDIS+RIGL
Sbjct: 417  ADNCLENNPWHGVDDWALKDEVNKLINLTLQEREQEIIRLYYGLDNESLTWEDISKRIGL 476

Query: 1659 SRERVRQVGLVALEKLKHAARKRRLDAMLVQH 1754
            SRERVRQVGLVALEKLKHAARK++L+AMLV+H
Sbjct: 477  SRERVRQVGLVALEKLKHAARKKKLEAMLVKH 508


>gb|EMJ20222.1| hypothetical protein PRUPE_ppa004393mg [Prunus persica]
          Length = 512

 Score =  644 bits (1660), Expect = 0.0
 Identities = 352/517 (68%), Positives = 400/517 (77%), Gaps = 16/517 (3%)
 Frame = +3

Query: 252  MIMATAVIGLSTGKRLLLSSTFYYSDLSEKLACTTDPHH----QNASTKNAITAKRSSNF 419
            M+   AVIGLSTGKRLL +S+FYYSD++EKL    D H       +STKN +TA++ SN 
Sbjct: 1    MMATAAVIGLSTGKRLL-NSSFYYSDITEKLFHLNDHHGFLHCHFSSTKNVVTARKPSNC 59

Query: 420  VS-----NRRSQSIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEISDPEYLVDAILLLQ 584
             S     NR  QSIRALKEH V TAS P +         + L EE SD EY V+A+LLLQ
Sbjct: 60   SSRFPSSNRPQQSIRALKEH-VQTASAPSSATQQWFQELNDLEEESSDLEYSVEALLLLQ 118

Query: 585  KSMLEKQWNLSAE-------TTKTTSRARKKIQVICSGTSARRRRMDSRKKVIGRKVSNP 743
            KSMLEKQWNLS E       T+KTT    KKI V CSG SAR+RRM S K+    K +  
Sbjct: 119  KSMLEKQWNLSFEKKVLRDSTSKTTD---KKIPVTCSGVSARQRRMTSTKRKTFNKSTCV 175

Query: 744  GQLNTSKQWRSIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXX 923
               +T+K  R+I+SPELLQN +KGYVKGV+S++LLTH +VV+LS+KIK G          
Sbjct: 176  MHPSTNKPLRAIVSPELLQNHVKGYVKGVLSEDLLTHTEVVRLSKKIKVGLSVEEHKSRL 235

Query: 924  XXXXGCEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEM 1103
                GCEPSDEQLATSLRISR  LQSK+IEC LAREKLAMSN+RLVMSIAQRYDNMGAEM
Sbjct: 236  KERLGCEPSDEQLATSLRISRAQLQSKLIECKLAREKLAMSNVRLVMSIAQRYDNMGAEM 295

Query: 1104 ADXXXXXXXXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLG 1283
            AD             EKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLG
Sbjct: 296  ADLIQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLG 355

Query: 1284 LIRNAKARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGES 1463
            LIRNAK RLEEKGITPSID+IAE+LNMS+KK+RNATEAISKVFSLDR+AFPSLNGLPGE+
Sbjct: 356  LIRNAKIRLEEKGITPSIDRIAESLNMSKKKVRNATEAISKVFSLDRDAFPSLNGLPGET 415

Query: 1464 LHSYIADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDIS 1643
             HSYIADN +EN PWHGVD WALK+EV KLI + L ERE++II+LYYGL+NECLTWEDIS
Sbjct: 416  HHSYIADNRLENIPWHGVDAWALKEEVSKLINMMLGEREKEIIQLYYGLENECLTWEDIS 475

Query: 1644 RRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLVQH 1754
            +RIGLSRERVRQVGLVALEKLKHAARKR ++AML++H
Sbjct: 476  KRIGLSRERVRQVGLVALEKLKHAARKREMEAMLLKH 512


>ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protein [Populus trichocarpa]
            gi|222862757|gb|EEF00264.1| RNA POLYMERASE SIGMA SUBUNIT
            1 family protein [Populus trichocarpa]
          Length = 509

 Score =  635 bits (1639), Expect = e-179
 Identities = 345/513 (67%), Positives = 399/513 (77%), Gaps = 12/513 (2%)
 Frame = +3

Query: 252  MIMATAVIGLSTGKRLLLSSTFYYSDLSEKLACTTD---PHHQNASTKNAITAKRSSNF- 419
            M+   AVIGLS+GKRLL SS+FYYSDL+EKL+   D    ++  A+TKN I AK+SSN+ 
Sbjct: 1    MMATAAVIGLSSGKRLL-SSSFYYSDLTEKLSNVNDHGITYYPTATTKNVIVAKKSSNYG 59

Query: 420  ----VSNRRSQSIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEISDPEYLVDAILLLQK 587
                 SNR S SI+ALKEH VDTAS    +  W         EE S  +Y V+A+LLLQK
Sbjct: 60   PSFPSSNRNSHSIKALKEH-VDTASASSNVATWFKTFDDF-EEESSALDYSVEALLLLQK 117

Query: 588  SMLEKQWNLSAETTK----TTSRARKKIQVICSGTSARRRRMDSRKKVIGRKVSNPGQLN 755
            SMLEKQWNLS E T     T+ +  KKI V CSG SAR+RR+++R+K   +      Q +
Sbjct: 118  SMLEKQWNLSFERTNSSDSTSKKNNKKIPVTCSGVSARQRRVNNRRKNQNQS-KFMSQSS 176

Query: 756  TSKQWRSIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXXXX 935
              K  RS+ SP+LLQN LKGYVKGV+SDE+L H +VV+LS+ I+AG              
Sbjct: 177  DFKFLRSVSSPDLLQNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKSRLKERL 236

Query: 936  GCEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADXX 1115
            GCEPSDEQ+A SLRISR DLQSK+I+CSLAREKLAMSN+RLVMSIAQ+YDNMGAEMAD  
Sbjct: 237  GCEPSDEQIADSLRISRADLQSKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGAEMADLV 296

Query: 1116 XXXXXXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRN 1295
                       EKFDSSKGFKISTYVYWWIRQGVSRALV+NSRTLRLP HLHERLGLIRN
Sbjct: 297  QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLIRN 356

Query: 1296 AKARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLHSY 1475
            AK RLEEKG+TPSID+IAE+LNMSQ+K+RNATEAISKVFSLDREAFPSLNGLPGE+ HSY
Sbjct: 357  AKIRLEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSY 416

Query: 1476 IADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRRIG 1655
            IADN  ENNPWHGVDEWALK+EV+KLI  TL+ERE++IIRLY+GLD ECLTWEDIS+R+G
Sbjct: 417  IADNRPENNPWHGVDEWALKEEVNKLIDSTLQEREKEIIRLYHGLDQECLTWEDISKRMG 476

Query: 1656 LSRERVRQVGLVALEKLKHAARKRRLDAMLVQH 1754
            LSRERVRQVGLVALEKLKHAARKR  +AMLV+H
Sbjct: 477  LSRERVRQVGLVALEKLKHAARKRNTEAMLVKH 509


>dbj|BAA88922.1| sigma factor [Nicotiana tabacum]
          Length = 502

 Score =  634 bits (1634), Expect = e-179
 Identities = 346/505 (68%), Positives = 391/505 (77%), Gaps = 9/505 (1%)
 Frame = +3

Query: 267  AVIGLSTGKRLLLSSTFYYSDLSEKLACTTD---PHHQNASTKNAITAKRSSNF----VS 425
            A+IGLS G R+L SS+FYYS L+EK  C +D   P H   S KN I AK SSN+    VS
Sbjct: 3    AIIGLSAGNRIL-SSSFYYSVLTEKF-CVSDHALPCHHFPSPKNVINAKNSSNYSPSYVS 60

Query: 426  NRRSQSIRALKEHHVDTASN-PCTLEPWLIHGSSLLNEEISDPEYLVDAILLLQKSMLEK 602
            NR+ QS++ALKEH VD ASN     EPW+     L N   S+ E  V+ +LLLQKSMLEK
Sbjct: 61   NRKKQSVKALKEH-VDIASNRDSDTEPWVQMFKQLQNGSCSE-EDSVEVLLLLQKSMLEK 118

Query: 603  QWNLSAETTKTT-SRARKKIQVICSGTSARRRRMDSRKKVIGRKVSNPGQLNTSKQWRSI 779
            QWNLSAE   T  +  +KK+Q+ CSGTSARRRRMD+RK+ +  K S     ++SK+ RS+
Sbjct: 119  QWNLSAEKAMTNENNCKKKMQITCSGTSARRRRMDTRKRDLLPKNSATSD-SSSKRLRSV 177

Query: 780  ISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXXXXGCEPSDEQ 959
            I PELLQN  KGY+ GV+  ELLTH +VVQLS+KIK G              GCEPSD+Q
Sbjct: 178  IGPELLQNRSKGYINGVVGQELLTHTEVVQLSKKIKFGLYLEEQKSRLKERLGCEPSDDQ 237

Query: 960  LATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADXXXXXXXXXX 1139
            LA SL+ISR DL+S +IECSLAREKLAMSN+RLVMSIAQRYD  G EMAD          
Sbjct: 238  LAISLKISRADLRSTLIECSLAREKLAMSNVRLVMSIAQRYDTNGTEMADLIQGGLIGLL 297

Query: 1140 XXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKARLEEK 1319
               EKFD S+GFKISTYVYWWIRQGVSRALVENSRTLRLP HLHERL LIRNAK +L+E 
Sbjct: 298  RGIEKFDHSRGFKISTYVYWWIRQGVSRALVENSRTLRLPIHLHERLSLIRNAKIKLKEN 357

Query: 1320 GITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLHSYIADNHIEN 1499
            GITPSI+KIAE LNMSQKK+RNATEA SKVFSLDREAFPSLNGLPGE+LHSYIADN +EN
Sbjct: 358  GITPSIEKIAECLNMSQKKVRNATEASSKVFSLDREAFPSLNGLPGETLHSYIADNRLEN 417

Query: 1500 NPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRRIGLSRERVRQ 1679
             PWHGVDEW LKDEV+ LI+ TLRERER+I+RLYYGLDNECLTWEDISRRIGLSRERVRQ
Sbjct: 418  IPWHGVDEWMLKDEVNNLISSTLREREREIVRLYYGLDNECLTWEDISRRIGLSRERVRQ 477

Query: 1680 VGLVALEKLKHAARKRRLDAMLVQH 1754
            VGLVALEKLKHAARKRRLDAMLV+H
Sbjct: 478  VGLVALEKLKHAARKRRLDAMLVKH 502


>ref|XP_006347341.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Solanum
            tuberosum] gi|565361192|ref|XP_006347342.1| PREDICTED:
            RNA polymerase sigma factor sigA-like isoform X2 [Solanum
            tuberosum]
          Length = 505

 Score =  630 bits (1626), Expect = e-178
 Identities = 338/505 (66%), Positives = 393/505 (77%), Gaps = 9/505 (1%)
 Frame = +3

Query: 267  AVIGLSTGKRLLLSSTFYYSDLSEKLACTTDPHHQNASTKNAITAKRSSNF----VSNRR 434
            AVIGL  G R+L SS+FYYSDL+EKLAC+ D       T N I AK+SSN+    VSNR+
Sbjct: 5    AVIGLYAGNRIL-SSSFYYSDLTEKLACSGDHALICNPTWNVINAKKSSNYSTGYVSNRK 63

Query: 435  SQSIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEISDPEYLVDAILLLQKSMLEKQWNL 614
             QS++A+KEH V+ ASN   +EP +     L NE  S+ E  V+ +LLLQKSMLEKQWNL
Sbjct: 64   KQSVKAVKEH-VNIASNHSDVEPMVEMFKKLQNESFSE-EDSVEVLLLLQKSMLEKQWNL 121

Query: 615  SAETTKTT-----SRARKKIQVICSGTSARRRRMDSRKKVIGRKVSNPGQLNTSKQWRSI 779
            SAE T           +KK+Q+ CSGTSARRRRMD+RK+V   K S     + SK+ RS+
Sbjct: 122  SAEKTLAAFPPNEKNCKKKMQITCSGTSARRRRMDTRKRVQIPKTSAAAN-SASKRLRSV 180

Query: 780  ISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXXXXGCEPSDEQ 959
            + PEL QN L+GY+KGV++ ELLTH +VVQLS+KIK G              GCEPSD+Q
Sbjct: 181  VGPELQQNRLRGYMKGVVNQELLTHKEVVQLSKKIKFGLYLEEQKASLKERLGCEPSDDQ 240

Query: 960  LATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADXXXXXXXXXX 1139
            LA SL++S  DL+S ++ECSLAREKLAMSN+RLVMSIAQRYD+MG EMAD          
Sbjct: 241  LAVSLKMSLADLRSTLMECSLAREKLAMSNVRLVMSIAQRYDSMGTEMADLIQGGLIGLL 300

Query: 1140 XXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKARLEEK 1319
               EKFD S+GFKISTYVYWWIRQGVSRALV+NSRTLRLP HLHERL LIRNAK +L++ 
Sbjct: 301  RGIEKFDHSRGFKISTYVYWWIRQGVSRALVDNSRTLRLPIHLHERLSLIRNAKVKLKDN 360

Query: 1320 GITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLHSYIADNHIEN 1499
            GITPSI+KIAE LNMSQKK+RNATEA SKVFSLDREA+PSLNGLPG +LHSYIADN +EN
Sbjct: 361  GITPSIEKIAECLNMSQKKVRNATEASSKVFSLDREAYPSLNGLPGATLHSYIADNRLEN 420

Query: 1500 NPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRRIGLSRERVRQ 1679
            NPWHGVD WALKDEV+ LI+ TLRERERDI+RLYYGLDNECLTWEDISRRIGLSRERVRQ
Sbjct: 421  NPWHGVDGWALKDEVNNLISSTLRERERDIVRLYYGLDNECLTWEDISRRIGLSRERVRQ 480

Query: 1680 VGLVALEKLKHAARKRRLDAMLVQH 1754
            VGLVALEKLKHAARK++LDAMLV+H
Sbjct: 481  VGLVALEKLKHAARKKQLDAMLVKH 505


>ref|XP_004307835.1| PREDICTED: RNA polymerase sigma factor sigA-like [Fragaria vesca
            subsp. vesca]
          Length = 511

 Score =  626 bits (1614), Expect = e-176
 Identities = 343/513 (66%), Positives = 391/513 (76%), Gaps = 12/513 (2%)
 Frame = +3

Query: 252  MIMATAVIGLSTGKRLLLSSTFYYSDLSEKLACTTDPHHQN---ASTKNAITAKRSSNFV 422
            M  A AV+GLS+  + LLSS+  YSD+++KL    D    N   +STKN +TA++SS+  
Sbjct: 1    MATAAAVVGLSSTGKRLLSSSLSYSDITDKLFYLNDHGFVNCQLSSTKNVVTARKSSSKY 60

Query: 423  SNRR--------SQSIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEISDPEYLVDAILL 578
            SN R         QSIRAL+EH  DTAS P +    L+   + L EE SD EY V+A+LL
Sbjct: 61   SNSRFPSSNRHHEQSIRALQEH-ADTASAPSSTTHQLLEEYTDLEEESSDLEYSVEALLL 119

Query: 579  LQKSMLEKQWNLSAETTKTTSRAR-KKIQVICSGTSARRRRMDSRKKVIGRKVSNPGQLN 755
            LQKS+LEKQWNLS E   +T +    KI V CSG SAR+RRM +++K   +  S   Q +
Sbjct: 120  LQKSLLEKQWNLSFEKKLSTRKITDNKIPVTCSGVSARQRRMSTKRKAFSKNTSEL-QPS 178

Query: 756  TSKQWRSIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXXXX 935
            T+K  R+ ISP LLQN   GYVKGV SD LLTH +VV+LS+KIK G              
Sbjct: 179  TNKYCRATISPSLLQNRTSGYVKGVTSDHLLTHTEVVRLSKKIKIGLSVEEHKSRLKEKL 238

Query: 936  GCEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADXX 1115
            GCEPS EQLATSLRISRT+LQSK+I+CSLAREKL MSN+RLVMSIAQRYDNMGAEMAD  
Sbjct: 239  GCEPSVEQLATSLRISRTELQSKLIQCSLAREKLTMSNVRLVMSIAQRYDNMGAEMADLI 298

Query: 1116 XXXXXXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRN 1295
                       EKFD+SKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRN
Sbjct: 299  QGGLIGLLRGIEKFDASKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRN 358

Query: 1296 AKARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLHSY 1475
            AK RLEEKGITPSID IAE+LNMS+KK+RNATEAISKVFSLDR+AFPSLNGLPGE+ HSY
Sbjct: 359  AKVRLEEKGITPSIDSIAESLNMSKKKVRNATEAISKVFSLDRDAFPSLNGLPGETHHSY 418

Query: 1476 IADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRRIG 1655
            IADN  EN PWHG+DE ALKDEV+KLI L L ERER+IIRLYYGLDNECLTWEDIS+RIG
Sbjct: 419  IADNRHENIPWHGLDELALKDEVNKLINLMLGEREREIIRLYYGLDNECLTWEDISKRIG 478

Query: 1656 LSRERVRQVGLVALEKLKHAARKRRLDAMLVQH 1754
            LSRERVRQVGLVALEKLKH ARK+ L+AMLVQH
Sbjct: 479  LSRERVRQVGLVALEKLKHGARKKELEAMLVQH 511


>ref|XP_004241445.1| PREDICTED: RNA polymerase sigma factor sigA-like [Solanum
            lycopersicum]
          Length = 505

 Score =  624 bits (1608), Expect = e-176
 Identities = 336/505 (66%), Positives = 390/505 (77%), Gaps = 9/505 (1%)
 Frame = +3

Query: 267  AVIGLSTGKRLLLSSTFYYSDLSEKLACTTDPHHQNASTKNAITAKRSSNF----VSNRR 434
            AVIG   G R+L SS+FYYSDL+EKLAC+ D       T+N I AK+SSN+    VSNR+
Sbjct: 5    AVIGPYAGNRIL-SSSFYYSDLTEKLACSGDHALICNPTRNVINAKKSSNYSAGYVSNRK 63

Query: 435  SQSIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEISDPEYLVDAILLLQKSMLEKQWNL 614
             QS++A+KEH V+ ASN   +EP +     L NE  S  E  V+ +LLLQKSMLEKQWNL
Sbjct: 64   KQSVKAVKEH-VNIASNHSDVEPMVEMLKKLQNESCSK-EDPVEVLLLLQKSMLEKQWNL 121

Query: 615  SAETT-----KTTSRARKKIQVICSGTSARRRRMDSRKKVIGRKVSNPGQLNTSKQWRSI 779
            SAE T           +KK+Q+ CSGTSARRRRMD+RK+V   K S     + SK+ RS+
Sbjct: 122  SAEKTLEAFPPNEKNCKKKMQITCSGTSARRRRMDTRKRVQIPKASAEAN-SASKRLRSV 180

Query: 780  ISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXXXXGCEPSDEQ 959
            + PEL QN L+GY+ GV++ ELLTH +VVQLS+KIK G              GCEPSD+Q
Sbjct: 181  VGPELQQNRLRGYMNGVVNQELLTHKEVVQLSKKIKFGLYLEEQKASLKERLGCEPSDDQ 240

Query: 960  LATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADXXXXXXXXXX 1139
            LA SL++S  DL+S ++ECSLAREKLAMSN+RLVMSIAQRYD+MG EMAD          
Sbjct: 241  LAVSLKMSLADLRSTLMECSLAREKLAMSNVRLVMSIAQRYDSMGTEMADLIQGGLIGLL 300

Query: 1140 XXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKARLEEK 1319
               EKFD S+GFKISTYVYWWIRQGVSRALV+NSRTLRLP HLHERL LIRNAK +L++ 
Sbjct: 301  RGIEKFDHSRGFKISTYVYWWIRQGVSRALVDNSRTLRLPIHLHERLSLIRNAKVKLKDS 360

Query: 1320 GITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLHSYIADNHIEN 1499
            GITPSI+KIAE LNMSQKK+RNATEA SKVFSLDREA+PSLNGLPG +LHSYIADN +EN
Sbjct: 361  GITPSIEKIAECLNMSQKKVRNATEASSKVFSLDREAYPSLNGLPGATLHSYIADNRLEN 420

Query: 1500 NPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRRIGLSRERVRQ 1679
            NPWHGVD WALKDEV+ LI+  LRERERDIIRLYYGLDNECLTWEDISRRIGLSRERVRQ
Sbjct: 421  NPWHGVDGWALKDEVNNLISSILRERERDIIRLYYGLDNECLTWEDISRRIGLSRERVRQ 480

Query: 1680 VGLVALEKLKHAARKRRLDAMLVQH 1754
            VGLVALEKLKHAARK++LDAMLV+H
Sbjct: 481  VGLVALEKLKHAARKKQLDAMLVKH 505


>ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-like isoform 2 [Vitis
            vinifera]
          Length = 497

 Score =  623 bits (1606), Expect = e-175
 Identities = 344/514 (66%), Positives = 393/514 (76%), Gaps = 13/514 (2%)
 Frame = +3

Query: 252  MIMATAVIGLSTGKRLLLSSTFYYSDLSEKLACTTD----PHHQNASTKNAITAKRSSNF 419
            M+   AVIGLS G RLL SS  +YSD++EKL+   +    PHH +   KN I+AK+ SN+
Sbjct: 1    MMGTAAVIGLSAGNRLLASS-HHYSDVAEKLSSYVNDVGFPHHPSPPPKNLISAKKPSNY 59

Query: 420  V--SNRRSQSIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEISDPEYLVDAILLLQKSM 593
               SNR  QS++ALKEH V++AS P T +P L   SS    E+ D EYLV+A LLLQKSM
Sbjct: 60   TPSSNRSIQSMKALKEH-VESASAPSTADPDLSSSSS----EVEDEEYLVEAFLLLQKSM 114

Query: 594  LEKQWNLSAETTKTTSRA-------RKKIQVICSGTSARRRRMDSRKKVIGRKVSNPGQL 752
            LEKQWNLS E  +            +K+ +V CSGTSAR+RR+  RK+V+  K       
Sbjct: 115  LEKQWNLSFEEEEEEEEEDMGKKARQKRREVTCSGTSARQRRISGRKRVMNEK------- 167

Query: 753  NTSKQWRSIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXXX 932
             +  + R+ +  E   N LKGYVKGV+S+ELLTHAQVV LS KIKAG             
Sbjct: 168  -SKSRVRAALGVE---NRLKGYVKGVVSEELLTHAQVVLLSNKIKAGLLLEDHKSRLKER 223

Query: 933  XGCEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADX 1112
             G EP+DEQ+A SLR+SR +LQSK+IECSLAREKLAMSN+RLVMSIAQRYDNMGAEMAD 
Sbjct: 224  IGSEPTDEQVAASLRMSRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADL 283

Query: 1113 XXXXXXXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR 1292
                        EKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP+HLHERL LIR
Sbjct: 284  VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPSHLHERLSLIR 343

Query: 1293 NAKARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLHS 1472
            NAK RLEEKGITPSID+IAE LNMSQKK+RNATEAISKVFSLDREAFPSLNGLPGE+LHS
Sbjct: 344  NAKIRLEEKGITPSIDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHS 403

Query: 1473 YIADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRRI 1652
            YIAD  +ENNPWHGVDEWALKDEV+KLI  TL ERERDIIRLYYGLDNECLTWEDIS+RI
Sbjct: 404  YIADVRLENNPWHGVDEWALKDEVNKLINTTLGERERDIIRLYYGLDNECLTWEDISKRI 463

Query: 1653 GLSRERVRQVGLVALEKLKHAARKRRLDAMLVQH 1754
            GLSRERVRQVGLVALEKLK+AARK R++AMLV++
Sbjct: 464  GLSRERVRQVGLVALEKLKNAARKGRMEAMLVKY 497


>emb|CBI26421.3| unnamed protein product [Vitis vinifera]
          Length = 555

 Score =  623 bits (1606), Expect = e-175
 Identities = 343/507 (67%), Positives = 392/507 (77%), Gaps = 6/507 (1%)
 Frame = +3

Query: 252  MIMATAVIGLSTGKRLLLSSTFYYSDLSEKLACTTD----PHHQNASTKNAITAKRSSNF 419
            M+   AVIGLS G RLL SS  +YSD++EKL+   +    PHH +   KN I+AK+ SN+
Sbjct: 72   MMGTAAVIGLSAGNRLLASS-HHYSDVAEKLSSYVNDVGFPHHPSPPPKNLISAKKPSNY 130

Query: 420  V--SNRRSQSIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEISDPEYLVDAILLLQKSM 593
               SNR  QS++ALKEH V++AS P T +P L   SS    E+ D EYLV+A LLLQKSM
Sbjct: 131  TPSSNRSIQSMKALKEH-VESASAPSTADPDLSSSSS----EVEDEEYLVEAFLLLQKSM 185

Query: 594  LEKQWNLSAETTKTTSRARKKIQVICSGTSARRRRMDSRKKVIGRKVSNPGQLNTSKQWR 773
            LEKQWNLS +  +      K+ +V CSGTSAR+RR+  RK+V+  K        +  + R
Sbjct: 186  LEKQWNLSFKARQ------KRREVTCSGTSARQRRISGRKRVMNEK--------SKSRVR 231

Query: 774  SIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXXXXGCEPSD 953
            + +  E   N LKGYVKGV+S+ELLTHAQVV LS KIKAG              G EP+D
Sbjct: 232  AALGVE---NRLKGYVKGVVSEELLTHAQVVLLSNKIKAGLLLEDHKSRLKERIGSEPTD 288

Query: 954  EQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADXXXXXXXX 1133
            EQ+A SLR+SR +LQSK+IECSLAREKLAMSN+RLVMSIAQRYDNMGAEMAD        
Sbjct: 289  EQVAASLRMSRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIG 348

Query: 1134 XXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKARLE 1313
                 EKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP+HLHERL LIRNAK RLE
Sbjct: 349  LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPSHLHERLSLIRNAKIRLE 408

Query: 1314 EKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLHSYIADNHI 1493
            EKGITPSID+IAE LNMSQKK+RNATEAISKVFSLDREAFPSLNGLPGE+LHSYIAD  +
Sbjct: 409  EKGITPSIDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIADVRL 468

Query: 1494 ENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRRIGLSRERV 1673
            ENNPWHGVDEWALKDEV+KLI  TL ERERDIIRLYYGLDNECLTWEDIS+RIGLSRERV
Sbjct: 469  ENNPWHGVDEWALKDEVNKLINTTLGERERDIIRLYYGLDNECLTWEDISKRIGLSRERV 528

Query: 1674 RQVGLVALEKLKHAARKRRLDAMLVQH 1754
            RQVGLVALEKLK+AARK R++AMLV++
Sbjct: 529  RQVGLVALEKLKNAARKGRMEAMLVKY 555


>ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor sigA-like [Glycine max]
          Length = 503

 Score =  612 bits (1578), Expect = e-172
 Identities = 334/514 (64%), Positives = 404/514 (78%), Gaps = 15/514 (2%)
 Frame = +3

Query: 258  MATA-VIGLSTGKRLLLSSTFYYSDLSEKLACTTD---PHHQNASTKNAITAKRSSNFV- 422
            MATA VIGLS GKRLL SS+++YSD+ EKL+  +D    H+Q   TK+ I AK+SSN+  
Sbjct: 1    MATAAVIGLSGGKRLL-SSSYHYSDIIEKLSYGSDFGSTHYQIVPTKSLIVAKKSSNYTP 59

Query: 423  ----SNRRSQSIRALKEHHVDTASNPCTLEPWL-IHGSSLLNEEISDPEYLVDAILLLQK 587
                SN+++QSI+ALKEH VD A  P   +PW   + S+ L  E S+  Y V+A+LLLQK
Sbjct: 60   TFPASNQQNQSIKALKEH-VDDA--PTIADPWFQSYNSNDLEVESSEMGYSVEALLLLQK 116

Query: 588  SMLEKQWNLSAET---TKTTSRARK--KIQVICSGTSARRRRMDSRKKVIGRKVSNPGQL 752
            SMLEKQWNLS E    T+ +S+ +K  K+ V CSG SAR+RRM++++K   +        
Sbjct: 117  SMLEKQWNLSFEREVLTENSSKGKKCRKVAVTCSGVSARQRRMNTKRKTAIKTCG----- 171

Query: 753  NTSKQWRSIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXXX 932
              + Q +S ISPELLQ+ LKGYVKG++S+ELL+HA+VV LS+KIK G             
Sbjct: 172  --AMQLKSKISPELLQHRLKGYVKGLVSEELLSHAEVVNLSEKIKVGLSLEEHKSRLKEK 229

Query: 933  XGCEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADX 1112
             GCEPSD+Q+ATSL+ISRT+L+++MIECSLAREKLAMSN+RLVMSIAQ+YDN+GAEM D 
Sbjct: 230  LGCEPSDDQMATSLKISRTELRARMIECSLAREKLAMSNVRLVMSIAQKYDNLGAEMGDL 289

Query: 1113 XXXXXXXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR 1292
                        EKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP HLHERL LIR
Sbjct: 290  VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPAHLHERLSLIR 349

Query: 1293 NAKARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLHS 1472
            NAK RLEE+GITP+ID+IA+ LNMSQKK+RNATEAISK+ SLDREAFPSLNGL GE+ HS
Sbjct: 350  NAKFRLEERGITPTIDRIAKYLNMSQKKVRNATEAISKIISLDREAFPSLNGLQGETHHS 409

Query: 1473 YIADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRRI 1652
            YIADN +EN PW+GVDEWALKDEV++LI +TL ERER+IIRLYYGL+ ECLTWEDIS+RI
Sbjct: 410  YIADNRVENIPWNGVDEWALKDEVNRLINVTLVEREREIIRLYYGLEKECLTWEDISKRI 469

Query: 1653 GLSRERVRQVGLVALEKLKHAARKRRLDAMLVQH 1754
            GLSRERVRQVGLVALEKLKHAARKR+++AML++H
Sbjct: 470  GLSRERVRQVGLVALEKLKHAARKRQMEAMLLKH 503


>ref|XP_002319237.2| hypothetical protein POPTR_0013s07290g [Populus trichocarpa]
            gi|550325184|gb|EEE95160.2| hypothetical protein
            POPTR_0013s07290g [Populus trichocarpa]
          Length = 499

 Score =  606 bits (1563), Expect = e-170
 Identities = 335/513 (65%), Positives = 394/513 (76%), Gaps = 13/513 (2%)
 Frame = +3

Query: 255  IMATA-VIGLSTGKRLLLSSTFYYSDLSEKLACTTD---PHHQNASTKNAITAKRSSNF- 419
            +MATA  IGL+TGKRLL SS+FY+SDL+EKL+   D    H+Q  +TK+ I AK+SS + 
Sbjct: 1    MMATASFIGLTTGKRLL-SSSFYFSDLTEKLSNVNDHGVAHYQITTTKSVIVAKKSSKYG 59

Query: 420  ----VSNRRSQSIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEISDPEYLVDAILLLQK 587
                 S R   S +ALKE  +DTAS   T+  W         EE S  +Y V+A++LLQK
Sbjct: 60   PSFPSSYRNPHSNKALKEL-IDTASASSTVATWFKTLDDF-EEESSVLDYSVEALILLQK 117

Query: 588  SMLEKQWNLSAETTKTTS----RARKKIQVICSGTSARRRRMDSRKKVIGRKVSNPGQLN 755
            SMLEKQWNLS E+  ++     ++ KKI V CSG SAR+RR+++++K            N
Sbjct: 118  SMLEKQWNLSFESINSSDSKIKKSNKKIPVTCSGVSARQRRLNNKRK----------NQN 167

Query: 756  TSKQWRSIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXXXX 935
             SK + S ISP+LL N LKGYVKGV+SDE+L H +VV+LS+ I+AG              
Sbjct: 168  QSK-FMSDISPDLLLNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSLEDHKSSLKERL 226

Query: 936  GCEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADXX 1115
            GCEPSDEQLA SLRISR DLQS++I+CSLAREKLAMSN+RLVMSIAQ+ DNMGAEMAD  
Sbjct: 227  GCEPSDEQLADSLRISRADLQSQLIQCSLAREKLAMSNVRLVMSIAQKNDNMGAEMADLV 286

Query: 1116 XXXXXXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRN 1295
                       EKFDSSKGFKISTYVYWWIRQGVSRALVEN RTLRLP HLHERLGLIRN
Sbjct: 287  QAGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENPRTLRLPNHLHERLGLIRN 346

Query: 1296 AKARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLHSY 1475
            AK RLEEKG+TPSID+IAE+LNMSQ+K+RNATEAISKVFSLDREAFPSLNGLPGE+ HSY
Sbjct: 347  AKIRLEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSY 406

Query: 1476 IADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRRIG 1655
            IADN +ENNPWHGVDEWALK+EV+KLI   L+ERER+IIRLY+GLD ECLTWEDIS+R+G
Sbjct: 407  IADNRLENNPWHGVDEWALKEEVNKLIDSALQEREREIIRLYHGLDKECLTWEDISKRMG 466

Query: 1656 LSRERVRQVGLVALEKLKHAARKRRLDAMLVQH 1754
            LSRERVRQVGLVALEKLKHAARK +L+AMLV+H
Sbjct: 467  LSRERVRQVGLVALEKLKHAARKGKLEAMLVKH 499


>ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-like [Cucumis sativus]
            gi|449514942|ref|XP_004164521.1| PREDICTED: RNA
            polymerase sigma factor sigA-like [Cucumis sativus]
          Length = 508

 Score =  605 bits (1561), Expect = e-170
 Identities = 328/514 (63%), Positives = 398/514 (77%), Gaps = 13/514 (2%)
 Frame = +3

Query: 252  MIMATAVIGLSTGKRLLLSSTFYYSDLSEKLACTTD---PHHQNASTKNAITAKRSSNFV 422
            M+   A+IGL   KRLL SS+ YYSD +EK+    D      Q +S+K+ + AK S+NF 
Sbjct: 1    MMATAAIIGLGAAKRLLNSSS-YYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFS 59

Query: 423  -----SNRRSQS-IRALKEHHVDTASNPCTLEPWLIHGSSLLNEEISDPEYLVDAILLLQ 584
                 SNR SQ  I+A+KEH V+T S+P   EPW  H ++   +E ++ +Y V+A+LLLQ
Sbjct: 60   PRYPSSNRHSQQCIKAVKEH-VETPSSPIA-EPW--HNTTSWEDEETELKYTVEALLLLQ 115

Query: 585  KSMLEKQWNLSAETTKTTSRAR----KKIQVICSGTSARRRRMDSRKKVIGRKVSNPGQL 752
            KSMLEKQW+LS E T +T   +    KK+ V CSG SAR+RRM S++K+  + V    Q 
Sbjct: 116  KSMLEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFM-AQP 174

Query: 753  NTSKQWRSIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXXX 932
              SKQ R  ISPELLQN LKGYVKG++S+ELL+HA+VV+LS+KIK G             
Sbjct: 175  KISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQR 234

Query: 933  XGCEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADX 1112
             GCEPS++QLA SL+ISR +L+S+M+E SLAREKLAMSN+RLVMSIAQRYDNMGAEMAD 
Sbjct: 235  LGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADL 294

Query: 1113 XXXXXXXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR 1292
                        EKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR
Sbjct: 295  VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR 354

Query: 1293 NAKARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLHS 1472
            NAK +L+EKGITPS+D+IAE+LNMS+KK++NATEAISKVFSLDREAFPSLNGLPGE+ HS
Sbjct: 355  NAKVKLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDREAFPSLNGLPGETHHS 414

Query: 1473 YIADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRRI 1652
            YIADN +ENNPWHG D W LK EV++LI +TL +RER+IIRLY+GLDNECLTWE+IS+RI
Sbjct: 415  YIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRI 474

Query: 1653 GLSRERVRQVGLVALEKLKHAARKRRLDAMLVQH 1754
            GLSRERVRQVGLVALEKLK AA+ R+++AML++H
Sbjct: 475  GLSRERVRQVGLVALEKLKKAAKTRKMEAMLLKH 508


>ref|XP_006419162.1| hypothetical protein EUTSA_v10002486mg [Eutrema salsugineum]
            gi|557097090|gb|ESQ37598.1| hypothetical protein
            EUTSA_v10002486mg [Eutrema salsugineum]
          Length = 519

 Score =  603 bits (1556), Expect = e-170
 Identities = 329/523 (62%), Positives = 402/523 (76%), Gaps = 22/523 (4%)
 Frame = +3

Query: 252  MIMATAVIGLSTGKRLLLSSTFYYSDLSEKLACTTD---PHHQNASTKNAITAKR----S 410
            M+   AVIGL+ GKRLL SS+FYYSD++EK     D     +  AST++ ITAK+    S
Sbjct: 1    MMATAAVIGLNAGKRLL-SSSFYYSDVTEKFLSVNDHCSSQYHIASTRSGITAKKTPSSS 59

Query: 411  SNFV-----SNRRSQSIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEIS---DPEYLVD 566
            SN+      S+R +QS +ALKE  VD  ++  +++PWL  GS    E  S   D  + V+
Sbjct: 60   SNYSPSLPSSSRHTQSAKALKET-VDVVAS--SVQPWLPPGSDKEMEGESYEDDLGHSVE 116

Query: 567  AILLLQKSMLEKQWNLSAETTKTTSR------ARKKIQVICSGTSARRRRMDSRKKVIGR 728
            A+LLLQKSMLEKQWNLS E   T+         RKK  V CSG SAR+RR+ ++KK    
Sbjct: 117  ALLLLQKSMLEKQWNLSFEKAATSESPSKKRMTRKKNPVTCSGISARQRRIGAKKKTNMS 176

Query: 729  KVSNPGQLNTSKQWRSIISPELLQNS-LKGYVKGVISDELLTHAQVVQLSQKIKAGXXXX 905
             V    ++++ KQ +S+I+ EL QN+ +KGYV+GV+S+++L+HA+VV+LS+KIK+G    
Sbjct: 177  HVKVVSEVSSGKQVKSVINSELFQNNRVKGYVRGVVSEDVLSHAEVVRLSKKIKSGLRLD 236

Query: 906  XXXXXXXXXXGCEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYD 1085
                      GCEPSDEQLA SL+ISR +LQ+ ++EC LAREKLAMSN+RLVMSIAQRYD
Sbjct: 237  DHKSRLKDRLGCEPSDEQLAISLKISRGELQAWLMECHLAREKLAMSNVRLVMSIAQRYD 296

Query: 1086 NMGAEMADXXXXXXXXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTH 1265
            NMGAEM+D             EKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTH
Sbjct: 297  NMGAEMSDLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNSRTLRLPTH 356

Query: 1266 LHERLGLIRNAKARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLN 1445
            LHERLGLIRNAK RL+EKGITPSID+IAE+LNMSQKK+RNATEA+SK+FSLDR+AFPSLN
Sbjct: 357  LHERLGLIRNAKLRLQEKGITPSIDRIAESLNMSQKKVRNATEAVSKIFSLDRDAFPSLN 416

Query: 1446 GLPGESLHSYIADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECL 1625
            GLPGE+ HSYIADN +ENNPWHG DEWALKDEV KLI+ TL ERER+IIRLYYGLD ECL
Sbjct: 417  GLPGETHHSYIADNRLENNPWHGYDEWALKDEVSKLISATLGEREREIIRLYYGLDKECL 476

Query: 1626 TWEDISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLVQH 1754
            TWEDIS+RIGLSRERVRQVGLVALEKLKHAARKR+++AM++++
Sbjct: 477  TWEDISKRIGLSRERVRQVGLVALEKLKHAARKRKMEAMILKN 519


>ref|XP_003534364.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Glycine
            max] gi|571478813|ref|XP_006587676.1| PREDICTED: RNA
            polymerase sigma factor sigA-like isoform X2 [Glycine
            max]
          Length = 503

 Score =  597 bits (1538), Expect = e-168
 Identities = 329/514 (64%), Positives = 399/514 (77%), Gaps = 15/514 (2%)
 Frame = +3

Query: 258  MATA-VIGLSTGKRLLLSSTFYYSDLSEKLACTTD---PHHQNASTKNAITAKRSSNFV- 422
            MATA VIGLS GKRLL SS+++YSD+ EKL+  +D    H+Q   TK+ I AK+SSN+  
Sbjct: 1    MATAAVIGLSGGKRLL-SSSYHYSDVIEKLSYGSDFGSTHYQIVPTKSLIAAKKSSNYTP 59

Query: 423  ----SNRRSQSIRALKEHHVDTASNPCTLEPWLIH-GSSLLNEEISDPEYLVDAILLLQK 587
                SN+++QSI+ALKEH VD A  P   + W     S+ L  E S+  Y V+A+LLLQK
Sbjct: 60   TFPASNQQNQSIKALKEH-VDDA--PTIADSWFQSCNSNDLEVESSEMGYSVEALLLLQK 116

Query: 588  SMLEKQWNLSAET---TKTTSRARK--KIQVICSGTSARRRRMDSRKKVIGRKVSNPGQL 752
            SMLEKQWNLS E    T+ +S+ +K  K+ V CSG SAR+RRM++++K   +        
Sbjct: 117  SMLEKQWNLSFEREVLTEHSSKGKKCKKVAVTCSGVSARQRRMNTKRKTAIKTCG----- 171

Query: 753  NTSKQWRSIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXXX 932
              + Q +S ISPELLQ+ LKGYVKG++S+ELL+HA+VV LS++IK G             
Sbjct: 172  --AMQLKSKISPELLQHRLKGYVKGIVSEELLSHAEVVNLSERIKVGLSLEEHKSRLKER 229

Query: 933  XGCEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADX 1112
             GCEPSD+Q+A SL+ISRT+L+++MIEC+LAREKLAMSN+RLVMSIAQ+YDN+GAEM D 
Sbjct: 230  LGCEPSDDQMAISLKISRTELRARMIECTLAREKLAMSNVRLVMSIAQKYDNLGAEMGDL 289

Query: 1113 XXXXXXXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR 1292
                        EKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP HLHERL LIR
Sbjct: 290  VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPAHLHERLSLIR 349

Query: 1293 NAKARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLHS 1472
            NAK RLEE+GITP+ID+IA+ LNMSQKK+RNATEAISK  SLDREAFPSLNG+ GE+ HS
Sbjct: 350  NAKFRLEERGITPTIDRIAKYLNMSQKKVRNATEAISKTISLDREAFPSLNGIQGETHHS 409

Query: 1473 YIADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRRI 1652
            YIAD+ +EN PW+GVDEWALKDEV+KLI +TL ERER+IIRLYYGLD E LTWEDIS+RI
Sbjct: 410  YIADDRVENIPWNGVDEWALKDEVNKLINVTLVEREREIIRLYYGLDKEGLTWEDISKRI 469

Query: 1653 GLSRERVRQVGLVALEKLKHAARKRRLDAMLVQH 1754
            GLSRERVRQVGLVALEKLKHAARKR+++AML++H
Sbjct: 470  GLSRERVRQVGLVALEKLKHAARKRQMEAMLLKH 503


>gb|EPS67249.1| sigma factor [Genlisea aurea]
          Length = 517

 Score =  596 bits (1536), Expect = e-167
 Identities = 331/526 (62%), Positives = 394/526 (74%), Gaps = 25/526 (4%)
 Frame = +3

Query: 252  MIMATAVIGLSTGKRLLL-SSTFYYSDLSEKLACTTDPHHQNASTKN----AITAKRSSN 416
            M +A  V GLSTGKRLLL  S F+YSDL+EK      PH Q  ST+      I A+RSSN
Sbjct: 1    MTVAALVGGLSTGKRLLLLGSAFFYSDLAEKHP--DPPHCQLPSTRTRTGAVINARRSSN 58

Query: 417  FVSNR----RSQS---IRALKEHHVDTA-SNPCTLEPWLIHGSSLLNEEISDPEYLVDAI 572
             V++R    R+QS   IRALK+H   TA + PC+ E W+        EE SD E LVDA+
Sbjct: 59   LVADRPRRRRTQSESSIRALKQHRQSTAPTKPCSPESWMA-------EEESDSENLVDAV 111

Query: 573  LLLQKSMLEKQWNLSAETTK-------TTSRARKKIQVICSGTSARRRRMDSRKKVIGRK 731
            LLLQKSMLEKQWNL AE T        +T+   ++I V  SGTSAR RR++SRK+VIGR+
Sbjct: 112  LLLQKSMLEKQWNLPAEMTSGGISTADSTTDRHRQISVTGSGTSARNRRLESRKRVIGRR 171

Query: 732  VSNPGQLNTSKQWRSIISPELLQNSLKGYVKGVI---SDELLTHAQVVQLSQKIKAGXXX 902
            ++   QLN  KQ RSI +P L+Q+  + ++K      S++LLTH+QVVQLSQKIK G   
Sbjct: 172  IATSSQLNIRKQGRSITNPALVQSRPRAHLKAAAAAASEDLLTHSQVVQLSQKIKTGLML 231

Query: 903  XXXXXXXXXXXGCEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRY 1082
                       GCEPS+EQLA SLRIS+TDLQ+K++E S+AREKLA SN+RLVMSIAQRY
Sbjct: 232  EEHKSRLKGKLGCEPSEEQLANSLRISKTDLQTKLMESSIAREKLAKSNVRLVMSIAQRY 291

Query: 1083 DNMGAEMADXXXXXXXXXXXXXEKFDSSKGFKISTYVYWWIRQ--GVSRALVENSRTLRL 1256
            D+MG +MAD             EKFDSSKGFKISTYVYWWIRQ  GVSR+L+ENSRTLRL
Sbjct: 292  DHMGVDMADLIQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQVRGVSRSLMENSRTLRL 351

Query: 1257 PTHLHERLGLIRNAKARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFP 1436
            P+HLHERL LIR AKARL EKG+ P++ KIAE LNMS+KK+ NATEA+S V SLDREAFP
Sbjct: 352  PSHLHERLSLIRTAKARLAEKGVLPTVAKIAECLNMSEKKVINATEAVSIVISLDREAFP 411

Query: 1437 SLNGLPGESLHSYIADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDN 1616
            SLNGLPGE+ HSYIADN ++NNPW+G DEWALKDE+D+L++ TLRERER+IIRLYYGL++
Sbjct: 412  SLNGLPGETYHSYIADNQMDNNPWYGFDEWALKDEIDRLLSSTLREREREIIRLYYGLEH 471

Query: 1617 ECLTWEDISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLVQH 1754
            E LTWEDISRRIGLSRERVRQVGLVALEKLKHAAR ++LDAMLVQH
Sbjct: 472  ESLTWEDISRRIGLSRERVRQVGLVALEKLKHAARNKKLDAMLVQH 517