BLASTX nr result
ID: Rehmannia25_contig00006219
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00006219
(1052 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX94777.1| Chloroplast stem-loop binding protein of 41 kDa i... 442 e-121
ref|XP_002306773.2| hypothetical protein POPTR_0005s23110g [Popu... 438 e-120
gb|EXB39373.1| hypothetical protein L484_025068 [Morus notabilis] 431 e-118
ref|XP_002275066.1| PREDICTED: uncharacterized protein At3g63140... 431 e-118
ref|XP_002878498.1| hypothetical protein ARALYDRAFT_486816 [Arab... 430 e-118
ref|XP_002302114.1| mRNA-binding family protein [Populus trichoc... 430 e-118
ref|XP_004140080.1| PREDICTED: chloroplast stem-loop binding pro... 429 e-118
gb|EMJ01093.1| hypothetical protein PRUPE_ppa006606mg [Prunus pe... 426 e-117
ref|XP_006291238.1| hypothetical protein CARUB_v10017370mg [Caps... 428 e-117
ref|XP_004290655.1| PREDICTED: chloroplast stem-loop binding pro... 427 e-117
ref|NP_191873.1| chloroplast stem-loop binding protein-41 [Arabi... 427 e-117
ref|XP_006349675.1| PREDICTED: chloroplast stem-loop binding pro... 427 e-117
ref|NP_001234656.1| mRNA binding protein precursor [Solanum lyco... 427 e-117
gb|AAP87140.1| mRNA-binding protein precursor, partial [Nicotian... 426 e-117
ref|XP_006402306.1| hypothetical protein EUTSA_v10006498mg [Eutr... 426 e-117
ref|XP_003518924.1| PREDICTED: chloroplast stem-loop binding pro... 425 e-116
ref|XP_006444077.1| hypothetical protein CICLE_v10020449mg [Citr... 424 e-116
ref|XP_004955807.1| PREDICTED: chloroplast stem-loop binding pro... 423 e-116
gb|EOX94778.1| Chloroplast stem-loop binding protein of 41 kDa i... 423 e-116
ref|XP_003536518.1| PREDICTED: chloroplast stem-loop binding pro... 421 e-115
>gb|EOX94777.1| Chloroplast stem-loop binding protein of 41 kDa isoform 1 [Theobroma
cacao]
Length = 400
Score = 442 bits (1136), Expect = e-121
Identities = 217/246 (88%), Positives = 227/246 (92%), Gaps = 3/246 (1%)
Frame = +3
Query: 324 PPSFAVRA---EKKNVLVVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGSDKMKKP 494
P SF V+A EKK VL+VNTNSGGHAVIGFYFAKELL +GH VTILTVG+EGSDKMKKP
Sbjct: 61 PSSFTVKASGGEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGDEGSDKMKKP 120
Query: 495 PFNRFSEIVSGGGKTVWGEPADIGKVLEGATFDVVLDNNGKDLDTVRPVADWAKSSGVKQ 674
PFNRFSEIVS GGKTVWG+PAD+GKV+ GATFDVVLDNNGKDLDTVRPV DWAKSSGV Q
Sbjct: 121 PFNRFSEIVSAGGKTVWGDPADVGKVVAGATFDVVLDNNGKDLDTVRPVIDWAKSSGVDQ 180
Query: 675 FLFISSAGIYKPTDEPPHVEGDTVKADAGHVGVEKYISETFGNWASFRPQYMIGSGNNKD 854
FL+ISSAGIYKPTDEPPHVEGD VKADAGHVGVEKYI+E F +WA FRPQYMIGSGNNKD
Sbjct: 181 FLYISSAGIYKPTDEPPHVEGDVVKADAGHVGVEKYIAEIFSSWAIFRPQYMIGSGNNKD 240
Query: 855 CEEWFFDRIVRGRPVLIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAASGNIFNCVSDRAV 1034
CEEWFFDRIVR RPV IPGSGMQLTNIAHVRDLSSMLTLAVEKPEAAS NIFNCVSDRAV
Sbjct: 241 CEEWFFDRIVRKRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAASSNIFNCVSDRAV 300
Query: 1035 TLDGMA 1052
TLDGMA
Sbjct: 301 TLDGMA 306
>ref|XP_002306773.2| hypothetical protein POPTR_0005s23110g [Populus trichocarpa]
gi|550339578|gb|EEE93769.2| hypothetical protein
POPTR_0005s23110g [Populus trichocarpa]
Length = 437
Score = 438 bits (1126), Expect = e-120
Identities = 216/252 (85%), Positives = 227/252 (90%)
Frame = +3
Query: 297 SPRRTVSSFPPSFAVRAEKKNVLVVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGS 476
S R SSFP A AEKK +L+VNTNSGGHAVIGFYFAKELL +GH V+ILTVGEE S
Sbjct: 93 SRRLFASSFPVK-ASAAEKKKILIVNTNSGGHAVIGFYFAKELLGSGHEVSILTVGEESS 151
Query: 477 DKMKKPPFNRFSEIVSGGGKTVWGEPADIGKVLEGATFDVVLDNNGKDLDTVRPVADWAK 656
DKMKKPPF+RFSEIV GGKTVWG PA++GK +EGATFDVVLDNNGKDLDTVRPV DWAK
Sbjct: 152 DKMKKPPFSRFSEIVGAGGKTVWGNPAEVGKAVEGATFDVVLDNNGKDLDTVRPVVDWAK 211
Query: 657 SSGVKQFLFISSAGIYKPTDEPPHVEGDTVKADAGHVGVEKYISETFGNWASFRPQYMIG 836
S+GVKQFLFISSAGIYKPTDEPPHVEGD VKADAGHVGVEKYI+E F +WA FRPQYMIG
Sbjct: 212 SAGVKQFLFISSAGIYKPTDEPPHVEGDVVKADAGHVGVEKYIAEIFSSWAIFRPQYMIG 271
Query: 837 SGNNKDCEEWFFDRIVRGRPVLIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAASGNIFNC 1016
SGNNKDCEEWFFDRIVR RPV IPGSGMQLTNIAHVRDLSSMLTLAVE PEAASGNIFNC
Sbjct: 272 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQLTNIAHVRDLSSMLTLAVENPEAASGNIFNC 331
Query: 1017 VSDRAVTLDGMA 1052
VSDRAVTLDGMA
Sbjct: 332 VSDRAVTLDGMA 343
>gb|EXB39373.1| hypothetical protein L484_025068 [Morus notabilis]
Length = 408
Score = 431 bits (1109), Expect = e-118
Identities = 208/244 (85%), Positives = 226/244 (92%), Gaps = 3/244 (1%)
Frame = +3
Query: 330 SFAVRA---EKKNVLVVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGSDKMKKPPF 500
SF+VRA +KK VL+VNTNSGGHAVIGFYFAKELL +GH VTILTVG+EGSDKMKKPPF
Sbjct: 71 SFSVRASAADKKRVLIVNTNSGGHAVIGFYFAKELLGSGHDVTILTVGDEGSDKMKKPPF 130
Query: 501 NRFSEIVSGGGKTVWGEPADIGKVLEGATFDVVLDNNGKDLDTVRPVADWAKSSGVKQFL 680
NRFSEIVS GGKTVWG+PA++GKV+ GA FDVVLDNNGKDLDTVRPV DWAKSSGVK F
Sbjct: 131 NRFSEIVSAGGKTVWGDPAEVGKVVGGAEFDVVLDNNGKDLDTVRPVVDWAKSSGVKHFF 190
Query: 681 FISSAGIYKPTDEPPHVEGDTVKADAGHVGVEKYISETFGNWASFRPQYMIGSGNNKDCE 860
FISSAGIYKPTDEPPHVEGD VKADAGHVGVEKYI+E F +WA+FRPQYMIGSGNNKDCE
Sbjct: 191 FISSAGIYKPTDEPPHVEGDVVKADAGHVGVEKYIAEVFSSWAAFRPQYMIGSGNNKDCE 250
Query: 861 EWFFDRIVRGRPVLIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAASGNIFNCVSDRAVTL 1040
EWFFDRIVR RPV IPGSG+QLTNI+HV+DLSSML+LAVEKPEAA+GNIFNCVSDR VTL
Sbjct: 251 EWFFDRIVRDRPVPIPGSGLQLTNISHVKDLSSMLSLAVEKPEAANGNIFNCVSDRTVTL 310
Query: 1041 DGMA 1052
DG+A
Sbjct: 311 DGIA 314
>ref|XP_002275066.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic [Vitis
vinifera] gi|147789789|emb|CAN73874.1| hypothetical
protein VITISV_039540 [Vitis vinifera]
Length = 397
Score = 431 bits (1109), Expect = e-118
Identities = 210/252 (83%), Positives = 225/252 (89%)
Frame = +3
Query: 297 SPRRTVSSFPPSFAVRAEKKNVLVVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGS 476
SP T + V+A+KK VL+VNTNSGGHAVIGFYFAK+LL +GH VTI+TVGEE S
Sbjct: 52 SPTSTKRLSFSTLNVKAQKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTIMTVGEENS 111
Query: 477 DKMKKPPFNRFSEIVSGGGKTVWGEPADIGKVLEGATFDVVLDNNGKDLDTVRPVADWAK 656
DKMKKPPF+RFSEI S GGKTVWG+PA++GKV+ GA FDVVLDNNGKD+DTVRPV DWAK
Sbjct: 112 DKMKKPPFSRFSEITSAGGKTVWGDPAEVGKVVAGAAFDVVLDNNGKDIDTVRPVVDWAK 171
Query: 657 SSGVKQFLFISSAGIYKPTDEPPHVEGDTVKADAGHVGVEKYISETFGNWASFRPQYMIG 836
SSGV+QFLFISSAGIYKPTDEPPHVEGD VKADAGHVGVE YISE FG+WA FRPQYMIG
Sbjct: 172 SSGVEQFLFISSAGIYKPTDEPPHVEGDIVKADAGHVGVETYISEVFGSWAIFRPQYMIG 231
Query: 837 SGNNKDCEEWFFDRIVRGRPVLIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAASGNIFNC 1016
SGNNKDCEEWFFDRIVR RPV IPGSGMQLTNIAHVRDLSSMLTLAVE P AASGNIFNC
Sbjct: 232 SGNNKDCEEWFFDRIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVENPAAASGNIFNC 291
Query: 1017 VSDRAVTLDGMA 1052
VSDRAVTLDGMA
Sbjct: 292 VSDRAVTLDGMA 303
>ref|XP_002878498.1| hypothetical protein ARALYDRAFT_486816 [Arabidopsis lyrata subsp.
lyrata] gi|297324336|gb|EFH54757.1| hypothetical protein
ARALYDRAFT_486816 [Arabidopsis lyrata subsp. lyrata]
Length = 408
Score = 430 bits (1106), Expect = e-118
Identities = 208/247 (84%), Positives = 224/247 (90%), Gaps = 4/247 (1%)
Frame = +3
Query: 324 PPSFAVRA----EKKNVLVVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGSDKMKK 491
P F V+A +KKNVL+VNTNSGGHAVIGFYFAKELL+AGHGVTI+TVG+E SDKMKK
Sbjct: 68 PQGFTVKASSVGDKKNVLIVNTNSGGHAVIGFYFAKELLSAGHGVTIMTVGDESSDKMKK 127
Query: 492 PPFNRFSEIVSGGGKTVWGEPADIGKVLEGATFDVVLDNNGKDLDTVRPVADWAKSSGVK 671
PPFNRFSEI+SGGGKTVWG PAD+ V+ G TFDVVLDNNGKDLDTVRPV DWAKSSGVK
Sbjct: 128 PPFNRFSEIISGGGKTVWGNPADVANVVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVK 187
Query: 672 QFLFISSAGIYKPTDEPPHVEGDTVKADAGHVGVEKYISETFGNWASFRPQYMIGSGNNK 851
QFLFISSAGIYK T++PPHVEGD VKADAGHV VEKY++ETFGNWASFRPQYMIGSGNNK
Sbjct: 188 QFLFISSAGIYKSTEQPPHVEGDAVKADAGHVAVEKYLAETFGNWASFRPQYMIGSGNNK 247
Query: 852 DCEEWFFDRIVRGRPVLIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAASGNIFNCVSDRA 1031
DCEEWFFDRIVR R V IPGSG+QLTNI+HVRDLSSMLT AV P+AASGNIFNCVSDRA
Sbjct: 248 DCEEWFFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVTNPKAASGNIFNCVSDRA 307
Query: 1032 VTLDGMA 1052
VTLDGMA
Sbjct: 308 VTLDGMA 314
>ref|XP_002302114.1| mRNA-binding family protein [Populus trichocarpa]
gi|222843840|gb|EEE81387.1| mRNA-binding family protein
[Populus trichocarpa]
Length = 404
Score = 430 bits (1106), Expect = e-118
Identities = 212/247 (85%), Positives = 222/247 (89%), Gaps = 3/247 (1%)
Frame = +3
Query: 321 FPPSFAVRA---EKKNVLVVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGSDKMKK 491
F SF V+A EKK VL+VNTNSGGHAVIGFYFAKELL +GH VTILTVGEE SDKMKK
Sbjct: 64 FTSSFTVKASAAEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEESSDKMKK 123
Query: 492 PPFNRFSEIVSGGGKTVWGEPADIGKVLEGATFDVVLDNNGKDLDTVRPVADWAKSSGVK 671
PPF+RFSEIVS GGKTVWG PA++GKV+EGA FDVVLDNNGKDLD VRPV DWAKS+GVK
Sbjct: 124 PPFSRFSEIVSAGGKTVWGNPAEVGKVVEGAAFDVVLDNNGKDLDAVRPVVDWAKSAGVK 183
Query: 672 QFLFISSAGIYKPTDEPPHVEGDTVKADAGHVGVEKYISETFGNWASFRPQYMIGSGNNK 851
QFLFISSAGIYK TDEPPHVEGD VKADAGHVGVEKYI+E F +WA FRPQYMIGSGNNK
Sbjct: 184 QFLFISSAGIYKATDEPPHVEGDVVKADAGHVGVEKYIAEIFSSWAIFRPQYMIGSGNNK 243
Query: 852 DCEEWFFDRIVRGRPVLIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAASGNIFNCVSDRA 1031
DCEEWFFDRIVR RPV IPGSGMQLTNIAH RDLSSMLTLAVE PEAASG IFNCVSDRA
Sbjct: 244 DCEEWFFDRIVRKRPVPIPGSGMQLTNIAHARDLSSMLTLAVENPEAASGRIFNCVSDRA 303
Query: 1032 VTLDGMA 1052
VTLDGMA
Sbjct: 304 VTLDGMA 310
>ref|XP_004140080.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Cucumis sativus]
Length = 409
Score = 429 bits (1103), Expect = e-118
Identities = 213/253 (84%), Positives = 227/253 (89%), Gaps = 7/253 (2%)
Frame = +3
Query: 315 SSFPPS----FAVRAE---KKNVLVVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEG 473
SSF PS F+VRA KK VL+VNTNSGGHAVIGFYFAK+LL +GH VTILTVGE+
Sbjct: 63 SSFRPSTVFSFSVRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQS 122
Query: 474 SDKMKKPPFNRFSEIVSGGGKTVWGEPADIGKVLEGATFDVVLDNNGKDLDTVRPVADWA 653
SDKM KPPFNRFSEIVSGGGKTVWG+PA+IGKV+EGA+FDVVLDNNGKD+DTVRPV DWA
Sbjct: 123 SDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDTVRPVIDWA 182
Query: 654 KSSGVKQFLFISSAGIYKPTDEPPHVEGDTVKADAGHVGVEKYISETFGNWASFRPQYMI 833
KSSGVKQFLFISSAGIYK TDEPPHVEGD VKADAGHVGVEKYI+E F +WA FRPQYMI
Sbjct: 183 KSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAVFRPQYMI 242
Query: 834 GSGNNKDCEEWFFDRIVRGRPVLIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAASGNIFN 1013
GSGNNKDCEEWFFDRIVR RP+ IPGSGMQLTNIAHVRDLSSMLTLAVEKP+ A NIFN
Sbjct: 243 GSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFN 302
Query: 1014 CVSDRAVTLDGMA 1052
CVS RAVTLDGMA
Sbjct: 303 CVSGRAVTLDGMA 315
>gb|EMJ01093.1| hypothetical protein PRUPE_ppa006606mg [Prunus persica]
Length = 403
Score = 426 bits (1096), Expect(2) = e-117
Identities = 205/244 (84%), Positives = 224/244 (91%), Gaps = 3/244 (1%)
Frame = +3
Query: 330 SFAVRA---EKKNVLVVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGSDKMKKPPF 500
SF+++A EKK VL+VNTN GGHAVIGFYFAKELL +GH VT+LTVGEE SDKMKKPPF
Sbjct: 66 SFSIKASAGEKKKVLIVNTNGGGHAVIGFYFAKELLGSGHQVTVLTVGEESSDKMKKPPF 125
Query: 501 NRFSEIVSGGGKTVWGEPADIGKVLEGATFDVVLDNNGKDLDTVRPVADWAKSSGVKQFL 680
+RFSEIVS GGKTVWGEPADIGK+LEG FDVVL+NNGKDLDTVRPVADWAKSSGVKQFL
Sbjct: 126 SRFSEIVSAGGKTVWGEPADIGKILEGTAFDVVLENNGKDLDTVRPVADWAKSSGVKQFL 185
Query: 681 FISSAGIYKPTDEPPHVEGDTVKADAGHVGVEKYISETFGNWASFRPQYMIGSGNNKDCE 860
+ISSAGIYKPT+EPPHVEGD VKADA HV VEKYI+E FG+WA FRPQYM+GSGNNKDCE
Sbjct: 186 YISSAGIYKPTEEPPHVEGDVVKADASHVAVEKYIAEIFGSWAIFRPQYMLGSGNNKDCE 245
Query: 861 EWFFDRIVRGRPVLIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAASGNIFNCVSDRAVTL 1040
EWFFDRI+R RPV IPGSG+QLTNI+HVRDLSSMLTLAVE P+AAS NIFNCVSDRAVTL
Sbjct: 246 EWFFDRILRDRPVPIPGSGLQLTNISHVRDLSSMLTLAVENPDAASSNIFNCVSDRAVTL 305
Query: 1041 DGMA 1052
DG+A
Sbjct: 306 DGLA 309
Score = 25.0 bits (53), Expect(2) = e-117
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +2
Query: 215 PISLFNLPSLSLLISLHFPFFSCSL 289
P SL +LP LSL S HF S SL
Sbjct: 22 PPSLSHLPRLSLSSSSHFSTLSSSL 46
>ref|XP_006291238.1| hypothetical protein CARUB_v10017370mg [Capsella rubella]
gi|482559945|gb|EOA24136.1| hypothetical protein
CARUB_v10017370mg [Capsella rubella]
Length = 404
Score = 428 bits (1101), Expect = e-117
Identities = 211/256 (82%), Positives = 227/256 (88%), Gaps = 4/256 (1%)
Frame = +3
Query: 297 SPRRTVSSFPPSFAVRA----EKKNVLVVNTNSGGHAVIGFYFAKELLAAGHGVTILTVG 464
S R + +S P F V+A EKKNVL+VNTNSGGHAVIGFYFAKELL+AGHGVTI+TVG
Sbjct: 55 SLRTSRTSSPQRFTVKASSVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAGHGVTIMTVG 114
Query: 465 EEGSDKMKKPPFNRFSEIVSGGGKTVWGEPADIGKVLEGATFDVVLDNNGKDLDTVRPVA 644
+E SDKMKKPPF+RFSEIVS GGKTVWG PAD+ V+ G TFDVVLDNNGKDLDTVRPV
Sbjct: 115 DESSDKMKKPPFSRFSEIVSAGGKTVWGNPADVANVIGGQTFDVVLDNNGKDLDTVRPVV 174
Query: 645 DWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDTVKADAGHVGVEKYISETFGNWASFRPQ 824
DWAKSSGVKQFLFISSAGIYK T+EPPHVEGD VKADAGHVGVEKY++ETFGNWASFRPQ
Sbjct: 175 DWAKSSGVKQFLFISSAGIYKSTEEPPHVEGDAVKADAGHVGVEKYLAETFGNWASFRPQ 234
Query: 825 YMIGSGNNKDCEEWFFDRIVRGRPVLIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAASGN 1004
YMIGSGNNKDCEEWFFDRIVR R V IPGSG+QLTNI+HVRDLSSMLT AV P+AA N
Sbjct: 235 YMIGSGNNKDCEEWFFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVTNPDAACCN 294
Query: 1005 IFNCVSDRAVTLDGMA 1052
IFNCVSDRAVTLDGMA
Sbjct: 295 IFNCVSDRAVTLDGMA 310
>ref|XP_004290655.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 404
Score = 427 bits (1099), Expect = e-117
Identities = 210/246 (85%), Positives = 224/246 (91%), Gaps = 3/246 (1%)
Frame = +3
Query: 324 PPSFAVRA---EKKNVLVVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGSDKMKKP 494
P SF+V+A +KK VL+VNTNSGGHAVIGFYFAKELL +GH VTILTVGEE SDKMKK
Sbjct: 65 PCSFSVKAIAADKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEESSDKMKKT 124
Query: 495 PFNRFSEIVSGGGKTVWGEPADIGKVLEGATFDVVLDNNGKDLDTVRPVADWAKSSGVKQ 674
PF RFSEIV GGKTVWGEPA+I KVLEG+ FDVVLDNNGKDLD V+PVADWAKSSGVKQ
Sbjct: 125 PFTRFSEIVGAGGKTVWGEPAEIAKVLEGSAFDVVLDNNGKDLDAVKPVADWAKSSGVKQ 184
Query: 675 FLFISSAGIYKPTDEPPHVEGDTVKADAGHVGVEKYISETFGNWASFRPQYMIGSGNNKD 854
FLFISSAGIYKPTDEPPHVEGD VKADAGHV VEKY++E F +WASFRPQYMIGSGNNKD
Sbjct: 185 FLFISSAGIYKPTDEPPHVEGDVVKADAGHVAVEKYMAEVFSSWASFRPQYMIGSGNNKD 244
Query: 855 CEEWFFDRIVRGRPVLIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAASGNIFNCVSDRAV 1034
CEEWFFDRIVR RPV IPGSGMQLT I+HVRDLSSMLTLAVEKP+AASGNIFNCVSDRAV
Sbjct: 245 CEEWFFDRIVRDRPVPIPGSGMQLTVISHVRDLSSMLTLAVEKPDAASGNIFNCVSDRAV 304
Query: 1035 TLDGMA 1052
TLDG+A
Sbjct: 305 TLDGLA 310
>ref|NP_191873.1| chloroplast stem-loop binding protein-41 [Arabidopsis thaliana]
gi|75311698|sp|Q9LYA9.1|CP41A_ARATH RecName:
Full=Chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic; Short=CSP41-a; Flags: Precursor
gi|16226201|gb|AAL16101.1|AF428269_1 AT3g63140/T20O10_240
[Arabidopsis thaliana] gi|7573443|emb|CAB87759.1| mRNA
binding protein precursor-like [Arabidopsis thaliana]
gi|16649035|gb|AAL24369.1| mRNA binding protein
precursor-like [Arabidopsis thaliana]
gi|22136252|gb|AAM91204.1| mRNA binding protein
precursor-like [Arabidopsis thaliana]
gi|332646919|gb|AEE80440.1| chloroplast stem-loop binding
protein-41 [Arabidopsis thaliana]
Length = 406
Score = 427 bits (1098), Expect = e-117
Identities = 209/247 (84%), Positives = 223/247 (90%), Gaps = 4/247 (1%)
Frame = +3
Query: 324 PPSFAVRA----EKKNVLVVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGSDKMKK 491
P F V+A EKKNVL+VNTNSGGHAVIGFYFAKELL+AGH VTILTVG+E S+KMKK
Sbjct: 66 PQKFTVKASSVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTILTVGDESSEKMKK 125
Query: 492 PPFNRFSEIVSGGGKTVWGEPADIGKVLEGATFDVVLDNNGKDLDTVRPVADWAKSSGVK 671
PPFNRFSEIVSGGGKTVWG PA++ V+ G TFDVVLDNNGKDLDTVRPV DWAKSSGVK
Sbjct: 126 PPFNRFSEIVSGGGKTVWGNPANVANVVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVK 185
Query: 672 QFLFISSAGIYKPTDEPPHVEGDTVKADAGHVGVEKYISETFGNWASFRPQYMIGSGNNK 851
QFLFISSAGIYK T++PPHVEGD VKADAGHV VEKY++ETFGNWASFRPQYMIGSGNNK
Sbjct: 186 QFLFISSAGIYKSTEQPPHVEGDAVKADAGHVVVEKYLAETFGNWASFRPQYMIGSGNNK 245
Query: 852 DCEEWFFDRIVRGRPVLIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAASGNIFNCVSDRA 1031
DCEEWFFDRIVR R V IPGSG+QLTNI+HVRDLSSMLT AV PEAASGNIFNCVSDRA
Sbjct: 246 DCEEWFFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRA 305
Query: 1032 VTLDGMA 1052
VTLDGMA
Sbjct: 306 VTLDGMA 312
>ref|XP_006349675.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Solanum tuberosum]
Length = 401
Score = 427 bits (1098), Expect = e-117
Identities = 210/256 (82%), Positives = 226/256 (88%), Gaps = 4/256 (1%)
Frame = +3
Query: 297 SPRRTVSSFPPSFAVRA----EKKNVLVVNTNSGGHAVIGFYFAKELLAAGHGVTILTVG 464
S R + +S+ + V+A EKK VL+VNTNSGGHAVIGFYFAKELL +GH VT+LTVG
Sbjct: 52 SRRVSPNSYSSTTVVQASGAVEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHDVTVLTVG 111
Query: 465 EEGSDKMKKPPFNRFSEIVSGGGKTVWGEPADIGKVLEGATFDVVLDNNGKDLDTVRPVA 644
EE SDKMKK PF RFSEI GG+TVWG PAD+GK+LEG FD VLDNNGKDLD+V PVA
Sbjct: 112 EESSDKMKKTPFTRFSEITGAGGRTVWGNPADVGKILEGEVFDAVLDNNGKDLDSVSPVA 171
Query: 645 DWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDTVKADAGHVGVEKYISETFGNWASFRPQ 824
DWAKSSGVKQFLFISSAGIYKPTDEPPHVEGD VKADAGHV VEKYISE FG+WASFRPQ
Sbjct: 172 DWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDAVKADAGHVLVEKYISEIFGSWASFRPQ 231
Query: 825 YMIGSGNNKDCEEWFFDRIVRGRPVLIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAASGN 1004
YMIGSGNNKDCEEWFFDRIVRGRPVLIPGSGMQLTNI+HVRDLSSMLTLAV+ P AASG+
Sbjct: 232 YMIGSGNNKDCEEWFFDRIVRGRPVLIPGSGMQLTNISHVRDLSSMLTLAVQNPAAASGH 291
Query: 1005 IFNCVSDRAVTLDGMA 1052
IFNCVSDRAVTLDGMA
Sbjct: 292 IFNCVSDRAVTLDGMA 307
>ref|NP_001234656.1| mRNA binding protein precursor [Solanum lycopersicum]
gi|26453355|gb|AAD21574.3| mRNA binding protein precursor
[Solanum lycopersicum]
Length = 407
Score = 427 bits (1097), Expect = e-117
Identities = 208/252 (82%), Positives = 221/252 (87%)
Frame = +3
Query: 297 SPRRTVSSFPPSFAVRAEKKNVLVVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGS 476
SP+ S+ + EKK VL+VNTNSGGHAVIGFYFAKELL +GH VT+LTVGEE S
Sbjct: 62 SPKSYSSTSVVQASGAVEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHDVTVLTVGEESS 121
Query: 477 DKMKKPPFNRFSEIVSGGGKTVWGEPADIGKVLEGATFDVVLDNNGKDLDTVRPVADWAK 656
DKMKK PF RFSEI GG+TVWG PAD+GK+LEG FD VLDNNGKDLD+V PVADWAK
Sbjct: 122 DKMKKTPFTRFSEITGAGGRTVWGNPADVGKILEGEVFDAVLDNNGKDLDSVSPVADWAK 181
Query: 657 SSGVKQFLFISSAGIYKPTDEPPHVEGDTVKADAGHVGVEKYISETFGNWASFRPQYMIG 836
SSGVKQFLFISSAGIYKPTDEPPHVEGD VKADAGHV VEKYISE FG+WASFRPQYMIG
Sbjct: 182 SSGVKQFLFISSAGIYKPTDEPPHVEGDAVKADAGHVLVEKYISEIFGSWASFRPQYMIG 241
Query: 837 SGNNKDCEEWFFDRIVRGRPVLIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAASGNIFNC 1016
SGNNKDCEEWFFDRIVRGRPVLIPGSGMQLTNI+HVRDLSSMLTLAV+ P AASG IFNC
Sbjct: 242 SGNNKDCEEWFFDRIVRGRPVLIPGSGMQLTNISHVRDLSSMLTLAVQNPAAASGRIFNC 301
Query: 1017 VSDRAVTLDGMA 1052
VSDRAVTLDGMA
Sbjct: 302 VSDRAVTLDGMA 313
>gb|AAP87140.1| mRNA-binding protein precursor, partial [Nicotiana tabacum]
Length = 405
Score = 426 bits (1096), Expect = e-117
Identities = 206/239 (86%), Positives = 216/239 (90%)
Frame = +3
Query: 336 AVRAEKKNVLVVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGSDKMKKPPFNRFSE 515
A AEKK VL+VNTNSGGHAVIGFYFAKELL +GH VTILTVGEE SDKMKK PFNRFSE
Sbjct: 73 ASAAEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHDVTILTVGEESSDKMKKTPFNRFSE 132
Query: 516 IVSGGGKTVWGEPADIGKVLEGATFDVVLDNNGKDLDTVRPVADWAKSSGVKQFLFISSA 695
I GG+T+WG+PAD+GK+LEG FD VLDNNGKDLD VRPVADWAKSSG KQFLFISSA
Sbjct: 133 ITGAGGRTIWGDPADVGKILEGEVFDAVLDNNGKDLDAVRPVADWAKSSGAKQFLFISSA 192
Query: 696 GIYKPTDEPPHVEGDTVKADAGHVGVEKYISETFGNWASFRPQYMIGSGNNKDCEEWFFD 875
GIYK TDEPPHVEGD VKADAGHVGVEKYISE F +WASFRPQYMIGSGNNKDCEEWFFD
Sbjct: 193 GIYKSTDEPPHVEGDAVKADAGHVGVEKYISEIFDSWASFRPQYMIGSGNNKDCEEWFFD 252
Query: 876 RIVRGRPVLIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAASGNIFNCVSDRAVTLDGMA 1052
RIVRGRPV IPGSGMQLTNIAHVRDLSSMLT AV+ P AASG+IFNCVSDRAVTLDGMA
Sbjct: 253 RIVRGRPVPIPGSGMQLTNIAHVRDLSSMLTAAVQNPAAASGHIFNCVSDRAVTLDGMA 311
>ref|XP_006402306.1| hypothetical protein EUTSA_v10006498mg [Eutrema salsugineum]
gi|557103405|gb|ESQ43759.1| hypothetical protein
EUTSA_v10006498mg [Eutrema salsugineum]
Length = 402
Score = 426 bits (1095), Expect = e-117
Identities = 208/252 (82%), Positives = 221/252 (87%)
Frame = +3
Query: 297 SPRRTVSSFPPSFAVRAEKKNVLVVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGS 476
S R + S P F V+A KKNVL+VNTNSGGHAVIGFYFAKELL+AGH VTI TVG+E S
Sbjct: 57 SLRSSRRSSPQRFTVKAHKKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTIFTVGDESS 116
Query: 477 DKMKKPPFNRFSEIVSGGGKTVWGEPADIGKVLEGATFDVVLDNNGKDLDTVRPVADWAK 656
DKM KPPF+RFSEIVSGGGKTVWG PAD+ V+ TFDVVLDNNGKDLDTVRPV DWAK
Sbjct: 117 DKMNKPPFSRFSEIVSGGGKTVWGNPADVANVVGSETFDVVLDNNGKDLDTVRPVVDWAK 176
Query: 657 SSGVKQFLFISSAGIYKPTDEPPHVEGDTVKADAGHVGVEKYISETFGNWASFRPQYMIG 836
SSG KQFLFISSAGIYK T+EPPHVEGD VKADAGHVGVEKY++ETFGNWASFRPQYMIG
Sbjct: 177 SSGAKQFLFISSAGIYKSTEEPPHVEGDAVKADAGHVGVEKYLAETFGNWASFRPQYMIG 236
Query: 837 SGNNKDCEEWFFDRIVRGRPVLIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAASGNIFNC 1016
SGNNKDCEEWFFDRIVR R V IPGSG+QLTNI+HVRDLSSMLT AV PEAA NIFNC
Sbjct: 237 SGNNKDCEEWFFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVHNPEAACCNIFNC 296
Query: 1017 VSDRAVTLDGMA 1052
VSDRAVTLDGMA
Sbjct: 297 VSDRAVTLDGMA 308
>ref|XP_003518924.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Glycine max]
Length = 403
Score = 425 bits (1092), Expect = e-116
Identities = 205/239 (85%), Positives = 218/239 (91%)
Frame = +3
Query: 336 AVRAEKKNVLVVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGSDKMKKPPFNRFSE 515
A AEKK VL+VNTNSGGHA+IGFYFAKELL AGH VTILTVGEEGSDKMKKPPFNRFSE
Sbjct: 71 ASAAEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGEEGSDKMKKPPFNRFSE 130
Query: 516 IVSGGGKTVWGEPADIGKVLEGATFDVVLDNNGKDLDTVRPVADWAKSSGVKQFLFISSA 695
IVS GG+TVWG PA++G V+ G FDVVLDNNGKDL+TVRPV DWAKSSGVKQFLF+SSA
Sbjct: 131 IVSAGGRTVWGNPAEVGSVVGGEVFDVVLDNNGKDLETVRPVIDWAKSSGVKQFLFVSSA 190
Query: 696 GIYKPTDEPPHVEGDTVKADAGHVGVEKYISETFGNWASFRPQYMIGSGNNKDCEEWFFD 875
GIYKPTDEPPHVEGD VKADAGHV VEKYI ETFG+WA FRPQYMIGSGNNKDCEEWFFD
Sbjct: 191 GIYKPTDEPPHVEGDVVKADAGHVEVEKYIEETFGSWAVFRPQYMIGSGNNKDCEEWFFD 250
Query: 876 RIVRGRPVLIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAASGNIFNCVSDRAVTLDGMA 1052
RIVR RPV IPGSG+QL+NIAHVRDLSSMLTLAVE PEAA+ IFNCVSDRAVTLDG+A
Sbjct: 251 RIVRDRPVPIPGSGLQLSNIAHVRDLSSMLTLAVENPEAANQTIFNCVSDRAVTLDGIA 309
>ref|XP_006444077.1| hypothetical protein CICLE_v10020449mg [Citrus clementina]
gi|568852108|ref|XP_006479722.1| PREDICTED: chloroplast
stem-loop binding protein of 41 kDa a, chloroplastic-like
[Citrus sinensis] gi|557546339|gb|ESR57317.1|
hypothetical protein CICLE_v10020449mg [Citrus
clementina]
Length = 401
Score = 424 bits (1091), Expect = e-116
Identities = 211/254 (83%), Positives = 223/254 (87%)
Frame = +3
Query: 291 AKSPRRTVSSFPPSFAVRAEKKNVLVVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEE 470
A S R +VS+F A AEKK VL+VNTNSGGHAVIGFY AKELL +GH VTI+TVG+E
Sbjct: 55 ASSRRSSVSAFTVK-ASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE 113
Query: 471 GSDKMKKPPFNRFSEIVSGGGKTVWGEPADIGKVLEGATFDVVLDNNGKDLDTVRPVADW 650
SDKMKKPPFNRF+EIVS GGKTVWG+PA++G V+ G TFDVVLDNNGK+LD VRPVADW
Sbjct: 114 NSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADW 173
Query: 651 AKSSGVKQFLFISSAGIYKPTDEPPHVEGDTVKADAGHVGVEKYISETFGNWASFRPQYM 830
AKSSGVKQFLFISSAGIYKP DEPPHVEGD VK DAGHV VEKYISE F NWASFRPQYM
Sbjct: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYM 233
Query: 831 IGSGNNKDCEEWFFDRIVRGRPVLIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAASGNIF 1010
IGSGNNKDCEEWFFDRIVR RPV IPGSGMQ TNIAHVRDLSSMLTLAVE PEAAS NIF
Sbjct: 234 IGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
Query: 1011 NCVSDRAVTLDGMA 1052
N VSDRAVTLDGMA
Sbjct: 294 NLVSDRAVTLDGMA 307
>ref|XP_004955807.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Setaria italica]
Length = 397
Score = 423 bits (1088), Expect = e-116
Identities = 205/251 (81%), Positives = 224/251 (89%), Gaps = 1/251 (0%)
Frame = +3
Query: 303 RRTVSSFPPSFAVRAE-KKNVLVVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGSD 479
RR + + +VRAE KK+VL+VNTNSGGHAVIGFYFAKELLAAGH VT+LTVG+EGSD
Sbjct: 50 RRAAPAARAAVSVRAEAKKSVLIVNTNSGGHAVIGFYFAKELLAAGHAVTVLTVGDEGSD 109
Query: 480 KMKKPPFNRFSEIVSGGGKTVWGEPADIGKVLEGATFDVVLDNNGKDLDTVRPVADWAKS 659
KMKKPPF+RFSE+ GGKTVWG+PAD+G + GA+FDVVLDNNGKDLD V+PVADWAK+
Sbjct: 110 KMKKPPFSRFSELTGAGGKTVWGDPADVGAAVSGASFDVVLDNNGKDLDAVKPVADWAKA 169
Query: 660 SGVKQFLFISSAGIYKPTDEPPHVEGDTVKADAGHVGVEKYISETFGNWASFRPQYMIGS 839
SGV QFLFISSAGIYKPTDEPPHVEGD VK AGHVGVEKYI+E F +WASFRPQYMIGS
Sbjct: 170 SGVGQFLFISSAGIYKPTDEPPHVEGDAVKESAGHVGVEKYIAEQFSSWASFRPQYMIGS 229
Query: 840 GNNKDCEEWFFDRIVRGRPVLIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAASGNIFNCV 1019
GNNKDCEEWFFDRIVRGRPV IPG+GMQLTNIAHVRDLSSML LAVE P AA+G IFNCV
Sbjct: 230 GNNKDCEEWFFDRIVRGRPVPIPGNGMQLTNIAHVRDLSSMLALAVENPGAAAGKIFNCV 289
Query: 1020 SDRAVTLDGMA 1052
SDRAVTLDGMA
Sbjct: 290 SDRAVTLDGMA 300
>gb|EOX94778.1| Chloroplast stem-loop binding protein of 41 kDa isoform 2 [Theobroma
cacao]
Length = 393
Score = 423 bits (1087), Expect = e-116
Identities = 210/246 (85%), Positives = 221/246 (89%), Gaps = 3/246 (1%)
Frame = +3
Query: 324 PPSFAVRA---EKKNVLVVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGSDKMKKP 494
P SF V+A EKK VL+VNTNSGGHAVIGFYFAKELL +GH VTILTVG+EGSDKMKKP
Sbjct: 61 PSSFTVKASGGEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGDEGSDKMKKP 120
Query: 495 PFNRFSEIVSGGGKTVWGEPADIGKVLEGATFDVVLDNNGKDLDTVRPVADWAKSSGVKQ 674
PFNRFSEIVS GGKTVWG+PAD+GKV+ GATFDVVLDNNGKDLDTVRPV DWAKSSGV Q
Sbjct: 121 PFNRFSEIVSAGGKTVWGDPADVGKVVAGATFDVVLDNNGKDLDTVRPVIDWAKSSGVDQ 180
Query: 675 FLFISSAGIYKPTDEPPHVEGDTVKADAGHVGVEKYISETFGNWASFRPQYMIGSGNNKD 854
FL+ISSAGIYKPTDEPPHVEGD VKADAGHVGVEKYI+E F +WA FRPQYMIGSGNNKD
Sbjct: 181 FLYISSAGIYKPTDEPPHVEGDVVKADAGHVGVEKYIAEIFSSWAIFRPQYMIGSGNNKD 240
Query: 855 CEEWFFDRIVRGRPVLIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAASGNIFNCVSDRAV 1034
CEEWFFD + IPGSGMQLTNIAHVRDLSSMLTLAVEKPEAAS NIFNCVSDRAV
Sbjct: 241 CEEWFFD-------LPIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAASSNIFNCVSDRAV 293
Query: 1035 TLDGMA 1052
TLDGMA
Sbjct: 294 TLDGMA 299
>ref|XP_003536518.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Glycine max]
Length = 404
Score = 421 bits (1082), Expect = e-115
Identities = 204/239 (85%), Positives = 216/239 (90%)
Frame = +3
Query: 336 AVRAEKKNVLVVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGSDKMKKPPFNRFSE 515
A AEKK VL+VNTNSGGHA+IGFYFAKELL AGH VTILTVG+EGSDKMKKPPFNRFSE
Sbjct: 72 ASAAEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGDEGSDKMKKPPFNRFSE 131
Query: 516 IVSGGGKTVWGEPADIGKVLEGATFDVVLDNNGKDLDTVRPVADWAKSSGVKQFLFISSA 695
IVS GG+TVWG PA +G V+ G FDVVLDNNGKDL TVRPV DWAKSSGVKQFLFISSA
Sbjct: 132 IVSAGGRTVWGNPAQVGSVVGGEVFDVVLDNNGKDLGTVRPVIDWAKSSGVKQFLFISSA 191
Query: 696 GIYKPTDEPPHVEGDTVKADAGHVGVEKYISETFGNWASFRPQYMIGSGNNKDCEEWFFD 875
GIYKPTDEPPHVEGD VKADAGHV VEKYI ET+G+WA FRPQYMIGSGNNKDCEEWFFD
Sbjct: 192 GIYKPTDEPPHVEGDVVKADAGHVEVEKYIEETYGSWAVFRPQYMIGSGNNKDCEEWFFD 251
Query: 876 RIVRGRPVLIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAASGNIFNCVSDRAVTLDGMA 1052
RIVR RPV IPGSG+QL+NIAHVRDLSSMLTLAVE PEAA+ IFNCVSDRAVTLDG+A
Sbjct: 252 RIVRDRPVPIPGSGLQLSNIAHVRDLSSMLTLAVENPEAANQTIFNCVSDRAVTLDGIA 310