BLASTX nr result
ID: Rehmannia25_contig00006040
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00006040
(987 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS73675.1| hypothetical protein M569_01080 [Genlisea aurea] 369 1e-99
ref|XP_004232547.1| PREDICTED: pentatricopeptide repeat-containi... 368 2e-99
ref|XP_006340813.1| PREDICTED: pentatricopeptide repeat-containi... 364 2e-98
emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera] 313 8e-83
gb|EOX90708.1| Tetratricopeptide repeat (TPR)-like superfamily p... 310 7e-82
ref|XP_006467049.1| PREDICTED: pentatricopeptide repeat-containi... 301 3e-79
ref|XP_006425315.1| hypothetical protein CICLE_v10025555mg [Citr... 297 4e-78
ref|XP_002521681.1| pentatricopeptide repeat-containing protein,... 288 2e-75
ref|XP_003626687.1| Pentatricopeptide repeat-containing protein ... 287 5e-75
ref|XP_004287745.1| PREDICTED: pentatricopeptide repeat-containi... 284 4e-74
ref|XP_004510105.1| PREDICTED: pentatricopeptide repeat-containi... 280 8e-73
gb|EMJ05384.1| hypothetical protein PRUPE_ppa015299mg [Prunus pe... 276 7e-72
ref|XP_002884075.1| pentatricopeptide repeat-containing protein ... 273 6e-71
ref|XP_006409268.1| hypothetical protein EUTSA_v10022683mg [Eutr... 273 1e-70
ref|NP_973481.1| pentatricopeptide repeat-containing protein [Ar... 272 2e-70
ref|NP_565422.1| pentatricopeptide repeat-containing protein [Ar... 272 2e-70
gb|AAM62704.1| unknown [Arabidopsis thaliana] 271 3e-70
ref|XP_002306437.1| pentatricopeptide repeat-containing family p... 270 5e-70
gb|EXC35267.1| hypothetical protein L484_026589 [Morus notabilis] 268 2e-69
ref|XP_003595941.1| Pentatricopeptide repeat-containing protein ... 267 4e-69
>gb|EPS73675.1| hypothetical protein M569_01080 [Genlisea aurea]
Length = 469
Score = 369 bits (946), Expect = 1e-99
Identities = 189/308 (61%), Positives = 223/308 (72%), Gaps = 2/308 (0%)
Frame = +3
Query: 69 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKPSKK--NPIKNDDSK 242
MGK+PP FR A+ +LLKP S + +P + TQK SK+ P K DS
Sbjct: 1 MGKVPPIFRMTAT-----SLLKPKVSGVRTKDVPD-LPALLTQKVDSKRVRRPQKKSDST 54
Query: 243 TKSNVPSITFESPNLSEAKSLFNSLISSTKNLPSDSSFYNXXXXXXXXXXXXXXXXXXFN 422
K +V SI FES NL++AKSLFNSL+S +P D +F N N
Sbjct: 55 PKIDVSSIAFESSNLADAKSLFNSLVSGGAGIPRDPNFCNSILQSFSSVATPQDSIMFLN 114
Query: 423 HMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRS 602
HM+KKHP+F PNR TY+ LL QSCSS DE+S+S VH ILNLM ++GFPPNQ S +AVR+
Sbjct: 115 HMLKKHPSFSPNRLTYNILLKQSCSSADEQSVSGVHGILNLMKDSGFPPNQSSASIAVRA 174
Query: 603 LCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPD 782
LC GREEHA+EL+KELS KN PD +TYN LV+HLVKNRSLS+VNCF+KDMREFG+KP
Sbjct: 175 LCESGREEHAVELVKELSTKNLPPDEHTYNTLVKHLVKNRSLSSVNCFVKDMREFGVKPT 234
Query: 783 LVTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVYK 962
L+TYTIMIDNVCNSKNLREA RLL VLSEEGYKPD YVYNTIMKGYC L+QGG+VLGVYK
Sbjct: 235 LITYTIMIDNVCNSKNLREAMRLLSVLSEEGYKPDRYVYNTIMKGYCTLNQGGEVLGVYK 294
Query: 963 KMQEEGVE 986
KMQ+E +E
Sbjct: 295 KMQDERIE 302
Score = 95.5 bits (236), Expect = 3e-17
Identities = 73/287 (25%), Positives = 123/287 (42%)
Frame = +3
Query: 126 LLKPNTSAALQEQIPSPISNFPTQKKPSKKNPIKNDDSKTKSNVPSITFESPNLSEAKSL 305
LLK + S+A EQ S + K S P + + S ES A L
Sbjct: 133 LLKQSCSSA-DEQSVSGVHGILNLMKDSGFPP----NQSSASIAVRALCESGREEHAVEL 187
Query: 306 FNSLISSTKNLPSDSSFYNXXXXXXXXXXXXXXXXXXFNHMVKKHPAFCPNRFTYHTLLV 485
L STKNLP D YN M + P TY ++
Sbjct: 188 VKEL--STKNLPPDEHTYNTLVKHLVKNRSLSSVNCFVKDM--REFGVKPTLITYTIMID 243
Query: 486 QSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHAIELIKELSAKN 665
C+S ++L R+L++++ G+ P++ + ++ C + + + K++ +
Sbjct: 244 NVCNS---KNLREAMRLLSVLSEEGYKPDRYVYNTIMKGYCTLNQGGEVLGVYKKMQDER 300
Query: 666 SQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDNVCNSKNLREAT 845
+PD TYN L+ L K+ S F+ M E G+ PD+ TYT +++ +C N+ EA
Sbjct: 301 IEPDNVTYNTLIFGLCKSGRWSYAKKFLGVMNEKGLSPDVFTYTSLMNGMCRGGNISEAM 360
Query: 846 RLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVYKKMQEEGVE 986
LL + KP+ + YNT+++G C + V++ M+ +E
Sbjct: 361 ALLEEMESRECKPNSHTYNTLLQGLCKAGMLDKAVEVFQVMKNGSIE 407
Score = 61.2 bits (147), Expect = 6e-07
Identities = 33/165 (20%), Positives = 74/165 (44%)
Frame = +3
Query: 429 VKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLC 608
V + P+R+ Y+T++ C+ + V++ M + P+ V+ + + LC
Sbjct: 260 VLSEEGYKPDRYVYNTIMKGYCTLNQGGEVLGVYK---KMQDERIEPDNVTYNTLIFGLC 316
Query: 609 GCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLV 788
GR +A + + ++ K PD +TY L+ + + ++S +++M KP+
Sbjct: 317 KSGRWSYAKKFLGVMNEKGLSPDVFTYTSLMNGMCRGGNISEAMALLEEMESRECKPNSH 376
Query: 789 TYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYC 923
TY ++ +C + L +A + V+ + Y + ++ C
Sbjct: 377 TYNTLLQGLCKAGMLDKAVEVFQVMKNGSIELGTGSYGSFLRALC 421
>ref|XP_004232547.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like [Solanum lycopersicum]
Length = 469
Score = 368 bits (944), Expect = 2e-99
Identities = 196/314 (62%), Positives = 231/314 (73%), Gaps = 8/314 (2%)
Frame = +3
Query: 69 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKP-----SKKNPIKND 233
MGK+PP+ R A ++TL+K + PSP + P KP ++P K
Sbjct: 1 MGKLPPSLRSA--NFAVNTLIKTPS--------PSPSPSPPPTSKPHYYPKKSQSPKKKP 50
Query: 234 DSKTKSNVPS--ITFESPNLSEAKSLFNSLISSTKNLPSDSSFYNXXXXXXXXXXXXXXX 407
S T+ +PS + F+S +LS+AK+LFNSLISST+N +D+ FYN
Sbjct: 51 TSITEPQLPSSILAFDSTSLSDAKTLFNSLISSTRNPSTDNKFYNAVLQSFSSNSTLQDS 110
Query: 408 XXXFNHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTD 587
NHM+K HP F P+RFTYH LLVQSC S D SLS VH++LNLMT NGFPPN+VSTD
Sbjct: 111 IFFLNHMIKVHPPFSPDRFTYHVLLVQSCKSVDL-SLSPVHQVLNLMTTNGFPPNKVSTD 169
Query: 588 VAVRSLCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMRE- 764
+AVR+LC G EE AIEL+KELS+K+S PDTYTYNF++RHL KNR LST+N FIK+MRE
Sbjct: 170 IAVRTLCSSGHEEQAIELVKELSSKDSPPDTYTYNFIIRHLCKNRPLSTMNNFIKEMREG 229
Query: 765 FGIKPDLVTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGD 944
F IKPDLVTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGG+
Sbjct: 230 FDIKPDLVTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGE 289
Query: 945 VLGVYKKMQEEGVE 986
VLGVYKKMQEEGV+
Sbjct: 290 VLGVYKKMQEEGVK 303
Score = 77.0 bits (188), Expect = 1e-11
Identities = 46/181 (25%), Positives = 88/181 (48%), Gaps = 3/181 (1%)
Frame = +3
Query: 453 PNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHA 632
P+ TY ++ C+S ++L R+L +++ G+ P+ + ++ C +
Sbjct: 234 PDLVTYTIMIDNVCNS---KNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGEV 290
Query: 633 IELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDN 812
+ + K++ + +PD TYN L+ L K+ + F+ M E G PD VTYT +++
Sbjct: 291 LGVYKKMQEEGVKPDLVTYNTLIYGLSKSGRVKDAKKFLNVMMEEGHVPDAVTYTSLMNG 350
Query: 813 VCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYC---MLSQGGDVLGVYKKMQEEGV 983
+C + A LL + G P+ YNT++ G C +L +G + +Y M++ G
Sbjct: 351 MCREADPLGAVALLEKMEARGCAPNSCTYNTLLHGLCKGRLLDKG---MKLYDVMKQNGT 407
Query: 984 E 986
+
Sbjct: 408 K 408
>ref|XP_006340813.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like [Solanum tuberosum]
Length = 467
Score = 364 bits (935), Expect = 2e-98
Identities = 194/314 (61%), Positives = 229/314 (72%), Gaps = 8/314 (2%)
Frame = +3
Query: 69 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKP-----SKKNPIKND 233
MGK+PP+ R A ++TL+K PSP + P KP + P K
Sbjct: 1 MGKLPPSLRSA--NFAVNTLIKT----------PSPSPSPPPTSKPHYYPKKSQTPKKKL 48
Query: 234 DSKTKSNVPS--ITFESPNLSEAKSLFNSLISSTKNLPSDSSFYNXXXXXXXXXXXXXXX 407
S T+ +PS + F+S +LS+AK+LFNSLIS+++N SD+ FYN
Sbjct: 49 TSNTEPQLPSSIVAFDSTSLSDAKTLFNSLISNSRNPTSDNKFYNAVLQSFSSNSTLQDS 108
Query: 408 XXXFNHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTD 587
NH++K HP F P+RFTYH LL+QSC S D SLS VH++LNLMT NGFPPN+VSTD
Sbjct: 109 IFFLNHVIKVHPPFSPDRFTYHVLLIQSCKSVDL-SLSPVHQVLNLMTTNGFPPNKVSTD 167
Query: 588 VAVRSLCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMRE- 764
+AVR+LC G EE AIEL+KELS+K+S PDTYTYNF+VRHL KNR LST+N FIK+MRE
Sbjct: 168 IAVRTLCSSGHEEQAIELVKELSSKDSPPDTYTYNFIVRHLCKNRPLSTMNNFIKEMREG 227
Query: 765 FGIKPDLVTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGD 944
F IKPDLVTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGG+
Sbjct: 228 FDIKPDLVTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGE 287
Query: 945 VLGVYKKMQEEGVE 986
VLGVYKKMQEEGV+
Sbjct: 288 VLGVYKKMQEEGVK 301
Score = 76.3 bits (186), Expect = 2e-11
Identities = 45/174 (25%), Positives = 84/174 (48%), Gaps = 3/174 (1%)
Frame = +3
Query: 453 PNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHA 632
P+ TY ++ C+S ++L R+L +++ G+ P+ + ++ C +
Sbjct: 232 PDLVTYTIMIDNVCNS---KNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGEV 288
Query: 633 IELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDN 812
+ + K++ + +PD TYN L+ L K+ + F+ M E G PD VTYT +++
Sbjct: 289 LGVYKKMQEEGVKPDLVTYNTLIYGLSKSGRVKDAKKFLNVMMEEGHVPDAVTYTSLMNG 348
Query: 813 VCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYC---MLSQGGDVLGVYKK 965
+C + A LL + G P+ YNT++ G C +L +G + V K+
Sbjct: 349 MCREADPLGAVALLEKMEARGCAPNSCTYNTLLHGLCKGRLLDKGMKLYDVMKQ 402
>emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]
Length = 472
Score = 313 bits (801), Expect = 8e-83
Identities = 168/312 (53%), Positives = 210/312 (67%), Gaps = 6/312 (1%)
Frame = +3
Query: 69 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQ-----IPSPISNFPTQKKPSKKNPIKND 233
MGKIPP+FR S P++TLLK N A L +Q P +FP +K+P K
Sbjct: 1 MGKIPPSFR--TSTVPVTTLLK-NPPAVLPKQSTVLETPQKPHHFP-KKRPQPSGKTKKT 56
Query: 234 DSKTKSNVPSITFESPNLSEAKSLFNSLISSTKNLPSDSSFYNXXXXXXXXXXXXXXXXX 413
+ + + F SPNL +AK LF S I++T P D F+N
Sbjct: 57 RTPIEDPKSPVIFNSPNLLDAKKLFAS-ITTTSTTPLDLRFHNALLQSYSSISTVNDSIS 115
Query: 414 XFNHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVA 593
HM+K P+F P R TYH LL QSC SP+ + LS VH+ LNLM +GFPP++V+TD+A
Sbjct: 116 FLRHMIKSQPSFSPERSTYHILLSQSCKSPNSD-LSAVHQTLNLMVTHGFPPDRVTTDIA 174
Query: 594 VRSLCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMRE-FG 770
VRSLC GREEHAIEL+KELS K+S PD++TYNF++RHL K R+LSTV FI +++ F
Sbjct: 175 VRSLCSAGREEHAIELVKELSLKHSPPDSFTYNFIIRHLCKTRALSTVYNFIDELQNSFQ 234
Query: 771 IKPDLVTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVL 950
+KPDLVTYTI+IDNVCN KNLREATRLL VL E G+KPDCYVYNTIMKGYC+L +G + +
Sbjct: 235 LKPDLVTYTILIDNVCNGKNLREATRLLEVLGEAGFKPDCYVYNTIMKGYCILDKGSEAI 294
Query: 951 GVYKKMQEEGVE 986
GVYKKM+EEGVE
Sbjct: 295 GVYKKMKEEGVE 306
Score = 85.5 bits (210), Expect = 3e-14
Identities = 46/178 (25%), Positives = 94/178 (52%), Gaps = 2/178 (1%)
Frame = +3
Query: 453 PNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNN-GFPPNQVSTDVAVRSLCGCGREEH 629
P+ FTY+ ++ C + +LS V+ ++ + N+ P+ V+ + + ++C
Sbjct: 201 PDSFTYNFIIRHLCKT---RALSTVYNFIDELQNSFQLKPDLVTYTILIDNVCNGKNLRE 257
Query: 630 AIELIKELSAKNSQPDTYTYNFLVR-HLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMI 806
A L++ L +PD Y YN +++ + + ++ + + K M+E G++PDLVTY +I
Sbjct: 258 ATRLLEVLGEAGFKPDCYVYNTIMKGYCILDKGSEAIGVY-KKMKEEGVEPDLVTYNTLI 316
Query: 807 DNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVYKKMQEEG 980
+ S ++EA + L +++E G+ PD Y ++M G C L + ++M+ +G
Sbjct: 317 FGLSKSGRVKEARKFLDIMAEMGHFPDAVTYTSLMNGLCREGNALGALALLEEMEAKG 374
Score = 84.7 bits (208), Expect = 5e-14
Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 3/173 (1%)
Frame = +3
Query: 453 PNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHA 632
P+ TY L+ C+ ++L R+L ++ GF P+ + ++ C + A
Sbjct: 237 PDLVTYTILIDNVCNG---KNLREATRLLEVLGEAGFKPDCYVYNTIMKGYCILDKGSEA 293
Query: 633 IELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDN 812
I + K++ + +PD TYN L+ L K+ + F+ M E G PD VTYT +++
Sbjct: 294 IGVYKKMKEEGVEPDLVTYNTLIFGLSKSGRVKEARKFLDIMAEMGHFPDAVTYTSLMNG 353
Query: 813 VCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYC---MLSQGGDVLGVYK 962
+C N A LL + +G P+ YNT++ G C ML +G ++ GV K
Sbjct: 354 LCREGNALGALALLEEMEAKGCSPNSCTYNTLLHGLCKLRMLERGIELYGVMK 406
>gb|EOX90708.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 464
Score = 310 bits (793), Expect = 7e-82
Identities = 167/307 (54%), Positives = 210/307 (68%), Gaps = 1/307 (0%)
Frame = +3
Query: 69 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKPSKKNPIKNDDSKTK 248
MGKIPP+FR A S S + + +A IP T+K+PS+ + K +
Sbjct: 1 MGKIPPSFRPAISNSLIKRQPLESPTA-----IPHQFPEKTTKKRPSQHS--KTAQASLG 53
Query: 249 SNVPSITFESPNLSEAKSLFNSLISSTKNLPSDSSFYNXXXXXXXXXXXXXXXXXXFNHM 428
S F+SP+LS AK +FNS++ +TK P D F+N +HM
Sbjct: 54 SRKAEPLFKSPDLSSAKKVFNSIVVTTK-APIDLRFHNTLLQSYASVSTVNDSISFLHHM 112
Query: 429 VKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLC 608
VK HP+F P+R TYH LL QSC +PD SLS V + LNLM NG PNQV+TDVA+RSLC
Sbjct: 113 VKAHPSFSPDRSTYHILLSQSCKAPDS-SLSPVRQTLNLMVTNGLKPNQVTTDVAIRSLC 171
Query: 609 GCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMRE-FGIKPDL 785
GR +HA+EL+KELS K+S PD +T+NFLV++L K R+LSTV FI DM+ FGIKPDL
Sbjct: 172 EAGRIDHAVELVKELSLKHSPPDNFTFNFLVKNLCKCRTLSTVYGFIDDMKSSFGIKPDL 231
Query: 786 VTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVYKK 965
VTYTI+IDNVCNSKNLREA RL+GVL+E G+KPDC+VYNTIMKGYCMLS+G +++ VYKK
Sbjct: 232 VTYTILIDNVCNSKNLREAMRLVGVLNESGFKPDCFVYNTIMKGYCMLSKGSEIIEVYKK 291
Query: 966 MQEEGVE 986
M+EEGVE
Sbjct: 292 MKEEGVE 298
Score = 82.4 bits (202), Expect = 2e-13
Identities = 47/177 (26%), Positives = 86/177 (48%)
Frame = +3
Query: 453 PNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHA 632
P+ TY L+ C+S ++L R++ ++ +GF P+ + ++ C +
Sbjct: 229 PDLVTYTILIDNVCNS---KNLREAMRLVGVLNESGFKPDCFVYNTIMKGYCMLSKGSEI 285
Query: 633 IELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDN 812
IE+ K++ + +PD TYN L+ L K+ + ++ M E G PD VTYT +++
Sbjct: 286 IEVYKKMKEEGVEPDLVTYNTLIFGLSKSGRVKEARKYLDIMVESGHFPDAVTYTSLMNG 345
Query: 813 VCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVYKKMQEEGV 983
+C N A LL + +G P+ YNT++ G C + +Y+ M+ G+
Sbjct: 346 MCREGNALGAVLLLEEMERKGCSPNSCTYNTLLHGLCKGRLMEKGMELYRAMKSAGM 402
>ref|XP_006467049.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like isoform X1 [Citrus sinensis]
gi|568825365|ref|XP_006467050.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17670-like isoform X2 [Citrus sinensis]
gi|568825367|ref|XP_006467051.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17670-like isoform X3 [Citrus sinensis]
Length = 465
Score = 301 bits (771), Expect = 3e-79
Identities = 161/307 (52%), Positives = 206/307 (67%), Gaps = 1/307 (0%)
Frame = +3
Query: 69 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKPSKKNPIKNDDSKTK 248
MGKIPPA R A S + L L P + AL+ SP + PSKK+ N K K
Sbjct: 1 MGKIPPALRTAISSNNL--LKTPAPTQALK----SPHQFLYKNENPSKKSAAANKSEK-K 53
Query: 249 SNVPSITFESPNLSEAKSLFNSLISSTKNLPSDSSFYNXXXXXXXXXXXXXXXXXXFNHM 428
+ P++ F+SP LSEA +FNSL+++T P D +F+N NHM
Sbjct: 54 TPAPAVIFKSPELSEAIKIFNSLVTATMQTPRDRTFHNSLLQSYASISTVDDSISLLNHM 113
Query: 429 VKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLC 608
+K +P+F P+R TYH LL QSC +PD S S++ + L+LMT NG+PPNQ +TD+AVRSLC
Sbjct: 114 IKANPSFNPDRSTYHILLAQSCQAPDN-SFSSIRKTLSLMTTNGYPPNQGTTDIAVRSLC 172
Query: 609 GCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMR-EFGIKPDL 785
R + AIEL+K LS + PD +TYNFLV+ L K RSL+TV F+ MR GIKP+L
Sbjct: 173 SVNRLDDAIELVKGLSLNSFPPDIFTYNFLVKCLCKCRSLTTVYNFVDQMRASLGIKPNL 232
Query: 786 VTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVYKK 965
VTYTI+IDNVCN+KNLREA RL+ LS+ G+KPDC+VYNTIMKGYC LS+GG+V+GVY K
Sbjct: 233 VTYTILIDNVCNTKNLREAMRLVSALSDSGFKPDCFVYNTIMKGYCNLSRGGEVIGVYNK 292
Query: 966 MQEEGVE 986
M+EEGVE
Sbjct: 293 MKEEGVE 299
Score = 85.1 bits (209), Expect = 4e-14
Identities = 49/178 (27%), Positives = 88/178 (49%)
Frame = +3
Query: 453 PNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHA 632
PN TY L+ C++ ++L R+++ ++++GF P+ + ++ C R
Sbjct: 230 PNLVTYTILIDNVCNT---KNLREAMRLVSALSDSGFKPDCFVYNTIMKGYCNLSRGGEV 286
Query: 633 IELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDN 812
I + ++ + +PD TYN L+ L K + F+K M E G PD VTYT +++
Sbjct: 287 IGVYNKMKEEGVEPDLVTYNTLIFGLSKCGRVGEAKKFLKIMVEAGFLPDAVTYTSLMNG 346
Query: 813 VCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVYKKMQEEGVE 986
+C + A LL + +G P+ YNT++ G C + +Y+ M+E GV+
Sbjct: 347 MCREGDALGALALLEEMEGKGCSPNSCTYNTLLYGLCKSRLMEKGIELYRAMKEGGVK 404
Score = 62.8 bits (151), Expect = 2e-07
Identities = 52/211 (24%), Positives = 84/211 (39%), Gaps = 2/211 (0%)
Frame = +3
Query: 282 NLSEAKSLFNSLISSTKNLPSDSSFYNXXXXXXXXXXXXXXXXXXFNHMVKKHPAFCPNR 461
NL EA L ++L S D YN +N M K P+
Sbjct: 247 NLREAMRLVSAL--SDSGFKPDCFVYNTIMKGYCNLSRGGEVIGVYNKM--KEEGVEPDL 302
Query: 462 FTYHTLL--VQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHAI 635
TY+TL+ + C E + L +M GF P+ V+ + +C G A+
Sbjct: 303 VTYNTLIFGLSKCGRVGEAK-----KFLKIMVEAGFLPDAVTYTSLMNGMCREGDALGAL 357
Query: 636 ELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDNV 815
L++E+ K P++ TYN L+ L K+R + + M+E G+K + Y ++ +
Sbjct: 358 ALLEEMEGKGCSPNSCTYNTLLYGLCKSRLMEKGIELYRAMKEGGVKLETAAYATLVRAL 417
Query: 816 CNSKNLREATRLLGVLSEEGYKPDCYVYNTI 908
C + EA + E D Y T+
Sbjct: 418 CRHGKVAEAYEVFDYAVESKSLTDVAAYTTL 448
Score = 62.4 bits (150), Expect = 3e-07
Identities = 37/159 (23%), Positives = 69/159 (43%)
Frame = +3
Query: 447 FCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREE 626
F P+ F Y+T++ C+ + V+ N M G P+ V+ + + L CGR
Sbjct: 263 FKPDCFVYNTIMKGYCNLSRGGEVIGVY---NKMKEEGVEPDLVTYNTLIFGLSKCGRVG 319
Query: 627 HAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMI 806
A + +K + PD TY L+ + + +++M G P+ TY ++
Sbjct: 320 EAKKFLKIMVEAGFLPDAVTYTSLMNGMCREGDALGALALLEEMEGKGCSPNSCTYNTLL 379
Query: 807 DNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYC 923
+C S+ + + L + E G K + Y T+++ C
Sbjct: 380 YGLCKSRLMEKGIELYRAMKEGGVKLETAAYATLVRALC 418
>ref|XP_006425315.1| hypothetical protein CICLE_v10025555mg [Citrus clementina]
gi|557527305|gb|ESR38555.1| hypothetical protein
CICLE_v10025555mg [Citrus clementina]
Length = 465
Score = 297 bits (761), Expect = 4e-78
Identities = 157/307 (51%), Positives = 203/307 (66%), Gaps = 1/307 (0%)
Frame = +3
Query: 69 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKPSKKNPIKNDDSKTK 248
MGKIPPA R A S + L + A + + SP + SKK+ N K K
Sbjct: 1 MGKIPPALRTAISSNTL------RKTPARTQALKSPHQFLNKNENRSKKSAAANKSEK-K 53
Query: 249 SNVPSITFESPNLSEAKSLFNSLISSTKNLPSDSSFYNXXXXXXXXXXXXXXXXXXFNHM 428
+ P+ F+SP LSEA +FNSL+++T P D +F+N NHM
Sbjct: 54 TPAPAAIFKSPELSEAIKIFNSLVTATMQTPRDRTFHNSLLQSYASISTVDDSISLLNHM 113
Query: 429 VKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLC 608
+K +P+F P+R TYH LL QSC +PD S S++ + L+LMT NG+PPNQ +TD+AVRSLC
Sbjct: 114 IKANPSFNPDRSTYHILLAQSCQAPDN-SFSSIRKTLSLMTTNGYPPNQGTTDIAVRSLC 172
Query: 609 GCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMR-EFGIKPDL 785
R + AIEL+K LS + PD +TYNFLV+ L K RSL+TV F+ +R FGIKP+L
Sbjct: 173 SVNRLDDAIELVKGLSLNSFPPDIFTYNFLVKCLCKCRSLTTVYNFVDQVRASFGIKPNL 232
Query: 786 VTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVYKK 965
VTYTI+IDNVCN+KNLREA RL+ LS+ G+KPDC+VYNTIMKGYC LS+GG+V+GVY K
Sbjct: 233 VTYTILIDNVCNTKNLREAMRLVSALSDSGFKPDCFVYNTIMKGYCNLSRGGEVIGVYNK 292
Query: 966 MQEEGVE 986
M+EEGVE
Sbjct: 293 MKEEGVE 299
Score = 84.3 bits (207), Expect = 6e-14
Identities = 48/178 (26%), Positives = 88/178 (49%)
Frame = +3
Query: 453 PNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHA 632
PN TY L+ C++ ++L R+++ ++++GF P+ + ++ C R
Sbjct: 230 PNLVTYTILIDNVCNT---KNLREAMRLVSALSDSGFKPDCFVYNTIMKGYCNLSRGGEV 286
Query: 633 IELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDN 812
I + ++ + +PD TYN ++ L K + F+K M E G PD VTYT +++
Sbjct: 287 IGVYNKMKEEGVEPDLVTYNTMIFGLSKCGRVGEAKKFLKIMVEAGFLPDAVTYTSLMNG 346
Query: 813 VCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVYKKMQEEGVE 986
+C + A LL + +G P+ YNT++ G C + +Y+ M+E GV+
Sbjct: 347 MCREGDALGALALLEEMEGKGCSPNSCTYNTLLYGLCKSRLMEKGIELYRAMKEGGVK 404
Score = 62.4 bits (150), Expect = 3e-07
Identities = 37/159 (23%), Positives = 69/159 (43%)
Frame = +3
Query: 447 FCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREE 626
F P+ F Y+T++ C+ + V+ N M G P+ V+ + + L CGR
Sbjct: 263 FKPDCFVYNTIMKGYCNLSRGGEVIGVY---NKMKEEGVEPDLVTYNTMIFGLSKCGRVG 319
Query: 627 HAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMI 806
A + +K + PD TY L+ + + +++M G P+ TY ++
Sbjct: 320 EAKKFLKIMVEAGFLPDAVTYTSLMNGMCREGDALGALALLEEMEGKGCSPNSCTYNTLL 379
Query: 807 DNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYC 923
+C S+ + + L + E G K + Y T+++ C
Sbjct: 380 YGLCKSRLMEKGIELYRAMKEGGVKLETAAYATLVRALC 418
Score = 62.0 bits (149), Expect = 3e-07
Identities = 51/211 (24%), Positives = 84/211 (39%), Gaps = 2/211 (0%)
Frame = +3
Query: 282 NLSEAKSLFNSLISSTKNLPSDSSFYNXXXXXXXXXXXXXXXXXXFNHMVKKHPAFCPNR 461
NL EA L ++L S D YN +N M K P+
Sbjct: 247 NLREAMRLVSAL--SDSGFKPDCFVYNTIMKGYCNLSRGGEVIGVYNKM--KEEGVEPDL 302
Query: 462 FTYHTLL--VQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHAI 635
TY+T++ + C E + L +M GF P+ V+ + +C G A+
Sbjct: 303 VTYNTMIFGLSKCGRVGEAK-----KFLKIMVEAGFLPDAVTYTSLMNGMCREGDALGAL 357
Query: 636 ELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDNV 815
L++E+ K P++ TYN L+ L K+R + + M+E G+K + Y ++ +
Sbjct: 358 ALLEEMEGKGCSPNSCTYNTLLYGLCKSRLMEKGIELYRAMKEGGVKLETAAYATLVRAL 417
Query: 816 CNSKNLREATRLLGVLSEEGYKPDCYVYNTI 908
C + EA + E D Y T+
Sbjct: 418 CRHGKVAEAYEVFDYAVESKSLTDVAAYTTL 448
>ref|XP_002521681.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539072|gb|EEF40668.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 458
Score = 288 bits (738), Expect = 2e-75
Identities = 158/310 (50%), Positives = 204/310 (65%), Gaps = 4/310 (1%)
Frame = +3
Query: 69 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKP---SKKNPIKNDDS 239
MGK+PP+ R A S + L L KPN FP +KP SKK ++
Sbjct: 1 MGKVPPSLRSAVSTTAL--LRKPNP--------------FPPPEKPHYLSKKTKLQLSQK 44
Query: 240 KTKSNVPSITFESPNLSEAKSLFNSLISSTKNLPSDSSFYNXXXXXXXXXXXXXXXXXXF 419
F+SP L+EAK +FNSLIS+T+ +P D F++
Sbjct: 45 IPTPIQQKRLFKSPELNEAKEIFNSLISTTR-VPLDLRFHHSFLQSYSSISTIDDSISLL 103
Query: 420 NHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVR 599
HM+K P+F P TYH LL QSC +PD +LS VH+ILNLM NNGF P QV+ D+AVR
Sbjct: 104 RHMIKTLPSFTPTISTYHILLSQSCKAPDP-TLSPVHQILNLMVNNGFMPTQVTVDIAVR 162
Query: 600 SLCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMRE-FGIK 776
+LC G+E+ A++L+KELS K+S+PD++TYNFLV+ L K R+LS V FI +MR F ++
Sbjct: 163 ALCSAGKEDDAVKLVKELSLKHSKPDSFTYNFLVKCLCKCRALSNVYSFIDEMRSSFDLE 222
Query: 777 PDLVTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGV 956
P+LVTYTI+IDNVCNSKNLREA RLLG+L E G+KPDC+VYNTIMKGYCMLS+G D + V
Sbjct: 223 PNLVTYTILIDNVCNSKNLREAMRLLGILRECGFKPDCFVYNTIMKGYCMLSKGSDAIQV 282
Query: 957 YKKMQEEGVE 986
+KKM+EEG+E
Sbjct: 283 FKKMKEEGIE 292
Score = 85.5 bits (210), Expect = 3e-14
Identities = 51/174 (29%), Positives = 88/174 (50%), Gaps = 3/174 (1%)
Frame = +3
Query: 453 PNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHA 632
PN TY L+ C+S ++L R+L ++ GF P+ + ++ C + A
Sbjct: 223 PNLVTYTILIDNVCNS---KNLREAMRLLGILRECGFKPDCFVYNTIMKGYCMLSKGSDA 279
Query: 633 IELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDN 812
I++ K++ + +PD TYN L+ L K +S ++K M E G PD VTYT +++
Sbjct: 280 IQVFKKMKEEGIEPDLITYNTLIFGLSKGGRVSEAKRYLKIMVESGHFPDAVTYTSLMNG 339
Query: 813 VCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYC---MLSQGGDVLGVYKK 965
+C + A LL + +G P+ YNT++ G C +L +G ++ V K+
Sbjct: 340 LCRKGDALGALALLEDMEMKGCSPNSCTYNTLLYGLCKERLLEKGIELYNVIKE 393
Score = 57.8 bits (138), Expect = 6e-06
Identities = 37/159 (23%), Positives = 64/159 (40%)
Frame = +3
Query: 447 FCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREE 626
F P+ F Y+T++ C S+ ++ M G P+ ++ + + L GR
Sbjct: 256 FKPDCFVYNTIMKGYCMLSKG---SDAIQVFKKMKEEGIEPDLITYNTLIFGLSKGGRVS 312
Query: 627 HAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMI 806
A +K + PD TY L+ L + ++DM G P+ TY ++
Sbjct: 313 EAKRYLKIMVESGHFPDAVTYTSLMNGLCRKGDALGALALLEDMEMKGCSPNSCTYNTLL 372
Query: 807 DNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYC 923
+C + L + L V+ E G D Y T ++ C
Sbjct: 373 YGLCKERLLEKGIELYNVIKEGGMLLDTASYATFVRALC 411
>ref|XP_003626687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355520709|gb|AET01163.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 501
Score = 287 bits (734), Expect = 5e-75
Identities = 153/310 (49%), Positives = 210/310 (67%), Gaps = 4/310 (1%)
Frame = +3
Query: 69 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQ-KKPSKKNPIKNDDSKT 245
MGKIPP+FR A S L + S++L P P +FP + +KP +K + S++
Sbjct: 1 MGKIPPSFRSALSNPNLI-----HRSSSLIPSSPKP-HHFPNKTRKPHQKQ--QQSQSQS 52
Query: 246 KSNVPSITFESPNLSEAKSLFNSLISSTKNLPSDSSFYNXXXXXXXXXXXXXXXXXXFNH 425
+S P F+SPNL EAKS+FNS ++S+ N P DS F+N H
Sbjct: 53 QSPKPVSVFKSPNLQEAKSIFNSFVNSS-NAPIDSRFHNSLLQSYASISTINDSIAFLRH 111
Query: 426 MVKKHPAFCPNRFTYHTLLVQSCSSPDEE--SLSNVHRILNLMTNNGFPPNQVSTDVAVR 599
M K HP+F P++ TYH LL C S D + +LS +H+ LNLM ++G P++ + D+AVR
Sbjct: 112 MTKTHPSFSPDKSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSDGISPDKGTVDLAVR 171
Query: 600 SLCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMR-EFGIK 776
SLC R + A+ELIKELS+K+ PD Y+YNFLV++L K+R+LS V FI +MR +F +K
Sbjct: 172 SLCTADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVYAFIDEMRTKFDVK 231
Query: 777 PDLVTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGV 956
P+LVTYTI+IDNVCN+KNLREATRL+ +L EEG+KPDC++YNTIMKGYCMLS+G + + V
Sbjct: 232 PNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEV 291
Query: 957 YKKMQEEGVE 986
Y +M+E+GVE
Sbjct: 292 YNRMKEKGVE 301
Score = 87.0 bits (214), Expect = 1e-14
Identities = 49/178 (27%), Positives = 86/178 (48%)
Frame = +3
Query: 453 PNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHA 632
PN TY L+ C++ ++L R+++++ GF P+ + ++ C R A
Sbjct: 232 PNLVTYTILIDNVCNT---KNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEA 288
Query: 633 IELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDN 812
IE+ + K +PD TYN L+ L K+ +S ++ M E G PD VTYT +++
Sbjct: 289 IEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNG 348
Query: 813 VCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVYKKMQEEGVE 986
+C A LL + +G P+ YNT++ G C + +Y M+ +G++
Sbjct: 349 MCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLK 406
Score = 70.9 bits (172), Expect = 7e-10
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 1/178 (0%)
Frame = +3
Query: 429 VKKHPAFCPNRFTYHTLLVQSCS-SPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSL 605
+ + F P+ F Y+T++ C S E++ + N M G P+ ++ + + L
Sbjct: 259 ILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIE----VYNRMKEKGVEPDLITYNTLIFGL 314
Query: 606 CGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDL 785
GR A +L++ ++ K PD TY L+ + + +++M G P+
Sbjct: 315 SKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNT 374
Query: 786 VTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVY 959
TY ++ +C S+ +A L G + +G K D Y T ++ C + + D V+
Sbjct: 375 CTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYATFVRALCSVGRVADAYEVF 432
Score = 66.2 bits (160), Expect = 2e-08
Identities = 56/233 (24%), Positives = 93/233 (39%)
Frame = +3
Query: 282 NLSEAKSLFNSLISSTKNLPSDSSFYNXXXXXXXXXXXXXXXXXXFNHMVKKHPAFCPNR 461
NL EA L + L + D YN +N M +K P+
Sbjct: 249 NLREATRLVDIL--EEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKGVE--PDL 304
Query: 462 FTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHAIEL 641
TY+TL+ S +S ++L +M G P++V+ + +C G A+ L
Sbjct: 305 ITYNTLIFGLSKSG---RVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALAL 361
Query: 642 IKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDNVCN 821
++E+ K P+T TYN L+ L K+R M+ G+K D+ +Y + +C+
Sbjct: 362 LEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYATFVRALCS 421
Query: 822 SKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVYKKMQEEG 980
+ +A + E D Y+T+ L +KK +EEG
Sbjct: 422 VGRVADAYEVFDYAVESKSLSDVAAYSTL----------ESTLKWFKKAKEEG 464
>ref|XP_004287745.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like isoform 1 [Fragaria vesca subsp. vesca]
gi|470102614|ref|XP_004287746.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17670-like isoform 2 [Fragaria vesca subsp. vesca]
Length = 450
Score = 284 bits (726), Expect = 4e-74
Identities = 152/306 (49%), Positives = 205/306 (66%)
Frame = +3
Query: 69 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKPSKKNPIKNDDSKTK 248
MGK+ P+ R S S + KP +S+ S+ P K P + ++T+
Sbjct: 1 MGKMSPSVRSLVSTSLIK---KPPSSSP---------SHKPHTHLTGKPPPQNSGKTQTQ 48
Query: 249 SNVPSITFESPNLSEAKSLFNSLISSTKNLPSDSSFYNXXXXXXXXXXXXXXXXXXFNHM 428
++ P F SPNLS+AK +FNS+ +ST+N P D +N FNHM
Sbjct: 49 THNP---FTSPNLSDAKRVFNSIATSTRN-PLDLRRHNALLQSYAAISTVNDSIAFFNHM 104
Query: 429 VKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLC 608
+K PAF P R TYH LL QSC+ PD+ +L +VH++LN M NNGF P++V+TD+AVRSLC
Sbjct: 105 IKTQPAFSPERSTYHILLAQSCTVPDQ-TLQSVHQVLNFMVNNGFHPDKVTTDIAVRSLC 163
Query: 609 GCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLV 788
G + A++++K+++ K++ PD YTYNFLV+ L K+R LSTV FI +M+ FG+KPDLV
Sbjct: 164 LAGHVDEAVQVMKQMALKSTVPDAYTYNFLVKCLCKSRVLSTVRGFIDEMKSFGLKPDLV 223
Query: 789 TYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVYKKM 968
T+TIMIDNV NSKNLREATRL+ L +EG+KPDCYVYNTIMKGYCMLS+G +V+ V K+M
Sbjct: 224 TFTIMIDNVANSKNLREATRLVDELEKEGFKPDCYVYNTIMKGYCMLSKGNEVVQVLKEM 283
Query: 969 QEEGVE 986
Q +GVE
Sbjct: 284 QAKGVE 289
Score = 80.1 bits (196), Expect = 1e-12
Identities = 46/176 (26%), Positives = 85/176 (48%)
Frame = +3
Query: 453 PNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHA 632
P+ +TY+ L+ C S LS V ++ M + G P+ V+ + + ++ A
Sbjct: 185 PDAYTYNFLVKCLCKS---RVLSTVRGFIDEMKSFGLKPDLVTFTIMIDNVANSKNLREA 241
Query: 633 IELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDN 812
L+ EL + +PD Y YN +++ + V +K+M+ G++PDLVTY +I
Sbjct: 242 TRLVDELEKEGFKPDCYVYNTIMKGYCMLSKGNEVVQVLKEMQAKGVEPDLVTYNTLIFG 301
Query: 813 VCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVYKKMQEEG 980
+ + +A + L ++ E G+ PD Y ++M G C + + +MQ +G
Sbjct: 302 LSKCGRVMDAKKYLWIMVEMGHFPDEVTYTSLMNGLCRKGDALGAVALLSEMQAQG 357
Score = 80.1 bits (196), Expect = 1e-12
Identities = 46/174 (26%), Positives = 91/174 (52%), Gaps = 3/174 (1%)
Frame = +3
Query: 453 PNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHA 632
P+ T+ T+++ + ++ ++L R+++ + GF P+ + ++ C +
Sbjct: 220 PDLVTF-TIMIDNVAN--SKNLREATRLVDELEKEGFKPDCYVYNTIMKGYCMLSKGNEV 276
Query: 633 IELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDN 812
++++KE+ AK +PD TYN L+ L K + ++ M E G PD VTYT +++
Sbjct: 277 VQVLKEMQAKGVEPDLVTYNTLIFGLSKCGRVMDAKKYLWIMVEMGHFPDEVTYTSLMNG 336
Query: 813 VCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYC---MLSQGGDVLGVYKK 965
+C + A LL + +G +P+ YNT++ G C +L +G ++ G+ KK
Sbjct: 337 LCRKGDALGAVALLSEMQAQGCRPNECTYNTLLHGLCKGRLLEKGLELYGLMKK 390
Score = 63.5 bits (153), Expect = 1e-07
Identities = 39/171 (22%), Positives = 75/171 (43%)
Frame = +3
Query: 447 FCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREE 626
F P+ + Y+T++ C + V ++L M G P+ V+ + + L CGR
Sbjct: 253 FKPDCYVYNTIMKGYCMLSKG---NEVVQVLKEMQAKGVEPDLVTYNTLIFGLSKCGRVM 309
Query: 627 HAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMI 806
A + + + PD TY L+ L + + +M+ G +P+ TY ++
Sbjct: 310 DAKKYLWIMVEMGHFPDEVTYTSLMNGLCRKGDALGAVALLSEMQAQGCRPNECTYNTLL 369
Query: 807 DNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVY 959
+C + L + L G++ ++G K D Y T+++ C + D V+
Sbjct: 370 HGLCKGRLLEKGLELYGLMKKDGMKLDTASYGTLVRTLCRAGRIADAYEVF 420
>ref|XP_004510105.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like isoform X1 [Cicer arietinum]
gi|502155526|ref|XP_004510106.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17670-like isoform X2 [Cicer arietinum]
Length = 468
Score = 280 bits (715), Expect = 8e-73
Identities = 150/308 (48%), Positives = 197/308 (63%), Gaps = 2/308 (0%)
Frame = +3
Query: 69 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPI-SNFPTQKKPSKKNPIKNDDSKT 245
MGKIPP+FR A S L S++ P I SNFP K ++ +
Sbjct: 1 MGKIPPSFRSALSNPNLINSSSSLPSSSKPRYFPKKIPSNFP-----GKSRKLQQESQPP 55
Query: 246 KSNVPSITFESPNLSEAKSLFNSLISSTKNLPSDSSFYNXXXXXXXXXXXXXXXXXXFNH 425
K P F+SP L EAKS+FNS++ S+ N+P+D F+N H
Sbjct: 56 K---PVSLFKSPCLQEAKSIFNSIVKSS-NVPNDFRFHNSLLQSYASVSTINDSIAFLRH 111
Query: 426 MVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSL 605
M K HP+F P++ TYH LL QSC S D +LS +H+ LNLM ++G P++V+ D+AVRSL
Sbjct: 112 MTKTHPSFTPDKSTYHILLTQSCKSTDT-TLSQIHQTLNLMVSDGVSPDKVTVDLAVRSL 170
Query: 606 CGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMR-EFGIKPD 782
C GR + A+ELIKELS+K+ PD YT+NFLV+HL K +LST+ FI +MR +FG+KPD
Sbjct: 171 CSAGRMDEAVELIKELSSKHCSPDIYTFNFLVKHLCKCLTLSTLYSFIIEMRSKFGVKPD 230
Query: 783 LVTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVYK 962
LVT+TI+IDNVCN+KNLRE L+ VL EEG+K DCY YNTIMKGYC + +G + + VY
Sbjct: 231 LVTFTILIDNVCNAKNLRETLSLMSVLDEEGFKLDCYAYNTIMKGYCKMGRGNEAIEVYN 290
Query: 963 KMQEEGVE 986
KM+E GVE
Sbjct: 291 KMKEAGVE 298
Score = 75.5 bits (184), Expect = 3e-11
Identities = 45/175 (25%), Positives = 89/175 (50%), Gaps = 1/175 (0%)
Frame = +3
Query: 453 PNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHA 632
P+ +T++ L+ C +L + I+ + + G P+ V+ + + ++C
Sbjct: 193 PDIYTFNFLVKHLCKCLTLSTLYSF--IIEMRSKFGVKPDLVTFTILIDNVCNAKNLRET 250
Query: 633 IELIKELSAKNSQPDTYTYNFLVRHLVK-NRSLSTVNCFIKDMREFGIKPDLVTYTIMID 809
+ L+ L + + D Y YN +++ K R + + K M+E G++PDL+TY +I
Sbjct: 251 LSLMSVLDEEGFKLDCYAYNTIMKGYCKMGRGNEAIEVYNK-MKEAGVEPDLITYNTLIY 309
Query: 810 NVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVYKKMQE 974
+ S + EA +LL V++E+G+ PD Y ++M G C + G++L ++E
Sbjct: 310 GLSKSGRVMEAKKLLRVMAEKGHFPDEVTYTSLMNGLC---RKGEILSAIALLEE 361
Score = 73.9 bits (180), Expect = 9e-11
Identities = 45/174 (25%), Positives = 84/174 (48%), Gaps = 1/174 (0%)
Frame = +3
Query: 453 PNRFTYHTLLVQSCSSPD-EESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEH 629
P+ T+ L+ C++ + E+LS +++++ GF + + + ++ C GR
Sbjct: 229 PDLVTFTILIDNVCNAKNLRETLS----LMSVLDEEGFKLDCYAYNTIMKGYCKMGRGNE 284
Query: 630 AIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMID 809
AIE+ ++ +PD TYN L+ L K+ + ++ M E G PD VTYT +++
Sbjct: 285 AIEVYNKMKEAGVEPDLITYNTLIYGLSKSGRVMEAKKLLRVMAEKGHFPDEVTYTSLMN 344
Query: 810 NVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVYKKMQ 971
+C + A LL + G P+ YNT++ G C + +Y +M+
Sbjct: 345 GLCRKGEILSAIALLEEMEAIGCSPNSCTYNTLLHGLCKSRLFDKAMELYGEMK 398
Score = 59.7 bits (143), Expect = 2e-06
Identities = 36/166 (21%), Positives = 70/166 (42%)
Frame = +3
Query: 462 FTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHAIEL 641
+ Y+T++ C V+ N M G P+ ++ + + L GR A +L
Sbjct: 267 YAYNTIMKGYCKMGRGNEAIEVY---NKMKEAGVEPDLITYNTLIYGLSKSGRVMEAKKL 323
Query: 642 IKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDNVCN 821
++ ++ K PD TY L+ L + + + +++M G P+ TY ++ +C
Sbjct: 324 LRVMAEKGHFPDEVTYTSLMNGLCRKGEILSAIALLEEMEAIGCSPNSCTYNTLLHGLCK 383
Query: 822 SKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVY 959
S+ +A L G + K + Y T ++ C + D V+
Sbjct: 384 SRLFDKAMELYGEMKSGCLKLEMASYATFVRALCRAGRIADAYEVF 429
Score = 59.3 bits (142), Expect = 2e-06
Identities = 54/251 (21%), Positives = 100/251 (39%), Gaps = 4/251 (1%)
Frame = +3
Query: 246 KSNVPSITFESPNLSEAKSLFNSL----ISSTKNLPSDSSFYNXXXXXXXXXXXXXXXXX 413
K ++ + T N+ AK+L +L + + D YN
Sbjct: 228 KPDLVTFTILIDNVCNAKNLRETLSLMSVLDEEGFKLDCYAYNTIMKGYCKMGRGNEAIE 287
Query: 414 XFNHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVA 593
+N M K P+ TY+TL+ S + ++L +M G P++V+
Sbjct: 288 VYNKM--KEAGVEPDLITYNTLIYGLSKSG---RVMEAKKLLRVMAEKGHFPDEVTYTSL 342
Query: 594 VRSLCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGI 773
+ LC G AI L++E+ A P++ TYN L+ L K+R +M+ +
Sbjct: 343 MNGLCRKGEILSAIALLEEMEAIGCSPNSCTYNTLLHGLCKSRLFDKAMELYGEMKSGCL 402
Query: 774 KPDLVTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLG 953
K ++ +Y + +C + + +A + E D Y+T+ L
Sbjct: 403 KLEMASYATFVRALCRAGRIADAYEVFDYAVESKSLTDVAAYSTL----------ESTLK 452
Query: 954 VYKKMQEEGVE 986
+KK +E+G++
Sbjct: 453 WFKKAKEQGLK 463
>gb|EMJ05384.1| hypothetical protein PRUPE_ppa015299mg [Prunus persica]
Length = 464
Score = 276 bits (707), Expect = 7e-72
Identities = 151/307 (49%), Positives = 202/307 (65%), Gaps = 1/307 (0%)
Frame = +3
Query: 69 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKPSKKNPIKNDDSKTK 248
MGKIPP+ R + S S L+K +S E +FP KK +KK P + + KT+
Sbjct: 1 MGKIPPSLRSSVSTS----LIKKPSSLVPNESPSHRPHHFP--KKTTKKIPPQLSE-KTR 53
Query: 249 SNVPSITFESPNLSEAKSLFNSLISSTKNLPSDSSFYNXXXXXXXXXXXXXXXXXXFNHM 428
F S NLS+AK +FNS++++TK +P D +N FNHM
Sbjct: 54 EPTFRNPFTSANLSDAKKVFNSIVTTTK-VPLDLRVHNALLQSYASISTLNDSISLFNHM 112
Query: 429 VKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLC 608
+K HP F P+R TYH LL QSC +PD+ +L VH++LN M NGF PN+V+TD+AVRSLC
Sbjct: 113 IKTHPTFSPDRSTYHVLLSQSCKAPDQ-TLKPVHQVLNFMLTNGFSPNKVTTDIAVRSLC 171
Query: 609 GCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMR-EFGIKPDL 785
A+ELIKE+S KN+ PD+YTYNFLV+ L K+ ++STV FI++ + FG+KPD+
Sbjct: 172 SSNNVGLAVELIKEMSLKNAAPDSYTYNFLVKCLCKSSAVSTVYDFIEEFKTSFGLKPDI 231
Query: 786 VTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVYKK 965
+TYTI+IDNV N +NLREATRL+ VL++EG +PDCY+YNTIMKG C L+ G + L V KK
Sbjct: 232 ITYTILIDNVTNRENLREATRLVDVLAKEGIRPDCYIYNTIMKGCCTLNLGNEALEVLKK 291
Query: 966 MQEEGVE 986
M+E GVE
Sbjct: 292 MKENGVE 298
Score = 82.8 bits (203), Expect = 2e-13
Identities = 49/174 (28%), Positives = 91/174 (52%), Gaps = 3/174 (1%)
Frame = +3
Query: 453 PNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHA 632
P+ TY T+L+ + ++ E+L R+++++ G P+ + ++ C A
Sbjct: 229 PDIITY-TILIDNVTN--RENLREATRLVDVLAKEGIRPDCYIYNTIMKGCCTLNLGNEA 285
Query: 633 IELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDN 812
+E++K++ +PD TYN L+ L K + ++ M E G PD VTYT +++
Sbjct: 286 LEVLKKMKENGVEPDLVTYNTLIFGLSKCGRVVEAKKYLGVMVEMGHFPDAVTYTSLMNG 345
Query: 813 VCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYC---MLSQGGDVLGVYKK 965
+C ++ A LL + E+G +P+ YNT++ G C +L +G D+ GV K+
Sbjct: 346 LCRKGDVLGALGLLEEMQEKGCEPNVCTYNTLLHGLCKAKLLEKGLDLYGVMKE 399
Score = 71.2 bits (173), Expect = 6e-10
Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 1/170 (0%)
Frame = +3
Query: 453 PNRFTYHTLLVQSCS-SPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEH 629
P+ + Y+T++ C+ + E+L +L M NG P+ V+ + + L CGR
Sbjct: 264 PDCYIYNTIMKGCCTLNLGNEALE----VLKKMKENGVEPDLVTYNTLIFGLSKCGRVVE 319
Query: 630 AIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMID 809
A + + + PD TY L+ L + + +++M+E G +P++ TY ++
Sbjct: 320 AKKYLGVMVEMGHFPDAVTYTSLMNGLCRKGDVLGALGLLEEMQEKGCEPNVCTYNTLLH 379
Query: 810 NVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVY 959
+C +K L + L GV+ E G K D Y T+++ C + D V+
Sbjct: 380 GLCKAKLLEKGLDLYGVMKECGMKLDTASYATLVRALCREGRVADAYEVF 429
>ref|XP_002884075.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297329915|gb|EFH60334.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 462
Score = 273 bits (699), Expect = 6e-71
Identities = 148/309 (47%), Positives = 203/309 (65%), Gaps = 3/309 (0%)
Frame = +3
Query: 69 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKPSKKNPIKNDDSKTK 248
MGK+P +FR P + L+K T + P+P +F + + + ++ K ++
Sbjct: 1 MGKVPSSFRAM----PANLLVKKPTPSP-----PAPPRDF--RNRAAVRDSTKLPENTQA 49
Query: 249 SNVPSIT--FESPNLSEAKSLFNSLISSTKNLPSDSSFYNXXXXXXXXXXXXXXXXXXFN 422
PS+ F+SPNLS+AKSLFNS I++T +P D F+N F
Sbjct: 50 PREPSLRNPFKSPNLSDAKSLFNS-IAATSRIPLDLKFHNSVLQSYASIAAVDDTVKLFQ 108
Query: 423 HMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRS 602
H++K P F P R T+ LL +C +PD S+SNVHR+LNLM NNG P+QV+TD+AVRS
Sbjct: 109 HILKSQPNFRPGRSTFLILLSHACRAPDS-SISNVHRVLNLMVNNGLEPDQVTTDIAVRS 167
Query: 603 LCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMRE-FGIKP 779
LC GR + A +L+KEL+ K+S PDTYTYNFL++HL K + L V F+ +MR+ F +KP
Sbjct: 168 LCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKP 227
Query: 780 DLVTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVY 959
DLV++TI+IDNVCNSKNLREA L+ L G+KPDC++YNTIMKG+C LS+G + +GVY
Sbjct: 228 DLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAIGVY 287
Query: 960 KKMQEEGVE 986
KKM+EEGVE
Sbjct: 288 KKMKEEGVE 296
Score = 82.4 bits (202), Expect = 2e-13
Identities = 65/272 (23%), Positives = 115/272 (42%)
Frame = +3
Query: 171 SPISNFPTQKKPSKKNPIKNDDSKTKSNVPSITFESPNLSEAKSLFNSLISSTKNLPSDS 350
S ISN N ++ D T V S+ E+ + EAK L L + K+ P D+
Sbjct: 137 SSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLC-ETGRVDEAKDLMKEL--TEKHSPPDT 193
Query: 351 SFYNXXXXXXXXXXXXXXXXXXFNHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVH 530
YN + M P+ ++ L+ C+S ++L
Sbjct: 194 YTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVK-PDLVSFTILIDNVCNS---KNLREAM 249
Query: 531 RILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHL 710
+++ + N GF P+ + ++ C + AI + K++ + +PD TYN L+ L
Sbjct: 250 YLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAIGVYKKMKEEGVEPDQITYNTLIYGL 309
Query: 711 VKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDC 890
K+ + ++K M + G +PD TYT +++ +C A LL + G P+
Sbjct: 310 SKSGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPND 369
Query: 891 YVYNTIMKGYCMLSQGGDVLGVYKKMQEEGVE 986
YNT++ G C + +Y+ M+ GV+
Sbjct: 370 CTYNTLLHGLCKARLMDKGMELYELMKSSGVK 401
Score = 58.2 bits (139), Expect = 5e-06
Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 1/173 (0%)
Frame = +3
Query: 447 FCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREE 626
F P+ F Y+T++ C+ V++ M G P+Q++ + + L GR E
Sbjct: 260 FKPDCFLYNTIMKGFCTLSKGSEAIGVYK---KMKEEGVEPDQITYNTLIYGLSKSGRVE 316
Query: 627 HAIELIKELSAKNSQPDTYTYNFLVRHLV-KNRSLSTVNCFIKDMREFGIKPDLVTYTIM 803
A +K + +PDT TY L+ + K SL ++ +++M G P+ TY +
Sbjct: 317 EARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALS-LLEEMEARGCAPNDCTYNTL 375
Query: 804 IDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVYK 962
+ +C ++ + + L ++ G K + Y T+++ L + G V Y+
Sbjct: 376 LHGLCKARLMDKGMELYELMKSSGVKLETNGYATLVRS---LVKSGKVAEAYE 425
>ref|XP_006409268.1| hypothetical protein EUTSA_v10022683mg [Eutrema salsugineum]
gi|557110430|gb|ESQ50721.1| hypothetical protein
EUTSA_v10022683mg [Eutrema salsugineum]
Length = 462
Score = 273 bits (697), Expect = 1e-70
Identities = 153/307 (49%), Positives = 198/307 (64%), Gaps = 1/307 (0%)
Frame = +3
Query: 69 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKPSKKNPIKNDDSKTK 248
MGKIP +FR S + L+K TS L P N +++ K + + S+
Sbjct: 1 MGKIPSSFRSMTS----THLVKKPTSCPLAP--PRDPRNRIARRESVKISHHTDQVSREP 54
Query: 249 SNVPSITFESPNLSEAKSLFNSLISSTKNLPSDSSFYNXXXXXXXXXXXXXXXXXXFNHM 428
P F++P+LS+AKSLFNS I++T +P D F+N F H+
Sbjct: 55 LRNP---FKTPDLSDAKSLFNS-IAATSRIPLDLKFHNSVLQSYASIAAVDDTVKLFLHI 110
Query: 429 VKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLC 608
+K P F P T+H LL +C +PD SLSNVH +LNLM NNG PNQV+TD+AVRSLC
Sbjct: 111 LKSQPGFSPEHSTFHILLSHACRAPDS-SLSNVHLVLNLMVNNGVAPNQVTTDIAVRSLC 169
Query: 609 GCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMRE-FGIKPDL 785
GR A++LIKELS +S PDTYTYNFL++HL K SL V FI +M+E F +KPDL
Sbjct: 170 ESGRISEAMDLIKELSKNHSPPDTYTYNFLLKHLCKCGSLDVVYEFIDEMKETFEVKPDL 229
Query: 786 VTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVYKK 965
V+YTI+IDNVCNSKNLREA RL+ L + G+KPDC++YNTIMKG+C LS+G + + VYKK
Sbjct: 230 VSYTILIDNVCNSKNLREAMRLVSALGDAGFKPDCFLYNTIMKGFCTLSKGSEAIIVYKK 289
Query: 966 MQEEGVE 986
M+EEGVE
Sbjct: 290 MKEEGVE 296
Score = 83.6 bits (205), Expect = 1e-13
Identities = 60/238 (25%), Positives = 105/238 (44%)
Frame = +3
Query: 273 ESPNLSEAKSLFNSLISSTKNLPSDSSFYNXXXXXXXXXXXXXXXXXXFNHMVKKHPAFC 452
ES +SEA L L S + P D+ YN + M K+
Sbjct: 170 ESGRISEAMDLIKEL--SKNHSPPDTYTYNFLLKHLCKCGSLDVVYEFIDEM-KETFEVK 226
Query: 453 PNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHA 632
P+ +Y L+ C+S ++L R+++ + + GF P+ + ++ C + A
Sbjct: 227 PDLVSYTILIDNVCNS---KNLREAMRLVSALGDAGFKPDCFLYNTIMKGFCTLSKGSEA 283
Query: 633 IELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDN 812
I + K++ + +PD TYN L+ L K+ + +++ M E G +PD VTYT +++
Sbjct: 284 IIVYKKMKEEGVEPDRITYNTLIFGLSKSGRVEEARKYLQTMVEAGYEPDAVTYTSLMNG 343
Query: 813 VCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVYKKMQEEGVE 986
+C A LL + G P+ YNT++ G C + +Y M+ GV+
Sbjct: 344 MCRKGASLGALSLLEEMEARGCAPNACTYNTLLYGLCKARLMDKGIELYGLMKSNGVK 401
Score = 60.8 bits (146), Expect = 8e-07
Identities = 38/173 (21%), Positives = 80/173 (46%), Gaps = 1/173 (0%)
Frame = +3
Query: 447 FCPNRFTYHTLLVQSCS-SPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGRE 623
F P+ F Y+T++ C+ S E++ + M G P++++ + + L GR
Sbjct: 260 FKPDCFLYNTIMKGFCTLSKGSEAII----VYKKMKEEGVEPDRITYNTLIFGLSKSGRV 315
Query: 624 EHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIM 803
E A + ++ + +PD TY L+ + + + +++M G P+ TY +
Sbjct: 316 EEARKYLQTMVEAGYEPDAVTYTSLMNGMCRKGASLGALSLLEEMEARGCAPNACTYNTL 375
Query: 804 IDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVYK 962
+ +C ++ + + L G++ G K + Y T+++G L + G V Y+
Sbjct: 376 LYGLCKARLMDKGIELYGLMKSNGVKLESSAYATLVRG---LVRSGKVAEAYE 425
>ref|NP_973481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251569|gb|AEC06663.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 349
Score = 272 bits (695), Expect = 2e-70
Identities = 149/314 (47%), Positives = 201/314 (64%), Gaps = 8/314 (2%)
Frame = +3
Query: 69 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKPSKKNPIKNDDSKTK 248
MGK+P +FR P + L++ T + P+P +F + + D +K
Sbjct: 1 MGKVPSSFR----SMPANLLVRKTTPSP-----PAPPRDF------RNRTAVGGDSAKLP 45
Query: 249 SNV-----PSIT--FESPNLSEAKSLFNSLISSTKNLPSDSSFYNXXXXXXXXXXXXXXX 407
N PS+ F+SPNLS+AKSLFNS I++T +P D F+N
Sbjct: 46 QNTQAPREPSLRNPFKSPNLSDAKSLFNS-IAATSRIPLDLKFHNSVLQSYGSIAVVNDT 104
Query: 408 XXXFNHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTD 587
F H++K P F P R T+ LL +C +PD S+SNVHR+LNLM NNG P+QV+TD
Sbjct: 105 VKLFQHILKSQPNFRPGRSTFLILLSHACRAPDS-SISNVHRVLNLMVNNGLEPDQVTTD 163
Query: 588 VAVRSLCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMRE- 764
+AVRSLC GR + A +L+KEL+ K+S PDTYTYNFL++HL K + L V F+ +MR+
Sbjct: 164 IAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDD 223
Query: 765 FGIKPDLVTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGD 944
F +KPDLV++TI+IDNVCNSKNLREA L+ L G+KPDC++YNTIMKG+C LS+G +
Sbjct: 224 FDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSE 283
Query: 945 VLGVYKKMQEEGVE 986
+GVYKKM+EEGVE
Sbjct: 284 AVGVYKKMKEEGVE 297
Score = 72.8 bits (177), Expect = 2e-10
Identities = 44/167 (26%), Positives = 80/167 (47%), Gaps = 1/167 (0%)
Frame = +3
Query: 426 MVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNN-GFPPNQVSTDVAVRS 602
+ +KH P+ +TY+ LL C D L V+ ++ M ++ P+ VS + + +
Sbjct: 185 LTEKHSP--PDTYTYNFLLKHLCKCKD---LHVVYEFVDEMRDDFDVKPDLVSFTILIDN 239
Query: 603 LCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPD 782
+C A+ L+ +L +PD + YN +++ S K M+E G++PD
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD 299
Query: 783 LVTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYC 923
+TY +I + + + EA L + + GY+PD Y ++M G C
Sbjct: 300 QITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Score = 60.8 bits (146), Expect = 8e-07
Identities = 50/216 (23%), Positives = 91/216 (42%)
Frame = +3
Query: 171 SPISNFPTQKKPSKKNPIKNDDSKTKSNVPSITFESPNLSEAKSLFNSLISSTKNLPSDS 350
S ISN N ++ D T V S+ E+ + EAK L L + K+ P D+
Sbjct: 138 SSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLC-ETGRVDEAKDLMKEL--TEKHSPPDT 194
Query: 351 SFYNXXXXXXXXXXXXXXXXXXFNHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVH 530
YN + M P+ ++ L+ C+S ++L
Sbjct: 195 YTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVK-PDLVSFTILIDNVCNS---KNLREAM 250
Query: 531 RILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHL 710
+++ + N GF P+ + ++ C + A+ + K++ + +PD TYN L+ L
Sbjct: 251 YLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGL 310
Query: 711 VKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDNVC 818
K + ++K M + G +PD TYT +++ +C
Sbjct: 311 SKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
>ref|NP_565422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75146596|sp|Q84J71.1|PP161_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g17670 gi|28393395|gb|AAO42121.1| unknown protein
[Arabidopsis thaliana] gi|28973597|gb|AAO64123.1|
unknown protein [Arabidopsis thaliana]
gi|330251570|gb|AEC06664.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 463
Score = 272 bits (695), Expect = 2e-70
Identities = 149/314 (47%), Positives = 201/314 (64%), Gaps = 8/314 (2%)
Frame = +3
Query: 69 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKPSKKNPIKNDDSKTK 248
MGK+P +FR P + L++ T + P+P +F + + D +K
Sbjct: 1 MGKVPSSFR----SMPANLLVRKTTPSP-----PAPPRDF------RNRTAVGGDSAKLP 45
Query: 249 SNV-----PSIT--FESPNLSEAKSLFNSLISSTKNLPSDSSFYNXXXXXXXXXXXXXXX 407
N PS+ F+SPNLS+AKSLFNS I++T +P D F+N
Sbjct: 46 QNTQAPREPSLRNPFKSPNLSDAKSLFNS-IAATSRIPLDLKFHNSVLQSYGSIAVVNDT 104
Query: 408 XXXFNHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTD 587
F H++K P F P R T+ LL +C +PD S+SNVHR+LNLM NNG P+QV+TD
Sbjct: 105 VKLFQHILKSQPNFRPGRSTFLILLSHACRAPDS-SISNVHRVLNLMVNNGLEPDQVTTD 163
Query: 588 VAVRSLCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMRE- 764
+AVRSLC GR + A +L+KEL+ K+S PDTYTYNFL++HL K + L V F+ +MR+
Sbjct: 164 IAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDD 223
Query: 765 FGIKPDLVTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGD 944
F +KPDLV++TI+IDNVCNSKNLREA L+ L G+KPDC++YNTIMKG+C LS+G +
Sbjct: 224 FDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSE 283
Query: 945 VLGVYKKMQEEGVE 986
+GVYKKM+EEGVE
Sbjct: 284 AVGVYKKMKEEGVE 297
Score = 80.9 bits (198), Expect = 7e-13
Identities = 64/272 (23%), Positives = 114/272 (41%)
Frame = +3
Query: 171 SPISNFPTQKKPSKKNPIKNDDSKTKSNVPSITFESPNLSEAKSLFNSLISSTKNLPSDS 350
S ISN N ++ D T V S+ E+ + EAK L L + K+ P D+
Sbjct: 138 SSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLC-ETGRVDEAKDLMKEL--TEKHSPPDT 194
Query: 351 SFYNXXXXXXXXXXXXXXXXXXFNHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVH 530
YN + M P+ ++ L+ C+S ++L
Sbjct: 195 YTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVK-PDLVSFTILIDNVCNS---KNLREAM 250
Query: 531 RILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHL 710
+++ + N GF P+ + ++ C + A+ + K++ + +PD TYN L+ L
Sbjct: 251 YLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGL 310
Query: 711 VKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDC 890
K + ++K M + G +PD TYT +++ +C A LL + G P+
Sbjct: 311 SKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPND 370
Query: 891 YVYNTIMKGYCMLSQGGDVLGVYKKMQEEGVE 986
YNT++ G C + +Y+ M+ GV+
Sbjct: 371 CTYNTLLHGLCKARLMDKGMELYEMMKSSGVK 402
Score = 58.2 bits (139), Expect = 5e-06
Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 1/173 (0%)
Frame = +3
Query: 447 FCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREE 626
F P+ F Y+T++ C+ V++ M G P+Q++ + + L GR E
Sbjct: 261 FKPDCFLYNTIMKGFCTLSKGSEAVGVYK---KMKEEGVEPDQITYNTLIFGLSKAGRVE 317
Query: 627 HAIELIKELSAKNSQPDTYTYNFLVRHLV-KNRSLSTVNCFIKDMREFGIKPDLVTYTIM 803
A +K + +PDT TY L+ + K SL ++ +++M G P+ TY +
Sbjct: 318 EARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALS-LLEEMEARGCAPNDCTYNTL 376
Query: 804 IDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVYK 962
+ +C ++ + + L ++ G K + Y T+++ L + G V Y+
Sbjct: 377 LHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRS---LVKSGKVAEAYE 426
>gb|AAM62704.1| unknown [Arabidopsis thaliana]
Length = 463
Score = 271 bits (693), Expect = 3e-70
Identities = 149/314 (47%), Positives = 201/314 (64%), Gaps = 8/314 (2%)
Frame = +3
Query: 69 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKPSKKNPIKNDDSKTK 248
MGK+P +FR P + L++ T + P+P +F + + D +K
Sbjct: 1 MGKVPSSFRSI----PANLLVRKTTPSP-----PAPPRDF------RNRTAVGGDSAKLP 45
Query: 249 SNV-----PSIT--FESPNLSEAKSLFNSLISSTKNLPSDSSFYNXXXXXXXXXXXXXXX 407
N PS+ F+SPNLS+AKSLFNS I++T +P D F+N
Sbjct: 46 HNTQAPREPSLRNPFKSPNLSDAKSLFNS-IAATSRIPLDLKFHNSVLQSYASIAVVDDT 104
Query: 408 XXXFNHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTD 587
F H++K P F P R T+ LL +C +PD S+SNVHR+LNLM NNG P+QV+TD
Sbjct: 105 VKFFQHIMKSQPNFRPGRSTFLILLSHACRAPDS-SISNVHRVLNLMVNNGLEPDQVTTD 163
Query: 588 VAVRSLCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMRE- 764
+AVRSLC GR + A +L+KEL+ K+S PDTYTYNFL++HL K + L V F+ +MR+
Sbjct: 164 IAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDD 223
Query: 765 FGIKPDLVTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGD 944
F +KPDLV++TI+IDNVCNSKNLREA L+ L G+KPDC++YNTIMKG+C LS+G +
Sbjct: 224 FDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSE 283
Query: 945 VLGVYKKMQEEGVE 986
+GVYKKM+EEGVE
Sbjct: 284 AVGVYKKMKEEGVE 297
Score = 80.9 bits (198), Expect = 7e-13
Identities = 64/272 (23%), Positives = 114/272 (41%)
Frame = +3
Query: 171 SPISNFPTQKKPSKKNPIKNDDSKTKSNVPSITFESPNLSEAKSLFNSLISSTKNLPSDS 350
S ISN N ++ D T V S+ E+ + EAK L L + K+ P D+
Sbjct: 138 SSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLC-ETGRVDEAKDLMKEL--TEKHSPPDT 194
Query: 351 SFYNXXXXXXXXXXXXXXXXXXFNHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVH 530
YN + M P+ ++ L+ C+S ++L
Sbjct: 195 YTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVK-PDLVSFTILIDNVCNS---KNLREAM 250
Query: 531 RILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHL 710
+++ + N GF P+ + ++ C + A+ + K++ + +PD TYN L+ L
Sbjct: 251 YLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGL 310
Query: 711 VKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDC 890
K + ++K M + G +PD TYT +++ +C A LL + G P+
Sbjct: 311 SKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPND 370
Query: 891 YVYNTIMKGYCMLSQGGDVLGVYKKMQEEGVE 986
YNT++ G C + +Y+ M+ GV+
Sbjct: 371 CTYNTLLHGLCKARLMDKGMELYEMMKSSGVK 402
Score = 58.2 bits (139), Expect = 5e-06
Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 1/173 (0%)
Frame = +3
Query: 447 FCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREE 626
F P+ F Y+T++ C+ V++ M G P+Q++ + + L GR E
Sbjct: 261 FKPDCFLYNTIMKGFCTLSKGSEAVGVYK---KMKEEGVEPDQITYNTLIFGLSKAGRVE 317
Query: 627 HAIELIKELSAKNSQPDTYTYNFLVRHLV-KNRSLSTVNCFIKDMREFGIKPDLVTYTIM 803
A +K + +PDT TY L+ + K SL ++ +++M G P+ TY +
Sbjct: 318 EARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALS-LLEEMEARGCAPNDCTYNTL 376
Query: 804 IDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVYK 962
+ +C ++ + + L ++ G K + Y T+++ L + G V Y+
Sbjct: 377 LHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRS---LVKSGKVAEAYE 426
>ref|XP_002306437.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222855886|gb|EEE93433.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 462
Score = 270 bits (691), Expect = 5e-70
Identities = 155/308 (50%), Positives = 204/308 (66%), Gaps = 2/308 (0%)
Frame = +3
Query: 69 MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKPSKKNPIKNDDSKTK 248
MGK PP+FR A S ST L NT + Q+Q FP KK +KKN K +++T
Sbjct: 1 MGKFPPSFRSAIS----STSLIKNTPSQQQQQP----HYFP--KKLTKKNSPKPHETETP 50
Query: 249 SNVPSITFESPNLSEAKSLFNSLISSTKN-LPSDSSFYNXXXXXXXXXXXXXXXXXXFNH 425
S+ F++ +L+EAKSLFNS IS+TK L + +N +H
Sbjct: 51 PPHKSL-FKTSSLNEAKSLFNSFISTTKAPLLDNLRLHNSFLQSYTSISTLDDSISLLDH 109
Query: 426 MVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSL 605
MVK P+ P+R TYH LL QSC PD SLS+ ++LNLM N GF PNQ + DVA+RSL
Sbjct: 110 MVKTLPSLSPDRSTYHVLLSQSCREPDS-SLSSAQKVLNLMINKGFKPNQFTVDVAIRSL 168
Query: 606 CGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMRE-FGIKPD 782
C GR + AI L+KE S+K+S+PDT+TYNFLV+ L K+R ++V FI +M+ F IKPD
Sbjct: 169 CSAGRVDDAILLVKEFSSKHSKPDTFTYNFLVKCLCKSRIFNSVYSFIDEMKSSFDIKPD 228
Query: 783 LVTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVYK 962
LVTYTI+IDNVCN+KN+REA RL+ VL E G KPD ++YNTIMKGYC+L++G + + +YK
Sbjct: 229 LVTYTILIDNVCNAKNIREADRLVAVLKECGLKPDAFLYNTIMKGYCLLNKGIEAVRIYK 288
Query: 963 KMQEEGVE 986
+M+EEGVE
Sbjct: 289 QMKEEGVE 296
Score = 80.5 bits (197), Expect = 9e-13
Identities = 47/174 (27%), Positives = 88/174 (50%), Gaps = 3/174 (1%)
Frame = +3
Query: 453 PNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHA 632
P+ TY L+ C++ +++ R++ ++ G P+ + ++ C + A
Sbjct: 227 PDLVTYTILIDNVCNA---KNIREADRLVAVLKECGLKPDAFLYNTIMKGYCLLNKGIEA 283
Query: 633 IELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDN 812
+ + K++ + +PD TYN L+ L K +S +K M E G PD VTYT +++
Sbjct: 284 VRIYKQMKEEGVEPDLVTYNTLIFGLSKCGRVSEAKKLLKIMVESGHFPDAVTYTSLMNG 343
Query: 813 VCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYC---MLSQGGDVLGVYKK 965
+C ++ A LL + +G P+ YNT++ G+C L++G ++ GV KK
Sbjct: 344 MCREGDVLGAAALLEEMELKGCSPNSCTYNTLLHGFCKGRRLNKGVELYGVIKK 397
Score = 65.9 bits (159), Expect = 2e-08
Identities = 41/165 (24%), Positives = 71/165 (43%)
Frame = +3
Query: 429 VKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLC 608
V K P+ F Y+T++ C + + V RI M G P+ V+ + + L
Sbjct: 254 VLKECGLKPDAFLYNTIMKGYCLL--NKGIEAV-RIYKQMKEEGVEPDLVTYNTLIFGLS 310
Query: 609 GCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLV 788
CGR A +L+K + PD TY L+ + + + +++M G P+
Sbjct: 311 KCGRVSEAKKLLKIMVESGHFPDAVTYTSLMNGMCREGDVLGAAALLEEMELKGCSPNSC 370
Query: 789 TYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYC 923
TY ++ C + L + L GV+ + G K + Y T ++ C
Sbjct: 371 TYNTLLHGFCKGRRLNKGVELYGVIKKGGMKLETASYATFVRALC 415
>gb|EXC35267.1| hypothetical protein L484_026589 [Morus notabilis]
Length = 444
Score = 268 bits (685), Expect = 2e-69
Identities = 145/276 (52%), Positives = 182/276 (65%), Gaps = 1/276 (0%)
Frame = +3
Query: 162 QIPSPISNFPTQKKPSKKNPIKNDDSKTKSNVPSITFESPNLSEAKSLFNSLISSTKNLP 341
+ P P S P K PS P + F+SP+LS AKSLFNS ISST N
Sbjct: 8 KFPKPAS-IPQPKTPSSLIPSQKPSKTPLIPSSKFNFKSPDLSAAKSLFNS-ISSTVN-- 63
Query: 342 SDSSFYNXXXXXXXXXXXXXXXXXXFNHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLS 521
D + N HM+K HPAF P+R TYH LL SC++PD SLS
Sbjct: 64 PDLNHTNSFLKSYASISTVDDSISLLRHMIKTHPAFSPDRSTYHILLTHSCAAPDP-SLS 122
Query: 522 NVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHAIELIKELSAKNSQPDTYTYNFLV 701
VH +LNLM++ GF P++V+ D+AVR+LC G+ +HA++L E+S ++S PD+YTYNFLV
Sbjct: 123 PVHGVLNLMSSAGFSPDKVTADIAVRALCYAGKIDHAVQLFDEMSLRHSVPDSYTYNFLV 182
Query: 702 RHLVKNRSLSTVNCFIKDMRE-FGIKPDLVTYTIMIDNVCNSKNLREATRLLGVLSEEGY 878
+ L K R LST+ FI R FG+KPDLVTYTI+IDNVCNSKNLRE TRL+ VL EEG+
Sbjct: 183 KCLCKCRPLSTIYEFIDKTRSSFGLKPDLVTYTIIIDNVCNSKNLREITRLVAVLGEEGF 242
Query: 879 KPDCYVYNTIMKGYCMLSQGGDVLGVYKKMQEEGVE 986
KPDC++YNTIMKGYCMLS+G + + VY KM+E GVE
Sbjct: 243 KPDCFLYNTIMKGYCMLSRGSEAIEVYNKMKENGVE 278
Score = 96.3 bits (238), Expect = 2e-17
Identities = 51/178 (28%), Positives = 93/178 (52%)
Frame = +3
Query: 453 PNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHA 632
P+ TY ++ C+S ++L + R++ ++ GF P+ + ++ C R A
Sbjct: 209 PDLVTYTIIIDNVCNS---KNLREITRLVAVLGEEGFKPDCFLYNTIMKGYCMLSRGSEA 265
Query: 633 IELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDN 812
IE+ ++ +PDT TYN L+ L K+ ++K M E G PD+VTYT +++
Sbjct: 266 IEVYNKMKENGVEPDTVTYNTLIFGLAKSGRAKEARKYLKIMAEKGHSPDVVTYTSLMNG 325
Query: 813 VCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVYKKMQEEGVE 986
+C +++ A LL + E G +P+ YNT++ G+C + +Y+ M+E G+E
Sbjct: 326 LCRERDVLGAYALLEEMKERGCEPNECTYNTLLHGFCKAKMVERGVELYRVMKERGME 383
Score = 78.6 bits (192), Expect = 4e-12
Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 1/172 (0%)
Frame = +3
Query: 447 FCPNRFTYHTLLVQSCS-SPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGRE 623
F P+ F Y+T++ C S E++ + N M NG P+ V+ + + L GR
Sbjct: 242 FKPDCFLYNTIMKGYCMLSRGSEAIE----VYNKMKENGVEPDTVTYNTLIFGLAKSGRA 297
Query: 624 EHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIM 803
+ A + +K ++ K PD TY L+ L + R + +++M+E G +P+ TY +
Sbjct: 298 KEARKYLKIMAEKGHSPDVVTYTSLMNGLCRERDVLGAYALLEEMKERGCEPNECTYNTL 357
Query: 804 IDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVY 959
+ C +K + L V+ E G + D Y T+++ +C + + V+
Sbjct: 358 LHGFCKAKMVERGVELYRVMKERGMELDTAAYATLVRVFCRRGEVAEAYEVF 409
>ref|XP_003595941.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484989|gb|AES66192.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 472
Score = 267 bits (683), Expect = 4e-69
Identities = 146/308 (47%), Positives = 200/308 (64%), Gaps = 3/308 (0%)
Frame = +3
Query: 72 GKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQ-KKPSKKNPIKNDDSKTK 248
GKIPP+FR A S L + S++L P P +FP + +KP +K + S+++
Sbjct: 18 GKIPPSFRSALSNPNLI-----HRSSSLIPSSPKP-HHFPNKTRKPHQKQ--QQSQSQSQ 69
Query: 249 SNVPSITFESPNLSEAKSLFNSLISSTKNLPSDSSFYNXXXXXXXXXXXXXXXXXXFNHM 428
S P F+SPNL EAKS+FNS ++S+ N P DS F+N HM
Sbjct: 70 SPKPVSVFKSPNLQEAKSIFNSFVNSS-NAPIDSRFHNSLLQSYASISTINDSIAFLRHM 128
Query: 429 VKKHPAFCPNRFTYHTLLVQSCSSPDEE--SLSNVHRILNLMTNNGFPPNQVSTDVAVRS 602
K HP+F P++ TYH LL C S D + +LS +H+ LNLM ++G P++ + D+AVRS
Sbjct: 129 TKTHPSFSPDKSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSDGISPDKGTVDLAVRS 188
Query: 603 LCGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPD 782
LC R + A+ELIKELS+K+ PD Y+YNFLV++L K+R+LS V P+
Sbjct: 189 LCTADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVY------------PN 236
Query: 783 LVTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVYK 962
LVTYTI+IDNVCN+KNLREATRL+ +L EEG+KPDC++YNTIMKGYCMLS+G + + VY
Sbjct: 237 LVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYN 296
Query: 963 KMQEEGVE 986
+M+E+GVE
Sbjct: 297 RMKEKGVE 304
Score = 87.0 bits (214), Expect = 1e-14
Identities = 49/178 (27%), Positives = 86/178 (48%)
Frame = +3
Query: 453 PNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHA 632
PN TY L+ C++ ++L R+++++ GF P+ + ++ C R A
Sbjct: 235 PNLVTYTILIDNVCNT---KNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEA 291
Query: 633 IELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDN 812
IE+ + K +PD TYN L+ L K+ +S ++ M E G PD VTYT +++
Sbjct: 292 IEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNG 351
Query: 813 VCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVYKKMQEEGVE 986
+C A LL + +G P+ YNT++ G C + +Y M+ +G++
Sbjct: 352 MCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLK 409
Score = 70.9 bits (172), Expect = 7e-10
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 1/178 (0%)
Frame = +3
Query: 429 VKKHPAFCPNRFTYHTLLVQSCS-SPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSL 605
+ + F P+ F Y+T++ C S E++ + N M G P+ ++ + + L
Sbjct: 262 ILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIE----VYNRMKEKGVEPDLITYNTLIFGL 317
Query: 606 CGCGREEHAIELIKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDL 785
GR A +L++ ++ K PD TY L+ + + +++M G P+
Sbjct: 318 SKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNT 377
Query: 786 VTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGDVLGVY 959
TY ++ +C S+ +A L G + +G K D Y T ++ C + + D V+
Sbjct: 378 CTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYATFVRALCSVGRVADAYEVF 435
Score = 64.3 bits (155), Expect = 7e-08
Identities = 50/209 (23%), Positives = 85/209 (40%)
Frame = +3
Query: 282 NLSEAKSLFNSLISSTKNLPSDSSFYNXXXXXXXXXXXXXXXXXXFNHMVKKHPAFCPNR 461
NL EA L + L + D YN +N M +K P+
Sbjct: 252 NLREATRLVDIL--EEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKGVE--PDL 307
Query: 462 FTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLCGCGREEHAIEL 641
TY+TL+ S +S ++L +M G P++V+ + +C G A+ L
Sbjct: 308 ITYNTLIFGLSKSG---RVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALAL 364
Query: 642 IKELSAKNSQPDTYTYNFLVRHLVKNRSLSTVNCFIKDMREFGIKPDLVTYTIMIDNVCN 821
++E+ K P+T TYN L+ L K+R M+ G+K D+ +Y + +C+
Sbjct: 365 LEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYATFVRALCS 424
Query: 822 SKNLREATRLLGVLSEEGYKPDCYVYNTI 908
+ +A + E D Y+T+
Sbjct: 425 VGRVADAYEVFDYAVESKSLSDVAAYSTL 453