BLASTX nr result

ID: Rehmannia25_contig00005907 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00005907
         (451 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ03004.1| hypothetical protein PRUPE_ppa001167mg [Prunus pe...    56   6e-06
ref|XP_002313861.2| hypothetical protein POPTR_0009s10240g [Popu...    55   9e-06
ref|XP_002313860.1| predicted protein [Populus trichocarpa]            55   9e-06

>gb|EMJ03004.1| hypothetical protein PRUPE_ppa001167mg [Prunus persica]
          Length = 890

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/62 (48%), Positives = 42/62 (67%), Gaps = 6/62 (9%)
 Frame = +2

Query: 2   LGKQLKALGSAKELSVVDKVLSITDNT------KSFKQRSSLRDQMLCEDDTQVKNLESP 163
           LGKQLKAL + +E  + DKV S T +T       +  +RSSLRDQML ED+T+V +++SP
Sbjct: 745 LGKQLKALATPREAELFDKVFSTTTSTAANASDNNLNRRSSLRDQMLAEDNTRVGDVKSP 804

Query: 164 TD 169
            +
Sbjct: 805 KE 806


>ref|XP_002313861.2| hypothetical protein POPTR_0009s10240g [Populus trichocarpa]
            gi|550331442|gb|EEE87816.2| hypothetical protein
            POPTR_0009s10240g [Populus trichocarpa]
          Length = 889

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
 Frame = +2

Query: 2    LGKQLKALGSAKELSVVDKVLSITD------NTKSFKQRSSLRDQMLCEDDTQVKNLESP 163
            LGKQLKAL S +E ++ DKV + T       N K+  +R SLRDQM+ ED ++   L SP
Sbjct: 750  LGKQLKALASPREAALFDKVFTTTGATAAATNIKNMNRRFSLRDQMIAEDRSKAIILRSP 809

Query: 164  TDGQIATAKANIMENENKRANAGALV 241
            T+     +  N  +N N+  +  ALV
Sbjct: 810  TE-DAQKSSLNHTDNGNELISPNALV 834


>ref|XP_002313860.1| predicted protein [Populus trichocarpa]
          Length = 284

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
 Frame = +2

Query: 2   LGKQLKALGSAKELSVVDKVLSITD------NTKSFKQRSSLRDQMLCEDDTQVKNLESP 163
           LGKQLKAL S +E ++ DKV + T       N K+  +R SLRDQM+ ED ++   L SP
Sbjct: 145 LGKQLKALASPREAALFDKVFTTTGATAAATNIKNMNRRFSLRDQMIAEDRSKAIILRSP 204

Query: 164 TDGQIATAKANIMENENKRANAGALV 241
           T+     +  N  +N N+  +  ALV
Sbjct: 205 TE-DAQKSSLNHTDNGNELISPNALV 229


Top